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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00023331 ID=TCONS_00023331|Name=TCONS_00023331|organism=Clytia hemisphaerica|type=transcript|length=1374bp
cccaaatcaatttttgattggACAGTGTGTCCGACCACCTAAATATTGTT
ACTTCGAGCCCTGAACTTAATAAAACCTAAACTATTACACCGAAAACCTT
CAAACAATGACCCCTTGCtcacaacttactgaaactgtgaaattgcaatt
caggTACTAAACGGTGATTCActtgatcaaatacttgctagaCTAGAATA
GGTTTGATGACAAGTTCAATTGTGAAATCTTtaggtccaaaaattttgat
tttttgaagggatttttaataaaattttgaatacttCGAATTTGACAACT
TTTTGATAATTGAAATCCTTGAAATTAGGTACTGTATTTTATGAAAGTTC
ATTTATAAGAGGTAAAAAAGTGACTTAAACaatatattgaatttaaaagt
cTGGTGGCTAAGACAGCCCAAAGTgcaactttgtaggttttaCTGGCTAT
CCACTGGtaaattatatttgattgtccaTGCCAAAAGATACTTCTTTAGT
TTTAAGAATAATCTGTGTTGTTTTGAAACTTACCCCCAGATTGTTTTGGT
TGTTTGAAAGTATTGCAAAAAACACGCCTATGAACCTGACTGATCGAAAG
tgtaattacataaattattgtggaaagCCAATGCTTAAAAAGGGGGGTGT
ACGGGGCTTCCAAAAACCGATAAACCGCGCAAAAATAGCTCTTCCACCGA
TAAACCCACAAAGTTTATCCTTTTCACCGACACCGACTTTTTACTCTTGC
TTCAAAAGATGTGACTCTTAAAAGTAGACAGAATGTATCCTCGAATTTGT
TATAACAAAACTAACCCATAACCCCCAATGCATGCAGGCACGAATTTAAA
TTGTTGCTGAGGGGGCAgcaggaggcgcaaccatggtttgcaccgacgga
aaatttttcagctttctagctttcgtttaggctaaaaacgACCTATTTTA
GacacttttttccgaaaataagcTGACTTAGTGAGTCAATACTATTCAAT
ACGGGTTTCTGCATTTATTATGTACTTAAAGGAGGGACAATTCTAAAGAA
AGCATTTTTGTTGTGTGGTAGGCCTCAATGGagaaaacttttgtattttc
tcaACCCTCCATGCGAGCGAAGTGagcgaaaaaaaaaactgatggaCTTA
TTTGTACAAATTACTTGTCCACGATTTTAAATTAAAGAATTATAATCAAT
AAAATTGTGTGTCTGGAAAAAGCAACTTTTGAGGCCCAAAAAGTATTACT
GGGCTGgagtattttattttctgctgGTCATATATACACAGTAGAGTGGT
GGGTAGGTCAAGGCTGGGGaggcaaaagtagaattttggcACCCCTTGTA
GGCTTATTCAGGCGCCCCCTTTTT Run BLAST on NCBI transcript from alignment at sc0000450:16746..18119 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00023331 ID=TCONS_00023331|Name=TCONS_00023331|organism=Clytia hemisphaerica|type=transcript|length=1374bp|location=Sequence derived from alignment at sc0000450:16746..18119 (Clytia hemisphaerica)
AAAAAGGGGGCGCCTGAATAAGCCTACAAGGGGTgccaaaattctacttt
tgcctCCCCAGCCTTGACCTACCCACCACTCTACTGTGTATATATGACca
gcagaaaataaaatactcCAGCCCAGTAATACTTTTTGGGCCTCAAAAGT
TGCTTTTTCCAGACACACAATTTTATTGATTATAATTCTTTAATTTAAAA
TCGTGGACAAGTAATTTGTACAAATAAGtccatcagttttttttttcgct
CACTTCGCTCGCATGGAGGGTtgagaaaatacaaaagttttctCCATTGA
GGCCTACCACACAACAAAAATGCTTTCTTTAGAATTGTCCCTCCTTTAAG
TACATAATAAATGCAGAAACCCGTATTGAATAGTATTGACTCACTAAGTC
AgcttattttcggaaaaaagtgtCTAAAATAGGTcgtttttagcctaaac
gaaagctagaaagctgaaaaattttccgtcggtgcaaaccatggttgcgc
ctcctgcTGCCCCCTCAGCAACAATTTAAATTCGTGCCTGCATGCATTGG
GGGTTATGGGTTAGTTTTGTTATAACAAATTCGAGGATACATTCTGTCTA
CTTTTAAGAGTCACATCTTTTGAAGCAAGAGTAAAAAGTCGGTGTCGGTG
AAAAGGATAAACTTTGTGGGTTTATCGGTGGAAGAGCTATTTTTGCGCGG
TTTATCGGTTTTTGGAAGCCCCGTACACCCCCCTTTTTAAGCATTGGctt
tccacaataatttatgtaattacaCTTTCGATCAGTCAGGTTCATAGGCG
TGTTTTTTGCAATACTTTCAAACAACCAAAACAATCTGGGGGTAAGTTTC
AAAACAACACAGATTATTCTTAAAACTAAAGAAGTATCTTTTGGCAtgga
caatcaaatataatttaCCAGTGGATAGCCAGtaaaacctacaaagttgc
ACTTTGGGCTGTCTTAGCCACCAgacttttaaattcaatatattGTTTAA
GTCACTTTTTTACCTCTTATAAATGAACTTTCATAAAATACAGTACCTAA
TTTCAAGGATTTCAATTATCAAAAAGTTGTCAAATTCGaagtattcaaaa
ttttattaaaaatcccttcaaaaaatcaaaatttttggacctaAAGATTT
CACAATTGAACTTGTCATCAAACCTATTCTAGtctagcaagtatttgatc
aagTGAATCACCGTTTAGTAcctgaattgcaatttcacagtttcagtaag
ttgtgaGCAAGGGGTCATTGTTTGAAGGTTTTCGGTGTAATAGTTTAGGT
TTTATTAAGTTCAGGGCTCGAAGTAACAATATTTAGGTGGTCGGACACAC
TGTccaatcaaaaattgatttggg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00023331-exon-sc0000450-1491911889:16746..18119 | TCONS_00023331-exon-sc0000450-1491911889:16746..18119 | Clytia hemisphaerica | exon |
| TCONS_00023331-exon-sc0000450-1510915933:16746..18119 | TCONS_00023331-exon-sc0000450-1510915933:16746..18119 | Clytia hemisphaerica | exon |
| TCONS_00023331-exon-sc0000450-1575043694:16746..18119 | TCONS_00023331-exon-sc0000450-1575043694:16746..18119 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000450 | supercontig | sc0000450:16746..18119 . |
Blast
The following BLAST results are available for this feature:
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