|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00023379 ID=TCONS_00023379|Name=TCONS_00023379|organism=Clytia hemisphaerica|type=transcript|length=1237bp
aTGTAGATTTAAATTAGAAGAAGTGAAAAATTTTGGACCAATTTGTGAAG
TCGCTGAGCCTATTTTCCGGCTTTCAAGCAAAGGATCCTAACCCAAAACA
AGTCCCGAAAGAATGATCTAACTTAAGATAAACCATCAAAAAGTTTCTGA
AATGTCTATATAGAGGTGGTTTGTGGACATGATCGATTCTTCTACCTGAG
GATATTTAGATAAAAACCGTCAAAAAATGTCTATTTTACTAGATACAAGA
AAAACGTTGTTTCTAATCTCGTTCATCGTATATTTAACATTTGTAATTCG
TGGGAAAACATCCATAAGTCTTATAAAAGCAAACGCGATTCTATAACGCA
ATCAATACCCGGCTGTGTTCTATGATGAAATCATCAAAAGTACTATCTCA
AAGATTCTAGAAacgaaatctgaaaaaaaaagaccGAAAAAGAAGGAATA
AAACCAACACTCTTCTTTGTCCAGTATTGTGGAAATGCGACAGGTAAGTT
TGAGAAATCCTTGAGAGTATGAATGCACCAtataaacttgttaaaaaact
gaaaaagacgAAACATGTTCTTCCATCTGTGAAACAACAGGTTGAAAAAG
AGCTCAAAAGTATGGTAGTCTACAAAGTTGAGTGTCCTCGATGCCAATTG
AACTATGTTGGGCAGACTGCCCGGCATCTTATTACTTACCAGAATTAAAG
AGCACCAAAACGAGAAAATTCCCGTGGGCAgtcattttcaaagttgcaaT
TCAGAACTGTCAATGGATAATGTGTCGATAATTGATAGAACAATAAAGTC
AGAACAATGTCTAATGTCTCTTGAAGCTTTGTGGATAGACAAATTAAAAC
CACGTCTCAATACAAAAGACGAATATAAAAGCAGAACATTAacaattaaa
atttaatttcctAGTGATGCctctgacaaattcaatttttatgtGATTTG
TTTTTTAGTGATGTCTCATTTCTAGAGTATCGTTGTTGTATGTAGATGTg
atgaaaatattgttgctaaTCAAATggtttttactgtttttttacACTGT
ATATTTTTAGACCGGAAGATGAATATTAAATTATTCGAAATATATTGtcc
aaaataaataaagaatTGCTGGTCCAATATTACTGAATGTCAATTCTAGC
ACTTTTTGACGCAAAAAAACAAGAAACGTCATTCAATACAACTTGATTCC
CCCCTGACGAAATAACAGGCCAGAAGAGAGATAACAA Run BLAST on NCBI transcript from alignment at sc0000452:75675..76911 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00023379 ID=TCONS_00023379|Name=TCONS_00023379|organism=Clytia hemisphaerica|type=transcript|length=1237bp|location=Sequence derived from alignment at sc0000452:75675..76911 (Clytia hemisphaerica)
TTGTTATCTCTCTTCTGGCCTGTTATTTCGTCAGGGGGGAATCAAGTTGT
ATTGAATGACGTTTCTTGTTTTTTTGCGTCAAAAAGTGCTAGAATTGACA
TTCAGTAATATTGGACCAGCAattctttatttattttggaCAATATATTT
CGAATAATTTAATATTCATCTTCCGGTCTAAAAATATACAGTgtaaaaaa
acagtaaaaaccATTTGAttagcaacaatattttcatcACATCTACATAC
AACAACGATACTCTAGAAATGAGACATCACTAAAAAACAAATCacataaa
aattgaatttgtcagagGCATCACTaggaaattaaattttaattgtTAAT
GTTCTGCTTTTATATTCGTCTTTTGTATTGAGACGTGGTTTTAATTTGTC
TATCCACAAAGCTTCAAGAGACATTAGACATTGTTCTGACTTTATTGTTC
TATCAATTATCGACACATTATCCATTGACAGTTCTGAAttgcaactttga
aaatgacTGCCCACGGGAATTTTCTCGTTTTGGTGCTCTTTAATTCTGGT
AAGTAATAAGATGCCGGGCAGTCTGCCCAACATAGTTCAATTGGCATCGA
GGACACTCAACTTTGTAGACTACCATACTTTTGAGCTCTTTTTCAACCTG
TTGTTTCACAGATGGAAGAACATGTTTcgtctttttcagttttttaacaa
gtttataTGGTGCATTCATACTCTCAAGGATTTCTCAAACTTACCTGTCG
CATTTCCACAATACTGGACAAAGAAGAGTGTTGGTTTTATTCCTTCTTTT
TCggtctttttttttcagatttcgtTTCTAGAATCTTTGAGATAGTACTT
TTGATGATTTCATCATAGAACACAGCCGGGTATTGATTGCGTTATAGAAT
CGCGTTTGCTTTTATAAGACTTATGGATGTTTTCCCACGAATTACAAATG
TTAAATATACGATGAACGAGATTAGAAACAACGTTTTTCTTGTATCTAGT
AAAATAGACATTTTTTGACGGTTTTTATCTAAATATCCTCAGGTAGAAGA
ATCGATCATGTCCACAAACCACCTCTATATAGACATTTCAGAAACTTTTT
GATGGTTTATCTTAAGTTAGATCATTCTTTCGGGACTTGTTTTGGGTTAG
GATCCTTTGCTTGAAAGCCGGAAAATAGGCTCAGCGACTTCACAAATTGG
TCCAAAATTTTTCACTTCTTCTAATTTAAATCTACAt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00023379-exon-sc0000452-1491911889:75675..76911 | TCONS_00023379-exon-sc0000452-1491911889:75675..76911 | Clytia hemisphaerica | exon |
| TCONS_00023379-exon-sc0000452-1510915933:75675..76911 | TCONS_00023379-exon-sc0000452-1510915933:75675..76911 | Clytia hemisphaerica | exon |
| TCONS_00023379-exon-sc0000452-1575043694:75675..76911 | TCONS_00023379-exon-sc0000452-1575043694:75675..76911 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000452 | supercontig | sc0000452:75675..76911 . |
Blast
The following BLAST results are available for this feature:
|
