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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022676 ID=TCONS_00022676|Name=TCONS_00022676|organism=Clytia hemisphaerica|type=transcript|length=1236bp
tttctctcGAGTGTCTTTGACTCGTGTATAGAATAGGATAAATTCTTTTC
atctatatttttcattttgtaggTTGAGAAGAGCAACAAAGCTGACATCA
AATGTAGGTTTTGTCCAAAAGAATGCAAGAGCAAAGGAGGACTCAAGTTG
CACGTAGCAAGAAAACATCCTGGATTGGTCGATTATGTAGACGAGgatga
agaaaaggaagaatCGGTGATCCAAGTTACTGGAAAATATAAGGATTTCT
TGCTTGACGAGGAAAAGTTATCTGGCATTATGATTGGTACCTTAACAAAg
attattttggacaaaaatacccCGGAAATTTTCGCGAAAGAGCTATCAAC
ATGTGCAGTAGCAGACTTAAAATTGAACATTATTATTGAAAGTGATTCAA
TTAACTTCTTAAGAAAAGGAAATCTTGAACGTTTTCAGCAGCAATTTTTT
CTTGATGTAGTTATCCCAAATAATCTGGTTGCACCAAAACTATCTTGTGG
AGCATCTACATATTTGTTAAAAAAGTTATGTGACATTCTTTATGCTACTT
GTAAGAGGGAATTCGAGCTACCAGAAACTGTAGAAGCTGAGATTGAATTA
TCAAATCGTGAACTTAATGGTTTGCATTATATTGCAGGCTATGTTGTTCG
AAAACTTTACAAGAAGTACAGATTTTCTCAGAAAGGAGCTCTTAAAGACA
GGGAGAAAATTACTACCTTGTTAATTGCATGTAGAGGTCAAACGACTGAA
AATTCAGCCCTTATCGATGCGTTAACTCGAGGTGGATTGTGGTATGTAAA
GAGGGACATCCAAGTGATTTTACAAAAGGTTGAACTTCATTTTAGATATT
TTCGAAATGAAAATAGAACTCTCAAGAATGCCATAAATTGTATTGTGGCA
ACTATGTTAAATGACGTGGAAATcaaagatttctttcaaaacatTGTGGT
GGATGCAGCAGTTACGgttgaaaatgaatttcaaaagtTGACACTTCAGT
CAATTATTGAACTATTCCTGAGAGTTCGTGTGCATTCCTATGCTAAACAA
AAAACTGCTGAATGTAAGCAAAAGAACGCAGCCAAGATACAGGCAAGAAA
AGGTGTgcgaaaaactttgaaagacAAGGATGAGCAAAacaaaaagtaga
ttttttattatttttaaataggTTAGCCAATTATTAGTccttaaaaactg
aaaaatttaaatccctCCATCATTCCTGATAAGCTA Run BLAST on NCBI protein sequence of TCONS_00022676-protein >TCONS_00022676-protein ID=TCONS_00022676-protein|Name=TCONS_00022676-protein|organism=Clytia hemisphaerica|type=polypeptide|length=289bp
MIGTLTKIILDKNTPEIFAKELSTCAVADLKLNIIIESDSINFLRKGNLE
RFQQQFFLDVVIPNNLVAPKLSCGASTYLLKKLCDILYATCKREFELPET
VEAEIELSNRELNGLHYIAGYVVRKLYKKYRFSQKGALKDREKITTLLIA
CRGQTTENSALIDALTRGGLWYVKRDIQVILQKVELHFRYFRNENRTLKN
AINCIVATMLNDVEIKDFFQNIVVDAAVTVENEFQKLTLQSIIELFLRVR
VHSYAKQKTAECKQKNAAKIQARKGVRKTLKDKDEQNKK Run BLAST on NCBI transcript from alignment at sc0000430:91120..92355 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022676 ID=TCONS_00022676|Name=TCONS_00022676|organism=Clytia hemisphaerica|type=transcript|length=1236bp|location=Sequence derived from alignment at sc0000430:91120..92355 (Clytia hemisphaerica)
TAGCTTATCAGGAATGATGGagggatttaaatttttcagtttttaaggAC
TAATAATTGGCTAAcctatttaaaaataataaaaaatctactttttgtTT
TGCTCATCCTTgtctttcaaagtttttcgcACACCTTTTCTTGCCTGTAT
CTTGGCTGCGTTCTTTTGCTTACATTCAGCAGTTTTTTGTTTAGCATAGG
AATGCACACGAACTCTCAGGAATAGTTCAATAATTGACTGAAGTGTCAac
ttttgaaattcattttcaacCGTAACTGCTGCATCCACCACAatgttttg
aaagaaatctttgATTTCCACGTCATTTAACATAGTTGCCACAATACAAT
TTATGGCATTCTTGAGAGTTCTATTTTCATTTCGAAAATATCTAAAATGA
AGTTCAACCTTTTGTAAAATCACTTGGATGTCCCTCTTTACATACCACAA
TCCACCTCGAGTTAACGCATCGATAAGGGCTGAATTTTCAGTCGTTTGAC
CTCTACATGCAATTAACAAGGTAGTAATTTTCTCCCTGTCTTTAAGAGCT
CCTTTCTGAGAAAATCTGTACTTCTTGTAAAGTTTTCGAACAACATAGCC
TGCAATATAATGCAAACCATTAAGTTCACGATTTGATAATTCAATCTCAG
CTTCTACAGTTTCTGGTAGCTCGAATTCCCTCTTACAAGTAGCATAAAGA
ATGTCACATAACTTTTTTAACAAATATGTAGATGCTCCACAAGATAGTTT
TGGTGCAACCAGATTATTTGGGATAACTACATCAAGAAAAAATTGCTGCT
GAAAACGTTCAAGATTTCCTTTTCTTAAGAAGTTAATTGAATCACTTTCA
ATAATAATGTTCAATTTTAAGTCTGCTACTGCACATGTTGATAGCTCTTT
CGCGAAAATTTCCGgggtatttttgtccaaaataatcTTTGTTAAGGTAC
CAATCATAATGCCAGATAACTTTTCCTCGTCAAGCAAGAAATCCTTATAT
TTTCCAGTAACTTGGATCACCGattcttccttttcttcatcCTCGTCTAC
ATAATCGACCAATCCAGGATGTTTTCTTGCTACGTGCAACTTGAGTCCTC
CTTTGCTCTTGCATTCTTTTGGACAAAACCTACATTTGATGTCAGCTTTG
TTGCTCTTCTCAAcctacaaaatgaaaaatatagatGAAAAGAATTTATC
CTATTCTATACACGAGTCAAAGACACTCgagagaaa Coding sequence (CDS) from alignment at sc0000430:91120..92355 >TCONS_00022676 ID=TCONS_00022676|Name=TCONS_00022676|organism=Clytia hemisphaerica|type=CDS|length=870bp|location=Sequence derived from alignment at sc0000430:91120..92355 (Clytia hemisphaerica)
ctactttttgtTTTGCTCATCCTTgtctttcaaagtttttcgcACACCTT
TTCTTGCCTGTATCTTGGCTGCGTTCTTTTGCTTACATTCAGCAGTTTTT
TGTTTAGCATAGGAATGCACACGAACTCTCAGGAATAGTTCAATAATTGA
CTGAAGTGTCAacttttgaaattcattttcaacCGTAACTGCTGCATCCA
CCACAatgttttgaaagaaatctttgATTTCCACGTCATTTAACATAGTT
GCCACAATACAATTTATGGCATTCTTGAGAGTTCTATTTTCATTTCGAAA
ATATCTAAAATGAAGTTCAACCTTTTGTAAAATCACTTGGATGTCCCTCT
TTACATACCACAATCCACCTCGAGTTAACGCATCGATAAGGGCTGAATTT
TCAGTCGTTTGACCTCTACATGCAATTAACAAGGTAGTAATTTTCTCCCT
GTCTTTAAGAGCTCCTTTCTGAGAAAATCTGTACTTCTTGTAAAGTTTTC
GAACAACATAGCCTGCAATATAATGCAAACCATTAAGTTCACGATTTGAT
AATTCAATCTCAGCTTCTACAGTTTCTGGTAGCTCGAATTCCCTCTTACA
AGTAGCATAAAGAATGTCACATAACTTTTTTAACAAATATGTAGATGCTC
CACAAGATAGTTTTGGTGCAACCAGATTATTTGGGATAACTACATCAAGA
AAAAATTGCTGCTGAAAACGTTCAAGATTTCCTTTTCTTAAGAAGTTAAT
TGAATCACTTTCAATAATAATGTTCAATTTTAAGTCTGCTACTGCACATG
TTGATAGCTCTTTCGCGAAAATTTCCGgggtatttttgtccaaaataatc
TTTGTTAAGGTACCAATCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022676-exon-sc0000430-1491911889:91120..92355 | TCONS_00022676-exon-sc0000430-1491911889:91120..92355 | Clytia hemisphaerica | exon |
| TCONS_00022676-exon-sc0000430-1510915933:91120..92355 | TCONS_00022676-exon-sc0000430-1510915933:91120..92355 | Clytia hemisphaerica | exon |
| TCONS_00022676-exon-sc0000430-1575043694:91120..92355 | TCONS_00022676-exon-sc0000430-1575043694:91120..92355 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000430 | supercontig | sc0000430:91120..92355 . |
Blast
The following BLAST results are available for this feature:
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