TCONS_00023228 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023228
Unique NameTCONS_00023228
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4145

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023228 ID=TCONS_00023228|Name=TCONS_00023228|organism=Clytia hemisphaerica|type=transcript|length=4145bp
GNCGTTAATATTTCAGATTTTGCTGCTAATAAGGTCTCATTAACTGGATC
AGACATACTAACCAAATCAATCATATTTACAAATGGGTTCAACGTTAGTT
CTGATGTCAACGTTGGTGGATATGTTGATGGTGCAAACATTACTGCGCTC
TGGCAATCTGCAAACTCTGACCAAAACATTGACGAAGAGATTCAAGggtC
GAAGATCTTCCAGAATGTGACAGTTAAAGGACAGTGTAACATTGAATCAG
TCAATGGCAAAGACTTCGACAATCTAGCTTTGAAAAACCAAACCAATAAT
TTCACTGGCAAAgttgttttcaatgaaaatgtcaCTGTGCAAGAACACTT
GATCACCAGCAGTAACTCTACCATCAACAACCTCATTTTCCAAACCGACT
TGGTGCTTTCGGACGGTTCACACATCATTACCGGacacaaaacattcgaa
agtatTCATCTGATGGAGAATGTAACAATTCATGGAGATATCAATGGTGT
GGATTTGAAAACGTTTGTGGAAACTGTTGTTCAGAAAGGAGACAATAGAA
CTGTTACAGGCAAGAAGCATTTCCACTCAACTGTCAACGCAGAGCAACTA
TTGACAGAACTGGTTAATAACATTAATGTAGAGGAATTACTGAACAATGT
TCTCGTCTTGGTAAATGGAACCAAGATCAATGCATCTATGGTGAAATTCC
AATCATTGAATATATCTTCTGTCAGAGTTGAAGGAACCGTCAATGGTTTG
AAGATTCCGGATGATTTGGTGTTACTTTCCACTATTCAACACATCGAAGG
ATCCAAGACCTTCACCAACAATGTCACCATACTAAACATCCACAGTATCA
ACGTCATCGGTGATGAAGACTTTTCAAAGTTCCTTCGTGAAGCTGCACAG
AATCTCCCTGGTCAAATTGTAGAAGCAAATGTCACATTTAAGAATTCGGT
CACTTTCACAGATGAGATCACAACTGAAAAATTGAATGGACAAAGTGTCG
ATAATTGGTTAACAACGAACACCGAACAGAACATTACCGGCACGATTCGT
CTACTGAACGATACCACATTCACTTCATCAATAACTACTGATGTTGTCGA
CATCACTGGAAAGgtcaATGGAATCGATATATCAGATCTGGAAGCCTCAG
CCATTTACAAGAACACCAGTGAGACGATAAACAACACACGATTAGTCTTC
GTCAATGGTATCGATTGCAAACAAAACCTTTCAGTAGCTGGATTGATCAA
TGGAGTCAATTTGACAGAGCTCTACCACAACACTGTCAGAATCTCCAAGA
ATCAAACAGTTGCCGGAGAAAAGGTCTTCACAAACACTGTCATACTGAAA
GATACACTGACCACATCGGGCACCATCAACAACATTAACCTAACCAAGCT
TGAACAAGATTCATTGAAAACTGTTGGAGAAGAAACACTCCTTGGAAATG
TCACCTTCATAAATAACGTTATAGTAAATGGTACTCTTAATGCTGGTGGA
TCTATTGATGGTACTGATCTAAATGAATTCTTGGAAAATGCTGCATTTGT
AGATTCGAATGGCACTCTTTCAATCAATGGGAGCTTAACATTCAATAATG
TCACTGCTAATACTGTCCACACCAGCACTGGAGTGAATGGTCTTTCTTTG
AATGACATTCTTCTTCAAGGTGTTAATCAAACCTTATCTGGCAATGTCAG
CTTCACCAACGTTTCAGCATCAAGCATCCAAACAGAGTTGATCAACGGTG
AGAATCTGACCGATGTTTTTGGAAAGGCTTTGAAGACTACAGGAGATCAA
AACATCACTGGAACCTACATTTTTAATGATTTGTTTGTGGAGGAGAATCT
GGCAATCAAAACTGTAAACGGTGTTGATTTTGATGGCTTCTTAGAATCTG
CCGTTCCAACTAATGAAACATCTACACTCCAAGGAATTATTCGGTTTACC
AGCGATGTCGTTATTGACCAATTAGAAACCACTAAATCATTAGGTGATGT
AAACATCACACGAATGTTAACTGACACCCTTTTGAAGACTGGGAACCAGA
CAATTTGCCACCAGATGGAGTTTGAGAATCTTACAGTTGGGGATGGTGAA
TTTAAAGGAGATGTTAAGACTGATTTGATTAACAATGTTAATATTACCAA
ACTGTATTTTGACGCTGTTTATCTGTACAATTACACTGAACAAGATATTC
AAGGAAACTTGGAATTCGAGGAATTGACTGTTTCTCAATATGTGAAAGCT
GACAAGATTAATGGTTTTGACTTGAGTAACGATTTCCTGCTGACCACTGG
CAATCAAGCAGTCTCGTCCAACGTTAAATTCAACAACTCTGTCGTTTTCG
AATCTATCCTTGTCTCCACTGGTTTTGTTGATGGTGTAAATCTGTATCAA
CTAGACCAAGACAGAATCGATCTTTACGACAACATAACCATCTCTGGACT
CAAATCATTCAACAATGTATCAATGACTGAAATTATTGTCACAGACACTT
CAACCGTCAATGGCATTTTACCATCAGATCTGGTTGAAATCAACAAGACC
TCAATGCTGACCGGAGCTAAAACCGTCACCAATTTGACTGTGGATGATAT
TTGGGTTACTGGCAATATCAACAGTGTGGATTTAGTTGATTTCAACAATC
TTGTGTTAAGACGTGATCGCGTACCATTCCAACTTCGAGCAGATCAAATC
TTCACTAAAGACTTAATGATAAATGGCAGCTTAAATGTTACTGGTTACAT
CAACGGTCAATTGGTAAATGGTAACCATAACTACGAACCAAACGTCGGTG
ACGAGATCCAAGGCCAGTTAGATATGTACCTTACAAACGCTGGAAGTCTG
TGTGGAAAAATTTCCTCGCTAACTACACTAGCAGTGGCGGGAGCATACTT
GGAGGGAGTCGAGATATCATCAACAATCAAACTTCCTTCCGAAGATCTCG
GTTCTATTCAATCTACCATTATTGAAGGAAAACATTACATTTCAATCGCT
CGTTCAGAAGTTACAGCTACCTGTGGTTCAGCTTATATTTTGGAGTGTGG
AGAATTTCCTACATGTACTGTATTGCAAAGTATCCAAACGAACGCTGTAC
TGTTGGAATTTTTCTTGTATAACAACCAATCAGCGTTGTTGGTGGATCAT
GAAATTGCAAATGAAACTTATTCTCAATCTGGCTGCAACAAAACAACAGC
AGAAATTTATCTTTGGTCGCCAACCAATCGAATCTTTGAACCATACCAGA
GCGTCAACGAAGAATTGATGGAGTCTGATAGTGCACCGATAATCGATAGT
AAAGGTCTCCTCAAAAGGTCTTTGaacaagaaacttaaagaagAGAGAGT
GACCTCTAATGGCAACGGACATAACAAGACTGAGATCATTGacatcaaaa
catttgaatccAAGGGCAACAAATTCCTTATTGCTTCGGTTGCTAAAGGC
TCTGGTGGTTATCTTGATGTTATGAAAGGCCCCGGCAACAATGTAGGTTC
CTTGAAGAAAAGTCAACGAATCGTCATCAATAGTGGTCGAAAGAATTATG
TTTCTGTCGGAAAACTTAATGGCAAGCCTGTCGTATCTGTGTCTTCGAGC
CGACGTAAAGATATGAAACTACACCGTTTTAACCAAGATACGGAAAAACT
GGAATTTTATCAACAACTTCCTAAAGCTGCCACGTCAGTTAAATTTCAAA
AGGTTAAACAATCGGAATATATCTTGTTCGCAAGTCCGGAAACAGGATTT
GGGCTATGTCCGTGGCAAGGAGCATCCGGTTATACTGACTGTGAGCAATT
GGTTAGTACTGATAATAATCATGTGGACACAATTACAAACGATAGTGGTG
CCTTTGTCATTCTTGGTAAACCGGATAGTCTGAAAATCTATCGGGTAGTG
ATCGAAGGAAGCGGAAATCCATTTGATGGTGATGTGTGCTAAAGCAAAAA
tacactttgaaaaaaataatttttttcttcagttaTTACAATTTcctttg
ttatgtttttttttagataatcaactataaaataatgtaaaaatattttt
ttagaaaaaatcgtataattttgtacataaaaaattaaattaccaTAGTA
TATAAGTATGAAATTTTACTTTCCTTGAAAAATGATATCAGAACA
Run BLAST on NCBI

transcript from alignment at sc0000447:163589..171271-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023228 ID=TCONS_00023228|Name=TCONS_00023228|organism=Clytia hemisphaerica|type=transcript|length=7683bp|location=Sequence derived from alignment at sc0000447:163589..171271- (Clytia hemisphaerica)
GNCGTTAATATTTCAGATTTTGCTGCTAATAAGGTAAATATAATGTATTT
CTAAGAGTCGTATATCGATACTAAATTCTCAAGATGAGCAGGATTTAGCT
ACTATTACATAGTTACGTAGCATCTTACCGCTAGGATTAGACCAAAGTTT
ACGACTTTGGCGACAAAGTAATTGATCTTATCGGAGTTTAGATTTTGTGG
GATTGTTTCTGGGGTATTATAATAGGATTCATAAGAGATTTCTATTGTAA
TACTCCCGAAACAGTCCCACAATGCATCGTTTTTTTAGAAAAACAACTCT
TGTAAGAAAAAAAATCAAAGTGTAGCGCAGTAGCTTTCAATTCTCTTAAT
TTTCTGTAATAGTTTAAACTTCAAAGTTAAATTTATCAACTATTCTCCAC
TAAAGGTCTCATTAACTGGATCAGACATACTAACCAAATCAATCATATTT
ACAAATGGGTTCAACGTTAGTTCTGATGTCAACGTTGGTGGATATGTTGA
TGGTGCAAACATTACTGCGCTCTGGCAATCTGCAAACTCTGACCAAAACA
TTGACGAAGAGATTCAAGGTACTTTGGAGTTTTTATTTGTGCCTTTTAAA
TCACCAACTAGAGCTTCCTTTGTTTTGGAAAGTTTACGCTGAAGCGTTTA
TAAATCAATTTTAAAGGAAATTCTCTGCCGAGCTGGGATCGTGCTTTTCA
GAAATTTTAGTCAAGATCGTTTTGACGTCCATCTAATGTTAATATATTAA
ACAACCGCAACGACCGCATAATATTAGTCGTTGAAATTGACTGTGTTTAG
GTTCGTTGTGTTTTATTCATGAGATTCTACTGAAGGTCAAAACACCAATT
CTTGATGTGCTCGTTATATATATTTAAAACGAATCTGTCTCGTTTCTTTG
ACTTGGTGAAAATGTCCAATCATGAAGCTTTCATCAAACTTACTAATCTT
CTCTCTGATAGAAAGTGTATTTCCTCAATCGTAAAGACAAACCCTAGGAT
TGGTTCTTTTAGCTAAAGGGCTAAATACTCAGTAAATGCCGACCTTTGTT
TATTCTTTTGAAATTTTAGGGTCGAAGATCTTCCAGAATGTGACAGTTAA
AGGACAGTGTAACATTGAATCAGTCAATGGCAAAGACTTCGACAATCTAG
CTTTGAAAAACCAAACCAATAATTTCACTGGCAAAGTTGTTTTCAATGAA
AATGTCACTGTGCAAGGTAAGTGTCAGTTTAACTAGATTATATCATTTTC
TTGATACCAAATAATTAGTCTTTTTTGTCTTGCTTTTCGTATATTTGAAT
CTTGAGGGTCTAAAAGTTATCCGTTACTGGATGCCAGTAGCCTTCACTGG
CGGATTTAAGACAATAGAGCAAGTACGTCGGAAACATGCGAAGAAGTGCG
CCGCTCGTTAAAAGACAATGAAATTACAATAACAAATCTCTTCCTCTGAT
AAGTTTGACAGAGTTAAAAAACGCCAATGGAAGTCAAACCTCTTTAATTC
GAACTCGAACGGGGAATGCTGTTTGATCGAAATACAGAATGTTGTTCAAA
GTCTGTGGAATAGCTTTTTGATACAAATTTAATCGTTTGATCTTTTCAGA
ACACTTGATCACCAGCAGTAACTCTACCATCAACAACCTCATTTTCCAAA
CCGACTTGGTGCTTTCGGACGGTTCACACATCATTACCGGACACAAAACA
TTCGAAAGTATTCATCTGATGGAGAATGTAACAATTCATGGAGATATCAA
TGGTGTGGATTTGAAAACGTTTGTGGAAACTGTTGTTCAGAAAGGAGACA
ATAGAACTGTTACAGGTTAGTCCTTACTGTGCACGCGCCCCTCTTTTTAG
AAGCCTAGAAATAACAAGTTTCTCGAGGGTACACTCTTTTGTAAAAGCCT
GTGATCATTGGATGCCTCTGACTACCCTGGCTTTGGAATTTTGCTATCAA
TGTCTTGTGCTAAGACAAATCCAATACGCTTAGTTTCATAGCTTTACTTT
TTATTGACATCTAAGGCTCGGGGTCAGATTGCTCTTAGATTTGTTCTTCG
GGTTTCGCTCAAATGTCACTTTTGCGTTCTTATAAAATTGTTCTTTAAGA
AACGTTTAAAGGTCTAGTTATTAGTTCAACCTAGAAAGCTATTTTAATTG
ATGGCCTCCCCTTCTAGCTACTTACAACCTGTTGCTTTTCTAGGCAAGAA
GCATTTCCACTCAACTGTCAACGCAGAGCAACTATTGACAGAACTGGTTA
ATAACATTAATGTAGAGGAATTACTGAACAATGTTCTCGTCTTGGTAAAT
GGAACCAAGATCAATGCATCTATGGTGAAATTCCAATCATTGAATATATC
TTCTGTCAGAGTTGAAGGAACCGTCAATGGTAAGTTTATCATTAAGAGCA
TTAAATGTTCGATTTCGACTTGTATCTTTTTTTCGAATATTCTTCAATTC
TAATTCTTCCCTGGCTAGGTGACAATTTTCTGAACAATCGTCCAACATTG
TGCTTATACCGATAGCAACTAATAGAAGCAGTCCATATTTTTACCTTGTT
TTACCTTTAGATTGAAAGTCGACTATATACTTGTCTTCGATGCCTCGTAA
GGTAAATGACCTATCGTATAAAAAAAAGCAATAGATAACTATTTTAATAT
TTATCTACCAGGTTTGAAGATTCCGGATGATTTGGTGTTACTTTCCACTA
TTCAACACATCGAAGGATCCAAGACCTTCACCAACAATGTCACCATACTA
AACATCCACAGTATCAACGTCATCGGTGATGAAGACTTTTCAAAGTTCCT
TCGTGAAGCTGCACAGAATCTCCCTGGTCAAATTGTAGAAGCAAATGTCA
CATTTAAGAATTCGGTCACTTTCACAGATGAGATCACAACTGAAAAATTG
AATGGACAAAGTGTCGATAATTGGTAAGTTATCAAACCCAGTTTGCATAC
AACGTTGTTTCAATGTTCATCTAACGTTATATGGACGTTGTGAGCATTGA
ACAAACGTTGAAACGTTGAAAATATTTCCTTTTGTTAAAATTTCATCAAT
CGGTTCAATTAATTCTGAATAAGCTAATGAACTTCTCCGCATCTTGCAGG
TTAACAACGAACACCGAACAGAACATTACCGGCACGATTCGTCTACTGAA
CGATACCACATTCACTTCATCAATAACTACTGATGTTGTCGACATCACTG
GAAAGGTGAGGATTCTTCTGATATACAAAATTTGTGGCAATGGAATTTGT
TCCCTACTTCATTTGTTCACATCTTAAAAAAAAAGTAAATTTTTCATTTA
AAGGCCGCTCTCAATGTCTGAAAATGGTGCGGTCTTTGCCGGAGCCTCTG
TTGCATATTTAACATAAAATTAGAACTAGTTTTCTGATTCTTGATCGATC
CTTTCATTTCTTGGTCTATGTTATACCCGCTCTAACATTATTTATCAATG
GTTTCATAGGTCAATGGAATCGATATATCAGATCTGGAAGCCTCAGCCAT
TTACAAGAACACCAGTGAGACGATAAACAACACACGATTAGTCTTCGTCA
ATGGTATCGATTGCAAACAAAACCTTTCAGTAGCTGGATTGATCAATGGA
GTCAATTTGACAGAGCTCTACCACAACACTGTCAGAATCTCCAAGAATCA
AACAGTTGCCGGAGAAAAGGTAAGTCTTAGATTTAGATATATTCTAAATT
CTCGCATGCAGTCATGCTTGATACAGAATTTTTTTATTGTACTCCTAGGA
CTGGACAGCAGACTGGCCACCAAATGTATAGTCCAATTTGGTCATTCTTT
CAATTTTGTTTATGTATCCGTAATTTAATCCAAGAACATAACGTTGTCTG
AGATACGCTAGATCGACCTGTGCGTTTGGCTTTGAAAGACTGTCCGCAAC
CTTTATAAAATTTGCAAAAAATATTTTTCATACCAGTTTCTTTTTATCCC
AACTTAAAAAGCTGCCAGCTATGCTCTGGAAACCGAACTACAACTTTAAA
CACTCTTTTCTACTGCAGGTCTTCACAAACACTGTCATACTGAAAGATAC
ACTGACCACATCGGGCACCATCAACAACATTAACCTAACCAAGCTTGAAC
AAGATTCATTGAAAACTGTTGGAGAAGAAACACTCCTTGGAAATGTCACC
TTCATAAATAACGTTATAGTAAATGGTACTCTTAATGCTGGTGGATCTAT
TGATGGTACTGATCTAAATGAATTCTTGGAAAATGCTGCATTTGTAGATT
CGAATGGCACTCTTTCAATCAATGGGAGCTTAACATTCAATAATGTCACT
GCTAATACTGTCCACACCAGCACTGGAGTGAATGGTCTTTCTTTGAATGA
CATTCTTCTTCAAGGTGTTAATCAAACCTTATCTGGCAATGTCAGCTTCA
CCAACGTTTCAGCATCAAGCATCCAAACAGAGTTGATCAACGGTGAGAAT
CTGACCGATGTTTTTGGAAAGGCTTTGAAGACTACAGGAGATCAAAACAT
CACTGGAACCTACATTTTTAATGATTTGTTTGTGGAGGAGAATCTGGCAA
TCAAAACTGTAAACGGTGTTGATTTTGATGGCTTCTTAGAATCTGCCGTT
CCAACTAATGAAACATCTACACTCCAAGGAATTATTCGGTTTACCAGCGA
TGTCGTTATTGACCAATTAGAAACCACTAAATCATTAGGTGATGTAAACA
TCACACGAATGTTAACTGACACCCTTTTGAAGACTGGGAACCAGACAATT
TGCCACCAGATGGAGTTTGAGAATCTTACAGTTGGGGATGGTGAATTTAA
AGGAGATGTTAAGACTGATTTGATTAACAATGTTAATATTACCAAACTGT
ATTTTGACGCTGTTTATCTGTACAATTACACTGAACAAGATATTCAAGGA
AACTTGGAATTCGAGGAATTGACTGTTTCTCAATATGTGAAAGCTGACAA
GATTAATGGTTTTGACTTGAGTAACGATTTCCTGCTGACCACTGGCAATC
AAGCAGTCTCGTCCAACGTTAAATTCAACAACTCTGTCGTTTTCGAATCT
ATCCTTGTCTCCACTGGTTTTGTTGATGGTGTAAATCTGTATCAACTAGA
CCAAGACAGAATCGATCTTTACGACAACATAACCATCTCTGGACTCAAAT
CATTCAACAATGTATCAATGACTGAAATTATTGTCACAGACACTTCAACC
GTCAATGGCATTTTACCATCAGATCTGGTTGAAATCAACAAGACCTCAAT
GCTGACCGGAGCTAAAACCGTCACCAATTTGACTGTGGATGATATTTGGG
TTACTGGCAATATCAACAGTGTGGATTTAGTTGATTTCAACAATCTTGTG
TTAAGACGTGATCGCGTACCATTCCAACTTCGAGCAGATCAAATCTTCAC
TAAAGACTTAATGATAAATGGTAAGTCATTAAAATCAACTAGAGTGAAAA
AGCTAAAAATTCGTTACGAACGTGTAGTGGTGGAGAAAGCTGATTTTAGG
GTCGATTTTGTAACGTCAATCTTCAACCAAGCTAGTTCTGTACTGTAGTT
AAGCTCTAATATACATTCTGATATTTTAGATATCAATTTTTTGCGTTGGT
AAAATATCAATTTCAAAATCCATTTCATATTACTATTTCTTTAAAATCTC
TAAACACCTCTGACCGTTGCTTCCCTTTTATTTTTAGGCAGCTTAAATGT
TACTGGTTACATCAACGGTCAATTGGTAAATGGTAACCATAACTACGAAC
CAAACGTCGGTGACGAGATCCAAGGCCAGTTAGATATGTACCTTACAAAC
GCTGGAAGTCTGTGTGGAAAAATTTCCTCGCTAACTACACTAGCAGGTAA
ACTGATTTTTTAGCTTTTTGAAGTAAAATTAAGAGACCCTTCCAGCAGTT
TTTTATCACCAATGTATAAGGAATTTTTCTTGGTAAATATTATTGGTTGA
AGTTTCAACTTTTAGATTATTTTTTCTTTTCAAATGGAATTTTTGGGGGC
GTATATCTAAACAAATACTTTGTCGAGGACAAGATCTTCTCTTGCATCTT
TTTACTTAGCCTTTACTTGAAACAAAAAAAATTATTCCTCTGAATTATAT
CATGTTATGATATATCATTGTTTCCTTACAGTGGCGGGAGCATACTTGGA
GGGAGTCGAGATATCATCAACAATCAAACTTCCTTCCGAAGATCTCGGTT
CTATTCAATCTACCATTATTGAAGGAAAACATTACATTTCAATCGCTCGT
TCAGAAGTTACAGCTACCTGTGGTTCAGCTTATATTTTGGAGTGTGGAGA
ATTTCCTACATGTACTGTATTGCAAAGTATCCAAACGAACGCTGTACTGT
TGGAATTTTTCTTGTATAACAACCAATCAGCGTTGTTGGTGGATCATGAA
ATTGCAAGTAAGACGTCTCTCCTTTCGATCTTATTGATTAAGTGATGAAA
AAATGCTTGCTGCAGTCTTTTGTGTCATTGCCTGCGAAAAAAAGGAATGG
GAAAACTATTCTTGCCAAAGTCCAGTTTCCTTTACACTACTACACTCCTT
TCCTTTTGCGAACTTTGAGAGACGAAGGAAAATGTATCGTAGGACCAGCC
CTCTTTTAGATTAGCGATAAAGCTAAATTTCGCGTTACTATTTCTAAATT
CTCATCGGAGTTTTGAAGAAACTAAACTTGTTACATTTCCTTTTTTAGAT
GAAACTTATTCTCAATCTGGCTGCAACAAAACAACAGCAGAAATTTATCT
TTGGTCGCCAACCAATCGAATCTTTGAACCATACCAGAGCGTCAACGAAG
AATTGATGGAGTCTGATAGTGCACCGATAATCGATAGTAAAGGTCTCCTC
AAAAGGTCTTTGAACAAGAAACTTAAAGAAGAGAGAGTGACCTCTAATGG
CAACGGACATAACAAGACTGAGATCATTGACATCAAAACATTTGAATCCA
AGGGCAACAAATTCCTTATTGCTTCGGTTGCTAAAGGCTCTGGTGGTTAT
CTTGATGTTATGAAAGGCCCCGGCAACAATGTAGGTTCCTTGAAGAAAAG
TCAACGAATCGTCATCAATAGTGGTCGAAAGAATTATGTTTCTGTCGGAA
AACTTAATGGCAAGCCTGTCGTATCTGTGTCTTCGAGCCGACGTAAAGAT
ATGAAACTACACCGTTTTAACCAAGATACGGAAAAACTGGAATTTTATCA
ACAACTTCCTAAAGCTGCCACGTCAGTTAAATTTCAAAAGGTTAAACAAT
CGGAATATATCTTGTTCGCAAGTCCGGAAACAGGATTTGGGCTATGTCCG
TGGCAAGGAGCATCCGGTTATACTGACTGTGAGCAATTGGTTAGTACTGA
TAATAATCATGTGGACACAATTACAAACGATAGTGGTGCCTTTGTCATTC
TTGGTAAACCGGATAGTCTGAAAATCTATCGGGTAGTGATCGAAGGAAGC
GGAAATCCATTTGATGGTGATGTGTGCTAAAGCAAAAATACACTTTGAAA
AAAATAATTTTTTTCTTCAGTTATTACAATTTCCTTTGTTATGTTTTTTT
TTAGATAATCAACTATAAAATAATGTAAAAATATTTTTTTAGAAAAAATC
GTATAATTTTGTACATAAAAAATTAAATTACCATAGTATATAAGTATGAA
ATTTTACTTTCCTTGAAAAATGATATCAGAACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013066XLOC_013066Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023228-exon-sc0000447-1575043694:171239..171271TCONS_00023228-exon-sc0000447-1575043694:171239..171271Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1575043694:170704..170866TCONS_00023228-exon-sc0000447-1575043694:170704..170866Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1575043694:170056..170202TCONS_00023228-exon-sc0000447-1575043694:170056..170202Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1575043694:169457..169672TCONS_00023228-exon-sc0000447-1575043694:169457..169672Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1575043694:168893..169078TCONS_00023228-exon-sc0000447-1575043694:168893..169078Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1575043694:168349..168610TCONS_00023228-exon-sc0000447-1575043694:168349..168610Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1575043694:168067..168172TCONS_00023228-exon-sc0000447-1575043694:168067..168172Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1575043694:167603..167812TCONS_00023228-exon-sc0000447-1575043694:167603..167812Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1575043694:165852..167253TCONS_00023228-exon-sc0000447-1575043694:165852..167253Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1575043694:165426..165584TCONS_00023228-exon-sc0000447-1575043694:165426..165584Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1575043694:164865..165140TCONS_00023228-exon-sc0000447-1575043694:164865..165140Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1575043694:163589..164573TCONS_00023228-exon-sc0000447-1575043694:163589..164573Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1510915933:171239..171271TCONS_00023228-exon-sc0000447-1510915933:171239..171271Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1510915933:170704..170866TCONS_00023228-exon-sc0000447-1510915933:170704..170866Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1510915933:170056..170202TCONS_00023228-exon-sc0000447-1510915933:170056..170202Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1510915933:169457..169672TCONS_00023228-exon-sc0000447-1510915933:169457..169672Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1510915933:168893..169078TCONS_00023228-exon-sc0000447-1510915933:168893..169078Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1510915933:168349..168610TCONS_00023228-exon-sc0000447-1510915933:168349..168610Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1510915933:168067..168172TCONS_00023228-exon-sc0000447-1510915933:168067..168172Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1510915933:167603..167812TCONS_00023228-exon-sc0000447-1510915933:167603..167812Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1510915933:165852..167253TCONS_00023228-exon-sc0000447-1510915933:165852..167253Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1510915933:165426..165584TCONS_00023228-exon-sc0000447-1510915933:165426..165584Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1510915933:164865..165140TCONS_00023228-exon-sc0000447-1510915933:164865..165140Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1510915933:163589..164573TCONS_00023228-exon-sc0000447-1510915933:163589..164573Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1491911889:171239..171271TCONS_00023228-exon-sc0000447-1491911889:171239..171271Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1491911889:170704..170866TCONS_00023228-exon-sc0000447-1491911889:170704..170866Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1491911889:170056..170202TCONS_00023228-exon-sc0000447-1491911889:170056..170202Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1491911889:169457..169672TCONS_00023228-exon-sc0000447-1491911889:169457..169672Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1491911889:168893..169078TCONS_00023228-exon-sc0000447-1491911889:168893..169078Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1491911889:168349..168610TCONS_00023228-exon-sc0000447-1491911889:168349..168610Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1491911889:168067..168172TCONS_00023228-exon-sc0000447-1491911889:168067..168172Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1491911889:167603..167812TCONS_00023228-exon-sc0000447-1491911889:167603..167812Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1491911889:165852..167253TCONS_00023228-exon-sc0000447-1491911889:165852..167253Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1491911889:165426..165584TCONS_00023228-exon-sc0000447-1491911889:165426..165584Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1491911889:164865..165140TCONS_00023228-exon-sc0000447-1491911889:164865..165140Clytia hemisphaericaexon
TCONS_00023228-exon-sc0000447-1491911889:163589..164573TCONS_00023228-exon-sc0000447-1491911889:163589..164573Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000447supercontigsc0000447:163589..171271 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
395.299	318.925	169.378	173.959	0	0	0.0259471	5.75064e-05	0	0	0.0849394	0	0.151778	0.0330032	0.0587477	0.158171	0.177547	0	0.032143	0.00265861	0.455617	0.000171921	149.893	90.2329	0	0	4.7499	11.1886	110.755	114.025
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00023228 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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