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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00023749 ID=TCONS_00023749|Name=TCONS_00023749|organism=Clytia hemisphaerica|type=transcript|length=1780bp
GAATTAGCAGCTGAATTTTTAGCTAAGCgtcattttgaagaaatttcgac
aGGAAGTGACCGTGACCCAGACAAACCAGCAAACAGACAAAAGATGGAAA
AgatatttcatgaaaaacaaGAAGGCTCGCTATGTGCTCAGCACTGTTTG
AATTCACTGCTACAGGGGGCTTACTTTGATGCAGTTAGCTTATCATCAAT
TGCTCGAGAGCTGGATGAAGCAGAACGTCAAACAATGGCAATGGGTGGAA
ATGTAAATTCACCAGAATATTTAGCTTTCCTTCAACAACCATCATCAAAT
TATGATGACAGTGGATATTTTTCAATACAGGTTATTTGTAAAGCACTTGA
ATTATGGGGACTTCAAATGATGCAGTTTAATAGTCAAGCTGCTGCTGAAA
CTAGACGGAATCCTTTAGCAGAAAATGCGTACATTTGTAACCAGTCGAAT
CACTGGCTGACTATTAGGAAGTTTGGAAAACAATGGTTTAATTTGAATTC
TGTTAAAATGTGCCCAGAACTTGTTTCAGATACATATTTAAGTTTATTGC
TAGCACAATTACAGCAAGAAGGATATTCCATTTTTGTAATCAAAGGCAAA
TTACCGGACTGTGAAGCTAACTTATATTTACAACACCATAATGTAACCCA
GGCTGAGTTTAGAGCATTTGAAGATACATTCCGTAAAAAACCAGCAAACA
AAAAGACTGAAAAACAGGTTGAAGAAGTTGACACAATGCCGGCAAAACCA
GTTGATGTCGAGGACGTTAGAAATAAAAGATTAAATTTCTTTctaaacaa
acaacaacaacctgACAAAGACACTTCTACACCTCCTAGTGGTACAGTGA
GTGTTTCTGATAATCTTCCTTCAGAAAATCCAGGTAGTGCCAAGAAACCT
ACAGAGGATAATGAGCTGACTGAGGaagaaatgatgaaaatagcAATGCA
AATGTCCATGGAAAATGTATAAACCAACTTGAAcacgaaacacgtttttt
tatttttccgtttatttttttttgtttttctcatcTGAAATTACACTTGC
AGCCTCATCCAGTGTGTCAGAAGTATCATTTTGTCTATATAGAAGAATTT
TGGTAACTCTTGATctttatttattcctatttcaATCTAAGAACAAAAAA
GGGCACCTTCTATAAaagtttgttattgttgttattattgAACCATAGTG
TAAAAAGAATAGTATtttactagacggttcccgtcgtcgcaaacgccggt
taacggttttgcttgcacatcaaaagcctttaaaatactataatgtgggt
taattcctgacatcgttttggcttaaaatgccgccgaatacaataataga
aattatacttctaagctttctacattagtcaaaattttgggtctgaagcc
tcgatgatatgtctttttaagataacggaagtttgtgttcaatgaaatgc
catagtgaccctgtcaaaattatcgagggtacccgtcgttgcagacgccc
aaaggtgtctgaggtggtgagagggttgcttctaggaaagaaaaagcctt
agttgtgaaggagaggctcgcgctttgcggttgagcactgaaggttttcc
cgtttgttggcttcacatgaagacagcttaagaccggcgcatatgccatg
caaccaacattgaaacctttttaaataatgttagacgaagtttaatcatc
aaacaacaatgttggattttgttgcgtgtgttgatataaaataattcgaa
atcgtgcaacaaaaatgccacaccttttta Run BLAST on NCBI transcript from alignment at sc0000461:127670..144848+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00023749 ID=TCONS_00023749|Name=TCONS_00023749|organism=Clytia hemisphaerica|type=transcript|length=17179bp|location=Sequence derived from alignment at sc0000461:127670..144848+ (Clytia hemisphaerica)
GAATTAGCAGCTGAATTTTTAGCTAAGCgtcattttgaagaaatttcgac
aGGAAGTGACCGTGACCCAGACAAACCAGCAAACAGACAAAAGGTATCAA
CTTTTCAATTTGAAGTAGATTATTTGACAAATTGGTAAGAAAGGGATGTT
TCATATTTTGAATTTatatagagaaaaaaaaaagagactGTTCTGAATTA
AATATTATCCCCTTCTCAAAGGGTTGGCAGCTGCGCAGACGATTCGATAT
CATCCACCGCCACCCAGTGGTTTTTTCAAGCACCCAAATGCCTCCGTTAG
ACGGTGGCATTAAACTGAAttcaaattgaattttaaaaactcaatttgaa
agaaaattttaagtttattattttcttttacaagaaaaaagtaaaagatc
aaatttaacCATATAAAACACTTTATAAGTCTCTCTTCTCCTCTTTTAAA
CCCATTAAAAGGATTAAAATGAATGAAACCCCATAGTTACTCAGTTATCA
CAGCTGCAGTTGATTCTTTTAATTGAGTTTTATATATCACCCGTCTCCTT
TATTgaagatgaaattgaaattattctttattttcaataaaggaGACGAT
TTTAATTGAGTTTAATCTGGTTTAAATTGCTGCCAAAATgtaaaaacttg
ttttcaaaTGAATGTATTAACCAGTATTTATGGTTGCGGTCACATCAGAA
AATTTGACTTTCCGTAACTCATATcaccatggttacttttgtaaAAATGC
CCTCTCAGGAATTTCCGCTACTAAATAACAGAAGAATTTTTGGTGTCTGG
TGTTTGCACGCGATCTATGTTCATTCAAACTTGtgtgagaacaatagaaa
ttttacGGTAAAATAAGGGGAGCCCATGGGCAACCCTTATTTTAACGTAA
CTCCGAAAACAATAGTTTTTAAATAATAGCTATTTCAAAATCCAAGTTGC
TTAACAAAAGGCTtgttaagtaaataaaaggatTCCCGAGCTTTCTACAC
ACAATCGGCATTTATTTTCgacacaaaaaaaactttgaagagagagagag
agatgtTGTTGAAAAATATCTGTGTTATTTGACGCTAGAGCTGCATTGAG
AGAAGAAGTGGAGAGATAAAATGGAGAGGTTTCCTGTTGGATTTTACCCG
CCCTACATGCAAACACAATTCTACCCACCCTTCTATTCACAACAGCACCA
GCAGCAACAAGTTTTGCAAGTTCCTGATCAACAACATCAACAAGGTGCAA
AACAACAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCTGCTCCT
ATTTTCCTACCACACCCCTTTATACACTTCTCTCTCTTCTATATATAGAC
TGTAAAAAtgtaaagaaggaaaaaatgtctggtaaagtttttcttctttc
tcttccTTTTGTTAGTAGAGGGGTACTTTATTGTTTCAAGCCCTATTGTT
AAAAGTTGCggtaaaattataaattttccaaTCTGACCGCAACCTATGAC
TTTtcaacattacattacatttacattcttttatcttttgaaacatCTTA
TTTGGAACCTATTTTCTTATTGTTTTTGTACAGATCTATATTTTTCATTA
GCTCATTCAATTTAAAAGTTCATTCAATGCCCCACTTCCTTTTTTGGGTA
TTTATTTTATCCTGTTTTACTAATAGTGGTTCTATTATTATATCATTTTG
tagttcattttttaattttccaaaatgtgaaatttttcatcatcttctca
tttaaaaagagctatgatttagatattttcaGTAATTTAATTAACTTTGA
TCATTGATAAATTCTAGGTATACATTCAACTTTTGCTGATTCAAAGTGCC
AGTTGTGACAAAATTTGCtcagctttttgaaaaatcacacTCTTTTGATC
ATTTGGCAGCAGTTCTTTACATCATTTatagtttttttaatttgttgttt
gaATATGAGTTCAAGTTAAATTTAACAGTTTGAGAGGACTTTTAAGGAAT
TCATTCATTTTGTTCGTTGATAAATTTNCAGTTCTTTACATCATTTatag
tttttttaatttgttgtttgaATATGAGTTCAAGTTAAATTTAACAGTTT
GAGAGGACTTTTAAGGAATTCATTCATTTTGTTCATTGATAAATTCTAca
aattcattcaattttaactgttttaaagtGCTAGTTAAGACAAAAATATG
CTCAGATTTCAGGGCCTTTGCCTCTTGAACCCCCACCAGGGCTAGCTCTG
GACCCACACAGCCCCCAGCCTCTGTTATCCAGACGAAGGCTGGATAGCGC
GGCTTACGCCTTCgttaaaaactcaatttgaaagtaCAAACGGAGGCATT
GCTTAGTGCTTGAAAAAAACCCTGGCCACCCCACGCCACACCACCAGGAc
caggcagttacatcaatatgccttcttcctgtctttaaaaatataaataa
aagtaatcacggaaaaggacgcgaaaaaaaaagacataagtgtgagaaca
gagtaatcgaactcgttagaaaaagtaccattagaagtcataaaaaatca
acctgaataaatgcaatcgaaattccagacagCCCTGGGAATTGCTGGTA
AAAGCTGCCGTAAATTTGATTATTCCTTGTTTGCTGCGGCAAAATTTTGC
CACGGTAAATTTTCTGTCAAATgttaataaaatcaaagaaacttCAAAAG
TGCCAAATCGTTTAAGTTCTTTGTTTTCTGATAATATAGGAGAGGTCTAG
TACTTTGGATGATGACATCTGTATAGGATTTTCTCAAGTCAAACttcaat
aaacaaaaaaatgccacGGCGAAATGCTGTTTTGCCTCGGCAAATTTGTC
GCAGCAAAAAAATACCAAGGCAAAAAAAGCTGAATTGCCAGGCAGGGCTG
CCAGAGAACTTCaaaattccccaaacaacattacattacattactcccat
cacataaattttacaattacgtcagagtagactacgctcgccaccgaaga
ggtttatttggaaagggtaattatattttattgNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNtttttaaagattcgccgggttggaaaagtatgaat
ttctttgtatatattttacctaccccaaatatttaggaggctgagtttta
aacgaatcgttgagttgaaacgaacgataaatgtatcaaggtctgtttta
tttacggACATGTTCATAAATGATGAGTAAATATTGGCCTTTTGGAGACA
TTTGAAATGACTGTTACAATTTTACtcatgataaaaatgtaacaaaattt
cAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTAAC
AAAATTTCAGAGGTCCTAGCTGCTGCAGTGGTTAAGCTATATAGCTGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNAAAAAGTAACAAGCAAGAAATAaataagatgataaaaatggC
CATAACTCATGAAATATGTATTGTAAAGATGTGAAAATGTTACACATCAC
AGGTCAGGCCTAATTTAACTTGAGTCCCGCTCGGGACTGTCCCGATCTAG
AACAACGTGGTAAAGAAGTCGAAATcgatgagaaaaaaaattgatcgatg
gtttgatttatactatatatacttttacttgagtcccgattTTGCGTACA
AAATGTTTGGATTCGGGACTAAATTAAAATTCCCGATTTGGCCTACGAAA
Tggttgaattcgggactcaagtaaaagtatatatagtaacgagaaacttt
tagtccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNGAATTGGTCTACGAAAAggttgaattcgg
gactcaagtaaaagtatatatagcaacgagaaacttttagtcccgattta
cTTTACGAACATATTGGATTCAGGACTCAATTAAAACTATATATAGCaac
gagaaatttttagtcccgatttactttacgaacatattggattcgggact
caaTTAAAACTATATATGGCAACGAGAAGTTTTTAGTCCCGATTttcctt
atttcaaaatttctaaagaaggcgaaaTACTATATTAGAACAAAAAATCC
AAacagtgtattccgccttctttaaaaaaatacccctTCGAATGTTTCtg
aagaaggcggaatacactactatacTATGAACTTACTGTCCTaaaacata
gtattccgccttctttaaaaaaataggctttcaaatgtttctaaataagg
cagaatacactactatggacttactgccctaacatagtattccgccttct
ttaaaaaaaaccctttcgaatgtttctaaagaaggcggaatacactacta
aggacttactgccctaacatagtattccgccttcttcaaaaaaatacccc
ttcgaatgtttctaaagaaggcggaatacactactatactatgaacttac
tgccctaacatagtattccgccttcttcaaaaaaataccccttcgaatgt
ttctaaagaaggcggaatacactactatactatgaacttactgccctaac
atagtattccgccttctttaaaaaaaccctttcgaatgtttctaaagaag
gcagaatacactactatggacttactgccctaacatagtattccgccttc
tttaaaaaaaaccctttcgcatgtttctaaagaaggcggaatacactact
atgaacttactgccctaacatagtattccgccttctttaaaaaaataccc
cttcgaatgtttctaaagaaggcagaatacactactttggacttactgcc
ctaacatagtattccgccttctatAAAAAACGTCTTATTTAAATGCGTTT
TCGAATATTTCtgaagaaggcggaatacactatgTATTTACTCTCCCATA
TAGTACTCTgccttccttgaaaaatacgttAATCAgcggggggcggctat
taggtacccgagagtattacaAACACGGacaatcatttcaaaaaatttaa
accgGTATAGTACTTTTCTGGGCGTGTTACAATGACGTTGAAATTGGGTT
CCGGCAAATTAGAATGGACTTATTTTAAACGCATAATAACGGAGAGAAGA
GGAAGAGAATCGATTCCAAAGAAAACCTAAAAAGGTATCTAGACATGAAT
GATTTATGGTTAAGTCAAATTCAACGAAAATCCCTTGTCTGAAAAGTCAA
ATCCCACTCGGGACTCAAGTCCAATTAGGCCACAGGTCATACATACACGG
ACCTTCATTTTGAGCTTCATGCATCAATGGCTGCTCATCTGATAAAAAAG
TAACATTTTAAATCCTTGAAATTGATACTTTTAAGAGCCCTTGAACCAAA
CAAAATcaaagtaaaattatttttctttagtgGTTTATTGAACAAAATAG
GTTGGAATTGTGCTTTATATATCATGAATTCCatatgtgactaacggaca
tttcCACTGTTTAGCAGGCTAGAAGTCAAGcttgaaaataggaataaaac
ttCTTTTGGTGTGGTAACTATCAGTGggggtcaaaatttcaagaaccata
taaaactttttttcttgacTTTTACTTGGTCAGAAATTGCAATTAATAGg
cccgtgactaacggacacaaaaattaacatctaaAATGGGACACTTTTAC
AAACAGCTGTAAAGTGGTGTTCCTAAAGCTACAGGTtgggttttttgctt
aaattcactagaggaaaggttgaattttatgtttcaaaattaattttgaa
aaaaaattgtcaaagtaAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTATATATGTTACATTTTTACATGA
TTGACATTAAAGAGGTTTCAGAGATGAATTTTATTTCTTCAGAAGGAAAG
TAACATACTAAAGCACTGGTTTTCATGTTAAATAAGTCAACAGTATTGGG
TCATTTATTGGtaataaagtaacaaaattgctattttttcgcaatttttc
ccagctttgttacaaatttatcatgtttttatcaACTTTTAAATAGGTAT
TGGATGGTTTTAGCTAGCCATAGAGTCAATGAATGGAAATAGTGACCCTT
CGTGTCCTCAAAAGAGTCTCAATTTGATAAATATGTAACAGNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NTGTTTGTTACAGATTTACCATTTTAAAACAGACAAAGAAAACATGACAA
TACAAAAGACATGATATTGGTCTTAGGGTCAATTTAGATTAAAGAAATAG
CATTCTTGTCACCAGTTAAATTTCTTTAATGGTCTTTCAACAACAAGTGC
ACACCTTGTCCGGTACTAAACAAGTTTGTGGTGTTACATTTTTACCCAAA
TGCagcatttttggaaatttaaagACATATTTTTGAAGGTCGCAAGCCTC
GTTAATATTTTCCCCAAAGGAGGGCCTTTTTTGGTGAGATTGACATGATT
AAAGTAACTTTAGGTACTATTTTTGCTATTTGCTAATACTGTTactattt
tatctttttcttggCCGTAGACCCTGTTACACTATTGCCCTTtatggatt
ttttattttctaatggATAAAACTaaccatttgaagaaaattgaacaatg
cAAACAACATTGAATTTCtttaatgataaaaaagttacaattgTTACATT
TTACCAATAGCAGGCCTTTGAACACATATTTTTTTCCAGCCCtgtgaatt
cagacaaaatcataTCGGCACTGAAGtgcttgtctgtacacaaacctaat
atctacggctaatttcaaaattcattgccgtagagggtctgttgtcattg
tcttttctggtttgagatttttcaaaccaactgCTACGATGGAGTGCTGC
TGGAGTTTGGCGAGAAATCGGAGGCGATAAGACAAAATGGCCGTCAGAGT
TGTCAGAAAGTATAGAAGTTTgtcgaaaaaaagtgttttcataacaaaac
tgacttctttattttttaataatttgaataaaagagagctctaaatgaag
acattctattgcaaaataactctttttgcacaaatcgaatgtttttacAT
TTTGGATATTTGAGTTCACGAACATGAGAGAGAAGTTGTTTGAttggaat
cttttttttaaagtggttttaacttcagttctttgcAAAAGAATATACTC
AGAGTATCTCTGCatgtttttatgttcaaattcagtattactTTTACGGC
ATTCGATCTATGTAGAGTGGctatagtttgttttgttggcataacttttt
taattaaaatgtttgtatttttatttGGCAGACTACATGGAAAAATAGGG
TAATTGGAAAgtaattttctgttagacaattttgaatatgtcttcgttac
ttttcagcttttagtttggctcaaaaacataaaaaaaagaaaccaaaaca
TGCTTAGAAAGTGACCCTCAATGGACCACATCCCTTTGTTTACAATTGTC
GTACTTTGGCGGCCATTTTATTTCAAAATTATACttcatcgcagaggtct
ccgtacggaaaaacttttatcaaacagacaatgcgcacagagtgaactac
gctacgataatcgtgagatacactctggtacagagcaaaattttgccgac
ctagacgtcattttaggtcggcaaagccgtCCTAAGTAGCTTGTTTAGGT
AGGCAAAGACAAAATAGGAAGAAAATTAACGAACTAACAAATTCAGCTGC
TCTATAATTGTGTTATtaaaagttttatgttttataaagagaacggaatg
aggctcgattatcatgtgttatcaaatgataacacaattagattaaccta
acaaataatatctttcctctttaggtcggctttgccgacccaaaacattt
cttttgtcggCACGCCGGCCTAGAGTGTATATTACGTCGCCAAATAAAAG
CCGACTTCAGCTCAAGTTACGTCGGCTTTCAAGTCGGCattgccgaatgc
cgacctggaTTCACAGGGCTGTTTTTCTGAAACCACTTCTAAGTTCTGCT
AAACAATAATTGTCACCCTTTCACAAATTTTGGAATCTCAAAATTGATTT
GTTACAAAATTATCCactttttactgatttttgccatttttcaaatgTCT
CCATTTTACTCACCATTTATGAACATGTccttaccccctggtgacttata
acacaagagacttaactcgatgttacaatccaattattgaaagtttgtct
cagcctttttataatgagcgagacatacgttctctgattatgcgattttc
atattgacattttcgaggcattttgatgtaactgccaggccaggatgcaa
gtgaaatttttcaatctgcagACCTAGCCAGGGGTTTGGTTATTattagt
tagggttagggttggagctcgagagtcacaataaaAGACCGAAGGCCTTC
ATTGGGGCATCCATACCCTGAGGcctaacagttagtcacactagcgtccc
gccaaaatgcatatcaaagattattgctgcgaaagcgctatatcattTAT
TTGACTCGCCAGCAAAAAATTAGccacaaaacttctaaagggatttatga
aaaaataacccggcgctttttgatgaaattaacattttcaaaaactatga
aaaattgcctaaaatttgagccatagatgaaaaaatttgagccaagccaa
ccttgaaaactaatttgaagatcaacttcccaagaaaaagatctatgggg
gagacggaacccacctagaccCGCGCACCGCCAGATAGGCtacttcccgg
aaattttgccggacttcaaacactgacccatttacatgtgcagaaatttt
tttactttagcgtataaacaaagccttaaaactcgaagcgctgtctcgga
aattgaatgacaaatggttggttgattttggctgctgcacgttttatttt
gtttcaaattttcaagttttaattaattgtcttgccaacttgattcaggt
aactctcatccttgttgttgcaaatagatcctgtagatgactgatgttgt
tttttctgaaagctagatttcctagtgtgactaactgcctaaCTTGGGAC
GactggtcgaaacatgggactgtttgttGATTATTCTGGCCAGGGGGGGC
AAGCAGTTAATACACAACACTATGTGTATTAACTGCAttctgaaattttt
caaaaggaccACCACCCCTTGACacttaccgtgagattgggtaacttgca
tcagtggaggctaacatgtaTAGCCNtgaaatttttcaaaaggaccACCA
CCCCTTGACacttaccgtgagattgggtaacttacatcagtggaggctaa
catgtatagccctcaaatgaaagacctggctgggtcattaaaatacaaag
ttaaatcaaaacaaaaatggtagatagGCCGTGGCCAGTGAGCCAAAgtg
tagttaatcgatataatcgataatcttgagtaatcgataaataatcgata
agtaatctatggattagatatcgattaaccgatagaatcgataggtaatc
aatactcaagattttttcaaagctcgattatttatcgatcaattttgtca
tcgattgtttatTGATTATACTTCattaaattaataaaaattgtgatcga
agataagtaaataattgataagtaatcaatgcacGAACGATAAATAATCa
atgattgttaacaatcgatacatgattgataagtaatcgataggttgtat
gtagtcgatatgtgattgattagtaatcgatagcttggaaataatcgatc
gctgaccgatactcaagattttttgaaggtctgattacttatcgattcta
tcggttaatcgatatctaatccatcgattacttatcgattaattatcgat
tactgaagattatcgattatatcgattaactacgcctggtatGTTTCcta
gtcaatttgagggtgctgatttggAATTTAAATGTTACCAAGCATGAAAC
CCCGCAGTTTTTGAGCaatatacaaaataaaacaatatctTCTTTCACAG
CTTCCCCACCATCtcgaccaaacggtggagagcatcaaaataatgcgcgc
gcattagttttacgaattacgggaaatgTGTATAtatttgcaaaaagttt
ttcacccaggatatttttattccaacccccctgcttattccaaacccccc
tgctattaggtacctgagagtaaaTAAGATTGGGAATAGTTTGTTTGTCT
CAGTAGAGTGTTGGCCTGAACTTTACATGccttcttcaaaaaaaaatctt
ttttctctgTCAGATTTTATCTGAATTTTTATTGCTTCAAAGGACACAAA
TGATTGATATCTTATCATTGTTGATTAACTATGCAAGTTTATTGAATTAg
caaccgtagtgcagtggtagagtaTCCAACTATGGCAGGCCATATTTTAT
AAAGGCAaggcagcgtccgttggtggccaaaaagggcatttTTCCCAGTA
TTTTTcaactaaaaaggctgtttttaccaatattttaagaatttcaagag
gggcatgaaaaatggcctgtaCGGTGAGCAAGGTTGTCGGTTCAATCCCC
AGCcaagtcataccaaagattctcaaaatggtactttaTGCCTCTCTGAT
TGATGCACAGCAATtgagagaaggatcaagggtaagtagaCCAATCCAGA
GAGAAAGTGTGGCGCCCTCCTCTACCCTCCggtagatagctatcaaaaga
ggagccttctGGTCGCCTCCGGTTGCAGACTTAATTACTTATTGAATTGC
TCTTTGTAACAATTGGTCAATTGGTCATCTCCTTTATTTCAGATGGAAAA
gatatttcatgaaaaacaaGAAGGCTCGCTATGTGCTCAGCACTGTTTGA
ATTCACTGCTACAGGGGGCTTACTTTGATGCAGTTAGCTTATCATCAATT
GCTCGAGAGCTGGATGAAGCAGAACGTCAAACAATGGCAATGGGTGGAAA
TGTAAATTCACCAGAATATTTAGCTTTCCTTCAACAACCATCATCAAATT
ATGATGACAGTGGATATTTTTCAATACAGGTTATTTGTAAAGCACTTGAA
TTATGGGGACTTCAAATGATGCAGTTTAATAGTCAAGCTGCTGCTGAAAC
TAGACGGAATCCTTTAGCAGAAAATGCGTACATTTGTAACCAGTCGAATC
ACTGGCTGACTATTAGGAAGTTTGGAAAACAATGGTTTAATTTGAATTCT
GTTAAAATGTGCCCAGAACTTGTTTCAGATACATATTTAAGTTTATTGCT
AGCACAATTACAGCAAGAAGGATATTCCATTTTTGTAATCAAAGGCAAAT
TACCGGACTGTGAAGCTAACTTATATTTACAACACCATAATGTAACCCAG
GCTGAGTTTAGAGCATTTGAAGATACATTCCGTAAAAAACCAGCAAACAA
AAAGACTGAAAAACAGGTTGAAGAAGTTGACACAATGCCGGCAAAACCAG
TTGATGTCGAGGACGTTAGAAATAAAAGATTAAATTTCTTTctaaacaaa
caacaacaacctgACAAAGACACTTCTACACCTCCTAGTGGTACAGTGAG
TGTTTCTGATAATCTTCCTTCAGAAAATCCAGGTAGTGCCAAGAAACCTA
CAGAGGATAATGAGCTGACTGAGGaagaaatgatgaaaatagcAATGCAA
ATGTCCATGGAAAATGTATAAACCAACTTGAAcacgaaacacgttttttt
atttttccgtttatttttttttgtttttctcatcTGAAATTACACTTGCA
GCCTCATCCAGTGTGTCAGAAGTATCATTTTGTCTATATAGAAGAATTTT
GGTAACTCTTGATctttatttattcctatttcaATCTAAGAACAAAAAAG
GGCACCTTCTATAAaagtttgttattgttgttattattgAACCATAGTGT
AAAAAGAATAGTATtttactagacggttcccgtcgtcgcaaacgccggtt
aacggttttgcttgcacatcaaaagcctttaaaatactataatgtgggtt
aattcctgacatcgttttggcttaaaatgccgccgaatacaataatagaa
attatacttctaagctttctacattagtcaaaattttgggtctgaagcct
cgatgatatgtctttttaagataacggaagtttgtgttcaatgaaatgcc
atagtgaccctgtcaaaattatcgagggtacccgtcgttgcagacgccca
aaggtgtctgaggtggtgagagggttgcttctaggaaagaaaaagcctta
gttgtgaaggagaggctcgcgctttgcggttgagcactgaaggttttccc
gtttgttggcttcacatgaagacagcttaagaccggcgcatatgccatgc
aaccaacattgaaacctttttaaataatgttagacgaagtttaatcatca
aacaacaatgttggattttgttgcgtgtgttgatataaaataattcgaaa
tcgtgcaacaaaaatgccacaccttttta
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00023749-exon-sc0000461-1491911889:127670..127762 | TCONS_00023749-exon-sc0000461-1491911889:127670..127762 | Clytia hemisphaerica | exon |
| TCONS_00023749-exon-sc0000461-1510915933:127670..127762 | TCONS_00023749-exon-sc0000461-1510915933:127670..127762 | Clytia hemisphaerica | exon |
| TCONS_00023749-exon-sc0000461-1575043694:127670..127762 | TCONS_00023749-exon-sc0000461-1575043694:127670..127762 | Clytia hemisphaerica | exon |
| TCONS_00023749-exon-sc0000461-1491911889:143162..144848 | TCONS_00023749-exon-sc0000461-1491911889:143162..144848 | Clytia hemisphaerica | exon |
| TCONS_00023749-exon-sc0000461-1510915933:143162..144848 | TCONS_00023749-exon-sc0000461-1510915933:143162..144848 | Clytia hemisphaerica | exon |
| TCONS_00023749-exon-sc0000461-1575043694:143162..144848 | TCONS_00023749-exon-sc0000461-1575043694:143162..144848 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000461 | supercontig | sc0000461:127670..144848 + |
Blast
BLAST of TCONS_00023749 vs. Swiss-Prot (Human)
Match: ATX3 (Ataxin-3 OS=Homo sapiens GN=ATXN3 PE=1 SV=4) HSP 1 Score: 256.529 bits (654), Expect = 8.594e-79 Identity = 122/186 (65.59%), Postives = 141/186 (75.81%), Query Frame = 1
Query: 94 MEKIFHEKQEGSLCAQHCLNSLLQGAYFDAVSLSSIARELDEAERQTMAMGGNVNSPEYLAFLQQPSSNYDDSGYFSIQVICKALELWGLQMMQFNSQAAAETRRNPLAENAYICNQSNHWLTIRKFGKQWFNLNSVKMCPELVSDTYLSLLLAQLQQEGYSIFVIKGKLPDCEANLYLQHHNVTQ 651
ME IFHEKQEGSLCAQHCLN+LLQG YF V LSSIA +LDE ER MA GG V S +Y FLQQPS N DDSG+FSIQVI AL++WGL+++ FNS R +P+ E ++ICN HW T+RK GKQWFNLNS+ PEL+SDTYL+L LAQLQQEGYSIFV+KG LPDCEA+ LQ V Q
Sbjct: 1 MESIFHEKQEGSLCAQHCLNNLLQGEYFSPVELSSIAHQLDEEERMRMAEGG-VTSEDYRTFLQQPSGNMDDSGFFSIQVISNALKVWGLELILFNSPEYQRLRIDPINERSFICNYKEHWFTVRKLGKQWFNLNSLLTGPELISDTYLALFLAQLQQEGYSIFVVKGDLPDCEADQLLQMIRVQQ 185
The following BLAST results are available for this feature:
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