|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022618 ID=TCONS_00022618|Name=TCONS_00022618|organism=Clytia hemisphaerica|type=transcript|length=804bp
TCGAAATTTCATCCTGCGCACATTTCAGGTTGTCAAAGCCACATGGTGGT
GTGTCCGCAATAGGTTCTCCGTGAAGCCATTGTGGTTCTAAATCCGTATC
GCTTTTAGTCAAATAAAATCGGTTTTCTTCGGCTTGATTGGCGTTTGAGC
AGTCGACGGTATCGGCATTGTCCTTTGATTCGAAGACAAACACACGCTCA
GGTTTGAAGATGTTTCTCAAGTCTAATTTCAGTTTTTGTTCATCGAATTG
GAATTGGCGAACTTCGAATAATACTTGGACGTCCGCCTTGCAGTTGACTA
TAAACGGCGAACCGCTTATACTCTCGTGACGAGTGTTGAGGATATTTTGG
ATAATATCAGATCCATTGGTTACACTGTATCCTTTGGATAACGTTTTGTT
CAATCCGTGAGCGTACAACATGACTGCATCATACAGTTGGTGAGCTTCTG
GTGGTGGCTGAATGAGGAAGTGAAGAAACAAAATGAGTTTGATGACACTT
TTTGAACACAAAATTCGTTCAACAAAGGGAAATAATTCCATGATTGCGAT
CGGTGACAAGCTTATGTTGGTCgtaaaaatttcgaatttttataTTAACT
TTATGAGTGTCAATAGTGTCAATAGTGTCAATACACAATGAAGAACAAAC
AGACCAGTAACAGacagtagcgagtttatgtgtTTGCGCTTGTCCTCggt
tggtcatgatctagtcaaattagaaccttaccgtctccgtcgctgaaaaa
cacacatacataaactcggtagtaTTGAGTGAACGCATCGCagcgaaaag
aaaa Run BLAST on NCBI transcript from alignment at sc0000429:26451..27526+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022618 ID=TCONS_00022618|Name=TCONS_00022618|organism=Clytia hemisphaerica|type=transcript|length=1076bp|location=Sequence derived from alignment at sc0000429:26451..27526+ (Clytia hemisphaerica)
TCGAAATTTCATCCTGCGCACATTTCAGGTTGTCAAAGCCACATGGTGGT
GTGTCCGCAATAGGTTCTCCGTGAAGCCATTGTGGTTCTAAATCCGTATC
GCTTTTAGTCAAATAAAATCGGTTTTCTTCGGCTTGATTGGCGTTTGAGC
AGTCGACGGTATCGGCATTGTCCTTTGATTCGAAGACAAACACACGCTCA
GGTTTGAAGATGTTTCTCAAGTCTAATTTCAGTTTTTGTTCATCGAATTG
GAATTGGCGAACTTCGAATAATACTTGGACGTCCGCCTTGCAGTTGACTA
TAAACGGCGAACCGCTTATACCTAGAAGAGAATGTAAGCAATCGTTaaac
aaaataattgttttATCTTGTTGATTTATATCTGTTTATTCTAAACGCAA
CATCGACAAAAAACCTGCAACAACAGCCAAGTTACGTGTAGCACTACTaa
aacttcattttcaaaatctatctacactccaaaaaaagttttttgagtaa
ATTCAATTCGCTATAGGGACGTAATGCAAGACTCGTTCATCAATTCCCTG
TATCTTCAAgaaaatgatttgaaactttctAAATTATACATACTCTCGTG
ACGAGTGTTGAGGATATTTTGGATAATATCAGATCCATTGGTTACACTGT
ATCCTTTGGATAACGTTTTGTTCAATCCGTGAGCGTACAACATGACTGCA
TCATACAGTTGGTGAGCTTCTGGTGGTGGCTGAATGAGGAAGTGAAGAAA
CAAAATGAGTTTGATGACACTTTTTGAACACAAAATTCGTTCAACAAAGG
GAAATAATTCCATGATTGCGATCGGTGACAAGCTTATGTTGGTCgtaaaa
atttcgaatttttataTTAACTTTATGAGTGTCAATAGTGTCAATAGTGT
CAATACACAATGAAGAACAAACAGACCAGTAACAGacagtagcgagttta
tgtgtTTGCGCTTGTCCTCggttggtcatgatctagtcaaattagaacct
taccgtctccgtcgctgaaaaacacacatacataaactcggtagtaTTGA
GTGAACGCATCGCagcgaaaagaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022618-exon-sc0000429-1491911889:26451..26767 | TCONS_00022618-exon-sc0000429-1491911889:26451..26767 | Clytia hemisphaerica | exon |
| TCONS_00022618-exon-sc0000429-1510915933:26451..26767 | TCONS_00022618-exon-sc0000429-1510915933:26451..26767 | Clytia hemisphaerica | exon |
| TCONS_00022618-exon-sc0000429-1575043694:26451..26767 | TCONS_00022618-exon-sc0000429-1575043694:26451..26767 | Clytia hemisphaerica | exon |
| TCONS_00022618-exon-sc0000429-1491911889:27040..27526 | TCONS_00022618-exon-sc0000429-1491911889:27040..27526 | Clytia hemisphaerica | exon |
| TCONS_00022618-exon-sc0000429-1510915933:27040..27526 | TCONS_00022618-exon-sc0000429-1510915933:27040..27526 | Clytia hemisphaerica | exon |
| TCONS_00022618-exon-sc0000429-1575043694:27040..27526 | TCONS_00022618-exon-sc0000429-1575043694:27040..27526 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000429 | supercontig | sc0000429:26451..27526 + |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
|
