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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00023409 ID=TCONS_00023409|Name=TCONS_00023409|organism=Clytia hemisphaerica|type=transcript|length=1265bp
tatagatGTACCATGGAATCTGGAACTAGCTGGTTTAGTAATCCAAGTGA
CGCTGAGTCTGTCTTCAAAACCGAAGCTTTCAGATACTTGTCTGCCTCTG
GAAACAAAATCTATGCTCAATGCCTTGTCCGTGTTTGTCTGGATACTCAA
ACTAGCGCTGAATGTACACTTTGCTTTCCTGGTCTCAAACGTAAGAGACG
TAGTaccgaagaagaagaagaacccAGTGTTGGACAAATGGCTTTAATAA
AATCACCAGTCTTCTACATCattgaaaaaggtaGGTAGATTAAGAAGTGA
TGATCGAGTGATCGAAGATGTCAGTATTACGGTCTGGAAAACAGAAAATC
AAGGTGGCcttttttcgagtgtaaaactCCAGGGTATtcagtaaaatgag
gttaaAAATCCAGGatggtcagtaaaacgaggtcaAAAAATCTTCTAGGA
GAAATCTTTGGGTTTCTTATTCAATGTATGTTTGTGTTGATTAATGCCTA
TTTGCTGATACCGAGGGACTTCAACAATAGGCAACCAAATGGAACATAAA
GATATTCCTTTTCacaatattttgttcttttataGATACTCCAGCCCAAG
GAAGCCAAGAATCTTCAAGTGTCCTCAGTGGAACAAATGGATTGATTGTC
ATCATTCTTTTGGCAACTTTGGTGTTTGCTATTGCTGCTGCCATTGTCAA
GAAAGTTTTCTTCAGTGCTCCAGCTGCTGTTGCTTCACCAGTTGTTGCCT
ACAGTAACAAAGCTATGGCTTGAATATTAAAATTTATGAGAAAACTTCTT
CTAGGGTTTACTAACATTTGTCAAGATTTATTAATGtccttatatttttt
ataagaaaatcgtTTATCACCATCTTTATAcggtttcatttaaaaaaaat
tattgtaataagattaatttttttgtatttcattttttcttcaagaattt
tttttctattgtatATGGTCTGTAATTATGTTGGATTTTTGTGCCCTGTA
gcttttgattttataaaatgTTTCTATTAAGAAAAGAATAATTTAGTTCG
TTTTTTTTGTAGGAAAAAGCTTTGCTTATTTCACTTTCTCTCATAAGGtc
actttctttttttgtgATTGTGATTGGATCCcttttcccagctggcacac
aacgttgttacaatgttcatctaacgttatatggacgttatgaacgttaa
ataaacgttgaaacaacgttgtgtggcaGTTGGGTTCTATCAAAGAATGG
ACATCAAAAACACGC Run BLAST on NCBI transcript from alignment at sc0000453:271410..272674+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00023409 ID=TCONS_00023409|Name=TCONS_00023409|organism=Clytia hemisphaerica|type=transcript|length=1265bp|location=Sequence derived from alignment at sc0000453:271410..272674+ (Clytia hemisphaerica)
tatagatGTACCATGGAATCTGGAACTAGCTGGTTTAGTAATCCAAGTGA
CGCTGAGTCTGTCTTCAAAACCGAAGCTTTCAGATACTTGTCTGCCTCTG
GAAACAAAATCTATGCTCAATGCCTTGTCCGTGTTTGTCTGGATACTCAA
ACTAGCGCTGAATGTACACTTTGCTTTCCTGGTCTCAAACGTAAGAGACG
TAGTaccgaagaagaagaagaacccAGTGTTGGACAAATGGCTTTAATAA
AATCACCAGTCTTCTACATCattgaaaaaggtaGGTAGATTAAGAAGTGA
TGATCGAGTGATCGAAGATGTCAGTATTACGGTCTGGAAAACAGAAAATC
AAGGTGGCcttttttcgagtgtaaaactCCAGGGTATtcagtaaaatgag
gttaaAAATCCAGGatggtcagtaaaacgaggtcaAAAAATCTTCTAGGA
GAAATCTTTGGGTTTCTTATTCAATGTATGTTTGTGTTGATTAATGCCTA
TTTGCTGATACCGAGGGACTTCAACAATAGGCAACCAAATGGAACATAAA
GATATTCCTTTTCacaatattttgttcttttataGATACTCCAGCCCAAG
GAAGCCAAGAATCTTCAAGTGTCCTCAGTGGAACAAATGGATTGATTGTC
ATCATTCTTTTGGCAACTTTGGTGTTTGCTATTGCTGCTGCCATTGTCAA
GAAAGTTTTCTTCAGTGCTCCAGCTGCTGTTGCTTCACCAGTTGTTGCCT
ACAGTAACAAAGCTATGGCTTGAATATTAAAATTTATGAGAAAACTTCTT
CTAGGGTTTACTAACATTTGTCAAGATTTATTAATGtccttatatttttt
ataagaaaatcgtTTATCACCATCTTTATAcggtttcatttaaaaaaaat
tattgtaataagattaatttttttgtatttcattttttcttcaagaattt
tttttctattgtatATGGTCTGTAATTATGTTGGATTTTTGTGCCCTGTA
gcttttgattttataaaatgTTTCTATTAAGAAAAGAATAATTTAGTTCG
TTTTTTTTGTAGGAAAAAGCTTTGCTTATTTCACTTTCTCTCATAAGGtc
actttctttttttgtgATTGTGATTGGATCCcttttcccagctggcacac
aacgttgttacaatgttcatctaacgttatatggacgttatgaacgttaa
ataaacgttgaaacaacgttgtgtggcaGTTGGGTTCTATCAAAGAATGG
ACATCAAAAACACGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00023409-exon-sc0000453-1491911889:271410..272674 | TCONS_00023409-exon-sc0000453-1491911889:271410..272674 | Clytia hemisphaerica | exon |
| TCONS_00023409-exon-sc0000453-1510915933:271410..272674 | TCONS_00023409-exon-sc0000453-1510915933:271410..272674 | Clytia hemisphaerica | exon |
| TCONS_00023409-exon-sc0000453-1575043694:271410..272674 | TCONS_00023409-exon-sc0000453-1575043694:271410..272674 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000453 | supercontig | sc0000453:271410..272674 + |
Blast
The following BLAST results are available for this feature:
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