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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00023119 ID=TCONS_00023119|Name=TCONS_00023119|organism=Clytia hemisphaerica|type=transcript|length=1575bp
TCATTTCATACAACTACATAAACATCattgatatcaaaacaaaacaaggt
TTTTAAGTTTAAGCGATTACAGATTCCAATAGAAGTATTTGTTATTTTAC
ACGAGTTTCTCATTTGTGCGTCTTTCTATCAGAAACTTAAAATGGATTTT
GCACATCGCGATGAACGCAACTTGACACATAGTGCTACTGGTAGAAATAT
CACCAACAAAGCTGACAGTGTagaaatctcaaaacttaaagaAGATTATG
AGAAGCAGATTCGAAAATTGACATTTGAAAATCGTATCAAAACCCTGGAG
CTGGAGAAAGAAATGACCAAACAGGATAATGAGCAGAAGATGAAGATTTT
GCAGCTTGAAAAGGACAATCAATCGTTAATACATGAACTTGAGCTTGTCA
AGTTGAAGACCGCCCATGAGATGGAGGCTAAGGGCGGTGTGGTTGATCGC
GAAATGGAGAAAGAAATGCTGGAACAGCAGAAAGAGTTTCAGAACAAACT
GGCTGAGAAAGACAAGGAGATTGCTGCCAAGGAAAACGAGTTCAATCTTA
AAATGAAGGACTTAGAGATTTCAAAAGACAAGGAGATTGCTGCCAAGGAA
AACGAacgcaaaacaaaaatcaatgaaatggaAAAAGTAACTCTGGCAAA
AGAGCACGAGTACCAAACCAAACTTGCTGCCAAAGAAAACGAATTCAATT
TGAAAGTCAAGGATTTGGAGAAAGAAAAGGAGTTAGAGATTCAAGCGCTG
CGTCACGAAAATGAAATAATGaaatcgaaaaagaaatccACAAATGAGAA
CGCAACTGAAGAAAAGAAGGGACAAGTGATTACGAGAAATGCGCAACAAA
ATCATCTGGAACCGAAAATGCAAAGCCTTGTCGACGGTattgttaacttt
ttttctggTCAGCCTCTTCCTTCTGCTTCTTACAAAAATTGGTATGAAGA
TATTTCAAGGTCTTTGGTCAATAAAAAACCAGAATTCGTTTTACATGGAT
CATCGAGTTGTTATTTCGTTAAGAAAGAGATGTGTCAAATACATAATTGT
TTGTATCTCGCAACTAAGAGAAAGAACGAGAGTCGTGGGGAAGGTGTAAA
TGTTCTAGATCTTGTTGTTCCGAATAAACAACAATTGAAGAAtgcaaaag
tgtttttattACATCCAGTTAACCGGAAAATGTGTATTGAGCATGGTAAA
ATGTACACTAATGATAACCACGAGATGTGGGAATTTCTAAATGTTAACAA
TACCTACTTCGGAGAGAAACTATCAATTATAATGTTGCTTAAGTTTGAAA
TGACCAAATAAAGTTTTTGCCTTGTATGGTATAAAGCAAActgacaattt
gaaattttgatgaaaatgtcgAATAAACAGAGAGTAAAACATTATGAAGT
TTTAACCAGAAaactttcatcaatttttgtaTCTTTAAGAATTTcatatt
aattttttaattttattttattattcagATCAAAATTCGTAATATTTTAA
CATTGACAAAAGATACCGGGTGTGTTTTAAAAAACGCccctatttttcaa
tttttgtcgtTCATTTTTCTATCAA Run BLAST on NCBI transcript from alignment at sc0000443:19015..20589- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00023119 ID=TCONS_00023119|Name=TCONS_00023119|organism=Clytia hemisphaerica|type=transcript|length=1575bp|location=Sequence derived from alignment at sc0000443:19015..20589- (Clytia hemisphaerica)
TCATTTCATACAACTACATAAACATCATTGATATCAAAACAAAACAAGGT
TTTTAAGTTTAAGCGATTACAGATTCCAATAGAAGTATTTGTTATTTTAC
ACGAGTTTCTCATTTGTGCGTCTTTCTATCAGAAACTTAAAATGGATTTT
GCACATCGCGATGAACGCAACTTGACACATAGTGCTACTGGTAGAAATAT
CACCAACAAAGCTGACAGTGTAGAAATCTCAAAACTTAAAGAAGATTATG
AGAAGCAGATTCGAAAATTGACATTTGAAAATCGTATCAAAACCCTGGAG
CTGGAGAAAGAAATGACCAAACAGGATAATGAGCAGAAGATGAAGATTTT
GCAGCTTGAAAAGGACAATCAATCGTTAATACATGAACTTGAGCTTGTCA
AGTTGAAGACCGCCCATGAGATGGAGGCTAAGGGCGGTGTGGTTGATCGC
GAAATGGAGAAAGAAATGCTGGAACAGCAGAAAGAGTTTCAGAACAAACT
GGCTGAGAAAGACAAGGAGATTGCTGCCAAGGAAAACGAGTTCAATCTTA
AAATGAAGGACTTAGAGATTTCAAAAGACAAGGAGATTGCTGCCAAGGAA
AACGAACGCAAAACAAAAATCAATGAAATGGAAAAAGTAACTCTGGCAAA
AGAGCACGAGTACCAAACCAAACTTGCTGCCAAAGAAAACGAATTCAATT
TGAAAGTCAAGGATTTGGAGAAAGAAAAGGAGTTAGAGATTCAAGCGCTG
CGTCACGAAAATGAAATAATGAAATCGAAAAAGAAATCCACAAATGAGAA
CGCAACTGAAGAAAAGAAGGGACAAGTGATTACGAGAAATGCGCAACAAA
ATCATCTGGAACCGAAAATGCAAAGCCTTGTCGACGGTATTGTTAACTTT
TTTTCTGGTCAGCCTCTTCCTTCTGCTTCTTACAAAAATTGGTATGAAGA
TATTTCAAGGTCTTTGGTCAATAAAAAACCAGAATTCGTTTTACATGGAT
CATCGAGTTGTTATTTCGTTAAGAAAGAGATGTGTCAAATACATAATTGT
TTGTATCTCGCAACTAAGAGAAAGAACGAGAGTCGTGGGGAAGGTGTAAA
TGTTCTAGATCTTGTTGTTCCGAATAAACAACAATTGAAGAATGCAAAAG
TGTTTTTATTACATCCAGTTAACCGGAAAATGTGTATTGAGCATGGTAAA
ATGTACACTAATGATAACCACGAGATGTGGGAATTTCTAAATGTTAACAA
TACCTACTTCGGAGAGAAACTATCAATTATAATGTTGCTTAAGTTTGAAA
TGACCAAATAAAGTTTTTGCCTTGTATGGTATAAAGCAAACTGACAATTT
GAAATTTTGATGAAAATGTCGAATAAACAGAGAGTAAAACATTATGAAGT
TTTAACCAGAAAACTTTCATCAATTTTTGTATCTTTAAGAATTTCATATT
AATTTTTTAATTTTATTTTATTATTCAGATCAAAATTCGTAATATTTTAA
CATTGACAAAAGATACCGGGTGTGTTTTAAAAAACGCCCCTATTTTTCAA
TTTTTGTCGTTCATTTTTCTATCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00023119-exon-sc0000443-1575043694:19015..20589 | TCONS_00023119-exon-sc0000443-1575043694:19015..20589 | Clytia hemisphaerica | exon |
| TCONS_00023119-exon-sc0000443-1510915933:19015..20589 | TCONS_00023119-exon-sc0000443-1510915933:19015..20589 | Clytia hemisphaerica | exon |
| TCONS_00023119-exon-sc0000443-1491911889:19015..20589 | TCONS_00023119-exon-sc0000443-1491911889:19015..20589 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000443 | supercontig | sc0000443:19015..20589 - |
Blast
The following BLAST results are available for this feature:
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