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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022991 ID=TCONS_00022991|Name=TCONS_00022991|organism=Clytia hemisphaerica|type=transcript|length=1536bp
tttgtaaaaaaataatttttcagctcaaaaaacgcatctttatctataag
aatcactattaataagcatacatcaatgtacttagccaaattactcaatt
ttttgatgagatagatgtttgtttttgctcaCGGAGTCttaaatatgaaa
gaatatttcaagagactgaaagttttgtttctaaacgtttttttataaga
aacaaacgactaattttaataaatcgtcactatttgtgttctgaatgatt
gtttaatggtcatgtcacgtagatatcaattatatgtgttaaatgcataa
ccaggtaggtccataaaagtatcacttgttaattTTAGAATCAACTAAGT
TTTACAAACCTAAAAAATGGTTGAGACTAATAATGATGAGTTACTAATTG
TAAAGTTGGAAGAAAACTTCGAATATGAAGAAACTGATAATAACATCTCT
TCTAAGCTGGAATTAGAAAGCAAAATCCTTCAAAGAGACAAGGAAAATGC
CGAGTTGAAAGCTGCTCTCAAAGATATGAAGTATGAGAAGGAAATATTAG
TTGGCAAATATGAAATAGAGAAACTGAGATCAGAGAATGTTCTGATGAAA
GCAGAGAAACAGTTTGGAATTGATGTAAAAACAGCAGCAAATAGGAAACG
taaaattgaagaagaattGGTAAATACTAAAGCAAAAATAACCAAACTGG
ATGAGCAACAAAGcaaatttgaagaagaaaagatatttttgaaagaGAAT
TTTGAGGagcttgagaaaaaaatcacaaaactaGAGGGGCATAATATTAA
ATTGCGGAAGCAAAATACACAATTAAAGCACACAAATAACGTACTAAAGG
ACACAAATAAAAAACACCAAGAGAAAAATATCACTctgtataaagaaaaa
aataaatttgaaaatttatataTGGAGTGCAAACATGAGAAGGAAAATCT
ACTACTTCGACAAAAATCATTAGAAGGTTCATCGATATCGAAGCTCACAA
GTCAAAAACATGGTCACAAAGAAATCCCAAAAGAAGTCAGCAAAGTCAGA
GAGGTTATGATAAGCTTATCAAATCAACTTGATTATGCTCGAATGCCGCT
TGGGGATTTACTCAAAATAGGAGTTGCAATGATTTTTGAACAAGCACCTA
ATCCAAACTATGTCAATTGGTATAAAAGTATGCACCAAAGATCACGTACA
ATACTATCTAATATCATTTGGCAAGATTACTTCTTGTACAAGCATTGTGG
AGGTCCGTCAAAAGAGCCATTATATATTGACCTTGGAATGTGGCTTCTTC
CAAATGGCTGGAATTTACTTAGTTCCAATATCAAAATTCTTCACACCAGA
GATAACAGAAAGCAAAAGGATATCGAATATATTAGCGATGATGAATGGCT
AATTAGTGATTTGTCAAAAGAGTTTGTACATGAAGGATACTTTCTAATTC
TTGTAAAGAAGCAATATTTAGCTTTAGAATAAAGCTTGTTGGATTAGGTT
CTTTGTtaatgaaagttaaaaaaaatttaaaaagag Run BLAST on NCBI protein sequence of TCONS_00022991-protein >TCONS_00022991-protein ID=TCONS_00022991-protein|Name=TCONS_00022991-protein|organism=Clytia hemisphaerica|type=polypeptide|length=371bp
MVETNNDELLIVKLEENFEYEETDNNISSKLELESKILQRDKENAELKAA
LKDMKYEKEILVGKYEIEKLRSENVLMKAEKQFGIDVKTAANRKRKIEEE
LVNTKAKITKLDEQQSKFEEEKIFLKENFEELEKKITKLEGHNIKLRKQN
TQLKHTNNVLKDTNKKHQEKNITLYKEKNKFENLYMECKHEKENLLLRQK
SLEGSSISKLTSQKHGHKEIPKEVSKVREVMISLSNQLDYARMPLGDLLK
IGVAMIFEQAPNPNYVNWYKSMHQRSRTILSNIIWQDYFLYKHCGGPSKE
PLYIDLGMWLLPNGWNLLSSNIKILHTRDNRKQKDIEYISDDEWLISDLS
KEFVHEGYFLILVKKQYLALE Run BLAST on NCBI transcript from alignment at sc0000437:240967..242502 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022991 ID=TCONS_00022991|Name=TCONS_00022991|organism=Clytia hemisphaerica|type=transcript|length=1536bp|location=Sequence derived from alignment at sc0000437:240967..242502 (Clytia hemisphaerica)
ctctttttaaattttttttaactttcattaACAAAGAACCTAATCCAACA
AGCTTTATTCTAAAGCTAAATATTGCTTCTTTACAAGAATTAGAAAGTAT
CCTTCATGTACAAACTCTTTTGACAAATCACTAATTAGCCATTCATCATC
GCTAATATATTCGATATCCTTTTGCTTTCTGTTATCTCTGGTGTGAAGAA
TTTTGATATTGGAACTAAGTAAATTCCAGCCATTTGGAAGAAGCCACATT
CCAAGGTCAATATATAATGGCTCTTTTGACGGACCTCCACAATGCTTGTA
CAAGAAGTAATCTTGCCAAATGATATTAGATAGTATTGTACGTGATCTTT
GGTGCATACTTTTATACCAATTGACATAGTTTGGATTAGGTGCTTGTTCA
AAAATCATTGCAACTCCTATTTTGAGTAAATCCCCAAGCGGCATTCGAGC
ATAATCAAGTTGATTTGATAAGCTTATCATAACCTCTCTGACTTTGCTGA
CTTCTTTTGGGATTTCTTTGTGACCATGTTTTTGACTTGTGAGCTTCGAT
ATCGATGAACCTTCTAATGATTTTTGTCGAAGTAGTAGATTTTCCTTCTC
ATGTTTGCACTCCAtatataaattttcaaatttatttttttctttataca
gAGTGATATTTTTCTCTTGGTGTTTTTTATTTGTGTCCTTTAGTACGTTA
TTTGTGTGCTTTAATTGTGTATTTTGCTTCCGCAATTTAATATTATGCCC
CTCtagttttgtgatttttttctcaagctCCTCAAAATTCtctttcaaaa
atatcttttcttcttcaaatttgCTTTGTTGCTCATCCAGTTTGGTTATT
TTTGCTTTAGTATTTACCaattcttcttcaattttaCGTTTCCTATTTGC
TGCTGTTTTTACATCAATTCCAAACTGTTTCTCTGCTTTCATCAGAACAT
TCTCTGATCTCAGTTTCTCTATTTCATATTTGCCAACTAATATTTCCTTC
TCATACTTCATATCTTTGAGAGCAGCTTTCAACTCGGCATTTTCCTTGTC
TCTTTGAAGGATTTTGCTTTCTAATTCCAGCTTAGAAGAGATGTTATTAT
CAGTTTCTTCATATTCGAAGTTTTCTTCCAACTTTACAATTAGTAACTCA
TCATTATTAGTCTCAACCATTTTTTAGGTTTGTAAAACTTAGTTGATTCT
AAaattaacaagtgatacttttatggacctacctggttatgcatttaaca
catataattgatatctacgtgacatgaccattaaacaatcattcagaaca
caaatagtgacgatttattaaaattagtcgtttgtttcttataaaaaaac
gtttagaaacaaaactttcagtctcttgaaatattctttcatatttaaGA
CTCCGtgagcaaaaacaaacatctatctcatcaaaaaattgagtaatttg
gctaagtacattgatgtatgcttattaatagtgattcttatagataaaga
tgcgttttttgagctgaaaaattatttttttacaaa Coding sequence (CDS) from alignment at sc0000437:240967..242502 >TCONS_00022991 ID=TCONS_00022991|Name=TCONS_00022991|organism=Clytia hemisphaerica|type=CDS|length=1116bp|location=Sequence derived from alignment at sc0000437:240967..242502 (Clytia hemisphaerica)
TTATTCTAAAGCTAAATATTGCTTCTTTACAAGAATTAGAAAGTATCCTT
CATGTACAAACTCTTTTGACAAATCACTAATTAGCCATTCATCATCGCTA
ATATATTCGATATCCTTTTGCTTTCTGTTATCTCTGGTGTGAAGAATTTT
GATATTGGAACTAAGTAAATTCCAGCCATTTGGAAGAAGCCACATTCCAA
GGTCAATATATAATGGCTCTTTTGACGGACCTCCACAATGCTTGTACAAG
AAGTAATCTTGCCAAATGATATTAGATAGTATTGTACGTGATCTTTGGTG
CATACTTTTATACCAATTGACATAGTTTGGATTAGGTGCTTGTTCAAAAA
TCATTGCAACTCCTATTTTGAGTAAATCCCCAAGCGGCATTCGAGCATAA
TCAAGTTGATTTGATAAGCTTATCATAACCTCTCTGACTTTGCTGACTTC
TTTTGGGATTTCTTTGTGACCATGTTTTTGACTTGTGAGCTTCGATATCG
ATGAACCTTCTAATGATTTTTGTCGAAGTAGTAGATTTTCCTTCTCATGT
TTGCACTCCAtatataaattttcaaatttatttttttctttatacagAGT
GATATTTTTCTCTTGGTGTTTTTTATTTGTGTCCTTTAGTACGTTATTTG
TGTGCTTTAATTGTGTATTTTGCTTCCGCAATTTAATATTATGCCCCTCt
agttttgtgatttttttctcaagctCCTCAAAATTCtctttcaaaaatat
cttttcttcttcaaatttgCTTTGTTGCTCATCCAGTTTGGTTATTTTTG
CTTTAGTATTTACCaattcttcttcaattttaCGTTTCCTATTTGCTGCT
GTTTTTACATCAATTCCAAACTGTTTCTCTGCTTTCATCAGAACATTCTC
TGATCTCAGTTTCTCTATTTCATATTTGCCAACTAATATTTCCTTCTCAT
ACTTCATATCTTTGAGAGCAGCTTTCAACTCGGCATTTTCCTTGTCTCTT
TGAAGGATTTTGCTTTCTAATTCCAGCTTAGAAGAGATGTTATTATCAGT
TTCTTCATATTCGAAGTTTTCTTCCAACTTTACAATTAGTAACTCATCAT
TATTAGTCTCAACCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022991-exon-sc0000437-1491911889:240967..242502 | TCONS_00022991-exon-sc0000437-1491911889:240967..242502 | Clytia hemisphaerica | exon |
| TCONS_00022991-exon-sc0000437-1510915933:240967..242502 | TCONS_00022991-exon-sc0000437-1510915933:240967..242502 | Clytia hemisphaerica | exon |
| TCONS_00022991-exon-sc0000437-1575043694:240967..242502 | TCONS_00022991-exon-sc0000437-1575043694:240967..242502 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000437 | supercontig | sc0000437:240967..242502 . |
Blast
The following BLAST results are available for this feature:
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