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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00023704 ID=TCONS_00023704|Name=TCONS_00023704|organism=Clytia hemisphaerica|type=transcript|length=1133bp
Cagcaatatgaaaaaaatagtagatgcgaaaaaaaaaacttcaaacaata
aaaaagtatatGATATATTTATTCTGGAACTTTAGGGAGAAACTGAGGTT
TTTTcttgtgaaaaaaattattcctCTTTTTTTCCGTTTGAGTGTGTGAG
GTAAATAGATCAAACTGTCTAAATTCAACAGTTAGTACACATAGAAAACT
GATATTTTAATGATTATCAGAATTTCgagaaaacaataaaatgaaaactt
atCCACTCTGCTCCTTCCTCTTTGAAGGTTTAAAATACAGACCGGAATTG
AACAAATACTTCCATTTCTAAAGAACGACTAACTTCCCTTTTAACTTCCT
TCTCTTCCTTCAAAAAAACATTCAGCATGAATTACATCATTTGAAGAGGC
GTCAAAttgacgttcatctaacgtccacgacgtccatataacgttaaatg
taCGTTGACACAATGTTGTATGTCAAAGCGGGTTCCAGTTTCATCCACAA
TACCATGTTATTTGACCCAATATATCCTTAAAGCCCAACACAGATCCTGT
CCTTATGATCTAGTCGATGTTTAGAATCGCGAAAGATGCCGATCAGTACT
ATCATCTACGCAGATTATGATCCAATTTTCATTACGGCTTTAAGGAAATG
CACATCCATCTTACGTCCATCTAACACCCATCTAACGTTGGTATACCTTA
ACACATAATCTACAGAGTGCAAAGGCTCAATCTTCCTATGTTTCCACTGA
AACGCTGTTAACGAGATATTTCCATACAACAAATTTATTAAGATTTGTCC
AAAATAAAGTACTCAAGTAGTCCAAACATGACTGAACAAAAAGTGGAGAG
CAAAAACGACTTGACTTTGCTACATATATAGAGTAATTGTCCTTAATATC
TTTGAATAGCTCTCTATCATAACATTCAAgtcaaaagaggaaaagaacTT
ACTGTggctattttgatttaaaacttCCGTTTTGCGTAAACTATAGTCAG
AGACCGATTTCAATTTGCcggtaaaaaaaataaagagagaaaagctaaaa
aaacttTAGGGTAAAAGAGTTATAAAAACTTTCCATACCACAGTCACACG
GTTTCTGTTTTTGAAGCTAATCACTTCCGGCTG Run BLAST on NCBI transcript from alignment at sc0000458:140825..141957 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00023704 ID=TCONS_00023704|Name=TCONS_00023704|organism=Clytia hemisphaerica|type=transcript|length=1133bp|location=Sequence derived from alignment at sc0000458:140825..141957 (Clytia hemisphaerica)
CAGCCGGAAGTGATTAGCTTCAAAAACAGAAACCGTGTGACTGTGGTATG
GAAAGTTTTTATAACTCTTTTACCCTAaagtttttttagcttttctctct
ttattttttttaccgGCAAATTGAAATCGGTCTCTGACTATAGTTTACGC
AAAACGGaagttttaaatcaaaatagccACAGTAAgttcttttcctcttt
tgacTTGAATGTTATGATAGAGAGCTATTCAAAGATATTAAGGACAATTA
CTCTATATATGTAGCAAAGTCAAGTCGTTTTTGCTCTCCACTTTTTGTTC
AGTCATGTTTGGACTACTTGAGTACTTTATTTTGGACAAATCTTAATAAA
TTTGTTGTATGGAAATATCTCGTTAACAGCGTTTCAGTGGAAACATAGGA
AGATTGAGCCTTTGCACTCTGTAGATTATGTGTTAAGGTATACCAACGTT
AGATGGGTGTTAGATGGACGTAAGATGGATGTGCATTTCCTTAAAGCCGT
AATGAAAATTGGATCATAATCTGCGTAGATGATAGTACTGATCGGCATCT
TTCGCGATTCTAAACATCGACTAGATCATAAGGACAGGATCTGTGTTGGG
CTTTAAGGATATATTGGGTCAAATAACATGGTATTGTGGATGAAACTGGA
ACCCGCTTTGACATACAACATTGTGTCAACGtacatttaacgttatatgg
acgtcgtggacgttagatgaacgtcaaTTTGACGCCTCTTCAAATGATGT
AATTCATGCTGAATGTTTTTTTGAAGGAAGAGAAGGAAGTTAAAAGGGAA
GTTAGTCGTTCTTTAGAAATGGAAGTATTTGTTCAATTCCGGTCTGTATT
TTAAACCTTCAAAGAGGAAGGAGCAGAGTGGataagttttcattttattg
ttttctcGAAATTCTGATAATCATTAAAATATCAGTTTTCTATGTGTACT
AACTGTTGAATTTAGACAGTTTGATCTATTTACCTCACACACTCAAACGG
AAAAAAAGaggaataatttttttcacaagAAAAAACCTCAGTTTCTCCCT
AAAGTTCCAGAATAAATATATCatatacttttttattgtttgaagttttt
tttttcgcatctactatttttttcatattgctG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00023704-exon-sc0000458-1491911889:140825..141957 | TCONS_00023704-exon-sc0000458-1491911889:140825..141957 | Clytia hemisphaerica | exon |
| TCONS_00023704-exon-sc0000458-1510915933:140825..141957 | TCONS_00023704-exon-sc0000458-1510915933:140825..141957 | Clytia hemisphaerica | exon |
| TCONS_00023704-exon-sc0000458-1575043694:140825..141957 | TCONS_00023704-exon-sc0000458-1575043694:140825..141957 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000458 | supercontig | sc0000458:140825..141957 . |
Blast
The following BLAST results are available for this feature:
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