|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00023600 ID=TCONS_00023600|Name=TCONS_00023600|organism=Clytia hemisphaerica|type=transcript|length=1197bp
TTGTAATCGATAAACATTAATTCTTGTTTCTACGTCATTTTTTTTAACCT
CTTAGTAGGAGAACGTGTCCTTTaatgctattttcttttgttctatgtga
CGTAAAGACGCTTTGCAAATTGAAGTACTTTCACTAACTGACTTTAGCTT
TTTGACTATTTCTCAACACCCTTTCATGCTAATACATGCTAATAGTTATA
CACCTTTTATACCTCCTTCAAAGGAGGGTTATCTCAagaataaatgaaaa
agaaaaacaaagatgaaaagtgaaaaatttttctaccattttaaaaatca
tgacaTATGAAACTTTTTAGAATAGTTAAAACTTTGTTGATTTAAATTTG
TATTCAGATTTTTTGTACCTTTTctagataaaaagttacagctCTGTGAA
GTGGgtcatttttgctgtttttaggcctatttcAAAGGGCTGTAACATTT
TATCCTAGAAAGATACGAAAAATATTGGTTTGCTGTCACTGAAAGTTAAA
ACTCTAACATTAAAACAATTACAAACTGATGCACAATGAGATCGTTGGTa
taagaagggtgtcggaattataCACAAGGGAATGATTGTTTGCCAAACTC
AAAATTATATTGGTGGGTTTTATGAGTTTTCCTGTGGTATATATGAAGAC
TTCCCAGATTAAAGATAACGCTCCCATCAAATTCCGGCTTTTGTTTGTAa
actaaagataaaaaaatttaacccTTGGAATCAATGATTGAAACAAACAG
GGTTTTATGTTATCCAAGGCGCTAAAAAAGCCATTAGCACCAAAAATTAG
GGTCAGTCGTTAACCTTCATCATTTGTGGCcaatctcattggttgaaatt
taaaaaagactttcaGATGGAGAGAATTACGGAAGCCACTAAGAACAAGA
GAACACATTTTTATTGCAGATTTCCATTACAAACATTGCATGGGGAATAC
TTCTGTCAATGTGTATTATGTGTCAACTATGcccagttacatcaaaatgc
ctcgaaaatgtcaatatgaaaattgcgtaatcagagaacgtatgtctcgc
tcattataaaaaggccgagacaaactttcaataattggattgtaacatcg
agttNNttttccaacccggccaatctttaaaaaagaagcgaacaataaaa
tgtaattaccctttccaaataaacctcttcggtggcgagcgtagtct Run BLAST on NCBI transcript from alignment at sc0000456:225733..226929 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00023600 ID=TCONS_00023600|Name=TCONS_00023600|organism=Clytia hemisphaerica|type=transcript|length=1197bp|location=Sequence derived from alignment at sc0000456:225733..226929 (Clytia hemisphaerica)
agactacgctcgccaccgaagaggtttatttggaaagggtaattacattt
tattgttcgcttcttttttaaagattggccgggttggaaaaNNaactcga
tgttacaatccaattattgaaagtttgtctcggcctttttataatgagcg
agacatacgttctctgattacgcaattttcatattgacattttcgaggca
ttttgatgtaactgggCATAGTTGACACATAATACACATTGACAGAAGTA
TTCCCCATGCAATGTTTGTAATGGAAATCTGCAATAAAAATGTGTTCTCT
TGTTCTTAGTGGCTTCCGTAATTCTCTCCATCtgaaagtcttttttaaat
ttcaaccaatgagattgGCCACAAATGATGAAGGTTAACGACTGACCCTA
ATTTTTGGTGCTAATGGCTTTTTTAGCGCCTTGGATAACATAAAACCCTG
TTTGTTTCAATCATTGATTCCAAgggttaaatttttttatctttagttTA
CAAACAAAAGCCGGAATTTGATGGGAGCGTTATCTTTAATCTGGGAAGTC
TTCATATATACCACAGGAAAACTCATAAAACCCACCAATATAATTTTGAG
TTTGGCAAACAATCATTCCCTTGTGtataattccgacacccttcttatAC
CAACGATCTCATTGTGCATCAGTTTGTAATTGTTTTAATGTTAGAGTTTT
AACTTTCAGTGACAGCAAACCAATATTTTTCGTATCTTTCTAGGATAAAA
TGTTACAGCCCTTTgaaataggcctaaaaacagcaaaaatgacCCACTTC
ACAGagctgtaactttttatctagAAAAGGTACAAAAAATCTGAATACAA
ATTTAAATCAACAAAGTTTTAACTATTCTAAAAAGTTTCATAtgtcatga
tttttaaaatggtagaaaaatttttcacttttcatctttgtttttctttt
tcatttattctTGAGATAACCCTCCTTTGAAGGAGGTATAAAAGGTGTAT
AACTATTAGCATGTATTAGCATGAAAGGGTGTTGAGAAATAGTCAAAAAG
CTAAAGTCAGTTAGTGAAAGTACTTCAATTTGCAAAGCGTCTTTACGtca
catagaacaaaagaaaatagcattAAAGGACACGTTCTCCTACTAAGAGG
TTAAAAAAAATGACGTAGAAACAAGAATTAATGTTTATCGATTACAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00023600-exon-sc0000456-1491911889:225733..226929 | TCONS_00023600-exon-sc0000456-1491911889:225733..226929 | Clytia hemisphaerica | exon |
| TCONS_00023600-exon-sc0000456-1510915933:225733..226929 | TCONS_00023600-exon-sc0000456-1510915933:225733..226929 | Clytia hemisphaerica | exon |
| TCONS_00023600-exon-sc0000456-1575043694:225733..226929 | TCONS_00023600-exon-sc0000456-1575043694:225733..226929 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000456 | supercontig | sc0000456:225733..226929 . |
Blast
The following BLAST results are available for this feature:
|
