TCONS_00023632 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00023632
Unique Name	TCONS_00023632
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1007

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000457:225926..238071+

transcript sequence

>TCONS_00023632 ID=TCONS_00023632|Name=TCONS_00023632|organism=Clytia hemisphaerica|type=transcript|length=1007bp
TGGTGACTGGGTATTATGCgaagaaatcatttttgatgaaatttttgGAT
CAATATGGCGTATGTCAGGAAGTTGACAGCGCTGGGATTTCACAATTCTC
AAACATTTTCATTGCAAGACGAGAAGCAAGTTCGTAACTTGGTCGTATGG
TTAGAAGATCAAAAGATTCGCTTTTACGATACAAAAGATCGAGAGCCTTT
GCGAGATGTGGAGAGTCAATATTGGATTGGTGCTCTGAAAAAGtATTTGA
GTGATCTGAAATGTCCTGTTGacaatttgaatgaaaaaggtGTCATTGTT
AATTGGTTGCTAAGCTACGCTGTCCATTTAGAATTCGAAGAAAATGCATC
AAAGTACAACGATGAATCAACTAACCGTCCGATATCCAAAGTGGACACGA
ACTCATGGCTCCATTCAATCGATGCGAACGATGGTGACTTGATCAAAGGG
ATTGAGGTTTTGAGGCAAGCGTTACGAATACCAAACCACCCAAATCACAT
AACTGTGTTACAAGCTGTTTCCAAACTGATTCAAGAACGTCTAGCTTCGA
AGCATATGAAAACAAATACCCCAAAACAGAAAACAACATACGTTGACCTT
GATGAGATTCCGCTTGGCTTCAATATCGACGATTCAGCAGTCCGTGAAGC
AGCCAAGATTCTCCGACTCCTACAAATTCATCAACTGCGAGATTTACAAA
ctaaaatcaaccaatcaatcgtCACTGTCCAAATGTTAAGCGCAAACCCA
AAGACGGATCAATCGCTTGGTAAAGTTGGCCGCTGATAAACATGGTTGCA
ATCTCTTTGAGTATTTTATAGGTATTCGCTTATTGGTAGGGTTTTTTTTC
GTGAAAGTGATTTTATATAGTGGTTATCCATCGTTTGTTGTGTTttatat
ttaaatttaaaagtttataaaaacaatttaaattataaacaaaaccaaaa
catACAAGAACGATTAAATTTTTATAGTGCACTGGGTGactcacaaaaaa
aattttg

Run BLAST on NCBI

transcript from alignment at sc0000457:225926..238071+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00023632 ID=TCONS_00023632|Name=TCONS_00023632|organism=Clytia hemisphaerica|type=transcript|length=12146bp|location=Sequence derived from alignment at sc0000457:225926..238071+ (Clytia hemisphaerica)
TGGTGACTGGGTATTATGCgaagaaatcatttttgatgaaatttttggta
aGCAACTATAACTAACTTTCAATGTATTTCTgttcaatatttttcgaaat
ttgtgttttttttgggaaattcttATCGACGATTGCAAGAAATGTTTTTC
CAACATTCGTTTTGACGTTTAAACTGGATGGTGTATTAAACCATATGatt
tttcgttttcttgattttggGCGATTATTTGTTCGTTTGTTGTAAGTAAT
TGATTCCCTGTAACCGCTTGATTTGAGTGTATCGTTATATCGTGGTACTG
CTTTTTTGGAGGAAGTATATCTTTACATTTTTAGGGAagaatttttctct
attttttacGCAGTAGCATTTCTTACTCTTACCTTCAATTTGCAAAGAGA
TTATTCTAGGTTGAGGGTTGTTGTTACCATGTtcttttttagcattttga
gccgaatttttcattctaaaattgttcttataaactcgTTTTTACCAAAA
GAAGAGTGTAACAAGCTTTTGAAGGATTTACTGAAAAAGGCGGTGATAAT
AATCTTTCTTTTGAGCCATTTTTCTGCGTatttgaaaatagaaatttgat
taCCTTTGATTACAATCCCCGAAAGCGAGGGCTGggtgggttaccagacc
tcccgctgcaaaattcttgacgcggtcttgcaaaatttcgtaattccaga
tgttgaaaattttcccgacatcaatttttctctttgatttgcatatactc
tttttttataagaaccagtaatttttttttaaagctcgacttttcttatt
ttctttggAACTTGGAGCCTGAAATTCTTCTGATCCTGCTCTTATTTCTA
GGATAAAACTGAGGTATTAAGGTTTAATACCCTAATTTCACTAATTTAGA
CCTTAATTTGTGTAAAATTCAGGCATTTTCCAGGCACagcatttttctta
aattgttcttattttccaacATTTTTTGGACCTCGTTGctcttaaaaatt
tcttttgataaaaaaaagagaactCCGCAATCTTTCTCGTACACTATAGA
CctcaaattacagaaattactaTGATAATTATTCAATCTCACTAATGTAT
AAGAACAATAGGACTAAAGTAGTAAAAACAGAATAAACCAAAAATAACTT
TGTTctgaaagtgcaaaaaaaaacaacaaaggaaCAATacttattaaaaa
tttactttcaACTCAAAGTGTACATACCTATAAATAATTCCCAGTTTTCT
GGGAAAACTCGTCTTCGTCCTCCACAAATGATAAACAACCTTCAAGAGCC
AACAACACTTTCATTATGGAGAACAACAACACAACATACAATCATCCATA
TTGCTCTAAACTTCAACGGTTTTCATCAGACTCTATTGTTTTCAGGAGTT
TCCACGTTTTCCACATTCTATACTTGTTGCTGTTCGTATCAACGTTGGGT
CTTCACACATGCGTGATGTATGCTTTTTACAAACTATCATACTACAAGAC
GTTCCATCATCGATTTTTGATCGTTTTATCTATAACTGATTTGTTTTCAA
GCTTCACAACATATCCTCTGCAAATATACAAATTTATCTTCTTAATAAAT
ATGCAAAATACACAGGATTGTATATTCTTTAACGCGCTTAAGATTCTACG
ACTGACTTCAATATCTATTTCAATGTCAGTTATCGTGGTTATAAATATTG
AACagtattttatgattttgaaacCACTTCGTCATGACTTTAAAAGGTGT
ACTGGGAAAGTTTTGCTGATATTGGCATCAATGTGGATTGTGTTTTTTGC
TGTCGTGGCTTCTGCTTATCTACTCTTCAGATCGCAACTAATTGGAATCA
AAACTGTTTTTGGTATCGCcgtgtttttaatttttactgAAATGTGGTAC
TTTCATTATAAACTGAACCGTGAATTTAAACTTCTCACGCTACGATGGAA
GAACTTTGgacaaatcaaaaataattcgTTTCGAATACGTGCAAATCGAA
TGACGACTTCTGTCTTGATTGGAATAGGTGTTTGTTTTATTCCGTTAACT
TTAGTTcagatttttgaaagatttttcacTGGTAGCGATATCTATCAATT
GCTTATGCTAATAACAATGTTCATCACATCATCCAATACCTTAATAGACC
CTTTAATTTACTGCATTCGACTGAAGTCTGTTCGTAAATTTTTATTCAAC
TTTCTAAAATCTCATTcccaacaaaaagaaagaagagaaaaggaCAATAA
CTTGgatgtaaaatggcaaaaaCAGTCAAATCGAGTCCGCTTCGTACCGc
aaatacaaaagaaaacacCTCCAGTTAAAACTATTGATAACGATTTAGCA
GTAGAAAGTGCATCAGTTTTTTCTATATTCAATGAACCNATTATAAACTG
AACCGTGAATTTAAACTTCTCACGCTACGATGGAAGAACTTTGgacaaat
caaaaataattcgTTTCGAATACGTGCAAATCGAATGACGACTTCTGTCT
TGATTGGAATAGGTGTTTGTTTTATTCCGTTAACTTTAGTTcagattttt
gaaagatttttcacTGGTAGCGATATCTATCAATTGCTTATGCTAATAAC
AATGTTCATCACATCATCCAATACCTTAATAGACCCTTTAATTTACTGCA
TTCGACTGAAATCTGTTCGTAAATTTTTATTCAACTTTCTAAAATCTCAT
tccaaacaaaaagaaagaagagaaaaggaCAATAACTTGgatgtaaaatg
gcaaaaaCGGTCAAATCGAGTCCGCTTCGTACCGcaaatacaaaagaaaa
cacCTCCAGTTAAAACTATTGATAAAGATTTAGTATTAGAAAGTGCATCA
GTTTTTTCTATATTCAATGAACCTTTCCCTGTTCTAACGAGCAAAAAAGC
TTTGGATGTAAACAAACAACTAACAAAAGAAGATAGTGAGGGCAGTACCG
CCTCAAACACATTACCATCCGTTGAAAACAGGAAAGGACTAGAACACTAT
TTGACTTCAGAAAATCTCAACGGACCGAACATTATTCTCGTAAAAGCCTT
TGACGTAAGAACAAAACCGCCGAAAAGAAATATTCATCATCATTACAATC
CAACTGACCAATGACATTGCAGATATTTTTATTATGAAGGAACAATGCTC
GAGTAGTTATAGAATCTCATGGTCAAAAACCACGGATGACTGGTTCGAAT
CAATGTTTTACTGTTAATATTTTATTGATAGTCTAATTCACTGTAAGTGC
TATTAGCCCGGGGAGGTACTTCCATtttcgaccgacgggggtgtgttgct
gaagtttgaaaaatggaccctacgtgggacttgtcttttgaaaaaagtga
ccctgaatgggactgaaattccaaaattatctaaaaaatttccatatttt
tatccaaattcccccaaaaaggtaccctacgggggactgatttttctatt
ttagtgtttttgcgactctacctgggactcatggaggtgaaaaaaggtac
cctgaccagcggcacctCTCCGTACCGGGGCTGTTAGtctaattcaaatt
ttagttgatTGTCTAATGAATTATATTAATTTCGAAATATTAATGCTGAT
CagacaaatttttttattctacTGAAAGTTACACTTAACTGTTTTGTATG
CGCAGATTTCAGCTGAGgcaaataaacaaagaatggTGCAAGATTGTATa
cacagtcaactctctctaattcgaacctctattattcgaatctttctgta
atttgaagTAAAATTTTGGTTCCCTCGGctgaaaagtggtttaaattact
aTCTGTAAtacaaatctttctataattcgaagttTTTGGTCtcatgaaga
tcgaattaaagagaatTAAGCGtcgtaaaaaaattatcaaaaagcaaagt
tcagccaaaagtagactctggTCTAAAATATGGgtaaaaattgagatttt
cttttcatatcaCGACATTCGATGTTTATTTATATCATAGTACGTATGCA
GTGAAGGATGGAgagagggtttaaaaaagcTTCCGTCTCTTGTTTGAATG
ActtcatttctattgttctctgtgGGTATTCGTTCACATATTTGAGAAGT
TTTTGCCTACGTAATATATGGATTATCCTTCTAGAAACTATGCAAAcatt
atatttcttttattataGGATCAATATGGCGTATGTCAGGAAGTTGACAG
CGCTGGGATTTCACAATTCTCAAACATTTTCATTGCAAGGTAAATATCCC
ATGTTACAGTACCTCAacatatttttctcttcttatTGTGCCACTTCTTT
TtatatttccagggggtaactCGAGCAAACTTTGCTCTCTTTTTCCTgca
aaaaaatgaagcaatttcacacaaagtccacaAATCCCAACTTTTAGGca
cttttttgcccaaattttcctaaaaattattttttcgaaaatcgagctcc
atcagattttaaagattaccatttttacatcattgtgcaaagaatcagaa
aaaataataagGAAATCGCGAGAAATGCGagaaatccgatttttacggcc
aaaaaagattttccggaaaaaaaacTACtacagccactttttagagaacc
ttgccctttctctttatgcaaaaaatctcAGAAAATATAATGAGcaaatc
ccgagaaaagctggtaacagacaaacggacggacggacggacgggcTGAT
CTTATCTTTAAAGAAACAGTTATCTTTACAGGAAAAAAAGGACTGTTTTT
TATTATGCCCAAACTTACCatggtttgattttcaaaaaaatcatttccat
tTTATTTGGGGCTTGCTTACCTCTAAAAGATCGGAAAACCAGCGTAGAAC
AATtttcatcatattttcaagCTTACGTACTCTATGATATGCTGTTATCT
CTCCTTTTTCGTTCGAACTTTTTCATATTCGTCCAGCATATTTCTGACTC
CCTATCTCAGGTCTGCTCATGTAGGTCCATGTTGCTTATAGTcctttgtt
tatctttgcacTTATTCTATTACCCCCAGGTGACTTATAATCACCCCTTT
GttaattattttgatgtttattCCAACCCTCATGGACCTTATTAGGACGT
ATTTTGGCCTTACAAATCCCCCTCTCCCGTTTAGGCACCCGAGATTAAGT
ATTTTTACATCCCCTTCTCAAAAAGCCCAGTGGAAAGAAGGaatgggcca
aaatatcgtccccagtggaaaattatgctGTGAGAAGGGAGTCCATTTTT
GGATAATTTAGAGAAATTATTTATCCTTATCTATGTGGCTCTCGTTTTAA
TCAAAACTTATCGCCGTTTCTTTTAACCTTCTCTTTTGCTCAATATATAA
TCCCGTCCACTATGTATCATCTGAATGAGTCACTAAGAACATTGCAGTGC
AAGCCTTTTCTTTAcgccatcaaaacaaagaaaaataaaccagccgaggc
tggaaggtcagccaatagagcttagctagatagctttaataagtgggtta
acagatgtaatagatgtactgaaacagagtagactaaaaatgttgaataa
tgtacaaaatgtgaaacatttgataacttgatttaaaattatttaaaaca
aacctgagagctcctccaacccccccccccccccNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NCCCCgagaagctcaaagtatacttctctttagcattgtagcactgtttc
tatgacatcaaacaattaagctatagttcattactataaaataaaagaga
aacgtagtgtaattaaacttttgttaatttcattccagtcagtcAGTTAT
TATGATACATtctttctgttggatgtagacaatatccatatctgaccaaa
gtgttatactagaaataaataagaaaattgccaaaacgtcagaaccaaaa
taaagatatccatcaaatatacatagaaactgtactttttgttttacttg
ataaaactccaataacactttaaattaaactaacaagctacaaactttaa
gtcacaaagcgcaaactctagaaaaacacaatttgcatcaaaaactttgc
aaaacgtatatagttcatatttataacatttcaacaggaactgtattttg
gtagacttggtcaaattacagaaaccatttgtcagttgtctgcaaggcca
atgaggtacgtaaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAA
Ttaagtcaaagccaaaatttggcaaggtcagaaaaacataatttgcatcc
agtctgcgtaaataaattttgtagtttagtaccgtcaagttacacagcTC
ATTTTTCCCCTGTTTTCCTTcaaactcccttttgattggtttaTGAAATT
GAGCGATCGccttaccgccttggcggaataaacacacacaaataataaat
aaattcaacagggcagcggagtggcaattaatttcaactgggagtcctcc
agcgttttttaaactttaaaacaatgttaaatgaagaccagatggatctg
tttgttatgactgtccaagttgtaacttgacggtataattcattacaaat
tctagaaaccatttttctgcaagtctgataacagatatatgtataaactg
ttatcgccattcattccattccatcattcagtcaaaacgtgcgccaaggt
tagaaaaggttagaaaaacactatctgcgtccggaactgcgtgaaaaata
gtttgatcaatttcaacaagaactgtatatattaattaatataattgatc
aaattccaaagaccatttgtcataattttgcaggTCCAATAATAGGacat
gtgatgtcatcatttggttcccgtcatctgaccgaccctgatttacggtc
agcaggtagagttggagagtcggaaagcttttccgctgctttgctggatt
tccactgttgacctctgcacgctctgtgtttacaagttttcaaatggaAG
TAGCGAGctgcatgctaatggagagtaaaccgaaaaccagtttatccacg
gtttctcaattttttaattcggatcagtccaccacggattccctttcaac
aagatgtagctgcttcttaacagaaaaatattttcgaccgaccgaccctg
actttttaaagtagaaatgacgggaaccaaacaattttttgcgattcgcc
tatatcaaacacgtccaagtccaaaaaagcacgattgcatccagtcttta
tcaaatttagacagtagctgcactgttgtaaactttatcaaattccaata
acattataacaccatcaatcccccctAGAGgcgaacaagaaaaatatgtt
tttattgcaaaaactaataaaaagcagcaataaaaagtatcagaaaattc
aacataaacaaaaacttgagcaaacggcttgaaagcttcaaaagatctag
aaaaagaatccccttgatgaaaatcatgtgtttgatttgccgagttaaaa
aaataaatgacagaaattgaagcttgcaaatgatttacactggaaatact
ttggtacaacactgacttttATCACATCTGACCGCATCTGACTATcactt
gagccgccatcttgaaacaccacattatgcattatgatctgtaaaaacaa
cgcacgctaaaagtacccaaaaagttaacccgatcggaagaaagtttaga
aatcaaagtgagatcgggaaatcggattttttttttgccgtcttatgatg
atggtgatggaagaaaattttacctatttgaatgctcagcttaggctgac
caaaaacTATATTGGAATGAACTTGATGAACTAAACTATTGCTATATACT
GTTTTTCCTACTAGACGAGAAGCAAGTTCGTAACTTGGTCGTATGGTTAG
AAGATCAAAAGATTCGCTTTTACGATACAAAAGATCGAGAGCCTTTGCGA
GATGTGGAGAGTCAATATTGGATTGGTGCTCTGAAAAAGGTAAGTAATGC
ATTTTCTATACCGTATTTTATATGATTATAAGAATTTTTGAAGCGTTTAG
GGTGTTATCAACTATTTAGCAGTTGggtattttatatttatttaaggTAA
TTCCGGAGGGGTGGCACTCAAGGTGGGCGACCATAGGTGTGTCCTTAAGG
GTGCGTTTTTAGGCTTCCAACATAAAGTgggcataaactttcgcgaatcg
ttggataataatgagaattttcgaaaattgccttaaaattgaaaaaatat
tccttaaatccaATAAAGACGGTTActcttcgactttaaaaaggcattaa
aggaTAAAAAGTATGCTGAAAATTAAGTCTAATTTAATTATCTCTTAGAT
ATTCATTAGAGTTAAgcctcagattgttcttaatttgttcttaggttttg
gacatttttcagccttgtgttcttatgaAACTGTTCTTATATTATATAAG
ATCAAGAAAGTTTCTCGATAAGAAATAGTAAAAGCGTGTGGCGTtgaaga
atgaaaaattaactttttatcTTTTCGCCTCCTGATTTTGATTTCAGTTT
TACAATTATTTTTATACCTAAATACAGTATTTCATTAAAAGATATGTATT
GAAAATGTTTATATGCTGTTtatctttttacattttttttcagtATTTGA
GTGATCTGAAATGTCCTGTTGacaatttgaatgaaaaaggtGTCATTGTT
AATTGGTTGCTAAGCTACGCTGTCCATTTAGAATTCGAAGAAAATGGTAA
CTATCAtgtaacttttttgagaggggaCCGTGAAATtgaccttttcgacc
gtagtcgcgcagtCAGGCGCgtccacttaattatttaattatctccctaa
actcaatccaatccttttttgacacatttttctattgtctatagttgcga
aaaaaggactggggcggttttagtgggataaagtgggcaaaaaaatgccc
acgcggcaattggcggctacggtcgaaaaggcgtATTAGACCTGGCAAGA
TTCATAAGAAACTTactctatttataaaaataacTTGAAGACTCAGGGTG
TAATCACTCAGCAATGGATTCAAAACGAGGCTGTCGTTGTACTTAGAAAA
TGATAtatgaaaattgaaatctaaaTCACGCCGTCAAGCAAACCGTTGCT
GGGGCCTTGATAATATCCGATTACATATTTGGCTTGGTAATTCAGGGCAT
ATCTAGTAGGTTTTTTTGCTAACCCTTAAGAATTTGTTAATTATTTTCAA
GCATCAAAGTACAACGATGAATCAACTAACCGTCCGATATCCAAAGTGGA
CACGAACTCATGGCTCCATTCAATCGATGGTTcgtatttacttttttttt
tagatttgaagTTCTTCTTCTTTTTACGTTATCCGACAGTATGGATATCA
GTTTGACCAAATTAAAGCTTCTCAGTGTTTCTTGACATACCTAGCCAATA
CTCTCGTTGGGTTTTTTAATGGAGCTGGGATACCATTCTTTCTCCTAAAT
TGTGATTCGTCTAGCTTACTTGACTACATGTtcccaaatttcaaaattta
catattttagCAGAAGAGAAAGAAAGCCCTTGCGCGATCATGAAAAGGTT
GGAAACAGAAATTTTGAAGCTTTACAATTAGGTTTGGTAGCCATCAACCC
TGATTAACAAAATAATGGGAGCTTTTTCTCGGCTAAACTGTCTATAATTG
GTCCCCTTTTCTTCTCTATATAGCGAACGATGGTGACTTGATCAAAGGGA
TTGAGGTTTTGAGGCAAGCGTTACGAATACCAAACCACCCAAATCACATA
ACTGTGTTACAAGCTGTTTCCAAACTGATTCAAGAACGTCTAGCTTCGAA
GCATATGAAAACAAATACCCCAAAACAGGTATGGCAttacaaaagtttta
aaatcacTCGACACATCTTTATTTTCAAACCCCGTAAATTTATCAGGGCT
AGGAGGCGCTAAGGCTTTTCAAAATTCCCTGAGCAAAAACTCGATAGAGC
TAGGAATCTtagctggcacaaaacgttatttctacgtttatctaacgttc
ataacgtccatataacgttagatgaacgctgaaacaacgttgtgtgccag
gaGTGATTACTTATCTACTGCAGCTAATCTCCACATTTTCACAGTGTGTT
GGAATCCACCTTCTAACAGTAACAAAAAGGTTCATTGTCATAGCAATTGA
ATCAAGTTTATACGCACAAAAAGCCACTTCAATTCAAAGCCTTACTTCtg
caatataattttttaacccttgagttttaacattaggaTCACAAGGCTCA
AAATCTTCCCAATAAATCAATAAGGCTAtcaatatagcctggaagccact
aaACTTCCCAAATCAAAACATCTGATAAAATAAAGTTTAAATGGTGAGTT
CGCCATGCTCACCCGAACATATAATTCTGACAGACGTTAACATTCCCAAC
ATATCTCAATAATGTATCAACAAATGTCGGACTTTAATATAAAAAACTGT
TTTCCCTTCACTGCAATAGAAGAAAGGGCTATCTTTCCAACCCTAACCCT
TAagttcaattttgaaaatttatgatcCTTACTTTACAGAAAATCATAGC
GAGAGGGGGGTTAGTTGGGCAAAAATTTGTGCTGGGAGTGGATTGAAGGG
TCTTTCCAAGTCTttaaaaaggttacaaaaacaacaataagattatttta
aggGTTGTTGGAATTTTCACCTTTTCTGTCACTTTAACGGTAAGGAAAcc
atgaaaagtaaaaaaaagttgtcTTTCTAAGGGCAACTTTTCCTATGATT
TTATTTCTCTAAAGGCAACCTTTAGCAAAActttagtctctctaaggaaa
attatggaatttttttgaaaatctggtCCGCACATATCTAACATTCTTTA
ACTCTAATACTTCCCCAACGTTTTTGGTGCTTTTTCTCTCCTATTCTGAG
TTTTTGAGTCTCTCCGGGAACCTCCCTtccttttttatcatttcataatt
ttcttcatCTCAATGCTCGCTTTCGTTTCCAGAAAACAACATACGTTGAC
CTTGATGAGATTCCGCTTGGCTTCAATATCGACGGTAAGGGATCTTTCCT
TTTAAAAAATACACCGAGAATAGACCTTCTCAAGAGACATTTCAGCTTCA
CTCGAAATGATTAATTagtatagacctttttataaattacgtcacgaaca
tcgcttgcctcgtattcaaacgaTTTCCATGGAAattatatcccttgaga
cattaaatttttttatgaatagaaagtagttgcaataaaatctgctggga
gttaatcaccatggcaataatttcaaaacgaggcaagtgatgttcgtgac
gtaatttatgaaaaggtctattttgttcattttgttcATCTCATATGAAT
GTTAAAAGTAGCTCCTTAGTAGAGCCATCCAAAGAGTTGGCGAAAAAAAT
GTCTCAGACCCGGAATGATGCCTAACCGTAAACTTAGTAACCGAATTTGT
CTTGCGAGGCAAGCTTGGTACAGGCTATCTTAGCTGTTTGACGTCAAATG
AGTGTTGGGGGGGGTCCGGATAAAAAGGAGGTTAGAACAGAATGGAAATT
TCGATTCGATCTTTTTGCAGATTCAGCAGTCCGTGAAGCAGCCAAGATTC
TCCGACTCCTACAAATTCATCAACTGCGAGATTTACAAActaaaatcaac
caatcaatcgtCACTGTCCAAATGTTAAGCGCAAACCCAAAGACGGATCA
ATCGCTTGGTAAAGTTGGCCGCTGATAAACATGGTTGCAATCTCTTTGAG
TATTTTATAGGTATTCGCTTATTGGTAGGGTTTTTTTTCGTGAAAGTGAT
TTTATATAGTGGTTATCCATCGTTTGTTGTGTTttatatttaaatttaaa
agtttataaaaacaatttaaattataaacaaaaccaaaacatACAAGAAC
GATTAAATTTTTATAGTGCACTGGGTGactcacaaaaaaaattttg

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_013274	XLOC_013274	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000457	supercontig	sc0000457:225926..238071 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.55928	3.76945	8.27596	12.5357	5.8826	1.82401	3.25791	6.29696	0	0	1.72199e-05	0	0	0	0	3.20975e-09	0	0	0	0	0	0	7.84792	8.40535	7.49547	4.51064	0	0.000189047	6.61948e-09	2.46249

Blast

[Close]

BLAST of TCONS_00023632 vs. Swiss-Prot (Human)
Match: CN166 (UPF0568 protein C14orf166 OS=Homo sapiens GN=C14orf166 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.710e-58
Identity = 102/244 (41.80%), Postives = 150/244 (61.48%), Query Frame = 1

Query:   61 YVRKLTALGFHNSQTFSLQDEKQVRNLVVWLEDQKIRFYDTKDREPLRDVESQYWIGALKKYLSDLKCPVDNLNEKGVIVNWLLSYAVHLEFEENASKYND---ESTNRPISKVDTNSWLHSIDANDGDLIKGIEVLRQALRIPNHPNHITVLQAVSKLIQERLASKHMKTNTPKQKTTYVDLDEIPLGFNIDDSAVREAAKILRLLQIHQLRDLQTKINQSIVTVQMLSANPKTDQSLGKVGR 783
            + RKLTAL +HN   F+ +DE + RN +VWLEDQKIR Y  +DR  LR++ S  W    +KYL D+ CP   + ++   ++WLL  AV LE+ +NA KY D   +++    +       L ++D N+ D   G+  L   L+I  H +++ +L+A+  L+QERL    +      ++   V LD+  LGF+  D+ + EAA+ILRLL I +LR+LQTKIN++IV VQ + A+PKTD  LGKVGR
Sbjct:    2 FRRKLTALDYHNPAGFNCKDETEFRNFIVWLEDQKIRHYKIEDRGNLRNIHSSDWPKFFEKYLRDVNCPF-KIQDRQEAIDWLLGLAVRLEYGDNAEKYKDLVPDNSKTADNATKNAEPLINLDVNNPDFKAGVMALANLLQIQRHDDYLVMLKAIRILVQERLTQDAVAKANQTKEGLPVALDKHILGFDTGDAVLNEAAQILRLLHIEELRELQTKINEAIVAVQAIIADPKTDHRLGKVGR 244

The following BLAST results are available for this feature:

BLAST of TCONS_00023632 vs. Swiss-Prot (Human)

BLAST of TCONS_00023632 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CN166	1.710e-58	41.80	UPF0568 protein C14orf166 OS=Homo sapiens GN=C14or...	[more]

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TCONS_00023632 (transcript) - C. hemisphaerica