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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022989 ID=TCONS_00022989|Name=TCONS_00022989|organism=Clytia hemisphaerica|type=transcript|length=912bp
GTCACATCAAGGCAAGGAAAATCAGTAAGAAGGTCAATAGTTTTACACTA
TTCTCTACTCTAAATTAGTTTAAACATGCATTTTCTAACATCATTACAAT
TAAtctatatttttcagattttacaaAGCAACTAATGAAATAAATAACTA
ACAGAATAATTTTTAATTGTGGATGGCAAGCCTGAGGAGGCGaagattta
atatttaaagTATCAGACGAGCCGAGATATGATGAGAAAATGTAAACgtg
taaaacaacaaaaaactaaTCGTTCACCGACACTCCACTGGTTTTTGTGT
GTGAAATATCAATTGAGAAATCAAACTAGGAAATAAATGGAATGAATGCA
AATATAGAAAAATGTGCTAGAAAGTTGCTTGATAAATTCATCATGGTGGT
GCCACCAAATCCTCCGTTCCATGTTTGCAGAATTGACGAATTTCTTTACG
CAAATATTCGGCCCGCTGTTTCGTGAATCCTTTCGGTGGGACGATCTTCG
GTAATGCAGCAGTCACTTTTGGTGGATTTCGCTGAATGAAAATGGAGAAC
TCGACTGGTTCATCATCTAGTGATTTATAACACTTAACAATTCCAGGCTG
ATCCTTCGACATCCTGAAATGGTGATATTTAAGAATATCTTTGATGGTCT
GGAACCGTAACTCCTTTTCAAAGTAATGTGACCAGTCATACGTTTGAACA
GTGATATCTTTGTTGTGGTTACCAACAAGTACAGCGAAATTACATTTTGA
TTGGTCGTAAACATCAGCGATCTCGTACGGAGATGATACTCGAGTTGATC
GTAGTTTCTTTTTGAAGCTGCCGAAGCACCTTAAGAAAGATACAAAAATA
TACATTTTAGGCTGCGCTTGAAAATATATATTGGTTTGTCATCACCTGAC
CCTAGATTGACC Run BLAST on NCBI protein sequence of TCONS_00022989-protein >TCONS_00022989-protein ID=TCONS_00022989-protein|Name=TCONS_00022989-protein|organism=Clytia hemisphaerica|type=polypeptide|length=154bp
MYIFVSFLRCFGSFKKKLRSTRVSSPYEIADVYDQSKCNFAVLVGNHNKD
ITVQTYDWSHYFEKELRFQTIKDILKYHHFRMSKDQPGIVKCYKSLDDEP
VEFSIFIQRNPPKVTAALPKIVPPKGFTKQRAEYLRKEIRQFCKHGTEDL
VAPP Run BLAST on NCBI transcript from alignment at sc0000437:132267..133178 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022989 ID=TCONS_00022989|Name=TCONS_00022989|organism=Clytia hemisphaerica|type=transcript|length=912bp|location=Sequence derived from alignment at sc0000437:132267..133178 (Clytia hemisphaerica)
GGTCAATCTAGGGTCAGGTGATGACAAACCAATATATATTTTCAAGCGCA
GCCTAAAATGTATATTTTTGTATCTTTCTTAAGGTGCTTCGGCAGCTTCA
AAAAGAAACTACGATCAACTCGAGTATCATCTCCGTACGAGATCGCTGAT
GTTTACGACCAATCAAAATGTAATTTCGCTGTACTTGTTGGTAACCACAA
CAAAGATATCACTGTTCAAACGTATGACTGGTCACATTACTTTGAAAAGG
AGTTACGGTTCCAGACCATCAAAGATATTCTTAAATATCACCATTTCAGG
ATGTCGAAGGATCAGCCTGGAATTGTTAAGTGTTATAAATCACTAGATGA
TGAACCAGTCGAGTTCTCCATTTTCATTCAGCGAAATCCACCAAAAGTGA
CTGCTGCATTACCGAAGATCGTCCCACCGAAAGGATTCACGAAACAGCGG
GCCGAATATTTGCGTAAAGAAATTCGTCAATTCTGCAAACATGGAACGGA
GGATTTGGTGGCACCACCATGATGAATTTATCAAGCAACTTTCTAGCACA
TTTTTCTATATTTGCATTCATTCCATTTATTTCCTAGTTTGATTTCTCAA
TTGATATTTCACACACAAAAACCAGTGGAGTGTCGGTGAACGAttagttt
tttgttgttttacacGTTTACATTTTCTCATCATATCTCGGCTCGTCTGA
TActttaaatattaaatcttCGCCTCCTCAGGCTTGCCATCCACAATTAA
AAATTATTCTGTTAGTTATTTATTTCATTAGTTGCTttgtaaaatctgaa
aaatatagaTTAATTGTAATGATGTTAGAAAATGCATGTTTAAACTAATT
TAGAGTAGAGAATAGTGTAAAACTATTGACCTTCTTACTGATTTTCCTTG
CCTTGATGTGAC Coding sequence (CDS) from alignment at sc0000437:132267..133178 >TCONS_00022989 ID=TCONS_00022989|Name=TCONS_00022989|organism=Clytia hemisphaerica|type=CDS|length=465bp|location=Sequence derived from alignment at sc0000437:132267..133178 (Clytia hemisphaerica)
ATGTATATTTTTGTATCTTTCTTAAGGTGCTTCGGCAGCTTCAAAAAGAA
ACTACGATCAACTCGAGTATCATCTCCGTACGAGATCGCTGATGTTTACG
ACCAATCAAAATGTAATTTCGCTGTACTTGTTGGTAACCACAACAAAGAT
ATCACTGTTCAAACGTATGACTGGTCACATTACTTTGAAAAGGAGTTACG
GTTCCAGACCATCAAAGATATTCTTAAATATCACCATTTCAGGATGTCGA
AGGATCAGCCTGGAATTGTTAAGTGTTATAAATCACTAGATGATGAACCA
GTCGAGTTCTCCATTTTCATTCAGCGAAATCCACCAAAAGTGACTGCTGC
ATTACCGAAGATCGTCCCACCGAAAGGATTCACGAAACAGCGGGCCGAAT
ATTTGCGTAAAGAAATTCGTCAATTCTGCAAACATGGAACGGAGGATTTG
GTGGCACCACCATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022989-exon-sc0000437-1491911889:132267..133178 | TCONS_00022989-exon-sc0000437-1491911889:132267..133178 | Clytia hemisphaerica | exon |
| TCONS_00022989-exon-sc0000437-1510915933:132267..133178 | TCONS_00022989-exon-sc0000437-1510915933:132267..133178 | Clytia hemisphaerica | exon |
| TCONS_00022989-exon-sc0000437-1575043694:132267..133178 | TCONS_00022989-exon-sc0000437-1575043694:132267..133178 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000437 | supercontig | sc0000437:132267..133178 . |
Blast
The following BLAST results are available for this feature:
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