TCONS_00023683 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023683
Unique NameTCONS_00023683
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2468

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023683 ID=TCONS_00023683|Name=TCONS_00023683|organism=Clytia hemisphaerica|type=transcript|length=2468bp
AGCACATATTGAATGATTAACAATGTCACTAAGAGATTTGGCAATGGAGC
TGTTTTGTCAGTTCGACGACGAAAACAAAGGATATATCACACAAGACCAA
TTACTGAACGGTAGTTGTAAGGATGGTTTGTTCTCTGAATTCTCAGAAGG
TCAAATTTTATCCATATTTGAATTACTGGACAAGGAAAATAAAGGAGTCA
TAACATTGAGTGATTTCACCGACGCCTTTGTGACCGACACCAATGAAACA
ACTACCAACGAAGACCAATATTTCCATCAGAGTGAGAGAAGCTCCATACA
GGCTTATTCTCCTATGTTTGATGGTGAGGAAATCTACGCTCGTTCACCAT
CACCATCTGCTGTTCAAGTATACAGTTACGGTTCTATGGAATCATTGCCT
GGATATGGTGAGGAATCTATACAAAAAGAACTAAGGCGTTCAATGTCTTG
CCAGAGTGAAGAAGACTGGTGGGGTGGATTCTCAACGCATCACGTCGAAG
AATCACTTGATCTTTCAATGAGTGTTAACCGTAAACGAACTGATTCTTTA
CCGTCTATAATGGATCCATTGATCTTGAAAAGGACTAAAAAGAATCTATT
GAATTCTAAGCGATGGGTGTCAGTCGATCAAGGGATTGATCAATCATTCA
TTGCAACAAATGGTCTCAATCATAGATTTGAAGAgaataataatttgaaa
aataaacgtTTGAACGGGTTTACAAAAAGTGATTCTCGAATTGACAAGAT
CCTTGTACCCTTGAAGAAACTTAGTAAACATTTATCTAACTCTAAAAATG
AGCTTCGCATTAACAAAGAAAAACGTGTTCGCAAGAAACGAAAAGGTCCA
TCATTGTTCGGTTCGAGAGACTCTGTTTTGTCGAGTATACGGTGCAGCAG
TTGTGCTAGTGTGAGAAGTAACGATAAATATTACTCATCAAATGAAGACA
TTTCTTTCAATCGGGGTCATCCAACTCACTATGGTCGTAGGCAAAGATCT
CACAGTAATTTACTTCAAGTTCAAAAACCAATATACATGAAACAATCGTC
ATACGAGCACCTTTGTTCTGATATTGATTGTAGCGATAACGAATCAGCAT
TAAGTAAACACAACAGTTATTTATCACATGACAGTTTATTATCCAATCAG
AATGGAGGATTTTATATATCGTGTGAGAATGTATCATCACCAATTGTGGA
TGTGAGTGCAGAAAGTTGGGAAACATTTCTCAGAAGAATTGGCGGAGTTT
CGTTGTTTGCAGGGAACACGAAATTGCGTTACTTATGGAAACAAATCAGT
TCATATCAACACGACTTGCTGTTCAATTTCGAAGATTTCTTGAAAGGCGT
TGTAGAAGAACATAAAACAGTTTTAACCAAATGTCAAGATGTCGAGTCCA
CTCTTCACTCGAAAATCGAACAGCACGAAAAAGCAATTGATTGTGTTTAC
GAAGAACTGGAAAAAACGCTCTCTAAAGAATTATCTCACCAAGAAAAACA
GTTCACAGACCGTGAAGACAGCCTTCGTTCAGAATATAAACATTCTTTGG
ATATGAAAGAAGCAACGTGTCAAGAAAACTTGAGATTTTTCACGGAAATC
ACTGAGAAATACGACCACTGTAAACAAGAGCTGTTTTTGCTACAGGAGAA
AAAGTCAAAGAACGACACACTACACCGACAAACTGTCGAAGAACATTTAC
AAATGTCTTCCGATTATGAAAGTATCTCACATGAGAATAAACTGTTGAAA
GACCAATTAAAGCAAGTCTTGGACCAAAATCGTGAATTTCAAGAATGTAT
CAGTCAAATGTCCACCAATGTCAAAACTgaacaagaaaaatatcaaagTT
TTGTACGAAAATACGAGGATCTTCTTGAAGAGAAAGAATTCTTGGAAGCA
AACATCACCAACTTGTCATGGGAAAATGTAGAACTAAGGAATATGAACAA
CTCCATGAAACAGAAGCCCGAAGATATGAGTTTAAACGCTAGCATCAACA
GTAACATGCCTGATCTACTTTCACCAATCAAAGACCGTTCTCCCAGCAAT
GACatcattatgacgtcatcaccacgtggtcaaaaaggaagaaaaaagaa
acttttaccGTTGATATCACTACAAGAAGAGATGGAAGAaggtgaaatcg
aaagtgaattAAATGGAGAATATTACACAGATGATGCGGGAGTGGCGTCA
GAAAGTGACGAAAACATAGATATAGAATTGAATAAAACATTACAAGAAGA
ACTTCAAGAATCTGAAGATTTGGATATCACTGTAGGACAAGAAGTGTTCG
AAGATGATGATTTGAGCTTTATGTTGaataatgaaaaagaagaagaacaa
agaaaaacatcaaCAACTTCGATAACATCAATTCCAACGAACGGTGCTGT
GTATAATGATAAGTGTGCACCAATGATTCGGTTTGCCACAAACATCCAAA
CCAACTTCAAAGTTATCN
Run BLAST on NCBI

transcript from alignment at sc0000458:102414..114246+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023683 ID=TCONS_00023683|Name=TCONS_00023683|organism=Clytia hemisphaerica|type=transcript|length=11833bp|location=Sequence derived from alignment at sc0000458:102414..114246+ (Clytia hemisphaerica)
AGCACATATTGAATGATTAACAATGTCACTAAGAGATTTGGCAATGGAGC
TGTTTTGTCAGTTCGACGACGAAAACAAAGGATATATCACACAAGACCAA
TTACTGAACGGTAGTTGTAAGGATGGTTTGTTCTCTGAATTCTCAGAAGG
TCAAATTTTATCCATATTTGAATTACTGGACAAGGAAAATAAAGGAGTCA
TAACATTGAGTGATTTCACCGACGCCTTTGTGACCGACACCAATGAAACA
ACTACCAACGAAGACCAATATTTCCATCAGAGTGAGAGAAGCTCCATACA
GGCTTATTCTCCTATGTTTGATGGTGAGGAAATCTACGCTCGTTCACCAT
CACCATCTGCTGTTCAAGTATACAGTTACGGTTCTATGGAATCATTGCCT
GGATATGGTGAGGAATCTATACAAAAAGAACTAAGGCGTTCAATGTCTTG
CCAGAGTGAAGAAGACTGGTGGGGTGGATTCTCAACGCATCACGTCGAAG
AATCACTTGATCTTTCAATGAGTGTTAACCGTAAACGAACTGATTCTTTA
CCGTCTATAATGGATCCATTGATCTTGAAAAGGACTAAAAAGAATCTATT
GAATTCTAAGCGATGGGTGTCAGTCGATCAAGGGATTGATCAATCATTCA
TTGCAACAAATGGTCTCAATCATAGATTTGAAGAgaataataatttgaaa
aataaacgtTTGAACGGGTTTACAAAAAGTGATTCTCGAATTGACAAGAT
CCTTGTACCCTTGAAGAAACTTAGTAAACATTTATCTAACTCTAAAAATG
AGCTTCGCATTAACAAAGAAAAACGTGTTCGCAAGAAACGAAAAGGTCCA
TCATTGTTCGGTTCGAGAGACTCTGTTTTGTCGAGTATACGGTGCAGCAG
TTGTGCTAGTGTGAGAAGTAACGATAAATATTACTCATCAAATGAAGACA
TTTCTTTCAATCGGGGTCATCCAACTCACTATGGTCGTAGGCAAAGATCT
CACAGTAATTTACTTCAAGTTCAAAAACCAATATACATGAAACAATCGTC
ATACGAGCACCTTTGTTCTGATATTGATTGTAGCGATAACGAATCAGCAT
TAAGTAAACACAACAGTTATTTATCACATGACAGTTTATTATCCAATCAG
AATGGAGGATTTTATATATCGTGTGAGAATGTATCATCACCAATTGTGGA
TGTGAGTGCAGAAAGTTGGGAAACATTTCTCAGAAGAATTGGCGGAGTTT
CGTTGTTTGCAGGGTAAGACTTTGTTACAATAaactctctcttattcgaa
cttTTTCCTAGTCCCGTCTAGTAGAACTCCTCTTAacatactttctataa
ttcaaatctctctctaactcgaacaaatagcgagtttatgtatttgcact
tttgaggacggtaaagtgactgaagcgattttgaaaaacccgcacttctg
acccgcaaaaccGAGGACgataaaagtgctgatttaccgtcgtcctcagt
tgatcaggatctagtcaaattagaaccttaccgtctctatcgttgaaaaa
cacacatacataaactcggtaataagattccccgtgcgagttcgaattag
cgagggTTAACTGTATTTAATATAACTATCATTATTGATAGATCAAAAGG
ACCAAGGGATCTGAGTACGAGTTTTGGGCGTAATGATGTAATTTGATCCT
GGCAAACTCGGAACCAATCTTCTTTAGCGTTAGACTTAAAGATGGTAGGT
GTATGGTATACTAATGGCCTCAGATCCGGTTACGATAGGCTCGCATAACA
CTGTCTAGGTTCGGTTCAAGGTAggtaaagtttgttttgaaaataaaaag
aagcagTATTCCCAAGCCATCTGAGCCATTCAAAAActcttaaagaaaaa
attaggtCTAATTTTAGGGCTGATCTTATTGCCATAGCAAATTTACTTCC
TATCAAACAGTAATTCTTAGCAGTCTTAAAACGTTTTAGCAGACACTTGT
TAATCCAAGCAAGTATCTTACTATAATCGACCTCCATTAAGTAAAAATAG
ACTCATTACATAATGTTACCATAGAGCCATCACTGTTGACGGATAAATTA
AAAAGTCGTTTGGAGTAGTGTAGGCATACATACTCTCTTTCCTATAGACA
GAGCACTTTGTATCCAAGAAACTACTTTATATTAATAATTCATACTAAAA
GGATGGGATTGCATATGTCTTAGTCAGTTTTTTCTACATTTTGAATGATT
AATATTGAAGCATTTGGGAAGTCCTAATCACCCTCGTAACGACTTAAACA
TTATGGTAAATTTTCCTTAGTTGCTAGTAATAAAGCTCGCAACTCTCGCT
GTTATCGTTAAAAGAAGGAAACATAAACGACCTTATTTCGTCATACtttg
gaattttttcaaagcaacgaatttttccatgttttagttacacgtttttt
tttttattagaacctagtttataagaacatatagactgaaattcgtcgaa
aaattaagaacatcttaagaacatgcccagcctcagtttggaaaaaaatg
acaagaaactacaattttttcctctttttaagcagtttNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNGGTCACGAATGGGTTGCATACTGGTGAAAGAAGACTGTATTTAGa
attaggaaaataaatttcaaattatttggctaatttctgcattggataga
aagggttaaaaaagtgcattttcttatttaaaatgtaccacgtgatacgt
aatgaccaatgaaaatgttgaaagtaatgattttttacaacttttttaca
aCTTATCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNacaacttatcaa
gttttaattgctagcaaactcgtaaaaaagtttgataacctaacgaggag
tgttttctatgagttcttaatccacctattctaatccgttgcttCTGCCA
ATGCAAATTCATTCAGTTTTAATTANagaacattttaggctgaaaattgc
taaaaaaaataagcacatccaggctcagccaaattttaggtgttctaata
aaaaaaaaaacgtgtattgtgaTAACTTTCAGATAAGCTTTCTTATTGCT
GGGAAAACATTTTTTCGAACATTTTTGGGTATTTTTCCCTATTTTTCAAC
TGCTTTTTATCGCACATACTGCGGCAAAAAAGAAGACAAGAGGCCTTGGT
AATACCTTACGACTTCACGATGACAAGTTGACTTTTACTTACCCAATTGC
TCAGTCCTTTTTCGTTGTGATCTGGCAGTGGGAAATCCCGGAAATGAGAA
AAGTTTAGCCGTACTACAAAAAGCTAACGCCTTAAGAAACTATAACACTT
CAAAAAATTATAGAATACTAAGGCGGTGGTTACATGTAGCCGTGGTGAAA
TTCACCCCGGGGTGAAATGGAAAAATAATTCACCCCGGGGTGAAAATCAT
TTTAGGATACACGTCGGCGAAAGGCGGGGTGAAAACCCTTTTTCTCAATC
CGGGGTGAAAATTTTAACTTATTTTCACCCCGGCGTGAAAACCTAATAAT
GCATAACTTTTAGATTTTATCAGTACACAACATCGAGTAGCGTTAAAAAA
CTCTTTCGGCTCTCACACGCGAGCAGGAAAGATAGCTCCTCTTGATAGAA
AAAGCTTATTGATGTTAATTTCTAGTATCACCACAATATTATCGCTTAGC
CTTCTGCCAATGCAAATTCATTCAGTTTTAATTGTAAAACTGTTGGCCCA
AAAACGAGAGTTTGAGAGATTGCAGATGGAGGCTattctttcaaaaaaca
ttGCAAAGCAAAGATATCATCGTCTACGTTTGAGTTAAGAGTTTGACAGT
CCCTTGTTTTCTGGTATCTCTGGGTTAAAAGAGCCTCAGCATCAACTTTG
CTCGCGAGCACTTTTGCACGAAACAACTTTCAGGAttgcaaaataaaaca
aaaacatacgCACANGtatttttccctatttttcaaCTGCTTTTTATCGC
ACATACTGCGGCAAAAAAGAAGACAAGAGGCCTTGGTAATACCTTACGAC
TTCACGATGACAAGTTGACTTTTACTTACCCAATTGCTCAGTCCTTTTTC
GTTGTGATCTGGCAGTGGGAAATCCCGGAAATGAGAAAAGTTTAGCCGTA
CTACAAAAAGCTAACGCCTTAAGAAACTATAACACTTCAAAAAATTATAG
AATACTAAGGCGGTGGTTACATGTAGCCGTGGTgaaattcaccccggggt
gaaatggaaaaataattcaccccggggtgaaaatCATTTTAGGATACACG
TCGGCGAAAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTCACCCCGCCTAAATACGT
GTATACAGAAACAGTGTTTTCTTTATAGACCGTAGtgaatttcaccccgg
ggtgaaatctttttttatttcaccccggggtgaatttcaccccggctacg
tgtaaccaccGCCTAAATTGTTTCTTGGGCTCATCAGTTTTTCAATGACC
TAAAGTGGTTTTGTGAATATGTACAGTATTGAATTAAAGccttaaacttt
tttaaaaactttcacTGCCAAGTCCTTTTCagaatcaaaaatttgacttt
tcggGATTTCATCGAAAATATGACTTTCAGAGGCTCCAGCGGCCTCAATT
TGGCTTCAAATGCTTTCAAAATGTACATTGATCGATGCAGTATTGTATGT
TTACTCCTAAAATTCAATAATAAAGGTCTCTGTCCCAAAAGTTATGGCCC
TTTGCAGTACTACcgatattttgactttttttactttACTCATAGTCCAC
ATCGGATGTTTTAACGTCAATTAGAAGAACCATGACATGATGTTTTTTTC
ATAGGTCACGGTTTCTTAATTAGCTTGTATCAAAACTGATGACGTTTTAA
ATTTCCTGTTAGATAATCTCCAATTAACGAGAAAAACAAAATGATTCAGT
TTTTTACTCAAACTGACCGCAACGTATTAAGTATTTTGGTGGTGGGCAAT
CAAAATCTATGGAAACGTTTCATTTTCAACTTAGTCGAATTGAAACACAT
ATGTTAAGGAAAAGCTCAGTTTTCACCATTCCCAATGTTACTGCGAGTAC
TTTTCACCAAAAGTAACGATTTCATAACGTTTCTCGATACGGTAGAATAT
ATAATTTCCTTCAGATTCAAATTGAAATCATACGATTTTTATGGTTTATA
CCCTCCTTTAGAATAACCATATACAATTTGCACCatgtatacaaaacaat
gtaagATCGCTAGAACTTTCTTTATGTGATCCTTAGAGTTGAAAAGTACA
TTTATCACAATCCTGTGGAATagagaccttatcggagtttttgatttttc
tataaaagcgattcattgtgggattgtttcgagtgtattacaatagaatt
ccctcgaggaattcctaagagattttcATTgtacaatcccacaatgcatc
gcttttttagaaaaatcaaaaactccgataaggtctattgtaaATCGTAA
ATTTGAGTACcagttgactctcgcttattcgaacttctattattcgaact
tctattattcgaacttctatccttcgaatctttctataattcgaatcttt
ctgtaattcgaatctttctatagttCGAATTTATTTCCAGTACCCGTTAA
GAAGAAACCCTCTTAATAtactctgtaattcgaacaaataagatttccCA
TTCGAGCTCGAATTAgggagagtcaactgtatattaGGCTCGGTCCTAGT
GTTCTCACAGCAGGGAGGGCGAGACACGTCTTATATTTTTATCCACCCTT
GAAAAGGTCCGATGAAAATgataaacttttcacttttcatgTAATAGGAA
CACGAAATTGCGTTACTTATGGAAACAAATCAGTTCATATCAACACGACT
TGCTGTTCAATTTCGAAGATTTCTTGAAAGGCGTTGTAGAAGAACATAAA
ACAGTTTTAACCAAATGTCAAGATGTCGAGTCCACTCTTCACTCGTGAGT
TCTTTATATCCTTTCTTTGCAAAGCTACTTGCCTTTAAAAAATCCTGAAA
CACAAAACTATCAGGAGGGCTCAGAAAGATATTTTACAGTATAAAAAGGT
TCCAGTAAGCTCGACTGGCTTCTGTAGCAACCGCAAGAAAATCAACACCG
ACTAACTAATCTTTTTGGGATAAAGGGAGGAGTGACTAAAATGATTTAGA
ACAATCAGAACAATCTGCATTTTTAACCCGCAAGATCGAGGACGGTAAGA
CACTAATTTACTACTGTTGTCCTCAATTAATCAGGAAtccaggaaaatga
aaaatctcgtTTGTTTATTAGCAGTTAGATTTGCCATGTTTTCCAGTAGT
CCTACACTACTGGCTCTCATTGAGCCAGgtcaaaaacagtttttctaTGA
ATAACTTAAAACATATCCAATAAAATTACGCGAATCTGGCTCTTAGATGG
AGGCTGGACAGGTGTCATATATTTTCAGGATACATAATTAAGTTCTATTA
GTCGTCCCATCTATTGAAAACTTTTAGCCATATCAAAGTAATGTAATGAC
GAGAAACTGATCCTAACAAGGAAATGTAGACAGGGATATACTTAAGTTTA
TTTTTTGGGGATGTCTTTTCAGGAAAATCGAACAGCACGAAAAAGCAATT
GATTGTGTTTACGAAGAACTGGAAAAAACGCTCTCTAAAGAATTATCTCA
CCAAGAAAAACAGGTAAATAGGATTAACCTTAGACTGTACCAGCCAATCC
CaaatctttgtgtgtgtgtcATGCGATTACATTACATACGATTCTTCCAG
TTACCAGCAAGAAACTGGTACAGGCTTTATTAACCTCTTCTTTAATCTTC
ACCGCAAAAAACGAATCAACCCTTTGGCGTGCAGTACAGTCATTGACCTT
AACAGTCGTTTTTTCCCCGGTCGTACGAAACGTCAAACCAACACTCATTC
GACGGCTGAGACGTCTTCATAAAGTTAGATGAATGTTAAAGCAATGCGTG
TTAATTGTCTTGTCAGGATCAGACGTCTGAACCAATCTAttattttcatc
ttccttttAGTTCACAGACCGTGAAGACAGCCTTCGTTCAGAATATAAAC
ATTCTTTGGATATGAAAGAAGCAACGTGTCAAGAAAACTTGAGATTTTTC
ACGGAAATCACTGAGAAATACGACCACTGTAAACAAGAGCTGTTTTTGCT
ACAGGAGAAAAAGTCAAAGGTAGGGGGAACTCTACGATATAATTTTACAA
ATTAATATTGTATTAGCTATAGGAGCAGCTTTCAGCTATAGGGGCAAAGG
CCATATCACGGTCGAAAGGAATTGTTAGTAATCAGGACCACCGCGCTTCT
ACAACGACTTTCTGTCGGTCCGGAATTTTTTGAGCTTTGGAGCTCCCAAC
GGGAAGCAGTTATtgggcgcaatcagtcctggtTACCAATGGTCTTTTAT
CTCACTGTACTTTATGTTTGTAGATATTAAAAATTGTTCAAGCAGTAGAT
TTTACTGAAAAATGTTTTGGAAGTTAGGGCCAATATTTGAAACTGGTACA
AAGTCAGATTCCAGAactagaaaatttattttggttcGATCAGATGTAAT
TAATAACCAAAACCATTTTCCCTTTGTTTTTTACACTGAAAGAAACCACT
ctaaattttctttatctacaGAACGACACACTACACCGACAAACTGTCGA
AGAACATTTACAAATGTCTTCCGATTATGAAAGTATCTCACATGAGAATA
AACTGTTGAAAGACCAATTAAAGCAAGTCTTGGACCAAAATCGTGAATTT
CAAGAATGTATCAGTCAAATGTCCACCAATGTCAAAACTgaacaagaaaa
atatcaaaggtATAGATACAGTTGACTCCCTCTAAATCGAAcctttataa
ttcgaatcttctgtaaaaaattggagaaaaaaaattggaaacaaacTTGT
CTGTCATCTGGAAAAGTCACTCAAAATACTCTCTGTATTACGAACTTTTC
TCTTATTTGAAGAAAATCCTTGGTTTGTTAGAGATCGTATTAGAGAAAGT
CCACTATATAAAAATCTATATTTTGTTGTCATTGTGATTTTACGTTGGCC
TCTTTTAATCGAACGAAGACTCACGAGAACTTCTTTGCGTCAAAACAACC
GTTGTAAACTTTGCGCAAGATTTCACGGAGCTTCCGTTACGGTTTAAAAA
ATGGTTCGAATCTAGGTGCTACAAAGTAAAGAATGAATGATACGGACGAT
TAGCCATAAATACTTTGCTATTGTCTCATTTCAGTTTTGTACGAAAATAC
GAGGATCTTCTTGAAGAGAAAGAATTCTTGGAAGCAAACATCACCAACTT
GTCATGGGAAAATGTAGAACTAAGGTAAGATGTTTATAGAGAAGTATATT
AATCTTTTCCTCTCCTTTTTCCTCTAATGGGGTGTTTCAAAAGCTGGTCT
GTGGCAGTTCTCTTACAGAAGTTTTACACCTATCAATTCAATATGAAGCT
TCAGAAGACTGGTAAACTCAAACCAGGGAAGAACGACGTCAAAATGCGTA
AAATCGTCGTATTGATTTCCTTACAGGCAAAGAATTTAGACGCCATTGCT
TCTTAAAGCCGATCACGCCGCTAAGGGCTGATAGATGCATTAgctcaaac
tcgttagaaatgCCGTTCGCTTGAACAAATTTCTNAAAGCCGCTAAGGAC
TGATTGATAGATGCGTTAGCTCAAACTCGTTTGAAAATGCCGTTCGctta
aacaaattttcattttcaaaacaagttTTTGTTTTACGAATCTCAGGAAT
ATGAACAACTCCATGAAACAGAAGCCCGAAGATATGAGTTTAAACGCTAG
CATCAACAGTAACATGCCTGATCTACTTTCACCAATCAAAGACCGTTCTC
CCAGCAATGACatcattatgacgtcatcaccacgtggtcaaaaaggaaga
aaaaagaaacttttaccGTTGATATCACTACAAGAAGAGATGGAAGAagg
tgaaatcgaaagtgaattAAATGGAGAATATTACACAGATGATGCGGGAG
TGGCGTCAGAAAGTGACGAAAACATAGATATAGAATTGAATAAAACATTA
CAAGAAGAACTTCAAGAATCTGAAGATTTGGATATCACTGTAGGACAAGA
AGTGTTCGAAGATGATGATTTGAGCTTTATGTTGaataatgaaaaagaag
aagaacaaagaaaaacatcaaCAACTTCGATAACATCAATTCCAACGAAC
GGTGCTGTGTATAATGATAAGGTTGGTTAAGCAATTCCTCACTAACCATA
ATCCCTACATTAATtataaaatcaattaaaattttgtattttaaatatat
tatagaaatttttttaagaatgtttcTCCTTTGCAGGAACCGGAAacagg
ttcgaattatagaaagatttgaataatagaagttcgaataagcgagagaa
GTTTACTGTAGCTTACCTGTAAGACAGGTGTGCTGGTTTAattataattc
atgatatgcaaaaCTGAAGAATGTTCTGAGAACTTTTCCACCCAAAACGC
cacttaaaaatagaaaaagtgacgtattgggtgaaaattctcagaagact
ctccaatggtgcatatcatgaatagatttaAGTTTCGTGTCCAATCCATC
AATTGATTTGTTGTTCCTTTTCATAGTGTGCACCAATGATTCGGTTTGCC
ACAAACATCCAAACCAACTTCAAGGTCATATTCTGCGGAGATGCTAATGT
TGGTAAATCAAGCATCATTCAACGGATTTGTTTCGATTCGTTCAGTGAAG
AAAGAGAACCAACAATGCAAATTGATTCTTATTCTAAAACTGTACCACAC
GGAGAGAATATTGTCAACCTATCTATTTGGGATACACTTGGACAGGAAAG
GTAACTTTTACAGTTTTTCTTACATGTTTGTACGCACTACATCGTAGTCC
CTTTGACTCGAACCTCTATACACGAATCTCTCCTTAACTCGAGCAAGTTT
TCtcatcccttcagttaacaatgcctcgtaaaccttacttcataactcga
aatttccttagctcgaacaaatttgcaTGTCATGTCNcctaagtcccccc
cccccccgggttgtaCGCACTACATCGCAGTCtatttaactcgaacctct
taacccaaatgtctccttaactcgagcaAGTTTTCtcatcccttcagtta
acaatgcctcgtaaaccttacttcataactcgaaatttccttaacttgaa
caGATTTGCATGTCATGTCCGAGTTACGGAGACTCCATTGTATATGTATT
TATAGCCATAGCATCATATCAAGGAAAATTGTTCGATGATAATTAAAATC
GGACAAAAAAGTAGATGATTATCTCAGTGTTACATGAAATGAGGaaacaa
tcattttttttttgtctcctACTTTTTTACTCTTAGATCTCCTCAAATAC
TCTAATGGATTCTGTTTTGAAATAAGGTTTAAGGTTATAACACTTGTGAC
CTGCtgtgacaaaattcttcaaTATAGATTCGCAACTCTTCAAATCTTAT
GATTTTCACCAGGTTAAAAGCAAGCGAGAACATACTTGCTAAAATTCTGA
TTGATTTTATCTCATTAGGTTTAACAGCATACCTCGATCGTACTATCGAA
AATCAGACATAGTATTGGTTGGTTATGATATCACTGATGAAATGTCTTTC
TCCAATCTTCAAACGTGGCTTCTAGATATCAAGGTGAGCTTCGTCAATTA
TTAGTTCAGAGAATCGCTCGAACTGATCAGTGGCCTAAAGAAAATGTCAA
TCTTGTTGAGACTGCCGCTCTCTAGATGTCTAGTATACAGTACTACCCGG
GGGGGCNatggtgcatatcatgaatagatttaAGTTTCGTGTCCAATCCA
TCAATTGATTTGTTGTTCCTTTTCATAGTGTGCACCAATGATTCGGTTTG
CCACAAACATCCAAACCAACTTCAAAGTTATCN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013299XLOC_013299Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023683-exon-sc0000458-1491911889:102414..103676TCONS_00023683-exon-sc0000458-1491911889:102414..103676Clytia hemisphaericaexon
TCONS_00023683-exon-sc0000458-1510915933:102414..103676TCONS_00023683-exon-sc0000458-1510915933:102414..103676Clytia hemisphaericaexon
TCONS_00023683-exon-sc0000458-1575043694:102414..103676TCONS_00023683-exon-sc0000458-1575043694:102414..103676Clytia hemisphaericaexon
TCONS_00023683-exon-sc0000458-1491911889:109111..109257TCONS_00023683-exon-sc0000458-1491911889:109111..109257Clytia hemisphaericaexon
TCONS_00023683-exon-sc0000458-1510915933:109111..109257TCONS_00023683-exon-sc0000458-1510915933:109111..109257Clytia hemisphaericaexon
TCONS_00023683-exon-sc0000458-1575043694:109111..109257TCONS_00023683-exon-sc0000458-1575043694:109111..109257Clytia hemisphaericaexon
TCONS_00023683-exon-sc0000458-1491911889:109886..109976TCONS_00023683-exon-sc0000458-1491911889:109886..109976Clytia hemisphaericaexon
TCONS_00023683-exon-sc0000458-1510915933:109886..109976TCONS_00023683-exon-sc0000458-1510915933:109886..109976Clytia hemisphaericaexon
TCONS_00023683-exon-sc0000458-1575043694:109886..109976TCONS_00023683-exon-sc0000458-1575043694:109886..109976Clytia hemisphaericaexon
TCONS_00023683-exon-sc0000458-1491911889:110324..110482TCONS_00023683-exon-sc0000458-1491911889:110324..110482Clytia hemisphaericaexon
TCONS_00023683-exon-sc0000458-1510915933:110324..110482TCONS_00023683-exon-sc0000458-1510915933:110324..110482Clytia hemisphaericaexon
TCONS_00023683-exon-sc0000458-1575043694:110324..110482TCONS_00023683-exon-sc0000458-1575043694:110324..110482Clytia hemisphaericaexon
TCONS_00023683-exon-sc0000458-1491911889:110935..111122TCONS_00023683-exon-sc0000458-1491911889:110935..111122Clytia hemisphaericaexon
TCONS_00023683-exon-sc0000458-1510915933:110935..111122TCONS_00023683-exon-sc0000458-1510915933:110935..111122Clytia hemisphaericaexon
TCONS_00023683-exon-sc0000458-1575043694:110935..111122TCONS_00023683-exon-sc0000458-1575043694:110935..111122Clytia hemisphaericaexon
TCONS_00023683-exon-sc0000458-1491911889:111548..111637TCONS_00023683-exon-sc0000458-1491911889:111548..111637Clytia hemisphaericaexon
TCONS_00023683-exon-sc0000458-1510915933:111548..111637TCONS_00023683-exon-sc0000458-1510915933:111548..111637Clytia hemisphaericaexon
TCONS_00023683-exon-sc0000458-1575043694:111548..111637TCONS_00023683-exon-sc0000458-1575043694:111548..111637Clytia hemisphaericaexon
TCONS_00023683-exon-sc0000458-1491911889:112060..112534TCONS_00023683-exon-sc0000458-1491911889:112060..112534Clytia hemisphaericaexon
TCONS_00023683-exon-sc0000458-1510915933:112060..112534TCONS_00023683-exon-sc0000458-1510915933:112060..112534Clytia hemisphaericaexon
TCONS_00023683-exon-sc0000458-1575043694:112060..112534TCONS_00023683-exon-sc0000458-1575043694:112060..112534Clytia hemisphaericaexon
TCONS_00023683-exon-sc0000458-1491911889:114192..114246TCONS_00023683-exon-sc0000458-1491911889:114192..114246Clytia hemisphaericaexon
TCONS_00023683-exon-sc0000458-1510915933:114192..114246TCONS_00023683-exon-sc0000458-1510915933:114192..114246Clytia hemisphaericaexon
TCONS_00023683-exon-sc0000458-1575043694:114192..114246TCONS_00023683-exon-sc0000458-1575043694:114192..114246Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000458supercontigsc0000458:102414..114246 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.249096	0.199985	0.182207	2.12053	1.45505	3.97304	2.77478	1.33966	1.88218	1.52505	0.67644	1.39059	0.399104	1.06052	0.603467	0.736986	0.706413	0.122443	1.04746	0.300831	0.141227	0.0969133	0.349782	0	0.746156	0.646417	0.561515	0	0.118047
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00023683 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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