TCONS_00023074 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023074
Unique NameTCONS_00023074
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length122

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023074 ID=TCONS_00023074|Name=TCONS_00023074|organism=Clytia hemisphaerica|type=transcript|length=122bp
GTAACAGGATTATTTTTAAAACCATCATGCtcttcagtaaaatcaaaaca
agatcAATCATTTTGCTTTCATCATGATTTCGCAGACTTGATTTCCACGC
TATTTCAAAACGCCCTTAGACC
Run BLAST on NCBI

transcript from alignment at sc0000439:64557..64678

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023074 ID=TCONS_00023074|Name=TCONS_00023074|organism=Clytia hemisphaerica|type=transcript|length=122bp|location=Sequence derived from alignment at sc0000439:64557..64678 (Clytia hemisphaerica)
GGTCTAAGGGCGTTTTGAAATAGCGTGGAAATCAAGTCTGCGAAATCATG
ATGAAAGCAAAATGATTgatcttgttttgattttactgaagaGCATGATG
GTTTTAAAAATAATCCTGTTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012961XLOC_012961Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023074-exon-sc0000439-1491911889:64557..64678TCONS_00023074-exon-sc0000439-1491911889:64557..64678Clytia hemisphaericaexon
TCONS_00023074-exon-sc0000439-1510915933:64557..64678TCONS_00023074-exon-sc0000439-1510915933:64557..64678Clytia hemisphaericaexon
TCONS_00023074-exon-sc0000439-1575043694:64557..64678TCONS_00023074-exon-sc0000439-1575043694:64557..64678Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000439supercontigsc0000439:64557..64678 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00023074 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top