TCONS_00023604 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023604
Unique NameTCONS_00023604
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2884

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023604 ID=TCONS_00023604|Name=TCONS_00023604|organism=Clytia hemisphaerica|type=transcript|length=2884bp
TAAGAACGTGACAAAGGCGTTTGCCAAAATTATTATACAAAAAGCAGACT
GAGGTTCAGATAAAAAAGAGACGTCTCACCCCAGCTTTTCGTTAATTTTA
ACGGGTCGGGGAACTGGGATCGATTCCTCGACCCAAAACGTATGTGAATT
ACANCTTGCCAAAATTATTATACAAAAAGCAGACTGAGGTTCAGACAAAA
AAGAGACGTCTCACCCCAGCTTTTCGTTAATTTTAACGGGTCGGGGAACT
GGGATCGATTCCTCGACCCAAAACGTATGTGAATTACACGTATGTTTATT
ATTTGTTATTTACATGGAGTGTACATACTAAATATGAATCGTACAGACTG
GACATTTAAAAGGTTCTGACTTACCATATTCTACTCATTCACATTCGAAG
TCAACAAAGGAAGCGCTCACAGAATCTGTCCATTTGAAGTAAAAAACAAG
ATGTCAGACAAAACAGAATCCAATGTTGAGGTGAAGGATAAAGAAGAGGA
AAAAACGGATCATGAAGAAAACAAGGGAGGCAATGGAGGAGATGGCGGGA
CGGGCGGTGGTGGTGAGGGAGATGGTGAGACGGGCGGTGATACTAAGAAG
GGTGGAAAAGACAGCAGCCAAGAAGCCTATATGTCGTACGATGATATTCG
CGAGGCCCTGACTGTCATTGGTGCAAAGAATCCTGAGAAGTTGTCAGCCA
AAGATTTAAGAAGTTATTTACCATACACTAATGGGAAAGTTACACCAAAA
GATCTTGACATGTTTATCAAAATCAGATCTGATAACAGAAGATATGAAAT
GCTGACTATTCCAGATCTACCTCAGGACAAAATACTAACTCGGGCAGAAA
TGCAAAGCGTTGGTCCAATAGAGCTTGATAAGCGCCTGGAAGTTGTCAAA
GGGGAAATTAAAGATCAAGCTCGTGCACCAATcgatttttcagaaatgaa
GGCTCGTGATTGGATGAAAGTGATTGTTAACTGTAANGACTCGGGCAGAA
ATGCAAAGCGTTGGTCCAATCGAGCTTGATAAGCGCCTAGAAGTGGTCAA
AGGGGAAATTAAAGATCAAGCTCGTGCACCAATcgatttttcagaaatga
aGGCTCGTGATTGGATGAAAGTGATTGTTAACTGTAATATGACTTATGGA
AGGATCTTCAAAAAACTGGGTGGCGATGGCGTTTCAGATTTGGCAGAANA
TATGACTTATGGAAGGATCTTCAAAAAACTGGGTGGCGATGGCGTTTCAG
ATTTGGCAGAAGAACCAATGTTTTTCCCACCCAATGAATCATTATTTGGG
ACACCCGACTTCAAGGTTTCTCAAGTGGCCTTGAGTTATCACCAAAGATC
TGAGCTGGCAGAAAATTTCGATGATAAATCTGTAATGGCAAATTTTAATG
TTGCTGCTTCATTTTCAACACCTTGGGTGGCTGGAAGTGCTGAGTATTCG
CATGAAAAGCAAAACAGAACCGTCGAGAAGAATTCTACNATGTTGCTGCT
TCATTTTCAACACCTTGGGTGGCTGGAAGTGCTGAGTATTCGCATGAAAA
GCAAAACAGAACCGTCGAGAAGAATTCTACCGTTAAATCAGTCTTCAAAG
TTGAGGTGCCTGTTGGCGTGTTTACACTGCCGCGTCCATCAGAGTTGGAG
GAATCCAAAATCAAGATAAATGACCAATTCAAATCGTTCGTCAACAAATA
TCTAGAGGACAACCCTAAATGTAAACGAGTGGATGTTCAAAGAGCAATGT
CGGAGCGTTATGGAGATATTGTACCGAGAAGTGTAAAGATTGGAGTTGCG
TGCTATACTACCAATACCACCACaacaaaagaaaagcaaaacttGGAATC
AGTGTCTGATTCTTTCAAAGCAAGCGTTACCGCTTCTTTCGGTTGTTTTA
GCGGAAGTGTATCTGGTGGAGGTGGCAAAAGCAGCAAAACGGAAAGTGGA
AGCAAATCTCAAGAAAACACTTACGCATTTTCAGCCATTGCTGGAAGTCT
TCCAGATCCAAGCAATCCGATGTCAGTGGCAGACTACCGTTTGCTACCAA
ACAGCTGGAGAATCATCGACTTTGGAAGTGAATTTACTCCAGTTTTTGAT
TATCTTGATGAAGAAACAAAAGATAAACTGCGCAGATTGGAAGCCAGGGG
CAAAAATGGTAGCCTTTATCATGCAAGTATTTTACAAAAAGGCGAAGATT
TGGTATGCGGTGCTTATAGATTGGTCATCGAGGATGATGGTGATCTAGTC
TTAAAATGTGGTCCATATTCCAACGTCGTTTGGAATGCTGGTACAGCAAA
AACAAAAGCAAGTAAATTGAAACTTGGAGTTGACGGGAATTTGGTCTTGA
GTGACCCAGATGGCAATTTATGTTGGTCTACAGACACCGCTGGTAAAggc
attgaaaaattttccgttTTGGGCGGTGGCAATTTTGTTGGGTACAAAGG
AGATGACATTGTGTGGCAAACTGACACTGCTGGCAAATTCAGTGGCGATG
GAGCAGCCATGTATCCCGGAGCAACACTGAGGCCTGGGAACAAACTTGTC
AATAGCAGTGGAATAGCTGAAGTCTGTATGGAGATGAACGGTGACTTGGT
CATCAAATATGGCGAAGGGCCAAACAAGAAAGTGGTGTATTCATCGGGTA
CCAAAAACAAGCCGGTCACAGGATTGGTTTTTCAGAAAGATCGTAATTTA
TGTATATACGATTATAACGGTGAATGTGTCTGGAACGCTGGCGTTGCTGA
TAGAAAAGCAGATATCTATATAGTCACAGGAGCAAAAAATCTTGAAGGAT
ATGTCTACGAAACTGATGATGGCGAAAAGAGGCATTTCATTGGTAGTGCT
ATCAACTGGGGCATGTAAAAAGGGTCTTATATCA
Run BLAST on NCBI

protein sequence of TCONS_00023604-protein

>TCONS_00023604-protein ID=TCONS_00023604-protein|Name=TCONS_00023604-protein|organism=Clytia hemisphaerica|type=polypeptide|length=373bp
MSERYGDIVPRSVKIGVACYTTNTTTTKEKQNLESVSDSFKASVTASFGC
FSGSVSGGGGKSSKTESGSKSQENTYAFSAIAGSLPDPSNPMSVADYRLL
PNSWRIIDFGSEFTPVFDYLDEETKDKLRRLEARGKNGSLYHASILQKGE
DLVCGAYRLVIEDDGDLVLKCGPYSNVVWNAGTAKTKASKLKLGVDGNLV
LSDPDGNLCWSTDTAGKGIEKFSVLGGGNFVGYKGDDIVWQTDTAGKFSG
DGAAMYPGATLRPGNKLVNSSGIAEVCMEMNGDLVIKYGEGPNKKVVYSS
GTKNKPVTGLVFQKDRNLCIYDYNGECVWNAGVADRKADIYIVTGAKNLE
GYVYETDDGEKRHFIGSAINWGM
Run BLAST on NCBI

transcript from alignment at sc0000457:60200..66174+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023604 ID=TCONS_00023604|Name=TCONS_00023604|organism=Clytia hemisphaerica|type=transcript|length=5975bp|location=Sequence derived from alignment at sc0000457:60200..66174+ (Clytia hemisphaerica)
TAAGAACGTGACAAAGGCGTTTGCCAAAATTATTATACAAAAAGCAGACT GAGGTTCAGATAAAAAAGAGACGTCTCACCCCAGCTTTTCGTTAATTTTA ACGGGTCGGGGAACTGGGATCGATTCCTCGACCCAAAACGTATGTGAATT ACANCTTGCCAAAATTATTATACAAAAAGCAGACTGAGGTTCAGACAAAA AAGAGACGTCTCACCCCAGCTTTTCGTTAATTTTAACGGGTCGGGGAACT GGGATCGATTCCTCGACCCAAAACGTATGTGAATTACACGTATGTTTATT ATTTGTTATTTACATGGAGTGTACATACTAAATATGAATCGTACAGACTG GACATTTAAAAGGTTCTGACTTACCATATTCTACTCATTCACATTCGAAG TCAACAAAGGAAGGTACGTTACTTTAGAAGAACTTTGGTGAACTAGCAAA TTcgaatgaaaaaattttgaagggaaaaattatttatttcgTGAGTGGGA GATAAGATCTATATTTTATAATCAGATCAAGTTTCGTgggattttcaatt ttgttggaTTTTTCTTGATGATAAACAAGTGCCAAGATCGACTTTTACTG ATTTTGACTTGAAGGAAAGATCTCCATCATAGTTGATACATTTCATCTAC ATAACGTACAACTTCCTTATCAATAGCGCTCACAGAATCTGTCCATTTGA AGTAAAAAACAAGATGTCAGACAAAACAGGTAACTTTTTCAGAACTGTAC CCGGAGTGAGGTGTCCAAAACTcacgaaaatttaaatttcctctctcaaa gggtcgtgtTTCTTTCGTGAGGACGAAAAGTCGtaaaattcacgacattt actttcacgaaaacggcctgaaatttttaaaaactgtaccggggggtact taggtgccaggtatgtgcgagccaaAGGGTTGAAAGTCTCTCAAACGGTA Cagaaaccattaaaaagcaaattatgtctctgtaagggtccaaaattcac gaaagtcgaaattttaagatttaaaaatccagtgaaaatcgacaaaactt ttgagaaaagtctctctaatgGTCCCAAAAACGCCAACTCTtgctctctc taagggtcgattttacatttttggctcagacatacccgtcacctcgcaaa cctagtaacCTCCCGGAACtgtataccttaagggaacttattttggcagg aACTATTTTTGGCGAGcggcaaaaatcctgaaaatgtttaactttggcga gaacttatttttgcgattgatgaattttttcaattttggcgggaactaat tattttggcgaatgaaagcctaaatctgttctattttgccttatttgaag ttttttttgtgaactcaTAAAGTTATTTAAtggagcggtcattaagtaaa gCATATACCGGGGTGGAAGGGATTTGGATAGGGCATGCAATTTTTTCCCT CTTTTGGGTAGGGTATGAAAAAAACTTGAaggctttaaatttcattttaa caaaaatttcaattttgtcgCAATTCTAAAACTCCATTATTTCTGCAAAC CCTAAAATCtgagaaattttaaagtgcCATAAAGCTGCCATCTTGTAAGG GGTAGGGTACGAAAATTTTCATCCAATTTTTGGTAGGGCATGAAATTTAT TAGAGAACTTTTGGTAGGGTATGAAAATAAGAAGTCCGCCAAAAAAATCC CTTCCACCCCGGTATATGCTATACTTAATGACCATTCCCTaaggcaaaat accaaaaaatttgattttgttttggcatttattttggcgagtgagcaaaa tattgaattttggcgggaactaattttggcgaattttatctaaattcgcc gaattcgccaaaattagttccttacaaaataagttcccttattAAGGTAA TCAAAAACATTTCCATGTTCAGTTACAGAAAAGTTTCGAAACTATGGAAT CTAATTCATGGAATGATGCAATACAACTtctacaaaatttacaaaatttg ccttgacCGGAGGCCTCCGGGTACCTAGGGTatacttgctctgtttgggg gtagtttttctctgtttgagggtaatttgaatgtccagggggtcatcaac tgatgcttgtccaggggttaGACCTGTTGTCTGGGGGTGGGGGGTGgtgg taaatttccaaaaaacgtTATATCCTCCCCCTCCCATATTAATTTttctt ctggaaaagcccaatggaGATGGAAAAACGAAGCCGGTTAAAAAAATCAT GACAATCAGACGTTTTAGAATAATTGAGCTTTTTGAACCTCTGTAAAGTA GACTATTTTTAGTTCTACTTCAAAGGCGGACTGTAGCTTTTTATCCGATG AAAATACGAGAAATCTGAATCAAATATATAAATTGTTTAATAGGTAATGC GTCCATATACATTTGAGACAGCACAGACTGATTAAATTAGTGATGAGTGA TCGTTGACTTTTTAGAATCCAATGTTGAGGTGAAGGATAAAGAAGAGGAA AAAACGGATCATGAAGAAAACAAGGGAGGCAATGGAGGAGATGGCGGGAC GGGCGGTGGTGGTGAGGGAGATGGTGAGACGGGCGGTGATACTAAGAAGG GTGGAAAAGACAGCAGCCAAGAAGCCTATATGTCGTACGATGATATTCGC GAGGCCCTGACTGTCATTGGTGCAAAGAATCCTGAGAAGTTGTCAGCCAA AGATTTAAGAAGTTATTTACCATACACTAATGGGAAAGTTACACCAAAAG ATCTTGACATGTTTATCAAAATCAGATCTGATAACAGAAGATATGAAATG CTGACTATTCCAGATCTACCTCAGGACAAAATACTAACTCGGGCAGAAAT GCAAAGCGTTGGTCCAATAGAGCTTGATAAGCGCCTGGAAGTTGTCAAAG GGGAAATTAAAGATCAAGCTCGTGCACCAATcgatttttcagaaatgaaG GCTCGTGATTGGATGAAAGTGATTGTTAACTGTAANGACTCGGGCAGAAA TGCAAAGCGTTGGTCCAATCGAGCTTGATAAGCGCCTAGAAGTGGTCAAA GGGGAAATTAAAGATCAAGCTCGTGCACCAATcgatttttcagaaatgaa GGCTCGTGATTGGATGAAAGTGATTGTTAACTGTAATATGACTTATGGAA GGATCTTCAAAAAACTGGGTGGCGATGGCGTTTCAGATTTGGCAGAANAT ATGACTTATGGAAGGATCTTCAAAAAACTGGGTGGCGATGGCGTTTCAGA TTTGGCAGAAGAACCAATGTTTTTCCCACCCAATGAATCATTATTTGGGA CACCCGACTTCAAGGTTTCTCAAGTGGCCTTGAGTTATCACCAAAGATCT GAGCTGGCAGAAAATTTCGATGATAAATCTGTAATGGCAAATTTTAATGT TGCTGCTTCATTTTCAACACCTTGGGTGGCTGGAAGTGCTGAGTATTCGC ATGAAAAGCAAAACAGAACCGTCGAGAAGAATTCTACNATGTTGCTGCTT CATTTTCAACACCTTGGGTGGCTGGAAGTGCTGAGTATTCGCATGAAAAG CAAAACAGAACCGTCGAGAAGAATTCTACCGTTAAATCAGTCTTCAAAGT TGAGGTGCCTGTTGGCGTGTTTACACTGCCGCGTCCATCAGAGTTGGAGG AATCCAAAATCAAGATAAATGACCAATTCAAATCGTTCGTCAACAAATAT CTAGAGGACAACCCTAAATGTAAACGAGTGGATGTTCAAAGAGCAATGTC GGAGCGTTATGGAGATATTGTACCGAGAAGTGTAAAGATTGGAGTTGCGT GCTATACTACCAATACCACCACaacaaaagaaaagcaaaacttGGAATCA GTGTCTGATTCTTTCAAAGCAAGCGTTACCGCTTCTTTCGGTTGTTTTAG CGGAAGTGTATCTGGTGGAGGTGGCAAAAGCAGCAAAACGGAAAGTGGAA GCAAATCTCAAGAAAACACTTACGCATTTTCAGCCATTGCTGGAAGTCTT CCAGATCCAAGCAATCCGATGTCAGTGGCAGACTACCGTTTGCTACCAAA CAGCTGGAGAATCATCGACTTTGGAAGTGAATTTACTCCAGTTTTTGATT ATCTTGATGAAGAAACAAAAGATAAACTGCGCAGATGTAAGTAGTATCAT ACTTGTTCTCTTTGATTccctaatttttcaaatatcaatGATTCAATACG CAACATTAAAATTTAATTGTAAATAGCGGATTGGTCAGCTATTTATAGAG TGGAATCATGTTATTTTCTCTTATTATTAGTAGTGGAGAGGCGTTAGCAN TATTTATAGAGTGGAATCATGTTATTTTCTCTTATTATTAGTAGTGGAGA GGCGTTAGCAATAAATGTTACCTTCACCCCGGGGTCAACTCATCTTATGT TCTCTTTGGGAAATAATTGAGTACCGTTTTCTGACATAAGAGGAGGTATA CCAGACATTGCATCTGGGGTAGCGAGGTAGCTCACATGAATAAGCATTCG CGTTAACAATATTTCTTCTACGCTTGTTCAAACAATGCCATTAATGCATA CTTGGCATCAATTTACCCTTACTCTATATAAATATTTGACAACCTGGTGA AGTGCTGAATGAGGATGAAATATTCCAGAAAGTTGATNATGTTCTCTTTG GGAAATAATTGAGTACCGTTTTCTGACATAAGAGGAGGTATACTAAACAT TGCATCTGGGGTGGTGAGGTAGCTCACATGAATAAGCATTCACGTTAACA ATCTTTCTTCTACGCTTGTTCAAACAATGCCATTAATGCCATACTTGGCA TCAATTTACCCTTTCTCTATATAAATATTTGACAACCTGGTGAAGTTCTG AATGAGGATGAAATATTCTAGAaagttgattttactttttttttgaaaaa tacaaatgacCACTTTTCTTATAGTGGAAGCCAGGGGCAAAAATGGTAGC CTTTATCATGCAAGTATTTTACAAAAAGGCGAAGATTTGGTATGCGGTGC TTATAGATTGGTCATCGAGGATGATGGTGATCTAGTCTTAAAATGTGGTC CATATTCCAACGTCGTTTGGAATGCTGGTACAGCAAAAACAAAAGCAAGT AAATTGAAACTTGGAGTTGACGGGAATTTGGTCTTGAGTGACCCAGATGG CAATTTATGTTGGTCTACAGACACCGCTGGTAAAggcattgaaaaatttt ccgttTTGGGCGGTGGCAATTTTGTTGGGTACAAAGGAGATGACATTGTG TGGCAAACTGACACTGCTGGCAAATGTAAAAACCCTTCTCTTAACTTTCC AAatgttcttttcaatttttatacGAATAGACTAATTTGCAAATCTTTCA GTTTGGTGAAACtattctttaaaaataaattttacggGAAGAATTGACTC CAAACCCAGACTTTCTCAGAGCTTATTTATGACAACATTTTTGGCAACTT TTCAATGTATTTTGAATAACAAAGGCCTAATGAATTATCCAatacaagaa actttttgattcgAGGGAAGAATAGCGACTAATAAAACGAGGTTTATCCA CTTAAAAACCATACTGTTTTCTGTTTCAGTCAGTGGCGATGGAGCAGCCA TGTATCCCGGAGCAACACTGAGGCCTGGGAACAAACTTGTCAATAGCAGT GGAATAGCTGAAGTCTGTATGGAGATGAACGGTGACTTGGTCATCAAATA TGGCGAAGGGCCAAACAAGAAAGTGGTGTATTCATCGGGTACCAAAAACA AGCCGGTCACAGGATTGGTTTTTCAGAAAGATCGTAATTTATGTATATAC GATTATAACGGTGAATGTGTCTGGAACGCTGGCGTTGCTGATAGAAAAGC AGATATCTATATAGTCACAGGAGCAAAAAATCTTGAAGGATATGTCTACG AAACTGATGATGGCGAAAAGAGGCATTTCATTGGTAGTGCTATCAACTGG GGCATGTAAAAAGGGTCTTATATCA

Coding sequence (CDS) from alignment at sc0000457:60200..66174+

>TCONS_00023604 ID=TCONS_00023604|Name=TCONS_00023604|organism=Clytia hemisphaerica|type=CDS|length=3366bp|location=Sequence derived from alignment at sc0000457:60200..66174+ (Clytia hemisphaerica)
ATGTCGGAGCGTTATGGAGATATTGTACCGAGAAGTGTAAAGATTGGAGT
TGCGTGCTATACTACCAATACCACCACaacaaaagaaaagcaaaacttGG
AATCAGTGTCTGATTCTTTCAAAGCAAGCGTTACCGCTTCTTTCGGTTGT
TTTAGCGGAAGTGTATCTGGTGGAGGTGGCAAAAGCAGCAAAACGGAAAG
TGGAAGCAAATCTCAAGAAAACACTTACGCATTTTCAGCCATTGCTGGAA
GTCTTCCAGATCCAAGCAATCCGATGTCAGTGGCAGACTACCGTTTGCTA
CCAAACAGCTGGAGAATCATCGACTTTGGAAGTGAATTTACTCCAGTTTT
TGATTATCTTGATGAAGAAACAAAAGATAAACTGCGCAGATTGGAAGCCA
GGGGCAAAAATGGTAGCCTTTATCATGCAAGTATTTTACAAAAAGGCGAA
GATTTGGTATGCGGTGCTTATAGATTGGTCATCGAGGATGATGGTGATCT
AGTCTTAAAATGTGGTCCATATTCCAACGTCGTTTGGAATGCTGGTACAG
CAAAAACAAAAGCAAGTAAATTGAAACTTGGAGTTGACGGGAATTTGGTC
TTGAGTGACCCAGATGGCAATTTATGTTGGTCTACAGACACCGCTGGTAA
AggcattgaaaaattttccgttTTGGGCGGTGGCAATTTTGTTGGGTACA
AAGGAGATGACATTGTGTGGCAAACTGACACTGCTGGCAAATTCAGTGGC
GATGGAGCAGCCATGTATCCCGGAGCAACACTGAGGCCTGGGAACAAACT
TGTCAATAGCAGTGGAATAGCTGAAGTCTGTATGGAGATGAACGGTGACT
TGGTCATCAAATATGGCGAAGGGCCAAACAAGAAAGTGGTGTATTCATCG
GGTACCAAAAACAAGCCGGTCACAGGATTGGTTTTTCAGAAAGATCGTAA
TTTATGTATATACGATTATAACGGTGAATGTGTCTGGAACGCTGGCGTTG
CTGATAGAAAAGCAGATATCTATATAGTCACAGGAGCAAAAAATCTTGAA
GGATATGTCTACGAAACTGATGATGGCGAAAAGAGGCATTTCATTGGTAG
TGCTATCAACTGGGGCATGTAAATGTCGGAGCGTTATGGAGATATTGTAC
CGAGAAGTGTAAAGATTGGAGTTGCGTGCTATACTACCAATACCACCACa
acaaaagaaaagcaaaacttGGAATCAGTGTCTGATTCTTTCAAAGCAAG
CGTTACCGCTTCTTTCGGTTGTTTTAGCGGAAGTGTATCTGGTGGAGGTG
GCAAAAGCAGCAAAACGGAAAGTGGAAGCAAATCTCAAGAAAACACTTAC
GCATTTTCAGCCATTGCTGGAAGTCTTCCAGATCCAAGCAATCCGATGTC
AGTGGCAGACTACCGTTTGCTACCAAACAGCTGGAGAATCATCGACTTTG
GAAGTGAATTTACTCCAGTTTTTGATTATCTTGATGAAGAAACAAAAGAT
AAACTGCGCAGATTGGAAGCCAGGGGCAAAAATGGTAGCCTTTATCATGC
AAGTATTTTACAAAAAGGCGAAGATTTGGTATGCGGTGCTTATAGATTGG
TCATCGAGGATGATGGTGATCTAGTCTTAAAATGTGGTCCATATTCCAAC
GTCGTTTGGAATGCTGGTACAGCAAAAACAAAAGCAAGTAAATTGAAACT
TGGAGTTGACGGGAATTTGGTCTTGAGTGACCCAGATGGCAATTTATGTT
GGTCTACAGACACCGCTGGTAAAggcattgaaaaattttccgttTTGGGC
GGTGGCAATTTTGTTGGGTACAAAGGAGATGACATTGTGTGGCAAACTGA
CACTGCTGGCAAATTCAGTGGCGATGGAGCAGCCATGTATCCCGGAGCAA
CACTGAGGCCTGGGAACAAACTTGTCAATAGCAGTGGAATAGCTGAAGTC
TGTATGGAGATGAACGGTGACTTGGTCATCAAATATGGCGAAGGGCCAAA
CAAGAAAGTGGTGTATTCATCGGGTACCAAAAACAAGCCGGTCACAGGAT
TGGTTTTTCAGAAAGATCGTAATTTATGTATATACGATTATAACGGTGAA
TGTGTCTGGAACGCTGGCGTTGCTGATAGAAAAGCAGATATCTATATAGT
CACAGGAGCAAAAAATCTTGAAGGATATGTCTACGAAACTGATGATGGCG
AAAAGAGGCATTTCATTGGTAGTGCTATCAACTGGGGCATGTAAATGTCG
GAGCGTTATGGAGATATTGTACCGAGAAGTGTAAAGATTGGAGTTGCGTG
CTATACTACCAATACCACCACaacaaaagaaaagcaaaacttGGAATCAG
TGTCTGATTCTTTCAAAGCAAGCGTTACCGCTTCTTTCGGTTGTTTTAGC
GGAAGTGTATCTGGTGGAGGTGGCAAAAGCAGCAAAACGGAAAGTGGAAG
CAAATCTCAAGAAAACACTTACGCATTTTCAGCCATTGCTGGAAGTCTTC
CAGATCCAAGCAATCCGATGTCAGTGGCAGACTACCGTTTGCTACCAAAC
AGCTGGAGAATCATCGACTTTGGAAGTGAATTTACTCCAGTTTTTGATTA
TCTTGATGAAGAAACAAAAGATAAACTGCGCAGATTGGAAGCCAGGGGCA
AAAATGGTAGCCTTTATCATGCAAGTATTTTACAAAAAGGCGAAGATTTG
GTATGCGGTGCTTATAGATTGGTCATCGAGGATGATGGTGATCTAGTCTT
AAAATGTGGTCCATATTCCAACGTCGTTTGGAATGCTGGTACAGCAAAAA
CAAAAGCAAGTAAATTGAAACTTGGAGTTGACGGGAATTTGGTCTTGAGT
GACCCAGATGGCAATTTATGTTGGTCTACAGACACCGCTGGTAAAggcat
tgaaaaattttccgttTTGGGCGGTGGCAATTTTGTTGGGTACAAAGGAG
ATGACATTGTGTGGCAAACTGACACTGCTGGCAAATTCAGTGGCGATGGA
GCAGCCATGTATCCCGGAGCAACACTGAGGCCTGGGAACAAACTTGTCAA
TAGCAGTGGAATAGCTGAAGTCTGTATGGAGATGAACGGTGACTTGGTCA
TCAAATATGGCGAAGGGCCAAACAAGAAAGTGGTGTATTCATCGGGTACC
AAAAACAAGCCGGTCACAGGATTGGTTTTTCAGAAAGATCGTAATTTATG
TATATACGATTATAACGGTGAATGTGTCTGGAACGCTGGCGTTGCTGATA
GAAAAGCAGATATCTATATAGTCACAGGAGCAAAAAATCTTGAAGGATAT
GTCTACGAAACTGATGATGGCGAAAAGAGGCATTTCATTGGTAGTGCTAT
CAACTGGGGCATGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013270XLOC_013270Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023604-proteinTCONS_00023604-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023604-exon-sc0000457-1491911889:60200..60612TCONS_00023604-exon-sc0000457-1491911889:60200..60612Clytia hemisphaericaexon
TCONS_00023604-exon-sc0000457-1510915933:60200..60612TCONS_00023604-exon-sc0000457-1510915933:60200..60612Clytia hemisphaericaexon
TCONS_00023604-exon-sc0000457-1575043694:60200..60612TCONS_00023604-exon-sc0000457-1575043694:60200..60612Clytia hemisphaericaexon
TCONS_00023604-exon-sc0000457-1491911889:60876..60928TCONS_00023604-exon-sc0000457-1491911889:60876..60928Clytia hemisphaericaexon
TCONS_00023604-exon-sc0000457-1510915933:60876..60928TCONS_00023604-exon-sc0000457-1510915933:60876..60928Clytia hemisphaericaexon
TCONS_00023604-exon-sc0000457-1575043694:60876..60928TCONS_00023604-exon-sc0000457-1575043694:60876..60928Clytia hemisphaericaexon
TCONS_00023604-exon-sc0000457-1491911889:62665..64335TCONS_00023604-exon-sc0000457-1491911889:62665..64335Clytia hemisphaericaexon
TCONS_00023604-exon-sc0000457-1510915933:62665..64335TCONS_00023604-exon-sc0000457-1510915933:62665..64335Clytia hemisphaericaexon
TCONS_00023604-exon-sc0000457-1575043694:62665..64335TCONS_00023604-exon-sc0000457-1575043694:62665..64335Clytia hemisphaericaexon
TCONS_00023604-exon-sc0000457-1491911889:65124..65474TCONS_00023604-exon-sc0000457-1491911889:65124..65474Clytia hemisphaericaexon
TCONS_00023604-exon-sc0000457-1510915933:65124..65474TCONS_00023604-exon-sc0000457-1510915933:65124..65474Clytia hemisphaericaexon
TCONS_00023604-exon-sc0000457-1575043694:65124..65474TCONS_00023604-exon-sc0000457-1575043694:65124..65474Clytia hemisphaericaexon
TCONS_00023604-exon-sc0000457-1491911889:65779..66174TCONS_00023604-exon-sc0000457-1491911889:65779..66174Clytia hemisphaericaexon
TCONS_00023604-exon-sc0000457-1510915933:65779..66174TCONS_00023604-exon-sc0000457-1510915933:65779..66174Clytia hemisphaericaexon
TCONS_00023604-exon-sc0000457-1575043694:65779..66174TCONS_00023604-exon-sc0000457-1575043694:65779..66174Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000457supercontigsc0000457:60200..66174 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.15533 0.740001 1.21635 0.399418 0.339825 0.247103 0.323975 0.351191 0.0488503 0.221497 0.0293658 0.0386078 25.7565 20.0177 0.625073 0.452518 0.21759 0.183687 153.118 134.142 0.346225 0.431573 0.623477 0.801859 2.09322 1.76648 0 0.0194084 0.25025 0.209971
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001480Bulb-type_lectin_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00023604 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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