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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00023714 ID=TCONS_00023714|Name=TCONS_00023714|organism=Clytia hemisphaerica|type=transcript|length=2065bp
ATTCTTGTGCTTGTGAAAAGTCGAGAAAATTGGCTTTATATAAGAACCTT
CATCAGTCTGTTGCAGATTTAAGGTTCAGAAATTTTGGAAAGATTTCAGA
CTGTTCGAGGACTAATATATCAAACGAGTATACTATTGAAATAtattaat
aaataataaaaaacctGAAAAGAAGAAACGTGCTTACTTTGGTAAACCTG
GTCCAGTCCAcaagaattctttttaaaaaccaTCCGCGATAAACCTTTTC
ATCGAATGACTTCATGTTTTGATTCCTATCTCTGAAATGGCTTTTACGGC
ACTAGGCTGGATTGAGGCCTATTGATAGAATCGATAATATTAAAAAAGAT
AGGCTAAAGCCTGTGAAACTTTTCCTCGTATCATAGATTAGATTGTGAAA
TTCGGCCATTTTGAGAAGATAAGAGAAAACACATCTAGCACCAACTCTTG
ACCAAAATGACattatttcattttggtaaCTGCCTAGCATTGAGCATCGG
ACCATACTTCCTTCTATACAAATCTTCCGGATTGTCGGAATACCAGACGG
TATGGAAATTAGCAAAAGCCGGCTCTGCTTATTTCCTGACACAGCTATGT
AAGATGTTGGTACTGGCGACATTTTTCCCGATGAGTGAAGGAACACAACA
ACCACAAATGGATGTTGTGGGAGAATTCATGAAATCCACCATGGACTTGA
GTGATCTGTTAGGCCTTCACCTCTTGATGCTTCGAATCCCTGGTCGTGGA
GAAATGAAAGTATTGGTTGCTGGCCTTGGTTGGGCAACAGCAGAATACTT
GACGACCAAATTGATTCCACTTTGGGTTGGTGCAAGAGCTATTGAGTTTA
ATTGGATACACACACAACTTAGTTTTGATGCCAATATCAGTCTTATTTTG
TATTTATCGGTAGCAGCGCTGATCTGGTTATGGTCACGAACAGACTTACA
AAAAATGTATACACCTGTTGTTTTCGTACTGCTCATGTTCTGCTCATACA
GACCTCTCGTTTTAGAAATCGTTTCTTTCGCATTCGGATTATCGTCATGG
AACCTGCTCTTCTTCAAAGCCATCTACACCAGTGTCATCGGAGCCATCAC
ACTCCACATCTATATCGGACTCGTTAAAACATTGAAGACCTATTAAACTC
CATATCAAATTTATTCGAAACTTTGAGAGCTTGCCTCTTGAGATGGTTAC
TTTACTGACGTTTGAAAACTTTGGAACTTGGATAAAATCTTTTACAGATA
TCCATGACTACTGGATCCTGGGTAGACTTACCAGAGAGCATGGAAGATTT
AATGGACTGTTGTAAAGTACGATGAAATAGCAAgtcttttttagcaattt
taatATCTCATTTTTTAAACCAGTAACAGTTggtagattttttgttttga
gcaGCCCACAATGTTGTAACTATTGAGTTTGGCTGATAAAAATGAATTGT
TAAAAATTGTATTGTAAATGATTTTCCTCTTGAAACTACAGGGTGTCCTG
GCAGATTGCTTCTCCTGATTTGTATCTTTAATCCTTCACACAAAGGGTGA
ATGTGTATACACGTTCTGAAAAGCCCATTTTATATACTGCACTTTATGAC
CTAAAGTTGTAAAACGTTGTTAACGTGAAACCAGTGAACTGCTATCAGAT
AGAATAACATTTTACTTTGGCTGCTTCACAGTCTATTCAGATTCCTtttg
gtcgtaaaaacagtttctcaaaatcAGAAGCGTGGATAAAATTCACTTTA
TAAGGGTATATTTTCGAAAGAATGTAATCAAGCATGTGAAAATATGTAAT
TAATATACGATGAcaacaaagaaatgaaattattattacaCACGTATAAC
AGAATTCCCATTGCAACTAAGGGACCCCTTACAGCCACGCTTCATTTTGA
GGAACAAATCTTGTATTTATTCTATCTATCTGATGATAGTTCTATGGTGA
AACAGCAGCGGCAACCTCGTGGACATCTTTTTACGACCATCACCCAACCT
ATTTTAGGCGTCACAGCTTTTTTTAAAGCCGCGTAAAAATAAATGTTCGC
TTTTCATTAGTGCGA Run BLAST on NCBI protein sequence of TCONS_00023714-protein >TCONS_00023714-protein ID=TCONS_00023714-protein|Name=TCONS_00023714-protein|organism=Clytia hemisphaerica|type=polypeptide|length=229bp
MTLFHFGNCLALSIGPYFLLYKSSGLSEYQTVWKLAKAGSAYFLTQLCKM
LVLATFFPMSEGTQQPQMDVVGEFMKSTMDLSDLLGLHLLMLRIPGRGEM
KVLVAGLGWATAEYLTTKLIPLWVGARAIEFNWIHTQLSFDANISLILYL
SVAALIWLWSRTDLQKMYTPVVFVLLMFCSYRPLVLEIVSFAFGLSSWNL
LFFKAIYTSVIGAITLHIYIGLVKTLKTY Run BLAST on NCBI transcript from alignment at sc0000460:124071..135036+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00023714 ID=TCONS_00023714|Name=TCONS_00023714|organism=Clytia hemisphaerica|type=transcript|length=10966bp|location=Sequence derived from alignment at sc0000460:124071..135036+ (Clytia hemisphaerica)
ATTCTTGTGCTTGTGAAAAGTCGAGAAAATTGGCTTTATATAAGAACCTT
CATCAGTCTGTTGCAGATTTAAGGTTCAGAAATTTTGGAAAGATTTCAGA
CTGTTCGAGGACTAATATATCAAACGAGTATACTATTGAAATAtattaat
aaataataaaaaacctGAAAAGAAGAAACGTGCTTACTTTGGTAAACCTG
GTCCAGTCCAcaagaattctttttaaaaaccaTCCGCGATAAACCTTTTC
ATCGAATGACTTCATGTTTTGATTCCTATCTCTGAAATGGCTTTTACGGC
ACTAGGCTGGATTGAGGCCTATTGATAGAATCGATAATATTAAAAAAGAT
AGGCTAAAGCCTGTGAAACTTTTCCTCGTATCATAGATTAGATTGTGAAA
TTCGGCCATTTTGAGAAGATAAGAGAAAACACATCTAGCACCAACTCTTG
ACCAAAATGACattatttcattttggtaaCTGCCTAGCATTGAGCATCGG
ACCATACTTCCTTCTATACAAATCTTCCGGATTGTAAGTATTTGTTTAAA
ACTTAACCATGCTTCATACATTTCTTTTTCCTCAAACCAGGCCaattttt
tgacataattttcTGTTTATGTAATGGAGAGtagttaagggggggggggt
actaggggtATGTGTGGACAGGACCTCCAAAAACTGGCGCCTTAcagaga
ctgattttttctgaaaagtgaAAAGGTGATTCTTTTAGAgagaattttta
agaaaaaagtcTTAGCTACCGTGAGAtctcgggtaacttgcatcagcgga
ggctaacatgcatcatggaggtataaagaaacaggagatgtatgctattg
taatcaagctcgccctacgattaaataaaaaaagttacgatgtatgcatg
ctcataatctcatatatcgtgcatttttaatgaggtcttttatccatagg
tgaaatcttattggctcatttaagctttagaaattagatgagacgagatt
cattgtttctgacatcagtgttagaaaatatttggactaaagaaaggcct
gtaaacttggcaaaccttcatcaaatgataagatttatcgatcaatgttt
tctttaaggtgaactctattgcttgatactttcctccaaaattctccagc
gactttatgtctacaaattgagtctgaaatcgtgtgtgcttataaagaac
ttttaattttctggcttgagaaaatgtcttttcaaaacaaaatttaacgg
ataacgaaattgaacataaacctttttcatggacgaagttttatttaatt
tttgtatattagaaggctagaaatcttcaatactgatagtaagaatgtta
aGAGCGAACtcgagttctactaaaaagtctaatttcatCAGGcaagctta
gaatttcttttgatacatttcataaaagaaatcaaaagactttaacgacc
aattaccgacaaattcaactcctgtttttctttatacctctatgcatgca
tagccctcaaatgaatgacctggctcgtagagtagagctgtgagcggagc
tgcttagttcatttgttttgaaattttgctgctttgattggtcagtcatt
tgatggctatgcaagtttccctccactgatgcaagttacccgacttcaca
atACCATTagagagaaaattttgcaattctttctctcaaaatcaaaaaaa
aactctGGAAAAAAGGATTAATGTCCCTGTTTAGAAAaccaacttttctt
ttttagaatataccttacaatctatagaaactagattgctgacgtgtgga
aagaaATTTCcgcatgactgatccttttgtttcgataagcgggaattaat
tttcttctcgtttctttctttcctttttctttcttatcagttcacCCTTT
CTCTCATTACTttcaaagcgtggttagctcaagcggttagatcgTCTGTC
TCATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNatgttaattgctattagtaattacgcgttcaattcgaatct
atgatctgttccctcctagtgaggagtttaatacccttataacaaccgta
ttttataagcattaaatactgaaattcaaataaccACCACGCAAGAAGAT
AAGCAAAGGATTGGATCaagtgtcaaacattttgacctggaaatcaatta
ttattctgcctttaaagtataaaacgagaagttcaatgattctgaaagaa
gttatttgctgattctcttacaaagaatcgctcgctcactcgctggctga
aagtgaaagtgaaagtagtgaaactgaaactgtcagtcaGCAAACGCAGA
CGCAAACGCCTGTacccgttcttctatatctcagccttgaataatcgctt
gtggcaaaaaaaagattgaagaaaaaaaaacttaaaaaagttcttacaaa
gtgatgctatcatagcttatctaaaccttagacagagagcggaggtaata
tatgctagctacttgtttgattgaccttcattataaaagaaggagaattt
aaaaaaaaaaattgaagaattgaaaaattggacatCCATTGGAATCGAAC
TCAGAGCCCCATGCATATGAGACAGAcgatctaaccgcttgagctaacca
cgctttggAAGTAGTGAGGGAAAGCgtgaactgataagaaagaaNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNattcc
tttccacacgtcagcaatctagtttctataaatatgaaaactagattgta
aggtatattctaaaaaagaaaagttggtTTTCTAAACAGGGACGTTGATT
ATGTTGCCTTTGGAACACTTTTAGCCTTTACTGTAAAAGTGACGGTGGAT
GAATTAAAATCAACATGTCAATTTTAGCTTAGCCAAGGTGCTAAGCTAAT
AGTATAATTTTGACCTTAAAAAAAGATGTATACTATTAGCTTAGTTGTAG
TCGcgttattttatcaaaacaatcagaaacAATATATTGTTGTATATATT
CTGATTGCAAGAGAAAATACTAGAATCTGTTTGGATTGATAAAACGAGTT
GGAAAGAACGTTGTTTGCAATCAGGTGTTTGTATAAGTGTAGTGAAAACT
CATTGAACAGAGGTTAGACATCATGTCTGACACTCTGGCTAATCTTAGCT
CTAAATGTCTAACAGTCTAGTAGCATGAAATTCAGAATATGAATCTTCAA
CACAGGAATCAAAACTGTTAAAGTGCACTCACAAAGCAAGGATTTGTCAG
AGAAACAAAACTAATAACAGCACTGTCATCATTTTGACattcaaacaaaa
gaatttgCGTGCATAATTGTTGCTTGAAAGCAAGAAAgctcagtttatta
ttgtaATTGAGTTACAAATACAGTCATATTCATAATTTTATCTATGTTCA
TCAAATTTTGTCCAAAAATAATGGAATCAAAAAGTTGAAGAAAGAAAGCC
ATATAtatgtcaaaatatttttggaattttgttgaattttgccTAAGATT
GCTTAGCCTGTCAATAGCATGTTAGAAAAATGTTTGAATCAAAACAGCCA
TAAGTCAATTTTGTGACCTACAGTTTTTTTCTCTGGGCTTTATCTTGAAT
TGAgcttcgaaagattcgaaatcaCATAAAGTATATATACTAATTTCTAG
CtaaggggaccaatattttagtccAGGCAATGTCAACCAAACAATCGAAC
TAGTCAAACTTAGTCATACTTATTGACAATTGATTACATTACAATCGATT
ACAGAACCAAATCAAACAGTAATCGAACTGAGAAAATCtggtaaagttcg
attagtttgatccCAATTCCATTAGTTtggtaaagttcgattactcAGCC
CTAACTCACCACAGAAAATAATGTTGTACATTATATGTTGGTTTTATAAA
TTATGTCGCGCATTTTAATGTGGTACATTAAAAATTGTAAAGGACCTCTC
TACACTCAAAGAAATAGAAGAAGGCCTCTTCTACACTTTACAGACATAAC
CATTTCCCTTTTAAGTTGGTGCTCATCCATCCCAGAGCATCTAAATAATG
ACGcaatgtttcgagctccaactctgaccctaactgataagaaatcgaag
aaatcaaaaagttcaaaaggaAGAATCGAAAAAGTGGACATTTGGCCGTT
CATAACCCCAACCGAAAGTGACTGAACCACCCCTACCGATTCATTCCCCT
GTTTATCACAGGAATTAACTAAAtctggtttaaaagaacgacaaattacg
catgtgtGTTATTAATGCAGGAATCGCAAGACGCATCTACTGTTATAATG
TAGGACATTATAAATATTAAAAACCTAGATATAATGTACAACATTATTTT
CCGTGATGAGTTTGTGTTGGATTACTGTTCaattgtaataaaaaaaaaac
tggaatttTCTGACTTCAGCGTCTCTTACTGGGACTTGTTATCATTCGTA
TAACATACTGTAACTTTGTGTAATCCCGACATACCTCGTCTAATTCCAGC
ATGGTAACTATCTAGTCTTTTCTACTATGTTACTATGGCATAAGTCTAAC
TGACTATTTTGACTAAATTCCGCTGCAAATTCAGGGATCCCACTCCTcct
aaaattcctaaaattcctaaaataaGTCAAAACTTCTAAAACCCTCCTAA
ATTTCAACGAATTCTCCTAAATTCCTAAAATCTGAAAACTTTATCAAGCA
CGGTAGCTGATTATGTTTGTATATTTGTATAATGAGACAAGAAACTAAGA
TCTTTTCCTCAGtaaagtcaaaacaaactggGAGCAATCTACCTGACCTt
gaaaaaacatgtttaaaatatatttttgcactgaaatatttgaaacaaaa
gCCTATGCTTATTGAAGGAGTGCAGACTTTATTCAACAAAGAGGGCTCAA
ATGTTTAAGAGAGCAAGGTTTGGTGGTTTGCGccctcatctttgattttt
ggacctacctggaggtcctataaattaacctttgtccgttcgtccgttcg
tccgtttgttaccagcttttctcgagattggctcattagttttttctgat
ttttggcacaatgatgcaaaatggtaatgcccaaaatgtgacggagcccg
attttcgaaaaaaaaatcatttccggccgaaaatgccggaaatatgccgg
aaatatgccggaaaaaacgtttttttggcattttctcgagatttcatcat
tagttttttcagattttttgcacaaagatgcgtagtattagcaatgccca
aaacatggcagagtccgatttttgagaaaaattcttttctggccgaaaat
gccggaaatcgccgtttttgcagattttcatcggactttttccttatatt
tcgttgtttttcacacaaaaacattattaatagcattGTCCatgatcaag
catggttcaattgtcgataaaactgatttttgaagccggaactttctaaa
attcGCCGGAACAgtcgattttcgccggaaaaacggtatttcttgaattt
ctcgagctgtactttatatttttttatgaaattttgcacactgatgtaaa
atgacaNNaattttttccggccgaaaatgccggaaatatgccggaaaaac
cgttttttttacattttctcgaatttccatctttagttttttctgatttt
ttgctcagagatgcgtattcgcaatgctgaAAACATGGCtaagttcgatt
tttgagaaatttttttttcccgttgaaaatgccggaaatcgccgtttttg
cagattttcattagattttattccttgtatttctatgtttttgacacaaa
aacattattgataacaatgctcaccatcaagcatgattcaattgtcaata
aaactgatttttgcgaccagaacttccNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGATgccttttg
ttaatatttttgatcTTCTAAGTTAGCAGTAAGTATGACTGGTGATTTAG
CCATATTGAGAGAATTTCTTTTAGAACGAATAATAGTTTACTAATACGTa
aagtaattttatttttgttacattATTTCAGTCTTTTTGTGGGTGATTTT
TTCTGATTGCTGACTTCAGGtcgattttagaaatttatttcttaaatttt
cctaaaatcctcctaaaaattggaaaattctcCTAAAATTCTCCTAAAAT
TTGTCCTAAAATTAAGATATTCAGGCGTGGGATCCCTGCAAATTCTAAGT
gtaaaaagttgagactttttAACTTCCCTGATCCTTACAGGGACTTTAAG
GTCTCAAAATTGGAACCCTTAAAGCCCTGTATCTCTCACTTGCTTCACTT
GCTAGAGTACCTATAGCCTGTTTGATCTTGTTGATACATTGATGAGTGAA
TGCTTTCCCTCTCAGGGTAAATGGCCCACTCCTACAAGCTATACTTGTTA
TCGTTAGACGCAAATCGAACCTATCAAACAATCGAATTctatcgaactaa
tcaaactgaAGGTTCCAGTAAAGTTTGATTACTGTTCCATTTGGTTCAGC
AATCAAACAGTTATCGTTCATTTAATTTGATGAAGTTTGATGGTGCAATT
ATAATAATAAGTTTGATAGGGTTTAGTTGACATTGCCTGGTTTTGTTTGA
ATTATAGAATAGTAGAGGTTTGAATGACCAGTGACATTTTAACCATTTTC
AGGGAGCCAGcttccaaatttcaaaagtgataCTTTAGCTTCTTATTGTA
GATTTTTAGGCCTCAACTTTAGTaataaaatttcaatctttATAGGTCGG
AATACCAGACGGTATGGAAATTAGCAAAAGCCGGCTCTGCTTATTTCCTG
ACACAGCTATGTAAGATGTTGGTACTGGCGACATTTTTCCCGATGAGTGA
AGGAACACAACAACCACAAATGGATGTTGTGGGAGAATTCATGAAATCCA
CCATGGACTTGAGTGATCTGTTAGGCCTTCACCTCTTGATGCTTCGAATC
CCTGGTCGTGGAGAAATGAAAGTATTGGTTGCTGGCCTTGGTATTTTACT
CTCCTTTCAATGTTTTATATGCTTCACTTCATTTCTGATACAAAGAGCTG
Tattcaaagaagaagaaaaaaaagccatttttttatcttaatttgaaaaa
agttttgcttAGGGACAAATTATGTCACTGTGCCCAGAATTTTGTCATCA
AGGTATGAAATGCATTGgtgataaagttttttttcatcaCAATTGTTTTT
AGGTTGGGCAACAGCAGAATACTTGACGACCAAATTGATTCCACTTTGGG
TTGGTGCAAGAGCTATTGAGTTTAATTGGATACACACACAACTTAGTTTT
GATGCCAATATCAGTCTTGTAAGTTTACTCATGACTCCCTCCAATTAGGT
TGTGATTTCTTCAcagcagcagcagcagcagcagAATTACTTCATATTTT
TCAGCCTTTAGTTTGTCTAATGTTTGAGACTTTATGTTTTATTTCTAAGT
GTTTAAGGTTTTGAATGATTTCCCACGTCACCTAAGAATCCCCTGAGAAT
TCAACAACTTGGTATCCTAATTAAGAGGCCCACAAGTGTCCATCAAAAAA
Gcaaatataacaatagcgttcagtttgaggtcgttgttgttattttctgc
ccgcgtagtttgattattcgcccgatagtgtcattttggcccgacgcgaa
gcggagggcgcaaatggcactagagggctaataatcaaattgCAAAtcgc
aaatgacgttattgccCTATACCCGGGCCGTTAATGATATTTTAGCCCTC
TGAAGCCTGGCGCTttagttttctcagcgcgggtatgacaatttgagtca
caaaacctttcaatactGCCCGCCGCTTgaacctttaatggcttacttaa
tgaccgctatatggataataatagaaTGTAACATTTTAACATGTCCTAAT
TTATAATATGTTTTAAGACCAATATTCTCCTTTTccctttaaaattaatt
ttagtgttttgggaattagatAATGCACTGAATAAGctaatttttacata
agtgtttccatTTCATATTAGACACATGTTTTATATCAGGCTGGTGTCTC
CCAATTGTGTTCAATTTTATGCTGCATTTataatcaaaaaattgttgttt
ttgttCGTTCTTTCTAACGCATATTGCTTCACTTTAACACTCTTTTTCTA
TGATGAACTGACATTCGTTTTGTTTTCTCCCTTCTAGATTTTGTATTTAT
CGGTAGCAGCGCTGATCTGGTTATGGTCACGAACAGACTTACAAAAAATG
TATACACCTGTTGTTTTCGTACTGCTCATGTTCTGCTCATACAGACCTCT
CGTTTTAGAGTAAGTTATCTGCTATTATCTATCAAATTTCCTATTTCCTA
TCCTGTCCTAGTGTCATGATACAGTATATGCTTAGTATTTCTTTTGGATC
GTAATCAACTCCTTGAAAGAGCATCTCTCATCTCGACATTGCTATTCTAT
AAATTCCTATACCTTTAATTATCCATTGAACCACGACATTGGAAACAGTT
GAGTTTTCATCATATCTTACTCATTTCGTTTATGTAGTCCATATCCTCTC
TGATTCTTCAATAGTCCAAAGTCAGAGAAAGCAGACAGTCATTAGCGCTT
TCTTTTGTAGAGAAATATTTTATCTCCATTCATGTCATGGCTCAGGGCGG
ATCCTATGGCTGCtcaaaatttcctcaaaaataaaaaaaaattaaaagtt
atgaagCTTNATTTTATCTCCATTCATGTCATGGCTCAGGGCGGATCCTA
TGGCTGCtcaaaatttcctcaaaaataaaaaaaaataaaaagttatgaag
CTTTTTCTCGTCGAAAACTGGCGAGCGTTGGTTATCCACATAAGTTTTTC
CCATTTTGAATTTGACCTGAAAATAGAACAGATACTTGACTCCCGCACCC
TTTCGTGACTTTTTTTGTCTCACCTTCTAGTATTTTCCCAAAGATGAGAG
AGAACCTGGCACTCATCCACTCGTATTGTTCCTGGTGACGAATTCCttac
tttttctcatctttcaGAATCGTTTCTTTCGCATTCGGATTATCGTCATG
GAACCTGCTCTTCTTCAAAGCCATCTACACCAGTGTCATCGGAGCCATCA
CACTCCACATCTATATCGGACTCGTTAAAACATTGAAGACCTATTAAACT
CCATATCAAATTTATTCGAAACTTTGAGAGCTTGCCTCTTGAGATGGTTA
CTTTACTGACGTTTGAAAACTTTGGAACTTGGATAAAATCTTTTACAGAT
ATCCATGACTACTGGATCCTGGGTAGACTTACCAGAGAGCATGGAAGATT
TAATGGACTGTTGTAAAGTACGATGAAATAGCAAgtcttttttagcaatt
ttaatATCTCATTTTTTAAACCAGTAACAGTTggtagattttttgttttg
agcaGCCCACAATGTTGTAACTATTGAGTTTGGCTGATAAAAATGAATTG
TTAAAAATTGTATTGTAAATGATTTTCCTCTTGAAACTACAGGGTGTCCT
GGCAGATTGCTTCTCCTGATTTGTATCTTTAATCCTTCACACAAAGGGTG
AATGTGTATACACGTTCTGAAAAGCCCATTTTATATACTGCACTTTATGA
CCTAAAGTTGTAAAACGTTGTTAACGTGAAACCAGTGAACTGCTATCAGA
TAGAATAACATTTTACTTTGGCTGCTTCACAGTCTATTCAGATTCCTttt
ggtcgtaaaaacagtttctcaaaatcAGAAGCGTGGATAAAATTCACTTT
ATAAGGGTATATTTTCGAAAGAATGTAATCAAGCATGTGAAAATATGTAA
TTAATATACGATGAcaacaaagaaatgaaattattattacaCACGTATAA
CAGAATTCCCATTGCAACTAAGGGACCCCTTACAGCCACGCTTCATTTTG
AGGAACAAATCTTGTATTTATTCTATCTATCTGATGATAGTTCTATGGTG
AAACAGCAGCGGCAACCTCGTGGACATCTTTTTACGACCATCACCCAACC
TATTTTAGGCGTCACAGCTTTTTTTAAAGCCGCGTAAAAATAAATGTTCG
CTTTTCATTAGTGCGA Coding sequence (CDS) from alignment at sc0000460:124071..135036+ >TCONS_00023714 ID=TCONS_00023714|Name=TCONS_00023714|organism=Clytia hemisphaerica|type=CDS|length=3450bp|location=Sequence derived from alignment at sc0000460:124071..135036+ (Clytia hemisphaerica)
ATGACattatttcattttggtaaCTGCCTAGCATTGAGCATCGGACCATA
CTTCCTTCTATACAAATCTTCCGGATTGTCGGAATACCAGACGGTATGGA
AATTAGCAAAAGCCGGCTCTGCTTATTTCCTGACACAGCTATGTAAGATG
TTGGTACTGGCGACATTTTTCCCGATGAGTGAAGGAACACAACAACCACA
AATGGATGTTGTGGGAGAATTCATGAAATCCACCATGGACTTGAGTGATC
TGTTAGGCCTTCACCTCTTGATGCTTCGAATCCCTGGTCGTGGAGAAATG
AAAGTATTGGTTGCTGGCCTTGGTTGGGCAACAGCAGAATACTTGACGAC
CAAATTGATTCCACTTTGGGTTGGTGCAAGAGCTATTGAGTTTAATTGGA
TACACACACAACTTAGTTTTGATGCCAATATCAGTCTTATTTTGTATTTA
TCGGTAGCAGCGCTGATCTGGTTATGGTCACGAACAGACTTACAAAAAAT
GTATACACCTGTTGTTTTCGTACTGCTCATGTTCTGCTCATACAGACCTC
TCGTTTTAGAAATCGTTTCTTTCGCATTCGGATTATCGTCATGGAACCTG
CTCTTCTTCAAAGCCATCTACACCAGTGTCATCGGAGCCATCACACTCCA
CATCTATATCGGACTCGTTAAAACATTGAAGACCTATTAAATGACattat
ttcattttggtaaCTGCCTAGCATTGAGCATCGGACCATACTTCCTTCTA
TACAAATCTTCCGGATTGTCGGAATACCAGACGGTATGGAAATTAGCAAA
AGCCGGCTCTGCTTATTTCCTGACACAGCTATGTAAGATGTTGGTACTGG
CGACATTTTTCCCGATGAGTGAAGGAACACAACAACCACAAATGGATGTT
GTGGGAGAATTCATGAAATCCACCATGGACTTGAGTGATCTGTTAGGCCT
TCACCTCTTGATGCTTCGAATCCCTGGTCGTGGAGAAATGAAAGTATTGG
TTGCTGGCCTTGGTTGGGCAACAGCAGAATACTTGACGACCAAATTGATT
CCACTTTGGGTTGGTGCAAGAGCTATTGAGTTTAATTGGATACACACACA
ACTTAGTTTTGATGCCAATATCAGTCTTATTTTGTATTTATCGGTAGCAG
CGCTGATCTGGTTATGGTCACGAACAGACTTACAAAAAATGTATACACCT
GTTGTTTTCGTACTGCTCATGTTCTGCTCATACAGACCTCTCGTTTTAGA
AATCGTTTCTTTCGCATTCGGATTATCGTCATGGAACCTGCTCTTCTTCA
AAGCCATCTACACCAGTGTCATCGGAGCCATCACACTCCACATCTATATC
GGACTCGTTAAAACATTGAAGACCTATTAAATGACattatttcattttgg
taaCTGCCTAGCATTGAGCATCGGACCATACTTCCTTCTATACAAATCTT
CCGGATTGTCGGAATACCAGACGGTATGGAAATTAGCAAAAGCCGGCTCT
GCTTATTTCCTGACACAGCTATGTAAGATGTTGGTACTGGCGACATTTTT
CCCGATGAGTGAAGGAACACAACAACCACAAATGGATGTTGTGGGAGAAT
TCATGAAATCCACCATGGACTTGAGTGATCTGTTAGGCCTTCACCTCTTG
ATGCTTCGAATCCCTGGTCGTGGAGAAATGAAAGTATTGGTTGCTGGCCT
TGGTTGGGCAACAGCAGAATACTTGACGACCAAATTGATTCCACTTTGGG
TTGGTGCAAGAGCTATTGAGTTTAATTGGATACACACACAACTTAGTTTT
GATGCCAATATCAGTCTTATTTTGTATTTATCGGTAGCAGCGCTGATCTG
GTTATGGTCACGAACAGACTTACAAAAAATGTATACACCTGTTGTTTTCG
TACTGCTCATGTTCTGCTCATACAGACCTCTCGTTTTAGAAATCGTTTCT
TTCGCATTCGGATTATCGTCATGGAACCTGCTCTTCTTCAAAGCCATCTA
CACCAGTGTCATCGGAGCCATCACACTCCACATCTATATCGGACTCGTTA
AAACATTGAAGACCTATTAAATGACattatttcattttggtaaCTGCCTA
GCATTGAGCATCGGACCATACTTCCTTCTATACAAATCTTCCGGATTGTC
GGAATACCAGACGGTATGGAAATTAGCAAAAGCCGGCTCTGCTTATTTCC
TGACACAGCTATGTAAGATGTTGGTACTGGCGACATTTTTCCCGATGAGT
GAAGGAACACAACAACCACAAATGGATGTTGTGGGAGAATTCATGAAATC
CACCATGGACTTGAGTGATCTGTTAGGCCTTCACCTCTTGATGCTTCGAA
TCCCTGGTCGTGGAGAAATGAAAGTATTGGTTGCTGGCCTTGGTTGGGCA
ACAGCAGAATACTTGACGACCAAATTGATTCCACTTTGGGTTGGTGCAAG
AGCTATTGAGTTTAATTGGATACACACACAACTTAGTTTTGATGCCAATA
TCAGTCTTATTTTGTATTTATCGGTAGCAGCGCTGATCTGGTTATGGTCA
CGAACAGACTTACAAAAAATGTATACACCTGTTGTTTTCGTACTGCTCAT
GTTCTGCTCATACAGACCTCTCGTTTTAGAAATCGTTTCTTTCGCATTCG
GATTATCGTCATGGAACCTGCTCTTCTTCAAAGCCATCTACACCAGTGTC
ATCGGAGCCATCACACTCCACATCTATATCGGACTCGTTAAAACATTGAA
GACCTATTAAATGACattatttcattttggtaaCTGCCTAGCATTGAGCA
TCGGACCATACTTCCTTCTATACAAATCTTCCGGATTGTCGGAATACCAG
ACGGTATGGAAATTAGCAAAAGCCGGCTCTGCTTATTTCCTGACACAGCT
ATGTAAGATGTTGGTACTGGCGACATTTTTCCCGATGAGTGAAGGAACAC
AACAACCACAAATGGATGTTGTGGGAGAATTCATGAAATCCACCATGGAC
TTGAGTGATCTGTTAGGCCTTCACCTCTTGATGCTTCGAATCCCTGGTCG
TGGAGAAATGAAAGTATTGGTTGCTGGCCTTGGTTGGGCAACAGCAGAAT
ACTTGACGACCAAATTGATTCCACTTTGGGTTGGTGCAAGAGCTATTGAG
TTTAATTGGATACACACACAACTTAGTTTTGATGCCAATATCAGTCTTAT
TTTGTATTTATCGGTAGCAGCGCTGATCTGGTTATGGTCACGAACAGACT
TACAAAAAATGTATACACCTGTTGTTTTCGTACTGCTCATGTTCTGCTCA
TACAGACCTCTCGTTTTAGAAATCGTTTCTTTCGCATTCGGATTATCGTC
ATGGAACCTGCTCTTCTTCAAAGCCATCTACACCAGTGTCATCGGAGCCA
TCACACTCCACATCTATATCGGACTCGTTAAAACATTGAAGACCTATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00023714-exon-sc0000460-1491911889:124071..124603 | TCONS_00023714-exon-sc0000460-1491911889:124071..124603 | Clytia hemisphaerica | exon |
| TCONS_00023714-exon-sc0000460-1510915933:124071..124603 | TCONS_00023714-exon-sc0000460-1510915933:124071..124603 | Clytia hemisphaerica | exon |
| TCONS_00023714-exon-sc0000460-1575043694:124071..124603 | TCONS_00023714-exon-sc0000460-1575043694:124071..124603 | Clytia hemisphaerica | exon |
| TCONS_00023714-exon-sc0000460-1491911889:131716..131960 | TCONS_00023714-exon-sc0000460-1491911889:131716..131960 | Clytia hemisphaerica | exon |
| TCONS_00023714-exon-sc0000460-1510915933:131716..131960 | TCONS_00023714-exon-sc0000460-1510915933:131716..131960 | Clytia hemisphaerica | exon |
| TCONS_00023714-exon-sc0000460-1575043694:131716..131960 | TCONS_00023714-exon-sc0000460-1575043694:131716..131960 | Clytia hemisphaerica | exon |
| TCONS_00023714-exon-sc0000460-1491911889:132173..132288 | TCONS_00023714-exon-sc0000460-1491911889:132173..132288 | Clytia hemisphaerica | exon |
| TCONS_00023714-exon-sc0000460-1510915933:132173..132288 | TCONS_00023714-exon-sc0000460-1510915933:132173..132288 | Clytia hemisphaerica | exon |
| TCONS_00023714-exon-sc0000460-1575043694:132173..132288 | TCONS_00023714-exon-sc0000460-1575043694:132173..132288 | Clytia hemisphaerica | exon |
| TCONS_00023714-exon-sc0000460-1491911889:133158..133279 | TCONS_00023714-exon-sc0000460-1491911889:133158..133279 | Clytia hemisphaerica | exon |
| TCONS_00023714-exon-sc0000460-1510915933:133158..133279 | TCONS_00023714-exon-sc0000460-1510915933:133158..133279 | Clytia hemisphaerica | exon |
| TCONS_00023714-exon-sc0000460-1575043694:133158..133279 | TCONS_00023714-exon-sc0000460-1575043694:133158..133279 | Clytia hemisphaerica | exon |
| TCONS_00023714-exon-sc0000460-1491911889:133988..135036 | TCONS_00023714-exon-sc0000460-1491911889:133988..135036 | Clytia hemisphaerica | exon |
| TCONS_00023714-exon-sc0000460-1510915933:133988..135036 | TCONS_00023714-exon-sc0000460-1510915933:133988..135036 | Clytia hemisphaerica | exon |
| TCONS_00023714-exon-sc0000460-1575043694:133988..135036 | TCONS_00023714-exon-sc0000460-1575043694:133988..135036 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000460 | supercontig | sc0000460:124071..135036 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR019164 | DUF2053_membrane |
Blast
BLAST of TCONS_00023714 vs. Swiss-Prot (Human)
Match: TM147 (Transmembrane protein 147 OS=Homo sapiens GN=TMEM147 PE=1 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 3.174e-62 Identity = 109/224 (48.66%), Postives = 149/224 (66.52%), Query Frame = 1
Query: 457 MTLFHFGNCLALSIGPYFLLYKSSGLSEYQTVWKLAKAGSAYFLTQLCKMLVLATFFPMSEGTQQPQMDVVGEFMKSTMDXXXXXXXXXXXXRIPGRGEMKVLVAGLGWATAEYLTTKLIPLWVGARAIEFNWIHTQLSFDANISLILYLSVAALIWLWSRTDLQKMYTPVVFVLLMFCSYRPLVLEIVSFAFGLSSWNLLFFKAIYTSVIGAITLHIYIGLVK 1128
MTLFHFGNC AL+ PYF+ YK SGLSEY WK +AG Y QLCKML LATFFP EG D +GEFMK+++D++DL+GL+L+M R G+GE K++VA LGWATAE + ++ IPLWVGAR IEF+W + Q+S D+NISL+ Y+ +A +W+ +R DL + P V +L+ Y+ V+E L SW L +A+ T ++ TL +Y+ +V
Sbjct: 1 MTLFHFGNCFALAYFPYFITYKCSGLSEYNAFWKCVQAGVTYLFVQLCKMLFLATFFPTWEGGIY---DFIGEFMKASVDVADLIGLNLVMSRNAGKGEYKIMVAALGWATAELIMSRCIPLWVGARGIEFDWKYIQMSIDSNISLVHYIVASAQVWMITRYDLYHTFRPAVLLLMFLSVYKAFVMETFVHLCSLGSWAALLARAVVTGLLALSTLALYVAVVN 221
The following BLAST results are available for this feature:
|
