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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022834 ID=TCONS_00022834|Name=TCONS_00022834|organism=Clytia hemisphaerica|type=transcript|length=237bp
aggttttacGACCGTTTGCAGGTAATTGCCAAAGAAAATGATGAGAAGAA
TGCAAAAAGGAGATTCGCCTATCCGTGGTTGTCACCTAAAGTCGTTCCCA
ACTCTATCAGTATTTAAGATTCAAGCATGGATCTTGCTACAAAAGAACTA
AACGCAGGCGACAGATGATTTAAGGCGAGTCCTGGACATCTTACATGATG
CCAAGCCATCACTCGTTTCCCATTGAATTGCCCAAAG Run BLAST on NCBI transcript from alignment at sc0000434:222284..223874- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022834 ID=TCONS_00022834|Name=TCONS_00022834|organism=Clytia hemisphaerica|type=transcript|length=1591bp|location=Sequence derived from alignment at sc0000434:222284..223874- (Clytia hemisphaerica)
AGGTTTTACGACCGTTTGCAGGTAATTGCCAAAGAAAATGATGAGAAGAA
TGCAAAAAGGAGATTCGCCTATCCGTGGTTGTCACCTAAAGTCGTTCCCA
ACTCTATCAGTATTTAAGGTGCAATAATCATAATTGAAGATTTGAATATG
CAATTATACGTCATCATATATTTTAAAACCCGTCTGGTATATATTGTTAT
GTTATGTGAATATTGTACTTTGTTAACCGGTTACTTTTTCGAAGCGGGCT
ACATGGCTTTTTGCGCAATGCAATTGGTTCTTTTCGCATGACGACGGGCC
TACATTGTCCAGAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACAACCTCGCAAGCTCGG
TCGTTACTTGACCTCGGGCAATATTTCTCAGTACAGCCCTCACTAACCGG
TCATTATTGTATTATTAATGGGATTAAATTTGGAGTGGATCAAATTTCGT
GGTTGGCACTATTGGGTGGCGCAATATTTTCACGATTTTGTGACTTTATG
TTAAACCATGCATGTTGGTTGTTGAAATACACATTATTTGCGCCTCTTTG
ATGGAAGTAACCATTCAAAAAGTATTTATTTGACATATTTTGAGTTTTGT
TTAGAAACATTTCGCGGATAAGGCCCTTCCAAATTTCCTTTGGGACTTAA
TCTCGCGGACTTTCCCGGATANTATTTCGCGGATGAGGCCCTTCCAAATT
TCCTTTGGGACTTAATCTCGCGGACTTTCCCGGATAACACCTAAATTCAC
GAACTCCGCAAAATTTAATCCCTGCGAAAGTTTATCCCATTAACGTACGG
ACGTAAGAAAGATATTATAATGAGGTTTTGTTGAAACTGGGAAACGATTA
TTAATACACCGTTTTATTTAAATATTTTAACTGCTTTTTTGTTAATTATT
TTACTTTAATTGTTTAATTTCTTCCTTCACATACATTATTATTTTAAGAT
TCAAGCATGGATCTTGCTACAAAAGAACTAAACGCAGTCGACNTCTTCCT
TCACATACATTATTATTTTAAGATTCAAGCATGGATCTTGCTACAAAAGA
ACTAAACGCAGGCGACAGATGATTTAAGGCGAGTCCTGGACATCTTACAT
GATGCCAAGCCATCACTCGTTTCCCATTGAATTGCCCAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022834-exon-sc0000434-1575043694:223757..223874 | TCONS_00022834-exon-sc0000434-1575043694:223757..223874 | Clytia hemisphaerica | exon |
| TCONS_00022834-exon-sc0000434-1575043694:222284..222402 | TCONS_00022834-exon-sc0000434-1575043694:222284..222402 | Clytia hemisphaerica | exon |
| TCONS_00022834-exon-sc0000434-1510915933:223757..223874 | TCONS_00022834-exon-sc0000434-1510915933:223757..223874 | Clytia hemisphaerica | exon |
| TCONS_00022834-exon-sc0000434-1510915933:222284..222402 | TCONS_00022834-exon-sc0000434-1510915933:222284..222402 | Clytia hemisphaerica | exon |
| TCONS_00022834-exon-sc0000434-1491911889:223757..223874 | TCONS_00022834-exon-sc0000434-1491911889:223757..223874 | Clytia hemisphaerica | exon |
| TCONS_00022834-exon-sc0000434-1491911889:222284..222402 | TCONS_00022834-exon-sc0000434-1491911889:222284..222402 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000434 | supercontig | sc0000434:222284..223874 - |
Blast
The following BLAST results are available for this feature:
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