TCONS_00023396 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023396
Unique NameTCONS_00023396
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1993

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023396 ID=TCONS_00023396|Name=TCONS_00023396|organism=Clytia hemisphaerica|type=transcript|length=1993bp
ATTTATTCTCATCCAGCGTCGATCATTCACGGTTTTGACTTTGATGGATA
CTGCTAGCACGacATTAGCTCCAGCAGCAGCCAGTGATGATGGGTTCCCA
CCGGCTGCAATTGCGGTGATTGCTGTTGGTGGTTACATGGTTATATTTAC
ACTTGGACTAATCATCAGGAAATGTATTATTAGCAAACATGGGAGCTGTT
GTCCAGATTGGGTAACAGAGCAATGCAAATGTCAGTGTTCTTCAAACGAT
GCAGAAGAAGGATGCATAACACGTTGTGCTACAGCGTCTAACTGTTTCAA
ATATCCTAGCAAACAACAATTCTTAGACTCGTGTTGTCCAACAAAACAaT
GGTGTGATGACACTTTTTGTTGCTGTATGTCTGAGCAACCGAGTGGCCAG
TGTTGTAAATGGGACGATTGTTGCAGTGATATGAATTGTGGAAGCTGTTT
TGATTGCCCTGACTGTAAAGACTGTTGCGATGACTGCAAATGTGAATGCT
GTTCTCAACCTGAGACGATTGATTGTTGCTGTATAGAGGTAAAGTTAGCG
GGCAACCGTGGCCCTGGTGGTCCACCCCAGCAAGGTGGTTATCCTATGCA
TGGTTATGGTGGTCAAATGTCTGGATATGGGGGTCCAATGCCTGGGGGAT
ATGGCCAGATGCCAGGAGCAGGATATCCTGGAGGAGCCTATAGTGGTGGG
GGTTATAACCAAGGTATGCCTATACAGCATCAGCCATCTATGATGCAGCA
CCCTCCAGGCATGTTTCAACCGGGACCTTCAGGTCCAGGCTCTCTTGCTT
TTAGTCAACAAGGTGGCATGGGTGGTGGTGGATATTCTGCCTCTCAGATG
ATGCAACCTGGTGCCTTTTCACAGAATATGAGCAGACAGGGTTCTATGAT
GAATTCCAGTATGAATAATATGGGTATGGGAAGGTCTACCGCTAGTATGT
TTCAAGGTGCCGGAGGAAGCAATCCTCAAAATTCCACTAATGCCTAAATT
GTGAAGTTGAAAATGATCACCtattatgaaatttttattgagtTGCATTT
ggaataagattttttatacaatttttaATTGACTTTTAAAGTTGTCATGG
ACAATTTATTTATTACTcatcataattttttaattgaatccacacctatt
ttttattttttcaccctAACCTATTATTTTCCCCCTATCTTCAGCATACC
AATAAGAAGTTAGCTACTCTGTAGCCCAAAACAACGAAACaaccaatttt
tgtttttaactagTATAACAGATTGCTTGAACTTGACTttgagaccatgt
tcagaccATGTTTTGTATCGATCCGAAACGAACCAGTTCCGAAACACTGT
GTTaataacgtcaaaattcgaaacgtcaaaaaagaagccGCTACAAACtg
aaacagatcgaaacggatTCGTTCCATTTTTTCATCGTTTCAGTTTCGTT
GTTCCAAAATCAGTATGAACACTTCCTATCCGTAACAAATAAATATCATA
TCGAAGCAAATCGATATTGAAACGTctaaatatgttcttaattaTCTTTT
CTACGCTCTATCATCTTATTCATGTTTTTTTGTTCTAGTGCTCATGGAGA
GGGACGTTAGAGAGAACTTTATCAAATATCAGAAATCTACAACCATTAGG
AAGCGGAAGTATCGATAGTTTTGATTTCACTTGGAGAGACAGACTAAGGA
GATCCACAATGCATTGGGGTAGAAAGTTAAGAGGACAGACACGTGAAGAA
CCAAATGAGTTTGTGAGGGAGAAAGCAATAAGGCATACAGTTGCTACAGG
AAGAACAGGCAGAGAGAAAGAGAGGAAAGTTCTGGagccaaagaaaaaat
atttagataATGAGACTATATTGAAGGAAGCAATGTTTTCTGGTGGTTTT
GAAGATATTGAAAGTTGTTATTCTTCAGATGAGTGAACTTCTAGAACACT
TTATGTATGAGAATAACCAAACTGGCACTCCTGTGTATTTGAA
Run BLAST on NCBI

transcript from alignment at sc0000453:148396..169594+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023396 ID=TCONS_00023396|Name=TCONS_00023396|organism=Clytia hemisphaerica|type=transcript|length=21199bp|location=Sequence derived from alignment at sc0000453:148396..169594+ (Clytia hemisphaerica)
ATTTATTCTCATCCAGCGTCGATCATTCACGGTTTTGACTTTGATGGATA
CTGCTAGCACGGTGAGTATATATTTGAGCATCTTTTTATATATATGATTT
ATAATTACTATCCCCAGACGGTGTCATtcaaacgaatcgaacgccgaatc
aatcgaacgcaattgaacgcaatcgaatcgcaatcgaatattacccagga
tttactGTTCGATTGCTTTTCAATTACGTTTGATCagttaccgtgaaaaa
gggtaacttgcatcattggaggctaacatgcatagccctcaaatgaaaga
cccagCTGGTCattataatacaaaaataaatcaaaacaaaaatggtagag
tagagctgcgagcggagctgcatagttgtattttaatgactagccaggtc
attcatttgagggctatgcatgttagcctccactgatgcaagttaccctt
tttcacggtacaTCACACTACTAGAACGAAAAGCATTCGTCGTGGACACA
CGAACGGTCAGTCATTCGTCACGAACGGTCTATCCGTTCGTCACGAATGC
TTTCGAGCGACTTTCTtttaaagcgttcgtcacaAACGCTTTCTAGATTT
CGACTCATTCGTGACGAATGCTTTAACAGGGAGGCGTTTGTCACGAATGC
TTTATGATTTATGACGAATGCCTAAGCGTTCACGACGAACGCTTTGCTTT
TAAGCGAATGTCTAAGCGTTCATGACGAATGCTTGTGCATTTTTCACGAA
CGCTTTTCAAATAGGGTCAAATCCAAACCGTTCGTGACGAATGGTTTGGT
TCAAAGGCGTTCGTGGCGAATGACAAAAAGAGGTAGACTATGTTTAAAGT
GTTCGTCACAGTTGCTTTGTTGTTTATTACAAATTATATAATCAGGAGCT
CCAGCACAAAGTCAATTGCCTGGAAGCGAAATAAATAATTCATAATTTGT
TTTATCACACGAGTCTTTCACTAGTTAGATCTCGATAAAGCGAACAggga
atataattttgtttgaattaaaCATCCCTTTATCACagaaacaaagaaac
aaaaatttacttgaATTTCAAACTACCatcatccactaaatatttgaaac
aaaggagagttcccggtgtaattttgaacacctcaattgatttttaagcg
cctcaAACGACAATTGGAAAGTAAAGTTTTAACACGAGACTTaggactta
ggaccttaggatctcaggatttaaaagctcaaatttgctcgaaagaggct
tggaatatagcctagaagccaacaaacccctctaaaatcgaaacattcaa
tggaagaaagtggaagtgctaaaatagcaattctcgcccgaactttgaat
tctgaaaaacgttaaaatacactaaaatctcaatatatttcgagggtGAC
TGTAGCGGCAATAGAATTTCAAACCTCACTTGTCTAAAGCAGGAAGTTCT
CTTTTGGACTCATCGCGTCCAGCACCTCAATTTATCCCTACTGATAGTCA
ATTTTCGACTTGTCACTGAAACAGGAGTGTGCTGTATGTAATTCGTAATT
TAAAGGgagttttgaattgaaaagggTTAAAGTATCTAGCGGTGAATCAA
ATCCCAACCATTCTTTGCATAAGTCTGAATTATAATacactcaaaaaata
taatcttaattcttattacttggacaaatgtttcttgatttttgttaCTG
TATGATGGCAATTCGTTACGAAAAAAAATGCCCTCGGAAGTTAGGAGTGA
TTAGGGCTTCTGTTTTTTTACCTacattacacccccttctcaccgaCCCT
CTGAGACCCCTTCAAGCCGGAAAAATTGGCCGAAATATcgttcccagtgg
aaaattagactctaatttttgtctctgttgaaaataatcaaataaaaaaa
tccttgCTTAAActtttgtgctatttttctctatccccactgaattttct
gacaaatatatattttctgggAATGTTAAAAATGTCTGTAAGggcaaaat
attcattcaaaatcATCATCATTCATTCAAAAGTCGTAACAACACGCAAT
GAAAACAAGGAACATTGGCTCTATATAGACTTCTACTTTCTGAAATATGT
ACATGTTAGTATCATCCCATCAAGTTtttgtccgttatttttacccccct
CCCACCCCGGGCTGAAAAATTCTACcagatctgtgagaaggggtgttacA
TTTGCTTGATTCCAGATTCTTTTTAGGTGTGATCAAAGTTTCAGCCTGAT
TTGTAATTGGATGAAAATTTGCGTGacttattttatgttttttatattta
aaaaatattacaatgAACAAATTTAGGCAATTTTCTTGATCGTAACGAGA
ACATGGTATGATGTATATGGAGGGATAAGAGATGGCTGCCGATCGGGGAC
TAATTTATTTAATCTCTTTTTTCAGTATGATATTACaatatttagattta
aaaaatttgagacaGTGCTTGTAAGTACAAATTactggtttgagaaaaaa
aaaacattggtgGTTAGAAGTTTTATATCATGTAAAGTTATCAAGGTAAA
GTACTAACATTGTAGGATTCATTATCTCCCAGTTTNNNNNNNNNNNNNNN
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NNNNNNNAGTCAAACGTTCTCGTTTGAAGATAGAGTAAAGAGtataaaga
gaatttttttaaagacaatcCGAAGATACGTTTCAGCAAGATGAGATACG
AGCACTGTAAAAAATTTGTCTCGCAAATGAACTTAATACAGACTTGAGCA
GTATTTCGGCTGTTATTTTCTTAGTATGATTGAACCCCCGGTGGGGGGGA
GGTACTTCGGCAAAAATATGGGCGCGTGCCTTAAGGGCTGGGtcaccctc
ccaaagtctctAAGGTTTACCAAGATCACGGCTTTGGGGGATCTCTTTTT
TGTGACACTGTAATGTCTTCTTTTGAGAGTAGAAAATGTTGCAAGAGCTT
GTCAATCAattaatttcgcaaattttcaaggaagaaagaaaagaaacctA
ATAAGTTTACCTGATTTAGTTAAGTTNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAG
AAggagattttttggcctttgaTTTTAATGGTCGAGCAacttcgaaactt
ataaaattagttttgttgatatttttaccTAGCTGTTTCCTTTTACCCCT
CTGATTAATAAATATGTATTTTAAACGTTCTCTTTAATAAAGCCCTCTTT
ATTCCAGTTTATATTTGGGCTGAAACTTTGAAGAAACTAGTGTAAGTCGG
GTGTGAGTTAAGTTAACTATACAtaaaaggctttaaaaaaaaacagaaaa
aagaaagtttaaaaaaatttgcaagCGATACATACATCTCTTGATTGACT
CCCTCCCTCACGTATGCTTTTTGAAGAACCCTTTTTGTTACGTATCGAAG
TAATTAATTAGGAGATTCCAACCTGTTCTTACTTCTACCGACAAAGCTTT
CCgcgatatttttatccccaaccAAAACTTGCATTTCATTCCATTGTTAA
CCTCCCACGTCCTTTTTGCACTCTTACAGTatataatttcatcaaaatgg
gGTGAAATGAGTGGTTCTCCCTCTGGGTAGAAACACTTATTTCCAAAACc
actaaagtaaaattttttgaattttctaagGGGAGCCAATTTTTCCCGTC
GAAGCTTTGGCCTAGGCTTCTATTATTCTCAAACGAAAAAAGCTTCTTAC
AGGAAGTAAATCTATAGGGTCTGTGAATCAGCTATTGTTTTACCTCCAGT
AAGGGACTTGCGAAAAGGTACTATGtagaatttttcttatttaataCTAA
CTGTGATTTATTTGCAAACTTTCTGTTTTATAAgcttttttgattgtttt
aagaCAACCAaatactactttaggcgtacagacTCGCAGACTTTCACggg
tagaaactttcgcgattttcacgAATTCtattttagcccttttcgccgag
gtaaatgtctttgaaaattcttgacaaaataaaaaaatctgtaaaacgtc
taacttaaaataaaatgtaagatttatggcactttttagtcTCTCTGTTA
AAGTCTCATAAGTCAAAAGACATAAGTTTCAATCCAGTTCTAGAAGTATA
CgctcgcgaaagtaaatgttgtaaATTTCGTGATTCTTCGATCTCGCGAA
ACTTTGCACGCCTCAACAAGTACGCAAGTACTCAATTTCAATCCTTCATT
TTCGACAATAAAACTGGAAATCAGAGAAAGATAGTGAAGCACGTTTCTAA
GAGCGTGGGAAATTTATATCACGTAATAAACAttggaatgtcttcttttt
cttttaaatgttgcaaaaaagGANNNNNNNNNNNNNNNNNNNNNNNNNNN
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TCCTTGTGCATGCTTTAATAAATAGCTCTAAAATGAATTTGGTCTtcgtt
tgaaatttgaaatacatTTGTGCTTAAAGTCAGTAATAAGATTAttgtcg
tcaaaaattgaaatggCACAGTATTTGATGTCTCACGTCTTGGTTTGGCT
AAGTCGTTACTTTGTATGACATTTTTGCATAAAGTTTCCACatgataatt
attttcattactgGATTTTAAATTCAATGACATTTTCGAATTTACTTCGT
AAACATAACGAACACTTTAATAACATAGTCTACCTTTTTCTGACATTCTT
CACGAACAGATTTTATCTTATTTGCGTGACCCTATTCGAAAAGCGTTCgt
gaaaaatgcacaaattCGTCATAACGCTTAGACATTCGTTTTAAGAGGCA
AAGCGTTCGTCATGAACGCTTAAACTTTCGTTTAAAAGCAAAGCGTTCGT
CGTGAACGCTTAGGTATTCGTTATAAATCATAAAGCATTCGTGACAAACG
CCTCCCTGttaaagcgttcgtcacgaATGAGTCGAAATCTAGAAAGCGTT
tgtgacgaacgctttaaaAGAAAGTCGCTCGAAAGCATTCGTGACGAACG
GATAGACCGTTCGTGACGAATGACTGACCATTCGTGTGTCCACGACGAAT
GCTTTTCGTTCCAGTAgtgtcaatagaccttttttcaaagaggacgtcct
gttgaataattatgtagtccagccataaaaacaatgatagaaccatgcat
aattactgtatcatgcatattgtatggttttatcattgtttttctgctgg
actacataattattcaacagggtggattctttgaaaaaaggtctatatgc
cttcttacctgtctttaaaaatatggGGGAATTGTGCTGATCACCTATTG
GACGATATAGAAAAGATCCACATTAAAGCTGCTCGTTTCATCGAACGAAT
CAAGAAGAAAGTAAAAGATTGTGAAGTTCTCGCTCAAGCAAAGTGGAAGC
CTCTTGCTTTCTACTATAAGAAACATCTTACATGCAAAGCTTATAAAATC
TACAACGACTTGACTTCACCGTTATTGAAAGACTTCATCAACAAATCAAC
CAAAACAAAACGCACACGAAACGAATGCAAAATTGACCAACCAGCTTTCA
ACTATGTCGGATACAAACGCTCTTTTGCCTACAGAGCTTCAATATCGTGG
AACCCCTATGTGTTagagagaaaaaatctttagccACTTTCAAAAAGGCA
TtacttgaatcaaaagttataccCAAAATTAACTTTGGCTACAATTCGAC
ATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNATTTTCGATATCTACATGCCAATCAAAAGAAT
GCAACAAAAAAAGGATTTCACCTAAGTTTAGTGATACTTAAATATCACCT
GTTACAACCCTTATAATATGTGATATCTCTCCAGTGCaagttagttttga
tttttttttaccacaaatttaccattttcataCACTCTAACAGCTCCATG
AGcccctatatctttattattagGCCTTAAAAGGTGGTGTCAAGGTACAT
TTCCATGAAATATAGGCTATAGACTGTCATAGAAAAGTAGAGTTATGCTT
AAATAatgaactttatttttcatgatttcggacgggacacggTACAGATT
TAGCGCAAATTGCccttatattttattgttcgcttctttttaaagattcg
ccgggttggaaaagtatgaatttctttgtacatattttacctaccccaaa
tatttaggaggctgagttttaaacgaNNNNNNNNNNNNNNNNNNNNNNNN
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Nttgaaagtttgtctcggcctttttataatgagcgagacatatgttctct
gattacgcaattttcatattgacattttcgaggcattttgatgtaactgt
cgattgtattcgattacgttcgcttgattcaatacaccgtttaacagtgt
cgactgcgcatgtgtaagaacaattttccattgttttgattttggcaatc
atgggaaacttcactctcccccgtaaaaaatggtaggtaaacatccagtt
ctcataagaaaacccagcagagaaatggtaggtaaagaactccttttaat
cATAACTTCTTTTCCTCTAGATGAATTTTggtgaaattttcaggagagat
gtACATAAgattgtcattaatatcatgttcaaatatctaaaacattctct
ttaaagaaaagaaaaaaatggcaatgtttacatttctctaaccttccaca
gtactaaattgagcatttttacctactgcctctacggtggagatggcgag
actgttaaacggtgtattgtgTATTAGtttttattcgctttggtatggta
cttatcttaagcactcggccgcccacgcctaaaagctctaacagagtgat
ccaatttgatttaatcgcaatcaaactcagcgaacataatcgtaatcgaa
cattaatccaatgtaattgacaatcaatcgaaccagtcgaacatagtcaa
ctatcaatcgaacattactcaaacgcaatcgaacacaatcgaatattacc
caggaatcggccgttcgattaagattcgattacattcgacaatcgaatcg
caattattcgatcgcgttcgattacgttcgattggttgattgcgattttt
gttcaaagttgttcgattgacaccgtctggctatCCTCAGTGGCAACAAa
gactagtgtatatgtataagaattacgaagcgatccaggcaagtcactcg
caTGCATCAATTCAGTGTGAATCGATTCAGGAAATTACATAGCTATGTAA
TCATTTGGAATCTCTCTACTCGCTAAGCCTTATATACCTAAGATGTTTTT
ATATTTGTTATTAGTAAATAAATCTTGtttttatatgcaatttttaattt
taagtttatttGTTATTTAGTTtatacatatattttttatcactatttat
ttaccttatatttatattcttttcTAGATAATATTTGTGAGAATAGGTTT
TGTAATTAACCTCATGTAAATTATcgaataaaaatagaaatagaaacata
GAATCGCAGCGTTGCAAAATTCTGAAACTTAAGCCTTGTCAAATTCCACA
ACATTATCAAATTTTGAAGCTAGCTAAATTTGACACAATGATTCAATGCT
TGCCTTTCCCAAGAACGGGCACCACACCACAGGACAGGGTGCTGCTGTGC
TGCCTGCAGGATGATAAATGGAGTCTCAAAATCAATAATATAGTTTACTC
CAggctttttctattttctatttctattcaataattcAGAGGGTACATAT
GTACAATTTcctgaatgtaaaataaaatggtaataaaataaaatctatct
aaatataataaaatctagaatttaaaaaaaaggcaACCACTTTGGAATAA
GAGGTAATTGAATATTGCAGAAAAAAGAACTTAAGATTACTGAGGAATTT
AATTGGTTACCAAAAAGAGCTACATGGCTGTATTGACATTGAAAACAAAC
TAAAAGGCTAAAAATGTGAACGATAAAAATATGTGANNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NCGATAAAAATATGTGAAGGATAAAAACAATTCTgagtaaaaacatttta
ttaactaatatataaaacataagataaattgaaataaattagaTTGCAAG
GTTGAATCGAGGAGAAAAACTACAGAAGAAGTTATGACCTCACGCATCac
tgaaagaattttgaaaacttgataAGACAAGACAAGATTACTGGTTGAAT
CTCAGTCCcagatttcaaaaattgcacTTTGGGAACATGCTAGATATATT
GCTTTTGAGTAGATTGTGTAGTTTATAGACCagtttgtaaaataaaatat
tatacCGCTAGATAAATAGCTCTAtcgccaggcccaattgatagttTGGC
TGGTTTGTGTCCTCCGACCAACTTTAATAATTGAGAAAAAGTGACAATGT
CCCAGTGTAATCCATACTTAAACAGTATAAAAAACTTGTATATCTAGCAG
ATTACTGGATTACGAGTACGGGTAGcagattttacttttgtttagagtgg
tttcattttcgatttcaagccaacatcttagcaatggGGTATATACAggg
atttttgcaaaaaactaagcatagaaaattttccaaatcccccatttcga
ttaatgcaatTAAAAAtgtatgtttcacttttttgcacccattcttcaaa
atgaaaatatttaagatttttaaagttcttcttcTATTCAATGACTTTTT
ACGGGGcttaactctcgcatcaaattcccgctttcttcagtaaattgaag
atgagaaaaaacctaagctaCAGATCATGGATTGAAACAAAtgtatgaag
ggtgggattttacagccgtcCGTCGTGCAAGAGTCACTGACTGAAAGGCC
ACAGGTGCCGAAAAGAAGGGCCGTGTGAAATGCAGTAatttcattggtgg
aaatttgctAAACAACTGCGAAAGGTgccgggaagcaatcagtagaagaa
accactttcgtttttgttgcagatttcgatataaaccTCTCTCACAGGGA
TAACTTGTTCTtgtgtgttgtgtcaacttgtcagtaTTTTATTGTTCTAA
AGGGAAAggtaaaagaggtaagactagtctagtttctaatcctgatagaG
GAGTTTAAGattactctcaggtacctaatagctgggggggttggaataag
cagtgGGGTTtgcaaaaatctcaaaatttaataagcgggggggggggggg
gggaaaagggaatgggttttaaaaaaaaaaaaaaaattaagggggggggg
ggggggggttggaataaaaatgtcctgggtggaaaatgtttgaaaaggag
gctaatacagcagaattaagacaaaaaagggaactttccaaaacattttc
ccaaaaattaataagcagggggttggaataagaatgttctggatggaaaa
ttttcgaaaaattaattagcgggggggcggctattaggtacccgagagta
gactgttaaaaacaaatatttaagCACCCAAAAGCAGAGATTCAAGGCTG
TATTCCTTAAGCCAGAGACATATGCCAACTGTCACTCAAAATTACCCTGA
TTTTACAactttcggaaaaattttccccagttttttaagaaaaattgggC
TAAGATTTCGGATTCCAAGTTTTAGTATTCCGTAGAATTTAgagctttta
attcaatttaaaCATCAGAATCAGAAAGAGCAAtgaattttgacatggat
tTGTGTATAAAACACAAAATTTGGTCATCTAGTTCCGTTATTAAAGGATT
TTTAGGTTTACCTGGAAAGGCttataatgacgtcatcacaaaactttcaa
tctccacttttgataggaagattttcaaggcatgttttatacctcaattt
tcatcaaataattcaattccagccaaaaatgccggaaatatgccggaaaa
actgttttttcggcattttctcaagatttcatcgttagttttttctgatt
ttttgctcaaagatgtgtattaacaatgcccaaaacatggcccagtctga
ttcttgagaaaaaaatttttccggccaaaaatgacggaaatcgccgtttt
tctggattttcattggactttttccatataattggttgttttttcattca
aaaacattattaatagcaatgcccaccatcaagcatNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttt
cattcaaaaacattattaatagcaatgcccaccatcaagcatgtttcaat
tttcaataaaattgatttttgaagccggaactttctaaaaatccccggaa
cagccgattttcgccagaAAAACGGTATTGCTTGAATTTCTTGAgttgta
ctttatattttttcatgaaattttgcacactgatgcaatatgacaatacc
taaaatgttacagagcccgattttcggaaaaaatttttccggccaaaaat
gccggaaatgtgttggaaaaatcggttttttgacattttctcgagttttc
atttttagttttttctgattttttgcagaaagatgcgtattcgcaatgct
caaaacatggccgagttcgattcttgagaacattttttttcggaaatcgc
cgttttgcagattttcattggattttctccttatatttctgtttttcaca
caaaaacattgttgataacaatgctcaccatcaaacatgattcaattgtc
aataaaattgatttttgcaaccagaacttgctatttattttttccctaca
acccttccctctccccccatcaacaatcaatgatgaatttattgggtttt
ttttttcatttctcttttcgcattgctatctaactttcatcatcaggtag
gtccattcagcatgttgcttgttaaatgttaatgactgaaacgaaattac
aaaaatactgatgcatcatgCAATTATACTTCCGTtcaatttgataggtc
gatttttaacgtgtttgagcactttcagaaagtaacgtttttattcaatt
gagcataactttcgatgTAATGAACCGATTTTAATAGataacccatcaaa
atttaagtttatcttttttctttccaatggaataggaatggttcttttaa
aatctttagattttgagaaaattagttttaaagggtgaaacttttttgtg
gcgcacccggtatatgaTAATAATTGGTTATCAAAGTTATCaaaagggtt
gttaagaaagtgatcaaatactcacaatttttttgaaattttgatactcG
AAATTCAATTGTTAATCGATAAGTGGTCTTTCAattacttcgatcattat
cgattacttcgataatcgaatttatTGATTAGTACCATCTGGTAGATATA
AAGTTTAGAATGTTGAGCAGAACCATAAACACAGtgcatttcacaaaaat
acaaaCACTAAAAACTACCCAAAAGcctgaaaaaaatataatgtaATCTG
GAGTCCCCAGGTGCAGTAGCTTTAAACATGTTTCCATATTCTATAACCCT
GAACCGACCTTCCAGTTCCAGTCCAAGCAAACTAACAAACATAAATAAAC
ACAGAAACTTGCACACAATTGCAAAGAGACAATCCTCTCCTCATATAAAG
TCAACACCATAAAAAGGATAAACAATCAGACAAAACAAACAGTTTCAAAG
AGACAAGTAACAAGACAAAGGACAAATCCAGAACCCAGTTCCAAACTCAA
AGTCCGAAGTGCCGTGCAGACTGCCGCAcaggaaagaacgaaaaagaaaa
tgaatgagAAAACCATTCAAGCTAAAAAACCATTCAAAGATTTTCCGGTT
gatgtaaaacacaggtcacaggtcacaggtcacaggtcatacaaattaca
gaccggaaaactgtaacgcactcgtaacatacaactcataacataagttc
ctgaaaatattatatgtaatggaaatataacatcaaaatatgttatttag
aagacttaaaaCGACAAATTatcaaccccaaatattgacaacaaaatgac
acttaaattatgtaaataatgacgttatctcaaagtatgaggttttgtcC
ACCAAttaacctcaaaatatttttcatgcataataggatgctgacgctgc
aagtggatattatattgacaggttttgaaaacattaaatactccaagaga
gctgttttagagatatggaaatagtgacgtcattttatcaaaaatacaaa
gcagtggataaaaatattgaaacattcataaaatataatcccattgatgc
tatttttatcaattcttgttatcatacccaaggtgatgcatgagataaaa
tgagatatgacatactgattgtgaaatagctattttcctgttagggggCC
GTTTAAAGCAAAAGGTGagattaatattttttaatacgtattattctttg
tatataacatacgtaacatgcatataacattgaaaagataatttttatta
catgtgtgatataggtgtaatatataataataataataataataataata
ataataacaaatgTTTTAAGTGGCTGGCTCCGAAAAATTCTAGAGCTTTT
AGACAGCTcaagaattgtttccacgaagggccactACGAACAGAACAAGA
TCTTTAATACAAGTATTaaaggtccgtgttatacacggcataaaacgcga
AATCACATGGTAAGCACgtgggtagatttttagctttaaaatagttctag
atcaataaaatacctttggaattatatttttgacattaacaactgttttt
caaacattttcaaatatcgctggaacaacctattttcgccgggaagacag
tatttcttgaatttctcgagctgttacacactgatgcaaaatgacaatac
ctaaaatgtgacagagcccgattttcgaaaaacattttttttccggctga
aaatgccgaaaatatgccggaaaaaccttttttttttgacattttctcga
attttcacccttagttttttctgattttttgcagaaagatgcgtattcgt
aatactcaaaacatgaccgagtttgattttttaagaaaaattcttttccg
actgaaaatgtcggaaatatgccggtaatcactgtttttgcagattttta
tttgactttttccttatttctatgtttttcacactaaaacattattgata
acaatgtcCACCATTaaacatgattcaattgtcaataaaactgatttttg
caaccggaactttctatttctatttgctCTCCCCCATCAAGAATCAATGC
TAAAATTTAATGTGTTATGCATTATCGCAAAATGCTATATCGTCtaactg
attgttttcatttttctccttattgctatctagctttcatcatcaggtag
gtccattcagcatttccactcaaaatttaataagcgggtgGTTGGAATAA
AAAAGTCCTGgttggaaaatgttcgaaaaggaggctaatacagcagaatt
agggcaaaaattttttcaaaaaatcaataagcaagtgggttggaataaga
atgtccttaGTGGACAATTCTCGAAAACTAATTAGCTTCCCCCgcctatt
aggtacccgagagtaatcaagttttagaaaaacaataacaaatttAATGT
GGTTGCGAATTGCCCCTTTAagtgccctgtcaatattttcgTTAAATAGT
GTTGATTTTAGTTTAGAATTTCTATTTCTACACTGAGTGAAATATCATGA
TTCTTTTTTGGATATGCCAACCAAAGTTTCTAGTAAGAAAgtttttaatt
acaaaattcattttttcagacATTAGCTCCAGCAGCAGCCAGTGATGATG
GGTTCCCACCGGCTGCAATTGCGGTGATTGCTGTTGGTGGTTACATGGTT
ATATTTACACTTGGACTAATCATCAGGAAATGTATTATTGTAAGATGCAA
TCTATGTGGGCTATTGACTTCATTCAGTGTATCTGAAACTTGAGGcttcc
ttttttttgcatttttttagagtttttaaaTGAGAATTATAAGTCAAATT
CTCTGATCTCAATTTCCATGCAGACAATTTTAAGCTGGTAATGCTAGCAG
ATAAAGCAACGCTTTATGTATATGTTACAAAagttttaaaacatcaaaac
ataaaGAGTGGAGGGAGtataaaacatgtttttttttatccaaaaacAAA
ATTCACACATATCAATAAAATGTTTCCTTTTTACTTAAACTTTACAAGTA
AATATTGGCTGAACTTTCAAATGACTCGGCTTGAAATTTTCCTCCAGGGT
GAAAAGATTTGTTATAACGTTATTTTGTAGAGCAAACATGGGAGCTGTTG
TCCAGATTGGGTAACAGAGCAATGCAAATGTCAGTGTTCTTCAAACGATG
CAGAAGAAGGATGCATAACACGTTGTGCTACAGCGTCTAACTGTTTCAAA
TATCCTAGCAAACAACAATTCTTAGACTCGTGTTGTCCAACAAAACAagt
attttatcatattttgtaattttttttggtttggttcaactttttaaaaa
tttgtatcGAGAACACGTAAGCAATACCTGATTATTCTTGTGCGACAGAG
TGCTACGTGTAAATTAATTAGAAAAGAGAAAGATTCCATCCTTTTCAAAT
ACCCAATCAATAATTTTAGGAAATAAATTTACTCTCTCTTTTATACAACT
TTGAAGCTAGCTAGGTTATAAACTTGGAGACAACTAGCTTGATAAAAGTT
ATTACTGCTTTGACGAAAATCAATAGTATAATACATTAAAGAAATActga
actaatttttgcggttggCACCTACTTTTTGCCAGAATTCTTTCATATAG
GGGTTTTTGAGGTTTTTTAGTAAAAGTTACATTTCGCGGAACTTATTTTC
GCAGTAGGCacccaaaaacacaaaaattagttccctgaCATAATTGAATA
GTATAAATCTTTTGCTCATTTTTAGTGGTGTGATGACACTTTTTGTTGCT
GTATGTCTGAGCAACCGAGTGGCCAGTGTTGTAAATGGGACGATTGTTGC
AGTGATGTAAGTTTCTCTCCTTTAAAACCAAAAGCGCTATAtatcaaaat
tgatttaaattgaTCAAAAAAGTCCCAACCCTTTTAACATAACCTTTTAC
TGAATATTTTTAGTCATCTTTTTCTACACTATTCTAAAAATATAGTATAG
TTGATTTCAACCTGACCATATTACATACTATTTTAGATGAATTGTGGAAG
CTGTTTTGATTGCCCTGACTGTAAAGACTGTTGCGATGACTGCAAATGTG
AATGCTGTTCTCAACCTGAGACGATTGATTGTTGCTGTATAGAGGTAAAG
TTAGCGGGCAACCGTGGCCCTGGTGGTCCACCCCAGCAAGGTGGTTATCC
TATGCATGGTTATGGTGGTCAAATGTCTGGATATGGGGGTCCAATGCCTG
GGGGATATGGCCAGATGCCAGGAGCAGGATATCCTGGAGGAGCCTATAGT
GGTGGGGGTTATAACCAAGGTATGCCTATACAGCATCAGCCATCTATGAT
GCAGCACCCTCCAGGCATGTTTCAACCGGGACCTTCAGGTCCAGGCTCTC
TTGCTTTTAGTCAACAAGGTGGCATGGGTGGTGGTGGATATTCTGCCTCT
CAGATGATGCAACCTGGTGCCTTTTCACAGAATATGAGCAGACAGGGTTC
TATGATGAATTCCAGTATGAATAATATGGGTATGGGAAGGTCTACCGCTA
GTATGTTTCAAGGTGCCGGAGGAAGCAATCCTCAAAATTCCACTAATGCC
TAAATTGTGAAGTTGAAAATGATCACCtattatgaaatttttattgagtT
GCATTTggaataagattttttatacaatttttaATTGACTTTTAAAGTTG
TCATGGACAATTTATTTATTACTcatcataattttttaattgaatccaca
cctattttttattttttcaccctAACCTATTATTTTCCCCCTATCTTCAG
CATACCAATAAGAAGTTAGCTACTCTGTAGCCCAAAACAACGAAACaacc
aatttttgtttttaactagTATAACAGATTGCTTGAACTTGACTttgaga
ccatgttcagaccATGTTTTGTATCGATCCGAAACGAACCAGTTCCGAAA
CACTGTGTTaataacgtcaaaattcgaaacgtcaaaaaagaagccGCTAC
AAACtgaaacagatcgaaacggatTCGTTCCATTTTTTCATCGTTTCAGT
TTCGTTGTTCCAAAATCAGTATGAACACTTCCTATCCGTAACAAATAAAT
ATCATATCGAAGCAAATCGATATTGAAACGTctaaatatgttcttaatta
TCTTTTCTACGCTCTATCATCTTATTCATGTTTTTTTGTTCTAGTGCTCA
TGGAGAGGGACGTTAGAGAGAACTTTATCAAATATCAGAAATCTACAACC
ATTAGGAAGCGGAAGTATCGATAGTTTTGATTTCACTTGGAGAGACAGAC
TAAGGAGATCCACAATGCATTGGGGTAGAAAGTTAAGAGGACAGACACGT
GAAGAACCAAATGAGTTTGTGAGGGAGAAAGCAATAAGGCATACAGTTGC
TACAGGAAGAACAGGCAGAGAGAAAGAGAGGAAAGTTCTGGagccaaaga
aaaaatatttagataATGAGACTATATTGAAGGAAGCAATGTTTTCTGGT
GGTTTTGAAGATATTGAAAGTTGTTATTCTTCAGATGAGTGAACTTCTAG
AACACTTTATGTATGAGAATAACCAAACTGGCACTCCTGTGTATTTGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013164XLOC_013164Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023396-exon-sc0000453-1491911889:148396..148456TCONS_00023396-exon-sc0000453-1491911889:148396..148456Clytia hemisphaericaexon
TCONS_00023396-exon-sc0000453-1510915933:148396..148456TCONS_00023396-exon-sc0000453-1510915933:148396..148456Clytia hemisphaericaexon
TCONS_00023396-exon-sc0000453-1575043694:148396..148456TCONS_00023396-exon-sc0000453-1575043694:148396..148456Clytia hemisphaericaexon
TCONS_00023396-exon-sc0000453-1491911889:166615..166734TCONS_00023396-exon-sc0000453-1491911889:166615..166734Clytia hemisphaericaexon
TCONS_00023396-exon-sc0000453-1510915933:166615..166734TCONS_00023396-exon-sc0000453-1510915933:166615..166734Clytia hemisphaericaexon
TCONS_00023396-exon-sc0000453-1575043694:166615..166734TCONS_00023396-exon-sc0000453-1575043694:166615..166734Clytia hemisphaericaexon
TCONS_00023396-exon-sc0000453-1491911889:167126..167293TCONS_00023396-exon-sc0000453-1491911889:167126..167293Clytia hemisphaericaexon
TCONS_00023396-exon-sc0000453-1510915933:167126..167293TCONS_00023396-exon-sc0000453-1510915933:167126..167293Clytia hemisphaericaexon
TCONS_00023396-exon-sc0000453-1575043694:167126..167293TCONS_00023396-exon-sc0000453-1575043694:167126..167293Clytia hemisphaericaexon
TCONS_00023396-exon-sc0000453-1491911889:167771..167851TCONS_00023396-exon-sc0000453-1491911889:167771..167851Clytia hemisphaericaexon
TCONS_00023396-exon-sc0000453-1510915933:167771..167851TCONS_00023396-exon-sc0000453-1510915933:167771..167851Clytia hemisphaericaexon
TCONS_00023396-exon-sc0000453-1575043694:167771..167851TCONS_00023396-exon-sc0000453-1575043694:167771..167851Clytia hemisphaericaexon
TCONS_00023396-exon-sc0000453-1491911889:168032..169594TCONS_00023396-exon-sc0000453-1491911889:168032..169594Clytia hemisphaericaexon
TCONS_00023396-exon-sc0000453-1510915933:168032..169594TCONS_00023396-exon-sc0000453-1510915933:168032..169594Clytia hemisphaericaexon
TCONS_00023396-exon-sc0000453-1575043694:168032..169594TCONS_00023396-exon-sc0000453-1575043694:168032..169594Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000453supercontigsc0000453:148396..169594 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.54182	2.33937	0.841651	0.748568	17.7193	11.6655	12.2447	13.5423	11.5315	10.4986	12.4947	11.1839	7.73979	7.65451	6.60003	6.58869	7.89483	6.94148	5.26384	6.72777	6.50103	7.36176	5.50123	6.26938	5.00707	5.4562	3.75277	2.32392	2.25014	2.34681
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00023396 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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