|
Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00023644 ID=TCONS_00023644|Name=TCONS_00023644|organism=Clytia hemisphaerica|type=transcript|length=4798bpRun BLAST on NCBI transcript from alignment at sc0000457:83756..113086- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00023644 ID=TCONS_00023644|Name=TCONS_00023644|organism=Clytia hemisphaerica|type=transcript|length=29331bp|location=Sequence derived from alignment at sc0000457:83756..113086- (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2
Blast
BLAST of TCONS_00023644 vs. Swiss-Prot (Human)
Match: NOTC2 (Neurogenic locus notch homolog protein 2 OS=Homo sapiens GN=NOTCH2 PE=1 SV=3) HSP 1 Score: 468.774 bits (1205), Expect = 9.608e-136 Identity = 328/942 (34.82%), Postives = 469/942 (49.79%), Query Frame = 3
Query: 891 CIQGWAGPNCLDAV--CHTNCQLKHASCSQP---GDCDCDDGWMDKFDTPKSCSQCRKKSGCKNGFCKDGND---CHCNSEWVGDLCDKDNNTCRSSPCLNGATCINDGLDRYKCQCKPGFTGMQCQTEIDLCVGSPCVNGVCNNFGTRYTCTCFLGYSGRNCTHNIDDCSPDPCKNGARCEDGIASYKCHCLNGYKGKDCDTNIDDCVNNKCQNGAQCIDGVANYTCGCRLGFDGMFCENNINDCKSVPCQNGGTCIDGINSFECKCLPGRTGRRXXXXXXXXXXXXXXXGGTCGDGVNEYNCTCLAGFNGTNCEIDINECLLQDNICNNHGKCKDGIDSYQCTCYPGYNGTNCQHNIDECASNPC-QHGKCTDGINDFSCQCDVGWQGKMCDQNIDDCIVECKDTTKPKPCFEPRCQHGSKCTDKVN--GFACNCTEGYEGSTCDVRIDYCGRWTPCQNEAQCRNQLETYLCECKPGYTDKNCSTNIDECESGPCLNSGTCTDGVNKFSCQCPEGYDGDRCEENINNCDPRDPRN----SNDLPEGAVLTAWGF----------------CGRNGQCVDGVNAFSCNCSVGYHGQYCQYDTDECEDKPCLNGGACHQNPSSPGYYCTCAPGYDGKDCQNNIDECTTPNEKGVRGNETCCDGANTCRDAVNGFTCQCPTGKVGIDCCSTLSWCSNNDTCHKNGKCSDTISQTT----NQPTGFTCQCDQGWTGDRCQTDINECLNAKTCRSGAKCINSPGNFTCICPAGKTGRNCDVEIDDCIDAKCQNGKQCVDGDNRFHCNCSGPGFTRPLCED-VNECEDNP-CPSDRRCVNTVGNYECHCLEGWTGINCQTSVDDCVDNECKMSHTKECIDKHLSYECQCLDRYEGKHCVERKALEPGANATKDECGCLYG---ACMFNEDRVQICKCDPGFRGGKC 3596
C++G+AGP C + CH++ A+C C C G+ ++C+ NG C D + C C + G +C D + C S+PCLNGA CI D + Y+CQC GFTG+ C+ ID C PC +G C + YTC C GY G C+ ID+C PC N RC D + Y+C+C G G +C+ N DDC +N C +G C+DG+ Y+C C GF G C +I++C S PC+ G TCI+G+N F C C P + + + G C G++ Y C C AG+ G NCE+D NECL N C N G C + ++ Y+CTC G+ G NCQ NIDECASNPC G C D I+ ++C C + + GK C + C P PC ++ + C + N + C C G++G C + ID C PC N C N +Y+CEC PG++ +C +ID+C + PC N G+C DGVN FSC C G+ GD+C+ ++N C +N S+ + GF C G CVDG+N+FSC C VG+ G +C ++ +EC PCLN G C + Y C+C GY GK+CQ ++ C+ + C TC C CP+G G C + S + + G + + Q + N CQC G+TG C+ ++EC + C+ GA C + G + C C G G NC+ E+D+C + CQNG C+D N F C+C PG LCE+ +++C P C + +C++ +G Y C CL G+ G C+ +++C+ N C + +CI Y C C + G+HC + P + CL G A N IC+C PGF G +C
Sbjct: 444 CLKGYAGPRCEMDINECHSDPCQNDATCLDKIGGFTCLCMPGF-KGVHCELEINECQSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAKCI-DHPNGYECQCATGFTGVLCEENIDNCDPDPCHHGQCQDGIDSYTCICNPGYMGAICSDQIDECYSSPCLNDGRCIDLVNGYQCNCQPGTSGVNCEINFDDCASNPCIHGI-CMDGINRYSCVCSPGFTGQRCNIDIDECASNPCRKGATCINGVNGFRCIC-PEGPHHPSCYSQVNECLSNPCIHGNCTGGLSGYKCLCDAGWVGINCEVDKNECL--SNPCQNGGTCDNLVNGYRCTCKKGFKGYNCQVNIDECASNPCLNQGTCFDDISGYTCHCVLPYTGKNCQTVLAPC--------SPNPC-----ENAAVCKESPNFESYTCLCAPGWQGQRCTIDIDECIS-KPCMNHGLCHNTQGSYMCECPPGFSGMDCEEDIDDCLANPCQNGGSCMDGVNTFSCLCLPGFTGDKCQTDMNECLSEPCKNGGTCSDYVNSYTCKCQAGFDGVHCENNINECTESSCFNGGTCVDGINSFSCLCPVGFTGSFCLHEINECSSHPCLNEGTCVDGLGT--YRCSCPLGYTGKNCQTLVNLCS----------RSPCKNKGTCVQKKAESQCLCPSGWAGAYC--DVPNVSCDIAASRRGVLVEHLCQHSGVCINAGNTHYCQCPLGYTGSYCEEQLDECA-SNPCQHGATCSDFIGGYRCECVPGYQGVNCEYEVDECQNQPCQNGGTCIDLVNHFKCSCP-PGTRGLLCEENIDDCARGPHCLNGGQCMDRIGGYSCRCLPGFAGERCEGDINECLSNPCSSEGSLDCIQLTNDYLCVCRSAFTGRHCETFVDVCP-------QMPCLNGGTCAVASNMPDGFICRCPPGFSGARC 1342 HSP 2 Score: 466.077 bits (1198), Expect = 8.038e-135 Identity = 317/896 (35.38%), Postives = 440/896 (49.11%), Query Frame = 3
Query: 1092 CHCNSEWVGDLCDKDNNTCRSSPCLNGATCINDGLDRYKCQCKPGFTGMQCQTEIDLCVGSPCVN-GVCNNFGTRYTCTCFLGYSGRNCTHNIDDCSPDPCKNGARCEDGIASYKCHCLNGYKGKDCDTNIDDCVNNKCQNGAQCIDGVANYTCGCRLGFDGMFCENNINDCKSVPCQNGGTCIDGINSFECKCLPGRTGRRXXXXXXXXXXXXXXXGGTCGDGVNEYNCTCLAGFNGTNCEIDINECLLQDNICNNHGKCKDGIDSYQCTCYPGYNGTNCQHNIDECASNPCQHGKCTDGINDFSCQCDVGWQGKMCDQNIDDCIVECKDTTKPKPCFEPRCQHGSKCTDKVNGFACNCTEGYEGSTCDVRIDYCGR-------------------------------------WTPCQNEAQCRNQ--LETYLCECKPGYTDKNCSTNIDECESGPCLNSGTCTDGVNKFSCQCPEGYDGDRCEENINNCDPRDPRNSNDLPEGAVLTAWGFCGRNGQCVDGVNAFSCNCSVGYHGQYCQYDTDECEDKPCLNGGACHQNPSSPGYYCTCAPGYDGKDCQNNIDECTTPNEKGVRGNETCCDGANTCRDAVNGFTCQCPTGKVGIDCCSTLSWCSNNDTCHKNGKCSDTISQTTNQPTGFTCQCDQGWTGDRCQTDINECLNAKTCRSGAKCINSPGNFTCICPAGKTGRNCDVEIDDC----------IDAKCQNGKQCVDGDNRFHCNCSGPGFTRPLCED-VNECEDNPCPSDRRCVNTVGNYECHCLEGWTGINCQTSVDDCVDNECKMSHTKECIDKHLSYECQCLDRYEGKHCVERKALEPGANATKDECG----CLYGACMFNEDRVQICKCDPGFRGGKCLAPTNE 3614
C C + G C+ D N C S PC N ATC+ D + + C C PGF G+ C+ EI+ C +PCVN G C + R+ C C G++G C +IDDCS PC NGA+C D Y+C C G+ G C+ NID+C + C +G QC DG+ +YTC C G+ G C + I++C S PC N G CID +N ++C C PG +G C N DDC NPC +G C DG+N Y+C C GF G C IDI+EC N C C +G++ ++C C G + +C ++EC SNPC HG CT G++ + C CD GW G C+ + ++C+ CQ+G C + VNG+ C C +G++G C V ID C PC+N A C+ E+Y C C PG+ + C+ +IDEC S PC+N G C + + C+CP G+ G CEE+I++C C G C+DGVN FSC C G+ G CQ D +EC +PC NGG C +S Y C C G+DG C+NNI+ECT E+ C TC D +N F+C CP G G C ++ CS++ C G C D + + C C G+TG CQT +N C + C++ C+ C+CP+G G CDV C ++ CQ+ C++ N +C C G+T CE+ ++EC NPC C + +G Y C C+ G+ G+NC+ VD+C + C+ T CID ++C C G C E D+C CL G + C+C PGF G +C NE
Sbjct: 442 CECLKGYAGPRCEMDINECHSDPCQNDATCL-DKIGGFTCLCMPGFKGVHCELEINECQSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAKCIDHPNGYECQCATGFTGVLCEENIDNCDPDPCHHG-QCQDGIDSYTCICNPGYMGAICSDQIDECYSSPCLNDGRCIDLVNGYQCNCQPGTSGVNCEINFDDCASNPCIHG-ICMDGINRYSCVCSPGFTGQRCNIDIDEC--ASNPCRKGATCINGVNGFRCICPEGPHHPSCYSQVNECLSNPCIHGNCTGGLSGYKCLCDAGWVGINCEVDKNECLSN-------------PCQNGGTCDNLVNGYRCTCKKGFKGYNCQVNIDECASNPCLNQGTCFDDISGYTCHCVLPYTGKNCQTVLAPCSPNPCENAAVCKESPNFESYTCLCAPGWQGQRCTIDIDECISKPCMNHGLCHNTQGSYMCECPPGFSGMDCEEDIDDC------------------LANPCQNGGSCMDGVNTFSCLCLPGFTGDKCQTDMNECLSEPCKNGGTCSDYVNS--YTCKCQAGFDGVHCENNINECT----------ESSCFNGGTCVDGINSFSCLCPVGFTGSFCLHEINECSSH-PCLNEGTCVDGLGT-------YRCSCPLGYTGKNCQTLVNLC-SRSPCKNKGTCVQKKAESQCLCPSGWAGAYCDVPNVSCDIAASRRGVLVEHLCQHSGVCINAGNTHYCQCPL-GYTGSYCEEQLDECASNPCQHGATCSDFIGGYRCECVPGYQGVNCEYEVDECQNQPCQNGGT--CIDLVNHFKCSCPPGTRGLLCEENI----------DDCARGPHCLNGGQCMDRIGGYSCRCLPGFAGERCEGDINE 1267 HSP 3 Score: 452.21 bits (1162), Expect = 3.210e-130 Identity = 308/854 (36.07%), Postives = 437/854 (51.17%), Query Frame = 3
Query: 1092 CHCNSEWVGDLCDKDNNTCRSSPCLNGATCINDGLD-RYKCQCKPGFTGMQCQTEIDLCVGS---PCVN-GVCNNFGTRYTCTCFLGYSGRNCTHNIDDCSPDPCKNGARCEDGIASYKCHCLNGYKGKDCDTNIDDCVNNKCQNGAQCIDGVANYTCGCRLGFDGMFCENNINDCKSVPCQNGGTCIDGINSFECKCLPGRTGRRXXXXXXXXXXXXXXXGGTCGDGVNEYNCTCLAGFNGTNCEIDINECLLQDNICNNHGKCKDGIDSYQCTCYPGYNGTNCQHNIDECASNPCQHGKCTDGINDFSCQCDVGWQGKMCDQNIDDCIVECKDTTKPKPCFEPRCQHGSKCTDKVNGFACNCTEGYEGSTCDVRIDYCGRWTPCQNEAQCRNQLETYLCECKPGYTDKNCSTNIDECESGPCLNSGTCTDGVNKFSCQCPEGYDGDRCEENINNCDPRDPRNSNDLPEGAVLTAWGFCGRNGQCVDGVNAFSCNCSVGYHGQYCQYDTDECEDKPCLNGGACHQNPSSPGYYCTCAPGYDGKDCQNNIDECTTPNEKGVRGNETCCDGANTCRDAVNGFTCQCPTGKVGIDCCSTLSWCSNNDTCHKNGKCSDTISQTTNQPTGFTCQCDQGWTGDRCQTDINECLNAKTCRSGAKCINSPGNFTCICPAGKTGRNCDVEIDDCIDAKCQNGKQCVDGDNRFHCNCSGPGFTRPLC-EDVNECEDNPCPSDRRCVNTVGNYECHCLEGWTGINCQTSVDDCVDNECKMSHTKECIDKHLSYECQCLDRYEGKHCVERKA---LEPGANATKDECGCLYGACMFNEDRVQICKCDPGFRGGKCLAPTNEASTD 3626
C C G LC D+ C S+PC GA C + L+ +Y C C G+ G C ++D C + PC + G C N + C C GY+G C +I++C DPC+N A C D I + C C+ G+KG C+ I++C +N C N QC+D V + C C GF G C+ +I+DC S PC NG CID N +EC+C G TG C +N D+CDP+PC + G C DG++ Y C C G+ G C I+EC + C N G+C D ++ YQC C PG +G NC+ N D+CASNPC HG C DGIN +SC C G+ G+ C+ +ID+C + P C+ G+ C + VNGF C C EG +C +++ C PC + C L Y C C G+ NC + +EC S PC N GTC + VN + C C +G+ G C+ NI+ C A C G C D ++ ++C+C + Y G+ CQ C PC N C ++P+ Y C CAPG+ G+ C +IDEC + C C + + C+CP G G+DC + C N C G C D ++ F+C C G+TGD+CQTD+NECL ++ C++G C + ++TC C AG G +C+ I++C ++ C NG CVDG N F C C GFT C ++NEC +PC ++ CV+ +G Y C C G+TG NCQT V+ C + CK T C+ K +C C + G +C + E C + N C+C G+ G C +E +++
Sbjct: 362 CMCPEGKAGLLCHLDD-ACISNPCHKGALCDTNPLNGQYICTCPQGYKGADCTEDVDECAMANSNPCEHAGKCVNTDGAFHCECLKGYAGPRCEMDINECHSDPCQNDATCLDKIGGFTCLCMPGFKGVHCELEINECQSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAKCIDHPNGYECQCATGFTGVLCEENIDNCDPDPCHH-GQCQDGIDSYTCICNPGYMGAICSDQIDECY--SSPCLNDGRCIDLVNGYQCNCQPGTSGVNCEINFDDCASNPCIHGICMDGINRYSCVCSPGFTGQRCNIDIDEC------ASNP-------CRKGATCINGVNGFRCICPEGPHHPSCYSQVNEC-LSNPCIH-GNCTGGLSGYKCLCDAGWVGINCEVDKNECLSNPCQNGGTCDNLVNGYRCTCKKGFKGYNCQVNIDEC------------------ASNPCLNQGTCFDDISGYTCHCVLPYTGKNCQTVLAPCSPNPCENAAVCKESPNFESYTCLCAPGWQGQRCTIDIDECISKP----------CMNHGLCHNTQGSYMCECPPGFSGMDCEEDIDDCLAN-PCQNGGSCMDGVNT-------FSCLCLPGFTGDKCQTDMNECL-SEPCKNGGTCSDYVNSYTCKCQAGFDGVHCENNINECTESSCFNGGTCVDGINSFSCLCPV-GFTGSFCLHEINECSSHPCLNEGTCVDGLGTYRCSCPLGYTGKNCQTLVNLCSRSPCKNKGT--CVQKKAESQCLCPSGWAGAYCDVPNVSCDIAASRRGVLVEHLCQHSGVCINAGNTHYCQCPLGYTGSYCEEQLDECASN 1156 HSP 4 Score: 414.461 bits (1064), Expect = 5.579e-118 Identity = 320/930 (34.41%), Postives = 449/930 (48.28%), Query Frame = 3
Query: 984 CDCDDGWMDKFDTPKSCSQCRKKSGCKNG-----FCKDGNDCHCNSEWVGDLCDKDNNTCRSSPCLNGATCINDGLDRYKCQCKPGFTGMQCQTEIDLC-VGSPCVNG-VCNNFGTRYTCTCFLGYSGRNCTHNIDDCSPDPCKNGARC-EDGIASYKCHCLNGYKGKDCDTNIDDCVNNKCQNGAQCIDGVANYTCGCRLGFDGMFCENNINDCKSVP--CQNGGTCIDGINSFECKCLPGRTGRRXXXXXXXXXXXXXXXGGTCGDGVNEYNCTCLAGFNGTNCEIDINECLLQDNICNNHGKCKDGI--DSYQCTCYPGYNGTNCQHNIDECA---SNPCQH-GKCTDGINDFSCQCDVGWQGKMCDQNIDDCIVECKDTTKPKPCFEPRCQHGSKCTDKVNGFACNCTEGYEGSTCDVRIDYCGRWTPCQNEAQCRNQLETYLCECKPGYTDKNCSTNIDECESGPCLNSGTCTDGVNKFSCQCPEGYDGDRCEENINNCDPRDPRNSNDLPEGAVLTAWGFCGRNGQCVDGVNAFSCNCSVGYHGQYCQYDTDECEDKPCLNGGACHQNPSSPGYYCTCAPGYDGKDCQNNIDECT--------------------TPNEKGVRGN-------ETCCDGANTCRDAVNGFTCQCPTGKVGIDCCSTLSWCSNNDTCHKNGKCSDTISQTTNQPTGFTCQCDQGWTGDRCQTDINECLNAKTCRSGAKCINSPGNFTCICPAGKTGRNCDVEIDDCIDAKCQNGKQCVDGDNRFHCNCSGPGFTRPLCEDV-NECEDNPCPSDRRCVNT--VGNYECHCLEGWTGINCQTSVDDCVDNECKMSHTKECIDKHLSYECQCLDRYEGKHCVERKALEPGANATKDECGCLYGACMFNEDRVQICKCDPGFRGGKCLAPTNEASTDEVK 3635
C C G+ + + C C NG +D +C C + G C + + C S PC NG+TC +++ C+C GFTG +C+T+++ C + C +G C N Y C C G++G+ C C+P PC NG C + G +++C+CL G++G C+ NIDDC N++CQNG C+DGV Y C C + G FC ++++C P CQNGGTC + + C C+ G +G CS+N DDC C G TC D V ++C C G G C +D + C+ N C+ C Y CTC GY G +C ++DECA SNPC+H GKC + F C+C G+ G C+ +I++C + CQ+ + C DK+ GF C C G++G C++ I+ C + PC N QC +++ + C C PG+T C +ID+C S PCLN C D N + CQC G+ G CEENI+NCDP DP +GQC DG+++++C C+ GY G C DEC PCLN G C + GY C C PG G +C+ N D+C +P G R N C TC + VNGF C CP G C S ++ C +N H G C+ +S G+ C CD GW G C+ D NECL + C++G C N + C C G G NC V ID+C C N C D + + C+C P +T C+ V C NPC + C + +Y C C GW G C +D+C+ C M+H C + SY C+C + G C E + AN ++ C+ G F+ C C PGF G KC NE ++ K
Sbjct: 90 CRCASGFTGEDCQYSTSHPCFVSRPCLNGGTCHMLSRDTYECTCQVGFTGKEC-QWTDACLSHPCANGSTCTTVA-NQFSCKCLTGFTGQKCETDVNECDIPGHCQHGGTCLNLPGSYQCQCPQGFTGQYCDSLYVPCAPSPCVNGGTCRQTGDFTFECNCLPGFEGSTCERNIDDCPNHRCQNGGVCVDGVNTYNCRCPPQWTGQFCTEDVDECLLQPNACQNGGTCANRNGGYGCVCVNGWSGDDCSENIDDCAFASCTPGSTCIDRVASFSCMCPEGKAGLLCHLD-DACI--SNPCHKGALCDTNPLNGQYICTCPQGYKGADCTEDVDECAMANSNPCEHAGKCVNTDGAFHCECLKGYAGPRCEMDINECHSD-------------PCQNDATCLDKIGGFTCLCMPGFKGVHCELEINEC-QSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAKCIDHPNGYECQCATGFTGVLCEENIDNCDP-DP------------------CHHGQCQDGIDSYTCICNPGYMGAICSDQIDECYSSPCLNDGRCIDLVN--GYQCNCQPGTSGVNCEINFDDCASNPCIHGICMDGINRYSCVCSPGFTGQRCNIDIDECASNPCRKGATCINGVNGFRCICPEGPHHPSCYSQVNECLSNPCIH--GNCTGGLS-------GYKCLCDAGWVGINCEVDKNECL-SNPCQNGGTCDNLVNGYRCTCKKGFKGYNCQVNIDECASNPCLNQGTCFDDISGYTCHCVLP-YTGKNCQTVLAPCSPNPCENAAVCKESPNFESYTCLCAPGWQGQRCTIDIDECISKPC-MNHGL-CHNTQGSYMCECPPGFSGMDC-EEDIDDCLANPCQNGGSCMDGVNTFS------CLCLPGFTGDKCQTDMNECLSEPCK 959 HSP 5 Score: 389.037 bits (998), Expect = 6.480e-110 Identity = 303/978 (30.98%), Postives = 429/978 (43.87%), Query Frame = 3
Query: 1059 CKNGFCKDGND---CHCNSEWVGDLCDKDNNTCRSSPCLNGATCINDGLDRYKCQCKPGFTGMQCQTEIDLCVGSPCVNGVCNNFGTRYTCTCFLGYSGRNCTHNIDDCSPDPCKNGARCEDGIASYKCHC-----------------------------LNGYK--------GKDCDTNIDDCVNNKCQNGAQCIDGVANYTCGCRLGFDGMFCENNINDCKSVPCQNGGTCIDGINSFECKCLPGRTGRRXXXXXXXXXXXXXXXGGTCGDGVN--EYNCTCLAGFNGTNCEIDINECLLQDNICNNHGKCKDGIDSYQCTCYPGYNGTNCQHNIDECASNPCQHG-KCTDGINDFSCQCDVGWQGKMCDQNIDDCIVE-------CKDTTKP------------------KPCFEPRCQHGSKCTDKVNGFACNCTEGYEGSTCDVRIDYCGRWTPCQNEAQCRNQLETYLCECKPGYTDKNCSTNIDECESGPCLNSGTCTDGVNKFSCQCPEGYDGDRCEENINNCDPRDPRNSNDLPEGAVLTAWGFCGRNGQCVDGVNAFSCNCSVGYHGQYCQYDTDECEDKPCLNGGACHQNPSSPGYYCTCAPGYDGKDCQNNIDECTTPNEKGVRGNETCCDGANTCRDAVNGFTCQCPTGKVGIDCCSTLSWCSNNDTCHKNGKCSDTISQTTNQPTGFTCQCDQGWTGDRCQTDINECLNAK------------------TCRSG------------------------AKCINSPGNFTCICPAGKTGRNCDVEIDDCIDAKCQNGKQCVDGDNRFHCNCSGPG-----------------------------------------FTRPLCEDVNECEDNPCPSDRR---CVNTVGNYECHCLEGWTGINCQTSVD-------------DCVDNEC-KMSHTKECI---------DKHLSYECQCLDRYEGKHC 3461
C +G C+DG D C CN ++G +C + C SSPCLN CI D ++ Y+C C+PG +G+ C+ D C +PC++G+C + RY+C C G++G+ C +ID+C+ +PC+ GA C +G+ ++C C L+GYK G +C+ + ++C++N CQNG C + V Y C C+ GF G C+ NI++C S PC N GTC D I+ + C C+ TG+ C C PNPC+N C + N Y C C G+ G C IDI+EC+ + C NHG C + SY C C PG++G +C+ +ID+C +NPCQ+G C DG+N FSC C G+ G C ++++C+ E C D C E C +G C D +N F+C C G+ GS C I+ C PC NE C + L TY C C GYT KNC T ++ C PC N GTC + C CP G+ G C+ +CD R + C +G C++ N C C +GY G YC+ DEC PC +G C GY C C PGY G +C+ +DEC N+ C +G TC D VN F C CP G G+ C + C+ C G+C D I G++C+C G+ G+RC+ DINECL+ CRS A N P F C CP G +G C C KC+ G+QCV + C C P +T P C C R C ++ C W G +C +++ D ++N+C ++ +T EC+ K Y+ C D ++ HC
Sbjct: 579 CHHGQCQDGIDSYTCICNPGYMGAICSDQIDECYSSPCLNDGRCI-DLVNGYQCNCQPGTSGVNCEINFDDCASNPCIHGICMDGINRYSCVCSPGFTGQRCNIDIDECASNPCRKGATCINGVNGFRCICPEGPHHPSCYSQVNECLSNPCIHGNCTGGLSGYKCLCDAGWVGINCEVDKNECLSNPCQNGGTCDNLVNGYRCTCKKGFKGYNCQVNIDECASNPCLNQGTCFDDISGYTCHCVLPYTGKNCQTVLAPCSPNPCENAAVCKESPNFESYTCLCAPGWQGQRCTIDIDECISKP--CMNHGLCHNTQGSYMCECPPGFSGMDCEEDIDDCLANPCQNGGSCMDGVNTFSCLCLPGFTGDKCQTDMNECLSEPCKNGGTCSDYVNSYTCKCQAGFDGVHCENNINECTESSCFNGGTCVDGINSFSCLCPVGFTGSFCLHEINECSSH-PCLNEGTCVDGLGTYRCSCPLGYTGKNCQTLVNLCSRSPCKNKGTCVQKKAESQCLCPSGWAGAYCDVPNVSCDIAASRRG--------VLVEHLCQHSGVCINAGNTHYCQCPLGYTGSYCEEQLDECASNPCQHGATCSDFIG--GYRCECVPGYQGVNCEYEVDECQ---------NQPCQNGG-TCIDLVNHFKCSCPPGTRGLLCEENIDDCARGPHCLNGGQCMDRIG-------GYSCRCLPGFAGERCEGDINECLSNPCSSEGSLDCIQLTNDYLCVCRSAFTGRHCETFVDVCPQMPCLNGGTCAVASNMPDGFICRCPPGFSGARCQ---SSCGQVKCRKGEQCVHTASGPRCFCPSPRDCESGCASSPCQHGGSCHPQRQPPYYSCQCAPPFSGSRCELYTAPPSTPPATCLSQYCADKARDGVCDEACNSHACQ----WDGGDCSLTMENPWANCSSPLPCWDYINNQCDELCNTVECLFDNFECQGNSKTCKYDKYCADHFKDNHC 1518 HSP 6 Score: 388.652 bits (997), Expect = 8.567e-110 Identity = 306/897 (34.11%), Postives = 411/897 (45.82%), Query Frame = 3
Query: 1158 PCLNGATCINDGLDRYKCQCKPGFTGMQCQ-----------------------------------------TEIDLCVGSPCVNGVCNNFGTR--YTCTCFLGYSGRNCTHNIDDCSPDPCKNGARCEDGIASYKCHCLNGYKGKDCDTNIDDC-VNNKCQNGAQCIDGVANYTCGCRLGFDGMFCENNINDCKSVPCQNGGTCID-GINSFECKCLPGRTGRRXXXXXXXXXXXXXXXGGTCGDGVNEYNCTCLAGFNGTNCEIDINECLLQDNICNNHGKCKDGIDSYQCTCYPGYNGTNCQHNIDECASNPCQHGK-CTDGINDFSCQCDVGWQGKMCDQNIDDCIVECKDTTKPKPCFEPRCQHGSKC-TDKVNG-FACNCTEGYEGSTCDVRIDYCGRW--TPCQNEAQCRNQLETYLCECKPGYTDKNCSTNIDECESGPCLNSGTCTDGVNKFSCQCPEGYDGDRCEENINNCDPRDPRNSNDLPEGAVLTAWGFCGRNGQCVDGVNAFSCNCSVGYHGQYCQYDTDECEDKPCLNGGACHQNPSSPGYYCTCAPGYDGKDCQNNIDECTT--------------------PNEKGVRGNE-------TCCDGANTCRDAVNGFTCQCPTGKVGIDCCSTLSWCSNNDTCHKNGKCSDTISQTTNQPTGFTCQCDQGWTGDRCQTDINECLNAKTCRSGAKCINSPGNFTCICPAGKTGRNCDVEIDDCIDAKCQNGKQCVDGDNRFHCNCSGPGFTRPLCE-DVNECEDNPCPSDRRCVNTVGNYECHCLEGWTGINCQTSVDDCVDNECKMSHTKECIDKHLSYECQCLDRYEGKHCVERKALEPGANATKDECGCLYGACMFNEDRVQICKCDPGFRGGKCLAPTNE 3614
PC+N C+ C+C GF G CQ T V PC+NG + +R Y CTC +G++G+ C D C PC NG+ C + C CL G+ G+ C+T++++C + CQ+G C++ +Y C C GF G +C++ C PC NGGTC G +FEC CLPG G C N DDC + CQNGG C DGVN YNC C + G C D++ECLLQ N C N G C + Y C C G++G +C NID+CA C G C D + FSC C G G +C ++DD C C G+ C T+ +NG + C C +GY+G+ C +D C PC++ +C N + CEC GY C +I+EC S PC N TC D + F+C C G+ G CE IN C SN C NGQCVD VN F C C G+ G CQ D D+C PCLNG C +P+ GY C CA G+ G C+ NID C P G ++ + C C D VNG+ C C G G++C C++N H G C D I++ ++C C G+TG RC DI+EC + CR GA CIN F CICP G +C ++++C+ C +G C G + + C C G+ CE D NEC NPC + C N V Y C C +G+ G NCQ ++D+C N C T C D Y C C+ Y GK+C + L P + + + F C C PG++G +C +E
Sbjct: 34 PCVNEGMCVTYHNGTGYCKCPEGFLGEYCQHRDPCEKNRCQNGGTCVAQAMLGKATCRCASGFTGEDCQYSTSHPCFVSRPCLNGGTCHMLSRDTYECTCQVGFTGKECQWT-DACLSHPCANGSTCTTVANQFSCKCLTGFTGQKCETDVNECDIPGHCQHGGTCLNLPGSYQCQCPQGFTGQYCDSLYVPCAPSPCVNGGTCRQTGDFTFECNCLPGFEGSTCERNIDDCPNHRCQNGGVCVDGVNTYNCRCPPQWTGQFCTEDVDECLLQPNACQNGGTCANRNGGYGCVCVNGWSGDDCSENIDDCAFASCTPGSTCIDRVASFSCMCPEGKAGLLC--HLDDA------------CISNPCHKGALCDTNPLNGQYICTCPQGYKGADCTEDVDECAMANSNPCEHAGKCVNTDGAFHCECLKGYAGPRCEMDINECHSDPCQNDATCLDKIGGFTCLCMPGFKGVHCELEINEC------QSNP------------CVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAKCIDHPN--GYECQCATGFTGVLCEENIDNCDPDPCHHGQCQDGIDSYTCICNPGYMGAICSDQIDECYSSPCLNDGRCIDLVNGYQCNCQPGTSGVNCEINFDDCASNPCIH--GICMDGINR-------YSCVCSPGFTGQRCNIDIDECA-SNPCRKGATCINGVNGFRCICPEGPHHPSCYSQVNECLSNPCIHGN-CTGGLSGYKCLCDA-GWVGINCEVDKNECLSNPCQNGGTCDNLVNGYRCTCKKGFKGYNCQVNIDECASNPCLNQGT--CFDDISGYTCHCVLPYTGKNC--QTVLAPCSPNPCENAAVCKESPNFES---YTCLCAPGWQGQRCTIDIDE 876 The following BLAST results are available for this feature:
BLAST of TCONS_00023644 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
|
Copyright © 2025, MARIMBA.