TCONS_00023320 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023320
Unique NameTCONS_00023320
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2666

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023320 ID=TCONS_00023320|Name=TCONS_00023320|organism=Clytia hemisphaerica|type=transcript|length=2666bp
ATAaagatacaaaaataaaaaacaatgtcTGCAATGCAAAGGGATATCAT
GAAAAGCAAATTACCACCTTTGCCAAGTAAACCTGTTGGTCAAGCATCAA
GATTTTCAAGTCTTGTTCCAAAAAGAAATGTCAAAGATTACTCCCCATCC
TCATGGGAAGGATATTTTGATAAACAGCATGATGTCAAAGTTGGAGAGaa
tACATTTAGGTTATATACCAGAGGTACAGATGGACCAGTAGTCTTACTTC
TTCACGGTGGTGGACATTCAGCACTATCATGGGCAGTCTTTACGAAAACC
CTATGTGATATGTGTGATTGCCAAGTTGCTGCTATTGATTTTCGAGGTCA
TGgagACTCAAGTACAACCAATGATACCAACATGGCAGCTGATGTAATGG
CTTATGATATCTGTCATGTTATACTGAATTTCTATGACCAATCACCACCT
CCAATTGTTATGATGGGCCATAGTATGGGAGGTGCAATCGCTGTTCACAT
CGCTGCAAAAAAGATTCTTCCAAATTTGAGTGGCCTTGCTGTTATAGATG
TAGTGGAAGGGACTGCACTAGATGCACTGTCTTCAATGCAAAGTTTTCTT
CGAAGTAGACCTCAGAAGTTTAGTTCTCTGAAACAAGCTATTGAATGGAG
TATAAGGTCAGGGCAGCTGAGGAATCTTACTTCTGCTAAGATATCAATGG
CAGGGCAACTAAAAAAGGTTGAAGGAACGAGCAGTCAATCAAGCAATGTA
TCCTTAGATATTGTTGAAGAAACAGAAGAGGAGGTTGAAAATGAACAAAC
CTCATTTTCCTCAACATCAATAAGCGAGGAACAGTCAGAGTATACTTGGA
GGGTCGATTTAgcagaaactgaaaaatattgGAAAGGATGGTTTGAGAAT
ATGTCATCACTTTTTGTTTCTTGCCCAGTTCCAAAGCTACTTTTACTAGC
AGGAATAGATAGACTTGATAAAGATCTGACAATAGGTCAAATGCAAGGGA
AATTTCAGATGCAAGTTCTACCTAATTGTGGACATATGGTTCATGAGGAT
GTACCAGATAAGGTTGCAGAAATCCTTACTGCCTTTCTATTGAGACAAAA
ATTGACTGTGGCTAAAAGCAATTTTGAAAGacacacACCATCTTGCTGAC
ATATTCTGGTTcatgttgttttatttttttcaaactttataaaaattgta
catagtaaaaagatttttaagttattttctaaaatttcctaaaattaggT
ATcatcttttctcttctttttctcATCAAACTTTGCCCATGCATTCTTTT
GTCAGTTATATTATATTCATGTTGTTAAATCccattcctttttataatag
aaaaGATAGAAAAGCATAATTGAGTAAAATGGCAGCGAAAAGGAAGAAAA
CATCTGATGGAAATAGCAGCACAACAAATAGTAATAAGTCACTGACCGCA
ACCGATGAtattgaagattttgaaaacgagagTGATCCTTTCTCCAAACC
ATGGGAAGGATCTGATGCCATTTTGGTTGTGGAAAACAAGAAGTTATATG
TCCATTCCAACATGCTATCTTTCTCTTCTCCTGTTTTCAAATCCATGTTC
AATTCTGGTTATTTCAAAGAATCGAAAACTAAAACAGTTGATTTGAAAGG
CAAAAAATATGCAGATGTTGTGAATCTATTGAAAATGATATACCCTCAAT
TTGAAATTGACCTGTGGATGACAACAATATCAGAGCTTCAAGTGATGATG
ACACTGATCGAAGAATACCTCATCAAATCATTACGTAAAAGAATTGAAGA
CCACACCCTCTACATTGCCAACATCAAAATACTGAATGGTGGTTATCAAG
AAGTTTGTGCATTGGATCTGATGTTACTGGCAGATCTGTTTAATTTCAAT
GATACTATAGACCAATGTGCGAAATATATAGGTGCTCGATATTATTATAC
TGACCATTCCAATGAATCGACTTTTTCTATGGATACGGACGATGAAGACA
CCGAGGACAGCCCGTCAatgaaagaatttttccaagtccATAAATTAACA
GATAAAGCCAAATTAAAAATCATGGTCAACATTGGTAAGAAGCATTTAGA
GTTTATTGAAGAGGAGAGAGATGATATGTATAAAGAAATGATGACTAAGC
GAACGCGCGAACATTCCTATTTGAAAAGTGAGATGTGTCGCAGGAAAATG
GAAGATTTGAAGATAGTAATGAATGAAATGACGTTATTGATTAAATGAAG
ATTAATTGGTAGGTTTACTTTTATTCAGAGAAGCCTGTTCTTTATGGTGT
TTCCATCTTCAACCTTATGTTGCTTTCTTTTAATCGAACGAAATTGTAAT
GATACGTTTTTGCTTTATCTgggtaaaaataatttgaaattattttgcaa
CCAACTATAACATAGAAAACGTGAATCATGGAATTCAATATAAATGCAGT
ATTTTGATgagaaggaaaaacaaattgatGTGAACAAATTCTTAATTTAT
GAGACAATGCGCAAGGAATCATTTTACGATCAATCAATCTTTGCTTAATT
TAAATGGTGTTTTTGTTGCCTATTTATGGGctgttttttatttcactttt
gtATATGATATTTTTGTATAGGCTTTTTGTAAACTTAGTAATCATGAGAT
GATGTATATACAAGCA
Run BLAST on NCBI

transcript from alignment at sc0000450:248187..258125-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023320 ID=TCONS_00023320|Name=TCONS_00023320|organism=Clytia hemisphaerica|type=transcript|length=9939bp|location=Sequence derived from alignment at sc0000450:248187..258125- (Clytia hemisphaerica)
ATAAAGATACAAAAATAAAAAACAATGTCTGCAATGCAAAGGGATATCAT
GAAAAGCAAATTACCACCTTTGCCAAGTAAACCTGTTGGTCAAGCATCAA
GATTTTCAAGTCTGTAAGTTTTTGTTAAAAAATTCTTGAAACATATTTTG
ATGTATTCTATGTTTAATTCTAATTCTGTCCTTTTTAAAATAACCAAATG
CTGTATAAAATGCTACCTGGAATTATTTATCATCATCATCATGATAAGTA
AAATCATTAACTTTAAATTTTCAGTGTTCCAAAAAGAAATGTCAAAGATT
ACTCCCCATCCTCATGGGAAGGATATTTTGATAAACAGCATGATGTCAAA
GTTGGAGAGAATGTATTTTTTCATTTTATTTCGACTATTTACTAACTTCT
TTCGTTATCTGTCGTACCTGTAAAATGAGTGACCCTGGAGACTAACCTTT
GATAAGTTCTTTGTTAGGAAGTAGTGTAAACCTGTCTGAAGACTAATGCA
TTCACTTTTAACTTTCACTTACTCACACTCCTTTAACCCTTTCTCCTTGG
AGTGATAAGGAGTGCTATGCACAACTTTTATTAGTGAAGTCTAAATTTTA
TTGTGTACAACTGATCACCATCCTCAGAGATTTTTGGAGGTGTGTCTGCG
CTAATCCCAACCTCAAATATGCTGCCTGTAGATACAACAACTTCTCTGAT
AAAGTAGATGCTATGTGTTTAAACTTAGAGCTCTAAACTCTTATCTGAAT
TTTCTATTTAAAGACATTTAGGTTATATACCAGAGGTACAGATGGACCAG
TAGTCTTACTTCTTCACGGTGGTGGACATTCAGCACTATCATGGGCAGTC
TTTACGGTATGTTTTGAAGCTTTAGCATCTTTTGATATTGGTTGATAAAT
TATGGTGGGTGAAGTAATGATAATATTAATAACAAATAAAATGTTCTTTA
CTACACCCATTGTCCCACAAAAATTATTCTTTTTCCATCCTTTTAAAAAT
ATCTTGTTTAATAAACAGGTTCGATTATACATTCTCATTGAAGGTTCTTC
AGATTGAAGATTCTTCAAATAGAGTCTAACCCAAGCACATGATCTTCTAA
TTTTTAGAAAACCCTATGTGATATGTGTGATTGCCAAGTTGCTGCTATTG
ATTTTCGAGGTCATGGTAAGTTTTCAACAGGGACAAACTTTCTAGATAAA
TTAATGAATCTGTATAAAAACATTATGGCAAAGCATTTTTATGACTTTTG
TTAGCTCATCCTTTGTTCCAAATGGTACATTGCTTACTTTTTGATCTTAT
TACCACATTCCTTAGTTTAATACTCTTATCAATGATTCTTTGGTACCTAA
TAAACAGGGAGGGGTTGGAACAATTGGTTTTTGTGGAAAGAAATTGCAGC
AGGGTTGGAATAAAAATGTCTTCGGATTTCCATTAATTGATAAATAGGAA
AAACTTGATAGGTCTGAGAGTATTGTTAAAAAAAGTGAACAAAGCAAATT
TAAAAAAAACTTGAACTTTTTAACAATAGAAAATTTCAGACCAGAGATTT
ATTTAAGGTAATGTTGATAAATATTGAAGCATCGTTAGAGCTTTTGATTC
TTATTAATAAAATCTCTTGCTCTTAATCATCAGTGAACTATTTTCTTGGT
TAAAATACTTGATGTGAGTTCTCACTGTTTCTCACTTAGTTATTGTCTTT
TTTGTTTTTAGGAGACTCAAGTACAACCAATGATACCAACATGGCAGCTG
ATGTAATGGCTTAGTATGTAACACTTGATGAATAAGGATAGTGATAATTT
GTAATGTAAGGGTACAATATAATGTTACTTTACAAATGCATTTACTTCTG
TTCTTTTTAGTGATATCTGTCATGTTATACTGAATTTCTATGACCAATCA
CCACCTCCAATTGTTATGATGGGCCATAGGTATGTGTAAGAATATTTTTT
AATGTAGTAATTATTTGTTTTTTTGAAACTTTTAGTTTTTTGACCTACCC
CGGTGGGGTGGAGGTCCTATAAATTAACCCATGTTCGTTCGTTCGTTAGT
TAGTGTGTTAGTTACCAGCTTTTCTCGAGATTGGCTCATTAGTTTTTTCT
GATTTTTGGCACAAAGGTGCATGACCATAAACCCTCAAATGTGACGGAGC
CCGATTTTCTAAAAAAAAATTTTTTANNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATTTTTT
TTGTATTTTGACCAGTTATGTCTTATGTGTTTCATTGTTTCAATGTTCAC
TGATTAGTTTGATAACCAGGTAGGTCCATAAAAGTATCGCTTGTTCTATA
TTATGTTTATTCTTCTAGCACTGAGGTAGCACACAGCTTACAAAAGATCT
TTCTTTTTCCTATCGGCTTTTTTTTTAGTATGGGAGGTGCAATCGCTGTT
CACATCGCTGCAAAAAAGATTCTTCCAAATTTGAGTGGCCTTGCTGTTAT
AGATGTAGTGGAAGGTTGTGATTTTTCTTTGTTATTATTTGTAATTATTT
CAGACTAATTTTGCTAAGGAAGCTTTTGAAAGTACGACTGTTATTTCAAA
ATCAGCTTTTTAAAAAAGGGGTTATTACATTGGTCATGCCGTGTACACTT
ATATCATGATTTATTGGATCGTCTGATTTATTGGATATTTGTTTCATATA
AGTTTTTTTGACATCCATCAATTACATCAAATCTTTGAAAAACTGGACAT
GTAAATCTATCGAATTCTTTCCCAAAACGAGATATGTTTCCATGTTATAA
TGTAACAAATCAACTTTTCATCCAATGAACTATGTTCAGTATTGTTTTAT
GTTTAATATTGTTTTAACATCTAATTTTCATTCAGGGACTGCACTAGATG
CACTGTCTTCAATGCAAAGTTTTCTTCGAAGTAGACCTCAGAAGTTTAGT
TCTCTGAAACAAGCTATTGAATGGAGGTAAATGCTTTAGTATTCAAGGGA
TAGTCAGACGGTTTGAGATATTTAGCCTGCATAAACGTACGTTCTGTGAT
CCTGAGTAGGATATTAAACTTTGTACTTTTAAATCTTTGTACTGATAATT
TTGTCAAAAGAGTGCTTAGGTAAAATCGTAAATTGCATTTGAAAATTTAC
TTTAAAGCTATCTTACAATTTCCTTTCAGTATAAGGTCAGGGCAGCTGAG
GAATCTTACTTCTGCTAAGATATCAATGGCAGGGCAACTAAAAAAGTAAG
TATCGCTGTTAAAATCTTTGATAGAAAACATTTCAGATCTAGCAATTTTA
TCAAACCAAAGTCTTGTGTTGATAAGTATTTTGTTCCAGATGTTATATAT
TTTCATCTGATTTTAGGGTTGAAGGAACGAGCAGTCAATCAAGCAATGTA
TCCTTAGATATTGTTGAAGAAACAGAAGAGGAGGTTGAAAATGAACAAAC
CTCATTTTCCTCAACATCAATAAGCGAGGTATATTATTCTAAGCTTTTTC
ACTTTCAGAAAAATTCCCATTTTAAACTTATTTAAGTAGCAACTTTGTTT
TCATCATTTATACTTTGGTCATTTTGCTTTTTAGGAACAGTCAGAGTATA
CTTGGAGGGTCGATTTAGCAGAAACTGAAAAATATTGGAAAGGTATGGAA
ATTCCTTTGCTGTTGTACATGTTTTTACTTATCGATTTTGATGATTTCAA
ATGATGTGCTGATTTTTTCTTCTCTCGTTGTAGGATGGTTTGAGAATATG
TCATCACTTTTTGTTTCTTGCCCAGTTCCAAAGCTACTTTTACTAGCAGG
TAAAGATTATCTGTGGCCGGAAAGCTCAGTCGGTAGAGCATTTACCTTAC
AATGGTTGTTGGTACCTTCCGGTTCCTCGGTCACCCCCAACTCAGCCAGC
AAATGAGTAGCTTAGATTGGGTAATCTGATCTATGCAGTAACTTACTGGA
AGCTGTAGGTGTGGCCCTCCATCTCAGCATTTGAACTCCCAGGTCTAGTG
TAAATAGAAAAGACTAGACTAGATAGACTCCCTTGCTCTCGGCTCTGCCA
ACAGCCACCTGATGAATATACTTTTACTTTTGTTTTACTTACCTAAAGTT
TATGCAAAAGAAAACATTAAGTCAAGAATTAAAAGTAATGTTTTATTTGC
CAGTGCAACTTTAAATGTCAGTTAACATTAATATATGGTCTTCTTTCTTA
TTGATTCAAACATGCTTTTACATTTCTAGGAATAGATAGACTTGATAAAG
ATCTGACAATAGGTCAAATGCAAGGTATTTTTAGTATTTAAAATTTTTGG
TATTTTATTTATTGAAAATGTATAACGGGAAAATGAGGAATAGGGTATAA
CCTTTAAGACATTGGGCAAAGGAAGAACTCTTTATTTAATGTTTTTAAAA
ATCTATGTCTTATGTTTTATCCATTTTTGTGTTTTCGCATCAAGTAATTT
ATGATATTGTGATATATCAGACAGTGAACTCGTTGGTAAAGCAGAATTAA
CTGGTCCAATGAAAACTTGTGAATCTTCGTATTTTAGGGAAATTTCAGAT
GCAAGTTCTACCTAATTGTGGACATATGGTTCATGAGGATGTACCAGATA
AGGTAAGCATTTGATCTCGTAAACTCAGTGGCAAAGTTCTGTCTTAAATT
CAAGCCTGAAGCTGTCTTTACAAATATGATACTTCACTTACGACGGAAAC
GCATGATTGTAAGAAGATAGGGTTAGAGGCCCAGTGCAGTGTGCCTAACT
GTAAATAAAACTCTATAATAGAATTGACAAACAAATGGAATGATAAGATC
TATAAATTGTAAAGATGTAAGATTGTTTCCTAGAGGTCAATAGACCTGAG
AAATACACTTCTATAAATAAATAAATATTGTGTGAATAGTTTAAATGTTC
TAGGGTTGGTTGGTAAATTTCTTGAAGTCGGTAGAATCATGTTCTATTTC
TAATGGTACTTTAACTTTGAATTAAATTTCTTCTGTAACGATTTTCTTAG
GTTGCAGAAATCCTTACTGCCTTTCTATTGAGACAAAAATTGACTGTGGC
CAAAAGCAATTTTGAAAGGTAAGCTTACTTTAAGTTAATAATTAGGAACA
TTACATGGTCCACCTCCAGTGATTGCTGGAAATTTTAACCTTTTTTTTTT
TTTTTCAGACACACACCATCTTGCTGACATATTCTGGTTCATGTTTTTAT
TTTTTTTTCAAACTTTATAAAAATTGTACATAGTGAAAAGATTTTTAAGT
TATTTTCTAAAATTTCCTGAAATTAGGTATCATCTTTTCTCTTTTTTTTT
CTCATCAAACTTTGCCCATATGCATACTTTGTTTGTCAGTTATATTATAC
CCATGTTGTTAAATCTCATTCCTTTTTATATTAGAAGAGATAGAAAAGTA
TAGTTGAGTAAAATGGCAGCAAAAAGGAAGAAAACATCTGATGGGAATAC
CAGTGCAACAAATAGCAATAAGTCACTGACTGCAACCGATGATATTGAAG
ATTTTGAAAACGAGAGTGATCCTTTCTCCAAGCCATGGGAAGGATCTGAC
GCCATTTTGGTTGTGGAAAACAAGAAGTTATATGTCCATTCCAACATGCT
ATCTTTCTCTTCTCCTGTTTTCAAATCCATGTTCAATTCTGGTTATTTCA
AAGAATCAAAAACTAAAACTGTTGATTTGAAAGGCAAAAAATATGCAGAT
GTTGTGAATCTATTGAAAATGATATACCCTCAGTTTGAAATTGATCTGTG
TAAGTACCTTGGCCATTTTACTTATTCCAAAGTCTACATAGATTACTGAT
AATTACTGTACCTTTCTTCTTTTCTTTGTAAAACTTTTTCTTCAGATATA
TCTCCTATCTGGGGTTGTTAAGATGTCTCTTAACTTTGAAACTTACATTC
TTCTAATATCTGCTCCAACAATTAAGTCAGAAAAAAGGATCCCTAACTTT
GGGATAAAGGGTTGGCTCTAAGAGTTGGTTAGGCTGGGAAGTGAAAGAGT
GGCTACAACACTAGCGACTAATTGACATGGACAATGGTATAAAATACTGA
CAATTCTATACTTTATTATTTAATTGTTTCTCAAGGGATGACAACAATAT
CAGAGCTTCAAGTGATGATGACACTGATCGAAGAATACCTCATTAAGTCA
TTACGTAAAAGAATTGAGGACCACACCCTCTACATTGCCAACATCAAAAT
ACTGAATGGTGGTTATCAAGAAGTTTGTGCTTTGGATCTGATGTTACTGG
CAGATCTGTTTAATTTCAATGATACTATAGACCAATGTGCAAAATATATA
GGTGCTCGATATTATTATACTGACCATTCCAATGAATCGACTTTTTCTAT
GGATACGGACGATGAAGACACCGAGGACAGCCCGTCAATGAAAGAATTTT
TCCAAGTCCATAAATTAACAGATAAAGCCAAATTAAAAATCATGGTCAAC
ATTGGTAAGAAGCATTTAGAGTTTATTGAAGAGGAGAGAGATGATATGTA
TAAAGAAATGATGACTAAGCGAACGCGCGAACATTCCTATTTGAAAAGTG
AGATGTGTCGCAGGAAAATGGAAGATTTGAAGATAGTAATGAATGAAATG
ACGTTATTGATTAAATGAAGATTAATTGGTAGGTTTACTTTTATTCAGAG
AAGCCTGTTCTTTATGGTGTTTCCATCTTCAACCTTATGTTGCTTTCTTT
TAATCGAACGAAATTGTAATGATACGTTTTTGCTTTATCTGGGTAAAAAT
AATTTGAAATTATTTTGCAACCAACTATAACATAGAAAACGTGAATCATG
GAATTCAATATAAATGCAGTATTTTGATGAGAAGGAAAAACAAATTGATG
TGAACAAATTCTTAATTTATGAGACAATGCGCAAGGAATCATTTTACGNT
TCTAGGAATAGATAGACTTGATAAAGATCTGACAATAGGTCAAATGCAAG
GTATTTTTAGTATTTAAAATTTTTGGTATTTTTGAAAATGTATAACATGT
TTTATTGCTTCTCCCAGGAAAATGAGGAATAGGGTTTTAACTTATATGAA
ATTGGGCAAAGGAAGAACTCTTTTTTGATGTATTTAAAAATTTATATCTT
ATGTTTTATCCATTTTTGTGTTTTTGCATCAAGTAATTTATGATAGTGTG
ATACATCAAACAGTGAACTCGATGGTAAATTGGAATTAACTGGTCCAATG
AAAACCTGTGAATCTTCGCATTTTAGGGAAATTTCAGATGCAAGTTCTAC
CTAATTGCGGACATATGGTTCACGAGGATGTGCCAGATAAGGTAAGCATT
TGATCTTGTACACTCTGTAGCAAAATTCTATCTTAAATTCATACCTTTTA
AAGGCTGTCTTCACAAATATGATATTTCACATTGTGTACATTCCCTAGGG
TCGGTTGGTAAATTTCCTGAAGTCGGTAGAATCCTGTTCTGTTTCTAATG
GCACTTAAACTTTGAATTAAATTTCTTTTGTAACGATTTTTTAGGTTGCA
GAAATCCTTACTGCCTTTCTATTGAGACAAAAATTGACTGTGGCTAAAAG
CAATTTTGAAAGGTAAGAAATCTGCTTACTTTAAATTAATTAATTAGGAA
TCATTACATGGTCCACCTCCAGTAATTGCTGGAAATTTTAACCTTTTTAT
TATTTTTTTTCAGACACACACCATCTTGCTGACATATTCTGGTTCATGTT
GTTTTATTTTTTTCAAACTTTATAAAAATTGTACATAGTAAAAAGATTTT
TAAGTTATTTTCTAAAATTTCCTAAAATTAGGTATCATCTTTTCTCTTCT
TTTTCTCATCAAACTTTGCCCATGCATTCTTTTGTCAGTTATATTATATT
CATGTTGTTAAATCCCATTCCTTTTTATAATAGAAAAGATAGAAAAGCAT
AATTGAGTAAAATGGCAGCGAAAAGGAAGAAAACATCTGATGGAAATAGC
AGCACAACAAATAGTAATAAGTCACTGACCGCAACCGATGATATTGAAGA
TTTTGAAAACGAGAGTGATCCTTTCTCCAAACCATGGGAAGGATCTGATG
CCATTTTGGTTGTGGAAAACAAGAAGTTATATGTCCATTCCAACATGCTA
TCTTTCTCTTCTCCTGTTTTCAAATCCATGTTCAATTCTGGTTATTTCAA
AGAATCGAAAACTAAAACAGTTGATTTGAAAGGCAAAAAATATGCAGATG
TTGTGAATCTATTGAAAATGATATACCCTCAATTTGAAATTGACCTGTGT
AAGTATATTGGTTATTTTACTTTATTCCAAAGTGATAAATTCTGTATCTT
TCCTTTTCTTGGTAAAACTTTTTCTCCAAATAAATCACCTACCTAGGGGT
CTTAAGATGTCTCTTAACTTTGAAAAATGCATTTTTCTAAAGTCTGCTTT
TCCCTAACTCCAAAAATGAAGTCCGAAAAAAGGATCCCTAACTTTGTGAA
AAAGGGTTGGCTCTAAGATAAGAGTTGGTTAGGCTGGAAAGTGAAAGAGT
GGCTACTGCAGCACTAGCGACTAATTGACATGGGCAATGGGTATCAAATA
CGGACAATTCTATACTTATTATTTAATTGTTTCTCAAGGGATGACAACAA
TATCAGAGCTTCAAGTGATGATGACACTGATCGAAGAATACCTCATCAAA
TCATTACGTAAAAGAATTGAAGACCACACCCTCTACATTGCCAACATCAA
AATACTGAATGGTGGTTATCAAGAAGTTTGTGCATTGGATCTGATGTTAC
TGGCAGATCTGTTTAATTTCAATGATACTATAGACCAATGTGCGAAATAT
ATAGGTGCTCGATATTATTATACTGACCATTCCAATGAATCGACTTTTTC
TATGGATACGGACGATGAAGACACCGAGGACAGCCCGTCAATGAAAGAAT
TTTTCCAAGTCCATAAATTAACAGATAAAGCCAAATTAAAAATCATGGTC
AACATTGGTAAGAAGCATTTAGAGTTTATTGAAGAGGAGAGAGATGATAT
GTATAAAGAAATGATGACTAAGCGAACGCGCGAACATTCCTATTTGAAAA
GTGAGATGTGTCGCAGGAAAATGGAAGATTTGAAGATAGTAATGAATGAA
ATGACGTTATTGATTAAATGAAGATTAATTGGTAGGTTTACTTTTATTCA
GAGAAGCCTGTTCTTTATGGTGTTTCCATCTTCAACCTTATGTTGCTTTC
TTTTAATCGAACGAAATTGTAATGATACGTTTTTGCTTTATCTGGGTAAA
AATAATTTGAAATTATTTTGCAACCAACTATAACATAGAAAACGTGAATC
ATGGAATTCAATATAAATGCAGTATTTTGATGAGAAGGAAAAACAAATTG
ATGTGAACAAATTCTTAATTTATGAGACAATGCGCAAGGAATCATTTTAC
GATCAATCAATCTTTGCTTAATTTAAATGGTGTTTTTGTTGCCTATTTAT
GGGCTGTTTTTTATTTCACTTTTGTATATGATATTTTTGTATAGGCTTTT
TGTAAACTTAGTAATCATGAGATGATGTATATACAAGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013112XLOC_013112Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023320-exon-sc0000450-1575043694:258013..258125TCONS_00023320-exon-sc0000450-1575043694:258013..258125Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1575043694:257764..257851TCONS_00023320-exon-sc0000450-1575043694:257764..257851Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1575043694:257270..257362TCONS_00023320-exon-sc0000450-1575043694:257270..257362Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1575043694:256961..257018TCONS_00023320-exon-sc0000450-1575043694:256961..257018Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1575043694:256363..256414TCONS_00023320-exon-sc0000450-1575043694:256363..256414Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1575043694:256197..256265TCONS_00023320-exon-sc0000450-1575043694:256197..256265Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1575043694:255212..255297TCONS_00023320-exon-sc0000450-1575043694:255212..255297Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1575043694:254750..254840TCONS_00023320-exon-sc0000450-1575043694:254750..254840Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1575043694:254481..254546TCONS_00023320-exon-sc0000450-1575043694:254481..254546Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1575043694:254248..254359TCONS_00023320-exon-sc0000450-1575043694:254248..254359Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1575043694:254084..254141TCONS_00023320-exon-sc0000450-1575043694:254084..254141Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1575043694:253927..253992TCONS_00023320-exon-sc0000450-1575043694:253927..253992Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1575043694:253452..253496TCONS_00023320-exon-sc0000450-1575043694:253452..253496Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1575043694:253124..253188TCONS_00023320-exon-sc0000450-1575043694:253124..253188Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1575043694:250164..250231TCONS_00023320-exon-sc0000450-1575043694:250164..250231Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1575043694:249478..250062TCONS_00023320-exon-sc0000450-1575043694:249478..250062Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1575043694:248187..249137TCONS_00023320-exon-sc0000450-1575043694:248187..249137Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1510915933:258013..258125TCONS_00023320-exon-sc0000450-1510915933:258013..258125Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1510915933:257764..257851TCONS_00023320-exon-sc0000450-1510915933:257764..257851Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1510915933:257270..257362TCONS_00023320-exon-sc0000450-1510915933:257270..257362Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1510915933:256961..257018TCONS_00023320-exon-sc0000450-1510915933:256961..257018Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1510915933:256363..256414TCONS_00023320-exon-sc0000450-1510915933:256363..256414Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1510915933:256197..256265TCONS_00023320-exon-sc0000450-1510915933:256197..256265Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1510915933:255212..255297TCONS_00023320-exon-sc0000450-1510915933:255212..255297Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1510915933:254750..254840TCONS_00023320-exon-sc0000450-1510915933:254750..254840Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1510915933:254481..254546TCONS_00023320-exon-sc0000450-1510915933:254481..254546Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1510915933:254248..254359TCONS_00023320-exon-sc0000450-1510915933:254248..254359Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1510915933:254084..254141TCONS_00023320-exon-sc0000450-1510915933:254084..254141Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1510915933:253927..253992TCONS_00023320-exon-sc0000450-1510915933:253927..253992Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1510915933:253452..253496TCONS_00023320-exon-sc0000450-1510915933:253452..253496Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1510915933:253124..253188TCONS_00023320-exon-sc0000450-1510915933:253124..253188Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1510915933:250164..250231TCONS_00023320-exon-sc0000450-1510915933:250164..250231Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1510915933:249478..250062TCONS_00023320-exon-sc0000450-1510915933:249478..250062Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1510915933:248187..249137TCONS_00023320-exon-sc0000450-1510915933:248187..249137Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1491911889:258013..258125TCONS_00023320-exon-sc0000450-1491911889:258013..258125Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1491911889:257764..257851TCONS_00023320-exon-sc0000450-1491911889:257764..257851Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1491911889:257270..257362TCONS_00023320-exon-sc0000450-1491911889:257270..257362Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1491911889:256961..257018TCONS_00023320-exon-sc0000450-1491911889:256961..257018Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1491911889:256363..256414TCONS_00023320-exon-sc0000450-1491911889:256363..256414Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1491911889:256197..256265TCONS_00023320-exon-sc0000450-1491911889:256197..256265Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1491911889:255212..255297TCONS_00023320-exon-sc0000450-1491911889:255212..255297Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1491911889:254750..254840TCONS_00023320-exon-sc0000450-1491911889:254750..254840Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1491911889:254481..254546TCONS_00023320-exon-sc0000450-1491911889:254481..254546Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1491911889:254248..254359TCONS_00023320-exon-sc0000450-1491911889:254248..254359Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1491911889:254084..254141TCONS_00023320-exon-sc0000450-1491911889:254084..254141Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1491911889:253927..253992TCONS_00023320-exon-sc0000450-1491911889:253927..253992Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1491911889:253452..253496TCONS_00023320-exon-sc0000450-1491911889:253452..253496Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1491911889:253124..253188TCONS_00023320-exon-sc0000450-1491911889:253124..253188Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1491911889:250164..250231TCONS_00023320-exon-sc0000450-1491911889:250164..250231Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1491911889:249478..250062TCONS_00023320-exon-sc0000450-1491911889:249478..250062Clytia hemisphaericaexon
TCONS_00023320-exon-sc0000450-1491911889:248187..249137TCONS_00023320-exon-sc0000450-1491911889:248187..249137Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000450supercontigsc0000450:248187..258125 -
Expression
No biomaterial libraries express this feature.
Blast
[Close]
BLAST of TCONS_00023320 vs. Swiss-Prot (Human)
Match: PPME1 (Protein phosphatase methylesterase 1 OS=Homo sapiens GN=PPME1 PE=1 SV=3)

HSP 1 Score: 364.385 bits (934), Expect = 1.455e-116
Identity = 182/348 (52.30%), Postives = 246/348 (70.69%), Query Frame = 1 
Query:  133 KDYSPSSWEGYFDKQHDVKV----GENTFRLYTRGTDGPXXXXXXXXXXSALSWAVFTKTLCDMCDCQVAAIDFRGHGDSSTTNDTNMAADVMAYDICHVILNFYDQSPPPIVMMGHSMGGAIAVHIAAKKILPNLSGLAVIDVVEGTALDALSSMQSFLRSRPQKFSSLKQAIEWSIRSGQLRNLTSAKISMAGQLKKVEGTSSQSSN------VSLDIXXXXXXXXXXXXXXXXXXXXXXXXXXYTWRVDLAETEKYWKGWFENMSSLFVSCPVPKLLLLAGIDRLDKDLTIGQMQGKFQMQVLPNCGHMVHEDVPDKVAEILTAFLLRQKLTVAKSNFERHTPSC 1146
            +D+SP  W  YF+   DV+V    G++TFR+Y  G++GPV+LLLHGGGHSALSWAVFT  +     C++ A+D R HG++   N  +++A+ MA D+ +V+   Y   PPPI+++GHSMGGAIAVH A+  ++P+L GL +IDVVEGTA+DAL+SMQ+FLR RP+ F SL+ AIEWS++SGQ+RNL SA++SM GQ+K+ EG +S   +      +  +  E+ E      +        +++   YTWR++LA+TEKYW GWF  +S+LF+SCP+PKLLLLAG+DRLDKDLTIGQMQGKFQMQVLP CGH VHED PDKVAE +  FL+R +       F+   P C
Sbjct:   39 RDFSPVPWSQYFESMEDVEVENETGKDTFRVYKSGSEGPVLLLLHGGGHSALSWAVFTAAIISRVQCRIVALDLRSHGETKVKNPEDLSAETMAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTASSNLVPSLLGLCMIDVVEGTAMDALNSMQNFLRGRPKTFKSLENAIEWSVKSGQIRNLESARVSMVGQVKQCEGITSPEGSKSIVEGIIEEEEEDEEGSESISKRKKEDDMETKKDHPYTWRIELAKTEKYWDGWFRGLSNLFLSCPIPKLLLLAGVDRLDKDLTIGQMQGKFQMQVLPQCGHAVHEDAPDKVAEAVATFLIRHRFAEPIGGFQCVFPGC 386
The following BLAST results are available for this feature:
BLAST of TCONS_00023320 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PPME11.455e-11652.30Protein phosphatase methylesterase 1 OS=Homo sapie... [more]
back to top