TCONS_00023363 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023363
Unique NameTCONS_00023363
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1359

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023363 ID=TCONS_00023363|Name=TCONS_00023363|organism=Clytia hemisphaerica|type=transcript|length=1359bp
CTTTCGTCAACTTGCATTATTTGAAATAACACCTTCAGCTCGAACATATG
TATTATAGCTGTTCATGGACCCAGTATAGGTTATTGTAAATGGAGAAGAC
CAACGCATTAGACACCAACAAAAGTAAATTAGAACCCAAATATTCCTTAA
GTCCATTCTATACATTCCTCGAAAGTCCAGAAAAACGTCAACAACAGCCT
TTGACACTCGATATCTTCGCCCTCAGTAAGAAAACACAAGAACTTCAACA
CCATCAAGATAGTATCTTTTATGATGAGGATAATAGTTCTCTTGTCCAAA
CTTACGACTCCATTTTTGGACaatttaaagaagaaaaagaaccaGAGAGC
AATTCGTGGAATCACTTGAAAATGATTGGTTTGATATTCTTGAGCAAAGT
TGGTTGCACATTAATGCTGATGATGTTGTTGGCTTTACCAATGTCTATGG
TCGTTATTGGAGTGTCATACAAAGATTTTTGTCCGATCGAACCATTCATT
CCGATCTATCTCATTGTCGGTGGATCGTTCGGTATCATCAAAATGCTCTC
CATCATAATTCAGCGAATCACATATAACGGAGATATCTTTCAAAGTGATA
AAAGCAACGAGGAGGAGCGTCCAATCGCATGGTTGTTCGTTGACGGCGTA
TTAAACTTGTTTTTATTCACGTGGTTCGTGGCGGGAAATATATGGGTGTA
TTCCAAATATAAACCAAATTACACGCCTCCGCCTCATCAACCATTCAACT
ATTGTAATAAGACTGTGTACGTGTTTGCTTTTTGGGTAATCACAACCAGT
TACCTGATGTTGGGATTGATTTGTTTGTGCACGTGTTGCTTGGCCGCGTG
CGCGAGCTGTACGGCGTTCTTTTTAACGAAAGCATCGAATTCAGAGGCGG
GTGCAGAAGATGAGGTGAATGGTGGTGATAGGTTTATTGATAACCGGTTT
CGATAAAGAATCTATGCTTCATGTTGTTTGGTGTAATTTTGTCTGAATTC
AATATTTCTGAGAAATATCACTATGTGATTTATTGTGATGTTCGAATCTT
GCTATCTGAAAGAGAAAATTATTTACTGGTCAATATGTAACTCATTGGGA
AATATTGTTAGACCTTCATTTCTTTGTTGGCAGGATAGAGATAATCAAAT
AAGGTTTTTTATTAATTGATTAATTTATGACGTAATAACCTTTCACGGGG
TCAAAAGTTCTTAGATTCATACAACATTCATCAAACATTCATCAAAAACC
ACCTAAGGCCTAGATAACCCTCAGTGACCAGGGTAAGTTTTGAAATTCAC
CGgctatgaaaaaagaaaaatcacatCGGGTTGTCGGTGTCGACATCTTA
AAAACTAGT
Run BLAST on NCBI

protein sequence of TCONS_00023363-protein

>TCONS_00023363-protein ID=TCONS_00023363-protein|Name=TCONS_00023363-protein|organism=Clytia hemisphaerica|type=polypeptide|length=288bp
MEKTNALDTNKSKLEPKYSLSPFYTFLESPEKRQQQPLTLDIFALSKKTQ
ELQHHQDSIFYDEDNSSLVQTYDSIFGQFKEEKEPESNSWNHLKMIGLIF
LSKVGCTLMLMMLLALPMSMVVIGVSYKDFCPIEPFIPIYLIVGGSFGII
KMLSIIIQRITYNGDIFQSDKSNEEERPIAWLFVDGVLNLFLFTWFVAGN
IWVYSKYKPNYTPPPHQPFNYCNKTVYVFAFWVITTSYLMLGLICLCTCC
LAACASCTAFFLTKASNSEAGAEDEVNGGDRFIDNRFR
Run BLAST on NCBI

transcript from alignment at sc0000452:239682..257909+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023363 ID=TCONS_00023363|Name=TCONS_00023363|organism=Clytia hemisphaerica|type=transcript|length=18228bp|location=Sequence derived from alignment at sc0000452:239682..257909+ (Clytia hemisphaerica)
CTTTCGTCAACTTGCATTATTTGAAATAACACCTTCAGCTCGAACATATG
TATTATAGCTGTTCATGGACCCAGTATAGGTTATTGTAAGTAATTATCGC
AcaaaattattaatttttcgTGTACAGTGTACGGAGGATTTGTGTTTACT
ATAATTCAGGGGTCGCCTTCTTGCTTCTCAAGTTTGTTAAAGTAATAATG
ATGATAATAAAAAGGAATAATAAAAGCGGAAAACAACAAAAGCTTACAAT
TTGGGGTCGAAAAGCATCTTCACTCAAGAGACGAGCTTTTAATTTAAATC
GTGCACACGGGATGTAAATAAGCATTGACAAGAAAAgatatttgatttgt
tttgaaatttattgttttaaatTTAGAATCAGATAAGATCTACTAACGAA
CCTACAGTACCATGGACCTcttaaagaaatctttttttcaacaGGTAAAT
GGAGAAGACCAACGCATTAGACACCAACAAAAGTAAATTAGAACCCAAAT
ATTCCTTAAGTCCATTCTATACATTCCTCGAAAGTCCAGAAAAACGTCAA
CAACAGCCTTTGACACTCGATATCTTCGCCCTCAGTAAGAAAACACAAGA
ACTTCAACACCATCAAGATAGTATCTTTTATGATGAGGATAATAGTTCTC
TTGTCCAAACTTACGACTCCATTTTTGGACaatttaaagaagaaaaagaa
ccaGAGAGCAATTCGTGGAATCACTTGAAAATGATTGGTTTGATATTCTT
GAGCAAAGGTAAATAGTTAGAGGAGGCGgttaaaatttcattgaaacgtA
TAGATTATTTCAGATTAACCTTTTTTAAAAGTACCAATGTCgaatatatc
agacatgggctatgtaggagtaggagggcgaagccctcctgtaatacCCA
GTTTGAGTTATAAATCGTCATTTTTCGTAAAACTATCTCTATAATATcca
acactgggcgaaataaaagacttccaatcctggaaaaatattgaaaatgt
gatatttccattaaaaataagttagtttgatattcagtttgatattcagt
ttgatattcgaaattcagtttgatattcgaCTTTTTGCTCTACGAAGGAG
GGCAGACAtttgttgaacttctaaacttcaaaagatgttagccactatta
ataagtatcatttccaccaaaaatggtcgctctccacctcagtggggNGG
CAGACAtttgttgcacttctaaacttcaaaatatgttagccactgtTCCT
AAGTATCAtctccaccaaaaatggtcgctctccaccgcaatgggggagct
ctaaaattatacaaccacttagtttgaaaatcgactaattagcgttttga
gcccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaggagctcta
aaattatacaaccacttactttgaaaatcgactaattagcgttttgagcc
ctatgatggAGAGCAGTCAtttgttgcacttctaaacttcaaaatatgtt
agccactattcctaagtatcatttccaccaaaaatggtcgctctccaccg
caATGGGGgtgctctaaaattatacaaccacttatagtttgaaaatcgac
taattagcgttttgagccctatgatggAGAGCAGTCAtttgttgcacttc
taaacttcaaaatatgttagccactattcctaagtatcaNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAccgcaatgggggag
ctctaaaattatacaaccacttactttgaaaatcgactaattagcgtttt
gagccctatgatggAGAGCAGTCATTTGTTGCACTCCTGCTTATTCCAcg
ccccctacaattaagcgtAGACGAGTAATATTTAGGTCAAAGTCAAGAAA
tgtaaaattttgaacattttgaactatttgttttgttttatttctataGT
CCACGCAATAACTGTAAACACTGGGAAAACTTAAATTTCCAAAGAGgtga
ttttgtctttttttaaacttaagAGCACCTACCTTCTTTCATTGCCCTGT
CCCGCCATGTCtaaaatgaaaactttcctGTCTCCTCTTCAGTTTTACCA
CCTAGGCTCCCGCAAATGTATCCAACATTGCTTTGACTAATAATCTTTAA
CTTCTGATTCTGTTAAGCagagaaaagttttttaaaggaagaaatagACT
TTCTAAAAAGGTTTTTACCAAATAATCATTTCACTGTCTATCTCCCAAAT
CGGTCATATACTTGctaaaatgatcaaaatatgTTTTGCAATTTCACCTT
CGATTCGTTAGATGCTCCTCCAAGGTTTCCCTCTGATTTTCCTGGGTCTG
GTTGATTATTTATAGAGATAGATTTTTATGCGTGTCGCAACTTTGACTCC
GGATTGACTCCAGCGGTTTCTTTGCTTTCGAGTGGGATACTTCTTAAGAT
TATTACGGTACATTTTACTCTACTTTGTGAAAACCAcggtgggggggggg
taaattaaAATGTTCGTAAATAATTAGTAGCAGGGTATAAAGGTACCTAA
GAGTATTTCCAATTCAAGTGTCTTGTTTCTAGCGTTATGCAGAGATAATA
GTGCATCGgtataatcacgacgacggacgaaaatgTAACACTTCACTTAT
TGCGGTTAGAAATCGGTAAATACCGTTAAAGTAAAAGACTTGCTAATTCT
TGAATCATTCCATTGACATTCCTGTTGTTTTTGCTGGGCATACCGGTTAA
CAACAGTACACTACTACTTGAGAGTTTTCATTTCCTTAATTTAATTTCTT
TAGTTACACATATCATCAAATCCATCCTTGATGTTCAGGGTTAAAGAGAA
TAGAACAAAAAGTACGGGTAGGGTAATGCCAAGAACTCACTTAGAAATTA
TTGtaatttattttataatttaatGATTTAATTTATATCAGAAAGTTTCC
CTAAAGACGAGAAAGTTTATCACTTTGATTGTAATTTGCGACGATGTACG
ATGTTACGGCATTCTTCATTCGTTCCGTGACACTTTTCTACAAGGTATAT
GGTAACCCGAAAGCAATGTATATATCCCGAGATAAAGTAGCCTTTAAGGA
TATCGGCTTTTTTCTTNGGTAAGATTTCCTTCTCCTCTAACTCTGTACCC
AACATATTGTACATGTCCTACATGTCATGTACTTCCCCTGTTTCCCACAA
AACACACGGATTACACTATTGGACAATAGTACATATGTACATGCTATGGT
TGGACACTCTCTCCCAATTATTTTCGTTATAAATTGTAGTTTTGGTTCTG
TTTCGACATGGACTCTGGACATGTAAAATAAGTATGTACattatatggcc
cccaaaacgtcgatcaaatttaaaatttctctcaaatctagaggaaaaga
ggttttacaaaaatttttgctgcatgaaaaactttaatatctctacttta
tttcccggaagtttttttttttaaattttcaatttcaacaatatttttca
attgcttaaagataggtagcttttttctaacggcccccaaaacggaggtt
tgcgattttagcgatttctcgagatatctttaagatatgaatacaaaatt
ttgaccatagtttggaaatgtgatttagagggttctgggcataaatttgt
ttgataaaatttttacagtatagccctggttgtcaaaatggaggtttggg
gcccccaaaacgtaggtgtagttaaaatcaaattattaagcccagtggta
atagggggaaaactacgaacatatttgtgttttgccttaaatttacgacc
cgatggatgtaaaatttatgatttttatgaaatatttcaagatttttgat
attgcaaagtccaaactgaaattttataaattttcaaaatgacaattttg
atttaaaaacgtCTTAAtgaagtttctgaaaaccaatctctttttaAGAT
AGTCTCATTTATGTATGGAataggctgtgaaaattttagagaaagcttat
tgaaactgaaaatattaagctttaaaggtatttttctcctatattttgca
aaaaaatgatagaatttgccctttttgctgattcagcgaaaaaatttata
tataatgttaattttttgttataaactattaactcaagctgataggaatg
gaattccaagaatttttgctgtttctcataattagaattttcggttttat
caatgctgattctagggtcccaatatactggttgacctttaagatgcgat
atcttttacccatcatctaaagtcacagatgtatctgcattttctgaacg
gcattaggtgtagaaagtttcctataccccattttcattacttattttca
atatccaagcagctagagtgagttatatgcaatttttatctaattttggt
gttaaaatacaCTGTAATCGGATTCATcgtattaaaaatatttcgtttag
acgcaaatatgttattttgaagctgtctccaaaaccatcaaaaacatgct
catttttaagtataaccatcattctctcaaagtaaacaaaaattgtttaa
ttctgataaatctacaagtcagaatcctcatttttaTAACGACCTCCGTT
TttggggccgtctccgttttggggacCATATACTGTAGTGTTTGTAAAAT
AATAGCAGTTCTCGTGATAAGTACGTTGTATGCATGTTTGGAAACTTTGA
GTGTACAGCTTGTGgcccgggggggtacttaggcaaatggagggtacggt
atgtgccgcccttaagggtacctttttggacttccaaagtcccgccaagg
gtcggaaaaatcagaaaatcaaatttcagtcccactaagggtcggaaaaa
taggaaaatttcaactttttacacccggaaagatcaaaatttggtcaaat
ttgtcccgctaagggtcgtaaaattcctaaaaatttcctttgttttctcc
tttttagtcccggtaagggtccaaagttcgaaagtcgggcggcacccccc
cgtcagctcgcaacccttagtaccccctccccccggggcTTGTGGTTAAC
TTTGTTCGCGAGTTTTGATATTGTGCTTGACTATGTCTAGATGTCTTGCA
GAGAACCCGAGCTAATTTTGGTGTAGCATCTACcatctttaaaagttttt
tccaCTCCTTTCCTCCCGTTGAACCGTCAAAATGCCCTACCAATGAGAAG
AGCGAGAACGAGGAGAAACCAATTTTCGCATTATCTTCGAGTGCGCGAAA
ATTCGCATTTCAGGTATTGTATAATGCCTGAAAAAAAACGCGGCAGGTTC
GACTTCTTGTTGAACACCGTGTGTATAATTTTGCTCCTACAAATGATGGT
CACTTGGGAGTCAACCTTGACTTTTGACTTTCTGATCTAACGTcgacatt
caaaatttttatattcGAAGTcgacagtcaaaaaaaaacaatcaataaGT
AGTCATTACTTTCTTTCCTTCGGAAGCTAATGTTGACTAGGATGGCTGTT
CCATTGAAATCAGAAAGAATTTTTACAAACGATAttatcaagttaaaaaa
tagtGATGAAAGTCGACAAAAATTTTGTGTCGACTTTCGTaccaaaagtt
ttgataaaacgTTAGGTCGACTAATTGTAGTAATGttaacataacttttt
tttcctcaattttcCCTTAATATCGTAAATAATTCCACCATCTACTACGC
AAGGTCGACTTACCGCTATAATTATAATTATACACTGTCGACGTAAGTAA
TAATTTAACGTATTGTATATACTTAATTTATGTTATGAAAAACGAAAATA
CTTAAACTTATGTTATTGATAGAAAAACAATGCCACTCAAAATTGACTGG
TGCAAATTACTCCGACTAGATTTATTGTAAAGAAATTACAACAtgtactt
ttataagaacaacgtaTATTAAGAAGATGAGGTTTTGAAGNNNNNNNNNN
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tggagagcgaccatttttggtggaaataatacttaggaatagtggctaac
atattttgaagtttagaagtgcaacagatgACTGCTCTCCATCATAGGGC
ttaaaacgctaattagtcgattttcaaactaagtggttgtataattttag
agctcccccattgcggTGGAGAGCCACCATTTTTGGTGGagatgatactt
aggaatagtggctagcatattttgaagtttagaagtgcaacaaaTGACTG
CTATCtatcatagggctcaaaacgctaattagtcgattttcaaactaagt
ggttgtataattttagagctcccccattgcggtggagagcgaccattttt
ggtggaaatgatacttaggaatagtggctaacatattttgaagtttagaa
gtgcaacaaaTGTCTGCCCTCCTTTGTAGAGCAAAAAGtcgaatatcaaa
ctgaatttcgaatatcaaactgaatatcaaactgaatatcaaactaactt
atttttaatgatatttccatatacttATTGCTATTGTTTGATCACCATCT
GTCTTTATAGGCCATAGAAAATCATATAAGAGctaaaaacatatcaaaat
caatcatATTCCTTTTCTTACAAAGTCTCGTATTGCTTCACAACAGAGTC
TACTTATCACTAGCATttcgggctgaccttccagcgcagctggtttatta
gttcgataaaagatacaccatcttgATCTACcgcaaagattttttcaaaa
tattttttcttccctagaaataaaacttttataaaaaaatatttttttta
tcgccgaaaataaggtcaTCAAAGTTGAAAAACTCTTCTCGCAaatatca
ttttcttctttatcaaaatttagaattgcgatttttaaattttcagattc
agggaTAGTATGCCTAAAAGAATATGTATCACATGCCATTTGCGTTTTAT
ttccagtttataagaacattgaggctgaaattcgtcgaaaaattaagaac
aacataagaacatgcccagcctcagtttggaaaaaaatgacaaaaaacta
catttttttcctcttttcaagcagttttaacagaacttagggatggattt
tctataatcgagagtcaaatattgtccaaattttaccaattttaagtgta
attttgcatgatattgtcgataaaattaagaacgcatttaagaacatttt
aagctgaaaactgccaaaaaaataggcacatccaggctcagcctaatgtt
aggtgttctaataaaaaaacgtgtagttttgttggttacatcaggcagaa
atatatattttgtacatgCAAATATGagaaattcactatggtcaggaTCC
TTAATTTTCGGATAGCCATCGGATTTCCAATAAAAGGATACActcagtgg
cgtggtgggaagatttctctggggtggccaaggcaaatatggcgcccttt
ttaaagattttttgtgtgcgagcgaagcgagccagaaaattttgagtttt
tgaggtgatgaggggcgccattTTATTTTTTCATTTGTCAATCTTTCGAT
ATGGGCGCCTGAAAAATCCTTCTTGGCGCCCCTTATTTTAGGCGCCCCTT
CTCAAAAGGGCCCCGGTGGGGGGGGGCCTGGCCCCCTGcccccccccctg
ccaccacgccactggaTACACTTCaattgcttgaaatttttaacgaaaaT
CCTATTCACTTTGAATACTACATTTGAATGAGTAGAATATCAGTATaagc
tgctggcatccactaacggattatTCGTGCTCATTatatatactacctgg
ggtttgtAGTGGTCTGAAATTCATATAGAATCAGTAGTTTGAAAGGGGTG
GTCCTTGAGATCCAAAATTTAAAGTTGAAGATTGTATAATGAAAATATCT
ACGCCTCATTTCGATAAAATAAATTGATGTTGTGTCTCACAGatgatgaa
aatggcaaaaCTAAATAATGTCAAGGAAAGCTAATACATTAGCCTTGTGT
GGGCTTCATATTATCACAGCtggcgaaatttttaaattcaaagaAAGTAT
TGACATAAAATACGCTTTTAGTACAagacttatctggcacccgatgtaga
aattttcttccgacacgctaaagctctgaaggtcgggaaaattttcaaca
tctggaagaaatacattacggaatttcgcctgaNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggccgccaatacg
ccatcggaatatcagataagtacAAGACATGACATGTGTGATTCGTGAAG
ATTTTCGaggaaagatttttaaagtttgaaggaAAGATGTAGTGAAACAT
TTcgaaagtttttgaataaattaaagATTTCAAGAAATGCAATTTAAAAG
GCAATTTAAAAAAACAGAGGAATGATCTGGAGCTTGAATGGTATCTATTC
AATttgtttgaatttcaaatgttttcttcttatatatttcaacatttttg
tgtACATGGGAGATGGGGGTGCCTAAAGATCAATTTTATTAttacaaaaa
attgattgataGTAAAACTTGAAGTATTGCTTTATATTTTTAGTTGGTTG
CACATTAATGCTGATGATGTTGTTGGCTTTACCAATGTCTATGGTCGTTA
TTGGTAAGGATAATGCTACCATCCAACTTTCTTATAGCTGTTGAACGCAA
CCAATCAATCCAGACCCGCCATAACTCTATATTTTTACATGGCAATAAAC
GGACTTTAATTTATTTAACACGATGTCCATATTTACCACGATcggctacc
gtgaaaagcacagctcaaaatcatatatttatgCTGTGcagacgaatcga
gattctattcatcgcgcaatcagcgaagacaaaagtaaccatgacgacca
tccaagatcttggatgagcgtcatagtcgatatttttattcccgtcgttg
aaaacattatttgtcttcagaggttactattttctttgaaaacttaacct
ctgatactcagggtaacgATCGGCTACTACCTAAGATTTGAACAGAACAT
TCATTCCTTGTTTATTGCCGAGGACATGTCTGTTTCAGTTAGTTCATTAA
GtctcaaaaattggaaaatcacTGGAAAAAACATAATTTGTGCCTGGGAG
ATGCCTTGTAGACTATAGACTGTGATTGTTAAGGTTATGATATTGTATTA
ATGTGAATTCAAATATATGAAAAATCTATATACCATTGATATCTGAAATA
CCACGCCATACCAAAGATATCTCAATATAAATATAGCCAATCGCTGTCCG
TTTCAAAGGTTTCCCCACTCTTTAGAGGTCCCCCTTTAGAACATGTTAAT
CAAAATTGTAATAACTTTATTTCTATAGGAGTGTCATACAAAGATTTTTG
TCCGATCGAACCATTCATTCCGATCTATCTCATTGTCGGTGGATCGTTCG
GTATCATCAAAATGCTCTCCATCATAATTCAGCGAATCACATATAACGGA
GATATCTTTCAAAGTGATAAAAGCAACGAGGAGGAGCGTCCAATCGCATG
GTTGTTCGTTGACGGCGTATTAAACTTGTTTTTATTCACGTGGTTCGTGG
CGGGAAATATATGGGTGTATTCCAAATATAAACCAAATTACACGCCTCCG
CCTCATCAACCATTCAACTATTGTAATAAGACTGTGTACGTGTTTGCTTT
TTGGGTAATCACAACCAGTTACCTGATGTTGGGATTGATTTGTTTGTGCA
CGTGTTGCTTGGCCGCGTGCGCGAGCTGTACGGCGTTCTTTTTAACGAAA
GCATCGAATTCAGAGGCGGGTGCAGAAGATGAGGTGAATGGTGGTGATAG
GTTTATTGATAACCGGTTTCGATAAAGAATCTATGCTTCATGTTGTTTGG
TGTAATTTTGTCTGAATTCAATATTTCTGAGAAATATCACTATGTGATTT
ATTGTGATGTTCGAATCTTGCTATCTGAAAGAGAAAATTATTTACTGGTC
AATATGTAACTCATTGGGAAATATTGTTAGACCTTCATTTCTTTGTTGGC
AGGATAGAGATAATCAAATAAGGTTTTTTATTAATTGATTAATTTATGAC
GTAATAACCTTTCACGGGGTCAAAAGTTCTTAGATTCATACAACATTCAT
CAAACATTCATCAAAAACCACCTAAGGCCTAGATAACCCTCAGTGACCAG
GGTAAGTTTTGAAATTCACCGgctatgaaaaaagaaaaatcacatCGGGT
TGTCGGTGTCGACATCTTAAAAACTAGT

Coding sequence (CDS) from alignment at sc0000452:239682..257909+

>TCONS_00023363 ID=TCONS_00023363|Name=TCONS_00023363|organism=Clytia hemisphaerica|type=CDS|length=2601bp|location=Sequence derived from alignment at sc0000452:239682..257909+ (Clytia hemisphaerica)
ATGGAGAAGACCAACGCATTAGACACCAACAAAAGTAAATTAGAACCCAA
ATATTCCTTAAGTCCATTCTATACATTCCTCGAAAGTCCAGAAAAACGTC
AACAACAGCCTTTGACACTCGATATCTTCGCCCTCAGTAAGAAAACACAA
GAACTTCAACACCATCAAGATAGTATCTTTTATGATGAGGATAATAGTTC
TCTTGTCCAAACTTACGACTCCATTTTTGGACaatttaaagaagaaaaag
aaccaGAGAGCAATTCGTGGAATCACTTGAAAATGATTGGTTTGATATTC
TTGAGCAAAGTTGGTTGCACATTAATGCTGATGATGTTGTTGGCTTTACC
AATGTCTATGGTCGTTATTGGAGTGTCATACAAAGATTTTTGTCCGATCG
AACCATTCATTCCGATCTATCTCATTGTCGGTGGATCGTTCGGTATCATC
AAAATGCTCTCCATCATAATTCAGCGAATCACATATAACGGAGATATCTT
TCAAAGTGATAAAAGCAACGAGGAGGAGCGTCCAATCGCATGGTTGTTCG
TTGACGGCGTATTAAACTTGTTTTTATTCACGTGGTTCGTGGCGGGAAAT
ATATGGGTGTATTCCAAATATAAACCAAATTACACGCCTCCGCCTCATCA
ACCATTCAACTATTGTAATAAGACTGTGTACGTGTTTGCTTTTTGGGTAA
TCACAACCAGTTACCTGATGTTGGGATTGATTTGTTTGTGCACGTGTTGC
TTGGCCGCGTGCGCGAGCTGTACGGCGTTCTTTTTAACGAAAGCATCGAA
TTCAGAGGCGGGTGCAGAAGATGAGGTGAATGGTGGTGATAGGTTTATTG
ATAACCGGTTTCGATAAATGGAGAAGACCAACGCATTAGACACCAACAAA
AGTAAATTAGAACCCAAATATTCCTTAAGTCCATTCTATACATTCCTCGA
AAGTCCAGAAAAACGTCAACAACAGCCTTTGACACTCGATATCTTCGCCC
TCAGTAAGAAAACACAAGAACTTCAACACCATCAAGATAGTATCTTTTAT
GATGAGGATAATAGTTCTCTTGTCCAAACTTACGACTCCATTTTTGGACa
atttaaagaagaaaaagaaccaGAGAGCAATTCGTGGAATCACTTGAAAA
TGATTGGTTTGATATTCTTGAGCAAAGTTGGTTGCACATTAATGCTGATG
ATGTTGTTGGCTTTACCAATGTCTATGGTCGTTATTGGAGTGTCATACAA
AGATTTTTGTCCGATCGAACCATTCATTCCGATCTATCTCATTGTCGGTG
GATCGTTCGGTATCATCAAAATGCTCTCCATCATAATTCAGCGAATCACA
TATAACGGAGATATCTTTCAAAGTGATAAAAGCAACGAGGAGGAGCGTCC
AATCGCATGGTTGTTCGTTGACGGCGTATTAAACTTGTTTTTATTCACGT
GGTTCGTGGCGGGAAATATATGGGTGTATTCCAAATATAAACCAAATTAC
ACGCCTCCGCCTCATCAACCATTCAACTATTGTAATAAGACTGTGTACGT
GTTTGCTTTTTGGGTAATCACAACCAGTTACCTGATGTTGGGATTGATTT
GTTTGTGCACGTGTTGCTTGGCCGCGTGCGCGAGCTGTACGGCGTTCTTT
TTAACGAAAGCATCGAATTCAGAGGCGGGTGCAGAAGATGAGGTGAATGG
TGGTGATAGGTTTATTGATAACCGGTTTCGATAAATGGAGAAGACCAACG
CATTAGACACCAACAAAAGTAAATTAGAACCCAAATATTCCTTAAGTCCA
TTCTATACATTCCTCGAAAGTCCAGAAAAACGTCAACAACAGCCTTTGAC
ACTCGATATCTTCGCCCTCAGTAAGAAAACACAAGAACTTCAACACCATC
AAGATAGTATCTTTTATGATGAGGATAATAGTTCTCTTGTCCAAACTTAC
GACTCCATTTTTGGACaatttaaagaagaaaaagaaccaGAGAGCAATTC
GTGGAATCACTTGAAAATGATTGGTTTGATATTCTTGAGCAAAGTTGGTT
GCACATTAATGCTGATGATGTTGTTGGCTTTACCAATGTCTATGGTCGTT
ATTGGAGTGTCATACAAAGATTTTTGTCCGATCGAACCATTCATTCCGAT
CTATCTCATTGTCGGTGGATCGTTCGGTATCATCAAAATGCTCTCCATCA
TAATTCAGCGAATCACATATAACGGAGATATCTTTCAAAGTGATAAAAGC
AACGAGGAGGAGCGTCCAATCGCATGGTTGTTCGTTGACGGCGTATTAAA
CTTGTTTTTATTCACGTGGTTCGTGGCGGGAAATATATGGGTGTATTCCA
AATATAAACCAAATTACACGCCTCCGCCTCATCAACCATTCAACTATTGT
AATAAGACTGTGTACGTGTTTGCTTTTTGGGTAATCACAACCAGTTACCT
GATGTTGGGATTGATTTGTTTGTGCACGTGTTGCTTGGCCGCGTGCGCGA
GCTGTACGGCGTTCTTTTTAACGAAAGCATCGAATTCAGAGGCGGGTGCA
GAAGATGAGGTGAATGGTGGTGATAGGTTTATTGATAACCGGTTTCGATA
A
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013132XLOC_013132Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023363-proteinTCONS_00023363-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023363-exon-sc0000452-1491911889:239682..239766TCONS_00023363-exon-sc0000452-1491911889:239682..239766Clytia hemisphaericaexon
TCONS_00023363-exon-sc0000452-1510915933:239682..239766TCONS_00023363-exon-sc0000452-1510915933:239682..239766Clytia hemisphaericaexon
TCONS_00023363-exon-sc0000452-1575043694:239682..239766TCONS_00023363-exon-sc0000452-1575043694:239682..239766Clytia hemisphaericaexon
TCONS_00023363-exon-sc0000452-1491911889:240126..240439TCONS_00023363-exon-sc0000452-1491911889:240126..240439Clytia hemisphaericaexon
TCONS_00023363-exon-sc0000452-1510915933:240126..240439TCONS_00023363-exon-sc0000452-1510915933:240126..240439Clytia hemisphaericaexon
TCONS_00023363-exon-sc0000452-1575043694:240126..240439TCONS_00023363-exon-sc0000452-1575043694:240126..240439Clytia hemisphaericaexon
TCONS_00023363-exon-sc0000452-1491911889:256225..256284TCONS_00023363-exon-sc0000452-1491911889:256225..256284Clytia hemisphaericaexon
TCONS_00023363-exon-sc0000452-1510915933:256225..256284TCONS_00023363-exon-sc0000452-1510915933:256225..256284Clytia hemisphaericaexon
TCONS_00023363-exon-sc0000452-1575043694:256225..256284TCONS_00023363-exon-sc0000452-1575043694:256225..256284Clytia hemisphaericaexon
TCONS_00023363-exon-sc0000452-1491911889:257010..257909TCONS_00023363-exon-sc0000452-1491911889:257010..257909Clytia hemisphaericaexon
TCONS_00023363-exon-sc0000452-1510915933:257010..257909TCONS_00023363-exon-sc0000452-1510915933:257010..257909Clytia hemisphaericaexon
TCONS_00023363-exon-sc0000452-1575043694:257010..257909TCONS_00023363-exon-sc0000452-1575043694:257010..257909Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000452supercontigsc0000452:239682..257909 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0788394	0	0	0	0.0843502	0	2.71	3.37273	0.846214	0.414358	0.972283	1.82135	2.9024	1.54206	2.91925	6.24353	3.4523	3.01087	0	0.14118	2.50922	2.15742	2.76145	3.0355	1.24073	2.56432	0.584701	0	0.0924607	0.183976
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00023363 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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