TCONS_00023770 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023770
Unique NameTCONS_00023770
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length878

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023770 ID=TCONS_00023770|Name=TCONS_00023770|organism=Clytia hemisphaerica|type=transcript|length=878bp
ggtaaatattcatcttaaaaaaaaattatggcaGAAAATTCACTCAATAA
CATCAACATTATCAGACAAATTCAAGGTCAAGTATCAAGTCTTGATGAGT
GCAAAACCAAAGAAGATATTTCAAACCATTGTCAAAGTCTAATGAAGTCT
TTAGAAACAGTTCAAAATGTTATCAACACAAAGAATGAGGGTCAACTACA
AATTTTACATGAAACTGGATTAAAACTATGGAATTTAGTGGTAGCAAAGA
AACTAAATAAGCTAGTTGAGCGTGTTGCAATTGCTCAGGCTAGATATGTT
GCACTTCAGTTGACGTACATGGTCGCCCTGGGTGAACATTCAAAGACAAC
TTCCAGGAAACAACAAACAATGGCAATGAAAGTTGGAAAAGATTGGTTAG
AATGTGGCAATAGTTCTTATTCAGAAGCTTGTTTTATCATCAGCACAGAA
TGCTACATCAAGCTAATGAAATTGTTGGAAAATGGCGAATCTGAAACACA
TTTGAGTATTACTGAAGAACAAATTAAACAATGTCATGCACAAATGATGC
AAGTCTTCTTGTTCAGGGCAGAGTTGGCTTTACGAAATAGTCAACATGCT
ACTGCAATGGACTTTGCAAACAAAGCCAAAGAACTTGTTTTCAAAGAACA
GTTAAAGgcTGATTCTTTGTGTACAGCTTCATACAACTTTGGTTTGGAAT
GCTATCAGAAAGAACTCTATAATTATAGCAAAGAATGGCTAAAACAGTCC
ATTGAAATTGGGAAAGAAACGCCAACTGTCAAAAGCGAACAACAGGCTTC
GTCACGTCAACTGCTTGCTCTTGTGTATGTAGAACTGAAGGGTGATGATA
ATTATGCAAACGCTTTAAATGTCATTGG
Run BLAST on NCBI

protein sequence of TCONS_00023770-protein

>TCONS_00023770-protein ID=TCONS_00023770-protein|Name=TCONS_00023770-protein|organism=Clytia hemisphaerica|type=polypeptide|length=283bp
MAENSLNNINIIRQIQGQVSSLDECKTKEDISNHCQSLMKSLETVQNVIN
TKNEGQLQILHETGLKLWNLVVAKKLNKLVERVAIAQARYVALQLTYMVA
LGEHSKTTSRKQQTMAMKVGKDWLECGNSSYSEACFIISTECYIKLMKLL
ENGESETHLSITEEQIKQCHAQMMQVFLFRAELALRNSQHATAMDFANKA
KELVFKEQLKADSLCTASYNFGLECYQKELYNYSKEWLKQSIEIGKETPT
VKSEQQASSRQLLALVYVELKGDDNYANALNVI
Run BLAST on NCBI

transcript from alignment at sc0000461:232277..237836-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023770 ID=TCONS_00023770|Name=TCONS_00023770|organism=Clytia hemisphaerica|type=transcript|length=5560bp|location=Sequence derived from alignment at sc0000461:232277..237836- (Clytia hemisphaerica)
GGTAAATATTCATCTTAAAAAAAAATTATGGCAGAAAATTCACTCAATAA
CATCAACATTATCAGACAAATTCAAGGTATGTTAATATTATTTAAATTCT
AACTGTCTTTTTAACTTTTCACAATGTTTTAAAAAATATACAGTTTGAAA
ATTGTTCTGCTTACCACACTACCTTATTAATTAGATGGAGCTAAAATTTT
ATACATCTTTTTTTTTGCATTACAAACTATATTTGAAAACTACATATTTG
CATTTTCAATTCTTTTTTTTAAAAGTCGTTAATTTTTTGCAGGAATTGAA
TTTATGAATGATCAAATTGTATGTTGATTTAGCAAGACACAGAAAAGCAA
AAATCTGTTCTTACAAATATTTGGCAATTAATTTTAAAGATTATCTTTAA
AACTAGGAATGTACAACGACTGTATTATTATATCTTCTAGATTTAGTTTA
AAACTCCTCCAAGAAACACCAGCCTGCTTTCCAGACTGGCTCTGGAGAAT
GTCAAAACTAAAAGTATTCAATTTATTTGGAATTTAGGTCAAGTATCAAG
TCTTGATGAGTGCAAAACCAAAGAAGATATTTCAAACCATTGTCAAAGTC
TAATGAAGTCTTTAGAAACAGTTCAAAATGTTATCAACACAAAGAATGAG
GGTCAACTACAAATTTTACATGAAACTGGATTAAAACTATGGAATTTAGT
GGTAGCAAAGAAACTAAATAAGCTAGTTGAGCGTGTTGCAATTGCTCAGG
GTATGTTTATTTGATTTCACCAAGCATTTTAAAGACTTCTTTAAAAGTAA
TAAAACGTAAATCAGGGTTTAAAAAATGAAAAAATCTTTTCAAAGAAGCT
GTAAATTGCAAAGTTCTATATTTTTACAAAGTTGTGTTTATGAAGGGTAT
ACTTTTTCAGCAAGTTGTTTTGCAGTTGTTTAACTATTAATTCAAAACCT
CACTTTTTTCCAATTTTTGTTCCTTTTCCACTTCAGCTAGATATGTTGCA
CTTCAGTTGACGTACATGGTCGCCCTGGGTGAACATTCAAAGACAACTTC
CAGGAAACAACAAACAGTATTAAATTATTGATATCCAACATAATTCGCTT
TATCCTAAATAAATTCTAGTAAGAGATATACTTAAACCTCCTTAGCCAAC
AATTTGAAACTTACGCCATTAGTAGAACATTGTAATGACTTCAACATTTC
AATGATACTGCCCAGGCGAAATCGTACAAATTACATATTTTTGATATTTG
GGTTTGGTTGAAGGTTATAGTATAGGTTATATTTTACGAGTTTCAAAATC
AATTTACCATTTATAGTATCTACAACACATGTCACTATGCTAAATGTAAG
ATACAAGTATTGTGTATGATTTATTCTTTTGTTATTAGATGGCAATGAAA
GTTGGAAAAGATTGGTTAGGTAAAATCTGTTCTCCTTATTATTTTTCAAA
GATTTGAGTTTGCTCTAGTGGAAATGGTTTAAGGAAATTCTTTTTCAGAT
TTTCTGATAAATATCATCTAAAAATACCTACATAAAGACTTTTATTCACA
TGATCCCTTGAATGGGTCTGATGTCTGGTGTCTGGTGTCTGGTGTAATTT
TTTCAATCTTGAACAATTTTTATATAACTTTCTTTTTTAGTTGTAGATTG
CTCAAGCAGCACCAGTTAAGAAAAGATTCAGAATTGATAGACCAAAAGAG
TTAATAGTTTCTAGATCTTTCTAGTGATTTTTGAAGTTAAGCTGTCTCAT
TTTGTCATTTGTGTTAGATGGCTAGTATTTAGCATTAAAAAATCTTTGCC
TTTTATTTTTAGAATGTGGCAATAGTTCTTATTCAGAAGCTTGTTTTATC
ATCAGCACAGAAGTTAGTATCTTTTAAATGGAGATCGTTAGAATTATTTA
GTTCTGGTTAGAAACACTTCCACCATAAGATATCTTAGTTTTGGTCAGAT
TACTACTACATTCTGCCAAATGAAAGGTGCTTTTGGAAAGAAATTTCATT
TGCTCTTATCATTACAGTTTATCCATATTGGAAATGAAGAGCTAGCATTT
CCAAACAGTGTTTTGTTCAATCTTGAAGCAATGCAGTATATTGTAGATTT
TGTATCAATGAATTAAGTTTATTTATTGTTTCTTCCAAATATTTTTTAAT
CAGACGAAATTTTGATATTCTCCTTTTTGCAGTGCTACATCAAGCTAATG
AAATTGTTGGAAAATGGCGAATCTGAAACACATTTGAGTATTACTGAAGA
ACAAATTAAACAATGTCATGCACAAATGATGCAAGTCTTCTTGTTCAGGG
CAGAGTTGGTAAGGAAACTTCCGATATTTTTTAAGAAAAATACAGATATC
AGCAGAAAAATAACTTTTTCTCTACTTTTGATCCCATTTTCATGTTCACT
TTTTGTGCTTAATCTACTGGGCGAAGAGTTTCTTCATTCAAAAGATTTTA
AAAATCTACATACTTGTAAAAGGGGTGTATGAAAAAAAATTATCACCTGT
TCAGTCTAGTACATAGCAACCTAAAAAGTCATGATCTCCTCATTACTTTT
TAAGGTGAGTTATGGCCCTTTTTTCCTGGATTTTAATGATATTTTTCCGT
CTTTTTTGGTCTGGCAGTAGAGTTCCAAGCCAAATGCACAACCTTTCCTA
GGCAGGCAAATGTGAAGTCTTAACCCTATTCGTCCTAGAGGGGGCTGTTT
CTGTTCGGGGGCAAAACTAATGTTAATAACTCCTGAAATAATAGAGCTTT
TGGCATGAAATTTTCTGTAAATTCCTAACTTTTATTCAGCTTCAAACTAA
AAAAAAAATTGACGCCTAAAAATTTTCACACCTTGAGCATGATAACATTT
CTGACAGTAAGGTGTCACAAAAATCGACACATAATTCCAATACAAATTTA
ATTTTTATTTCAAATATATCGTTTAAACCGTAATTTTATTGAATATTTAG
GATAAAATAAGCATTTTAGAATCAGGGAACTTTTTTCTAAAGCCTTTGTT
GAATACAATAGCTATTTATAAGCACAAAAGACATTTTCGGTTTTTACTCA
CTTTGGGCATGATGAGTGACGTCATCAAAAAAATTTTTTGTCAAAAGTTA
CTTTACATGACAAGAATCTTGTGTGCTAAATTTCATCGAAAAAGACCCAC
TAAATCAAAAGTTAAGGAGTGGTACAGGAAAAATCCCCCCTAGTTTTGAA
CCGCCCCTAAAAACCTAGTATGAATAGGGTTAAGACTTGCGTGCAAATTC
GAATTACAGATTGAATCTATCATCTGTTTTTTTGCATTTTATATTTTTTG
AATACCTGCAGTAAATTTTACTTTCAATCCAGCATTTGCATGAAAATCCT
GCAACTTCTGTAGGAAATGAGTAGCTTCTATCTAATCCTACATAGATTCG
TCTCTAGTCTTATTTATTTGCCTCAAAAGCTCTTTTAACTTGGTAGAGTA
TTTATTTTATCGAATTTCCTCATTGAGTACGGTAACTTGCCTATGAGAAA
CTTTTACAGAATCTTTTTAATGATTAAGATGAGTTACTACACAGCGTTTG
ATCACAGGAAAATTGTTCCATAAAAGTTATCTTCTTTCATTTCATAGGCT
TTACGAAATAGTCAACATGCTACTGCAATGGACTTTGCAAACAAAGCCAA
AGAACTTGTTTTCAAAGAACAGTTAAAGGTACCAAAGCATACATTATTTA
GATTTTAAGATAGAAAAAGATATCTTATAAGCGTCCTCTTAACTCATCAA
GTGCTACTGATGTTTGTCCACTTCAATTATTCCTTTTTTTACGGTAATCT
ATGCAATTCTTGTAATTTCTAACAAATGGATAGTTTTATTAATCTAAGTT
CAAGATCTGTATCTACATTTTAGCCAGTATAGAAAATGTTTTCTAATTTT
CAAACTTTCATTATATTTTCAATTTTTTTCAGGCTGATTCTTTGTGTACA
GCTTCATACAACTTTGGTTTGGAATGCTATCAGAAAGAACTCTATAATTA
TAGCAAAGAATGGCTAAAGTAAGATTTGTCCCTCATTCATCAAAATCTTC
TCTAAAATTTTCACCTAGCCTTGGGTCCACTTAAGGCTTGATAGACTGGA
TGGCGCGATCAAGTGGCCTGTAGTATGTGGACTGTGAAAACAGTCCGTCA
GATTTGAGTTGTTTTTAAAAGGTAAAAAAAGAATGAAGCAAGGTTTTCAT
TGAAATGTTATCTATCTCTTATTCCTTTTTTACACATCTTTGTCTACTTT
ATACGGACAAAAAAGCTTTTAAAATTATTGGCTGTGATGTGTTTAAATTA
TGTTATGTGGGGTTTTGTTCTAACACTTGAAGATAAGGTGTTTTAATCTT
TGACAGTATTGGTTACTTTAATCGTAGAAATCTTAGCGAAACTAATTTTA
GCGTAAATTAGCGAGTCAGGAAAATCTTGATTTTTTTGGGATTTATTTTA
GCGAATCACGATTTCAAAAAATTTCGCGTGGATAAATTTTAGCGAATATT
CGTATCAAATTATCGACTGAATTCGTTTACTTTCATTTCTTTGCACTGAA
ACCCTTCCTATTGATAAAAATGTATCAAGGCAATATAACCAGAAATTTCT
CGCTGATAAATTTTAGCGATCTGTCGATTCGGCGTGTTTGAGCGAGATTT
ATTTTAGCGAAAATAGGGAAAACTCGCTAAAACGCGCCGAATTAGTCTTG
CTAAAATTTCTACGATTAAAGTATTATTAATTGCAAAGGCACAGGTTTCT
TAAGGTTCTTTTTAGTTTATTAAGAGTGTAATTTTCATGTTTTTAACATT
TATAGACAGTCCATTGAAATTGGGAAAGAAACGCCAACTGTCAAAAGCGA
ACAACAGGTAAAGTCAAAAGTTAAAAAAGTATGATTACGATATTTGAGTA
ATATGTAACTAGGATTTAGATAATAATTCATTTTTGATTTGTTTCTAAGT
AAGAGTTTGTGACAGAATATAGGACAATCAGAACAAAAGGAGACTCCAAA
GAGGGTAGTCGAGCTAAAAACAACAACAACATTTTCGCCGTCTGAAAATA
TTGTTATCAAATTCTAGCCCTTCAGCCAGGGAGGCTTTGTCCCGGCTTTG
TCTAAAGATTTTTTTTGAGTGCCCCCCTCCCGTTTAACACGACAGGATCA
AAGTCCTACATTTACTAAAAAAAGACAAAAAGAAAGACTAATTTCGCCGT
CCACAACCCCGACCTGGTTAGTTTGTCCACCCCTACGAATTCACCATATT
TGTTTATCACGGGAATTATCTACATATGGTTTAAAGAACGACAAATAACG
CATGTGTGTTACACGAATGCAGGATTCTTTAGAGGAACAGACTGACTACA
CTCAACGGCTTGCAAGACCTGAGCAATAAGCAAAAAGGGATCGAGGGGTA
AAGAAATAGGATTTAATGATTGATATTTCACTGTTGATCTGACTGATTAT
CTACCAGATATCTTTATTTCATGTTAGGCTTCGTCACGTCAACTGCTTGC
TCTTGTGTATGTAGAACTGAAGGGTGATGATAATTATGCAAACGCTTTAA
ATGTCATTGG

Coding sequence (CDS) from alignment at sc0000461:232277..237836-

>TCONS_00023770 ID=TCONS_00023770|Name=TCONS_00023770|organism=Clytia hemisphaerica|type=CDS|length=8490bp|location=Sequence derived from alignment at sc0000461:232277..237836- (Clytia hemisphaerica)
GCTTCGTCACGTCAACTGCTTGCTCTTGTGTATGTAGAACTGAAGGGTGA
TGATAATTATGCAAACGCTTTAAATGTCATTACAGTCCATTGAAATTGGG
AAAGAAACGCCAACTGTCAAAAGCGAACAACAGGCTGATTCTTTGTGTAC
AGCTTCATACAACTTTGGTTTGGAATGCTATCAGAAAGAACTCTATAATT
ATAGCAAAGAATGGCTAAAGCTTTACGAAATAGTCAACATGCTACTGCAA
TGGACTTTGCAAACAAAGCCAAAGAACTTGTTTTCAAAGAACAGTTAAAG
TGCTACATCAAGCTAATGAAATTGTTGGAAAATGGCGAATCTGAAACACA
TTTGAGTATTACTGAAGAACAAATTAAACAATGTCATGCACAAATGATGC
AAGTCTTCTTGTTCAGGGCAGAGTTGAATGTGGCAATAGTTCTTATTCAG
AAGCTTGTTTTATCATCAGCACAGAAATGGCAATGAAAGTTGGAAAAGAT
TGGTTAGCTAGATATGTTGCACTTCAGTTGACGTACATGGTCGCCCTGGG
TGAACATTCAAAGACAACTTCCAGGAAACAACAAACAGTCAAGTATCAAG
TCTTGATGAGTGCAAAACCAAAGAAGATATTTCAAACCATTGTCAAAGTC
TAATGAAGTCTTTAGAAACAGTTCAAAATGTTATCAACACAAAGAATGAG
GGTCAACTACAAATTTTACATGAAACTGGATTAAAACTATGGAATTTAGT
GGTAGCAAAGAAACTAAATAAGCTAGTTGAGCGTGTTGCAATTGCTCAGG
ATGGCAGAAAATTCACTCAATAACATCAACATTATCAGACAAATTCAAGG
CTTCGTCACGTCAACTGCTTGCTCTTGTGTATGTAGAACTGAAGGGTGAT
GATAATTATGCAAACGCTTTAAATGTCATTACAGTCCATTGAAATTGGGA
AAGAAACGCCAACTGTCAAAAGCGAACAACAGGCTGATTCTTTGTGTACA
GCTTCATACAACTTTGGTTTGGAATGCTATCAGAAAGAACTCTATAATTA
TAGCAAAGAATGGCTAAAGCTTTACGAAATAGTCAACATGCTACTGCAAT
GGACTTTGCAAACAAAGCCAAAGAACTTGTTTTCAAAGAACAGTTAAAGT
GCTACATCAAGCTAATGAAATTGTTGGAAAATGGCGAATCTGAAACACAT
TTGAGTATTACTGAAGAACAAATTAAACAATGTCATGCACAAATGATGCA
AGTCTTCTTGTTCAGGGCAGAGTTGAATGTGGCAATAGTTCTTATTCAGA
AGCTTGTTTTATCATCAGCACAGAAATGGCAATGAAAGTTGGAAAAGATT
GGTTAGCTAGATATGTTGCACTTCAGTTGACGTACATGGTCGCCCTGGGT
GAACATTCAAAGACAACTTCCAGGAAACAACAAACAGTCAAGTATCAAGT
CTTGATGAGTGCAAAACCAAAGAAGATATTTCAAACCATTGTCAAAGTCT
AATGAAGTCTTTAGAAACAGTTCAAAATGTTATCAACACAAAGAATGAGG
GTCAACTACAAATTTTACATGAAACTGGATTAAAACTATGGAATTTAGTG
GTAGCAAAGAAACTAAATAAGCTAGTTGAGCGTGTTGCAATTGCTCAGGA
TGGCAGAAAATTCACTCAATAACATCAACATTATCAGACAAATTCAAGGC
TTCGTCACGTCAACTGCTTGCTCTTGTGTATGTAGAACTGAAGGGTGATG
ATAATTATGCAAACGCTTTAAATGTCATTACAGTCCATTGAAATTGGGAA
AGAAACGCCAACTGTCAAAAGCGAACAACAGGCTGATTCTTTGTGTACAG
CTTCATACAACTTTGGTTTGGAATGCTATCAGAAAGAACTCTATAATTAT
AGCAAAGAATGGCTAAAGCTTTACGAAATAGTCAACATGCTACTGCAATG
GACTTTGCAAACAAAGCCAAAGAACTTGTTTTCAAAGAACAGTTAAAGTG
CTACATCAAGCTAATGAAATTGTTGGAAAATGGCGAATCTGAAACACATT
TGAGTATTACTGAAGAACAAATTAAACAATGTCATGCACAAATGATGCAA
GTCTTCTTGTTCAGGGCAGAGTTGAATGTGGCAATAGTTCTTATTCAGAA
GCTTGTTTTATCATCAGCACAGAAATGGCAATGAAAGTTGGAAAAGATTG
GTTAGCTAGATATGTTGCACTTCAGTTGACGTACATGGTCGCCCTGGGTG
AACATTCAAAGACAACTTCCAGGAAACAACAAACAGTCAAGTATCAAGTC
TTGATGAGTGCAAAACCAAAGAAGATATTTCAAACCATTGTCAAAGTCTA
ATGAAGTCTTTAGAAACAGTTCAAAATGTTATCAACACAAAGAATGAGGG
TCAACTACAAATTTTACATGAAACTGGATTAAAACTATGGAATTTAGTGG
TAGCAAAGAAACTAAATAAGCTAGTTGAGCGTGTTGCAATTGCTCAGGAT
GGCAGAAAATTCACTCAATAACATCAACATTATCAGACAAATTCAAGGCT
TCGTCACGTCAACTGCTTGCTCTTGTGTATGTAGAACTGAAGGGTGATGA
TAATTATGCAAACGCTTTAAATGTCATTACAGTCCATTGAAATTGGGAAA
GAAACGCCAACTGTCAAAAGCGAACAACAGGCTGATTCTTTGTGTACAGC
TTCATACAACTTTGGTTTGGAATGCTATCAGAAAGAACTCTATAATTATA
GCAAAGAATGGCTAAAGCTTTACGAAATAGTCAACATGCTACTGCAATGG
ACTTTGCAAACAAAGCCAAAGAACTTGTTTTCAAAGAACAGTTAAAGTGC
TACATCAAGCTAATGAAATTGTTGGAAAATGGCGAATCTGAAACACATTT
GAGTATTACTGAAGAACAAATTAAACAATGTCATGCACAAATGATGCAAG
TCTTCTTGTTCAGGGCAGAGTTGAATGTGGCAATAGTTCTTATTCAGAAG
CTTGTTTTATCATCAGCACAGAAATGGCAATGAAAGTTGGAAAAGATTGG
TTAGCTAGATATGTTGCACTTCAGTTGACGTACATGGTCGCCCTGGGTGA
ACATTCAAAGACAACTTCCAGGAAACAACAAACAGTCAAGTATCAAGTCT
TGATGAGTGCAAAACCAAAGAAGATATTTCAAACCATTGTCAAAGTCTAA
TGAAGTCTTTAGAAACAGTTCAAAATGTTATCAACACAAAGAATGAGGGT
CAACTACAAATTTTACATGAAACTGGATTAAAACTATGGAATTTAGTGGT
AGCAAAGAAACTAAATAAGCTAGTTGAGCGTGTTGCAATTGCTCAGGATG
GCAGAAAATTCACTCAATAACATCAACATTATCAGACAAATTCAAGGCTT
CGTCACGTCAACTGCTTGCTCTTGTGTATGTAGAACTGAAGGGTGATGAT
AATTATGCAAACGCTTTAAATGTCATTACAGTCCATTGAAATTGGGAAAG
AAACGCCAACTGTCAAAAGCGAACAACAGGCTGATTCTTTGTGTACAGCT
TCATACAACTTTGGTTTGGAATGCTATCAGAAAGAACTCTATAATTATAG
CAAAGAATGGCTAAAGCTTTACGAAATAGTCAACATGCTACTGCAATGGA
CTTTGCAAACAAAGCCAAAGAACTTGTTTTCAAAGAACAGTTAAAGTGCT
ACATCAAGCTAATGAAATTGTTGGAAAATGGCGAATCTGAAACACATTTG
AGTATTACTGAAGAACAAATTAAACAATGTCATGCACAAATGATGCAAGT
CTTCTTGTTCAGGGCAGAGTTGAATGTGGCAATAGTTCTTATTCAGAAGC
TTGTTTTATCATCAGCACAGAAATGGCAATGAAAGTTGGAAAAGATTGGT
TAGCTAGATATGTTGCACTTCAGTTGACGTACATGGTCGCCCTGGGTGAA
CATTCAAAGACAACTTCCAGGAAACAACAAACAGTCAAGTATCAAGTCTT
GATGAGTGCAAAACCAAAGAAGATATTTCAAACCATTGTCAAAGTCTAAT
GAAGTCTTTAGAAACAGTTCAAAATGTTATCAACACAAAGAATGAGGGTC
AACTACAAATTTTACATGAAACTGGATTAAAACTATGGAATTTAGTGGTA
GCAAAGAAACTAAATAAGCTAGTTGAGCGTGTTGCAATTGCTCAGGATGG
CAGAAAATTCACTCAATAACATCAACATTATCAGACAAATTCAAGGCTTC
GTCACGTCAACTGCTTGCTCTTGTGTATGTAGAACTGAAGGGTGATGATA
ATTATGCAAACGCTTTAAATGTCATTACAGTCCATTGAAATTGGGAAAGA
AACGCCAACTGTCAAAAGCGAACAACAGGCTGATTCTTTGTGTACAGCTT
CATACAACTTTGGTTTGGAATGCTATCAGAAAGAACTCTATAATTATAGC
AAAGAATGGCTAAAGCTTTACGAAATAGTCAACATGCTACTGCAATGGAC
TTTGCAAACAAAGCCAAAGAACTTGTTTTCAAAGAACAGTTAAAGTGCTA
CATCAAGCTAATGAAATTGTTGGAAAATGGCGAATCTGAAACACATTTGA
GTATTACTGAAGAACAAATTAAACAATGTCATGCACAAATGATGCAAGTC
TTCTTGTTCAGGGCAGAGTTGAATGTGGCAATAGTTCTTATTCAGAAGCT
TGTTTTATCATCAGCACAGAAATGGCAATGAAAGTTGGAAAAGATTGGTT
AGCTAGATATGTTGCACTTCAGTTGACGTACATGGTCGCCCTGGGTGAAC
ATTCAAAGACAACTTCCAGGAAACAACAAACAGTCAAGTATCAAGTCTTG
ATGAGTGCAAAACCAAAGAAGATATTTCAAACCATTGTCAAAGTCTAATG
AAGTCTTTAGAAACAGTTCAAAATGTTATCAACACAAAGAATGAGGGTCA
ACTACAAATTTTACATGAAACTGGATTAAAACTATGGAATTTAGTGGTAG
CAAAGAAACTAAATAAGCTAGTTGAGCGTGTTGCAATTGCTCAGGATGGC
AGAAAATTCACTCAATAACATCAACATTATCAGACAAATTCAAGGCTTCG
TCACGTCAACTGCTTGCTCTTGTGTATGTAGAACTGAAGGGTGATGATAA
TTATGCAAACGCTTTAAATGTCATTACAGTCCATTGAAATTGGGAAAGAA
ACGCCAACTGTCAAAAGCGAACAACAGGCTGATTCTTTGTGTACAGCTTC
ATACAACTTTGGTTTGGAATGCTATCAGAAAGAACTCTATAATTATAGCA
AAGAATGGCTAAAGCTTTACGAAATAGTCAACATGCTACTGCAATGGACT
TTGCAAACAAAGCCAAAGAACTTGTTTTCAAAGAACAGTTAAAGTGCTAC
ATCAAGCTAATGAAATTGTTGGAAAATGGCGAATCTGAAACACATTTGAG
TATTACTGAAGAACAAATTAAACAATGTCATGCACAAATGATGCAAGTCT
TCTTGTTCAGGGCAGAGTTGAATGTGGCAATAGTTCTTATTCAGAAGCTT
GTTTTATCATCAGCACAGAAATGGCAATGAAAGTTGGAAAAGATTGGTTA
GCTAGATATGTTGCACTTCAGTTGACGTACATGGTCGCCCTGGGTGAACA
TTCAAAGACAACTTCCAGGAAACAACAAACAGTCAAGTATCAAGTCTTGA
TGAGTGCAAAACCAAAGAAGATATTTCAAACCATTGTCAAAGTCTAATGA
AGTCTTTAGAAACAGTTCAAAATGTTATCAACACAAAGAATGAGGGTCAA
CTACAAATTTTACATGAAACTGGATTAAAACTATGGAATTTAGTGGTAGC
AAAGAAACTAAATAAGCTAGTTGAGCGTGTTGCAATTGCTCAGGATGGCA
GAAAATTCACTCAATAACATCAACATTATCAGACAAATTCAAGGCTTCGT
CACGTCAACTGCTTGCTCTTGTGTATGTAGAACTGAAGGGTGATGATAAT
TATGCAAACGCTTTAAATGTCATTACAGTCCATTGAAATTGGGAAAGAAA
CGCCAACTGTCAAAAGCGAACAACAGGCTGATTCTTTGTGTACAGCTTCA
TACAACTTTGGTTTGGAATGCTATCAGAAAGAACTCTATAATTATAGCAA
AGAATGGCTAAAGCTTTACGAAATAGTCAACATGCTACTGCAATGGACTT
TGCAAACAAAGCCAAAGAACTTGTTTTCAAAGAACAGTTAAAGTGCTACA
TCAAGCTAATGAAATTGTTGGAAAATGGCGAATCTGAAACACATTTGAGT
ATTACTGAAGAACAAATTAAACAATGTCATGCACAAATGATGCAAGTCTT
CTTGTTCAGGGCAGAGTTGAATGTGGCAATAGTTCTTATTCAGAAGCTTG
TTTTATCATCAGCACAGAAATGGCAATGAAAGTTGGAAAAGATTGGTTAG
CTAGATATGTTGCACTTCAGTTGACGTACATGGTCGCCCTGGGTGAACAT
TCAAAGACAACTTCCAGGAAACAACAAACAGTCAAGTATCAAGTCTTGAT
GAGTGCAAAACCAAAGAAGATATTTCAAACCATTGTCAAAGTCTAATGAA
GTCTTTAGAAACAGTTCAAAATGTTATCAACACAAAGAATGAGGGTCAAC
TACAAATTTTACATGAAACTGGATTAAAACTATGGAATTTAGTGGTAGCA
AAGAAACTAAATAAGCTAGTTGAGCGTGTTGCAATTGCTCAGGATGGCAG
AAAATTCACTCAATAACATCAACATTATCAGACAAATTCAAGGCTTCGTC
ACGTCAACTGCTTGCTCTTGTGTATGTAGAACTGAAGGGTGATGATAATT
ATGCAAACGCTTTAAATGTCATTACAGTCCATTGAAATTGGGAAAGAAAC
GCCAACTGTCAAAAGCGAACAACAGGCTGATTCTTTGTGTACAGCTTCAT
ACAACTTTGGTTTGGAATGCTATCAGAAAGAACTCTATAATTATAGCAAA
GAATGGCTAAAGCTTTACGAAATAGTCAACATGCTACTGCAATGGACTTT
GCAAACAAAGCCAAAGAACTTGTTTTCAAAGAACAGTTAAAGTGCTACAT
CAAGCTAATGAAATTGTTGGAAAATGGCGAATCTGAAACACATTTGAGTA
TTACTGAAGAACAAATTAAACAATGTCATGCACAAATGATGCAAGTCTTC
TTGTTCAGGGCAGAGTTGAATGTGGCAATAGTTCTTATTCAGAAGCTTGT
TTTATCATCAGCACAGAAATGGCAATGAAAGTTGGAAAAGATTGGTTAGC
TAGATATGTTGCACTTCAGTTGACGTACATGGTCGCCCTGGGTGAACATT
CAAAGACAACTTCCAGGAAACAACAAACAGTCAAGTATCAAGTCTTGATG
AGTGCAAAACCAAAGAAGATATTTCAAACCATTGTCAAAGTCTAATGAAG
TCTTTAGAAACAGTTCAAAATGTTATCAACACAAAGAATGAGGGTCAACT
ACAAATTTTACATGAAACTGGATTAAAACTATGGAATTTAGTGGTAGCAA
AGAAACTAAATAAGCTAGTTGAGCGTGTTGCAATTGCTCAGGATGGCAGA
AAATTCACTCAATAACATCAACATTATCAGACAAATTCAAGGCTTCGTCA
CGTCAACTGCTTGCTCTTGTGTATGTAGAACTGAAGGGTGATGATAATTA
TGCAAACGCTTTAAATGTCATTACAGTCCATTGAAATTGGGAAAGAAACG
CCAACTGTCAAAAGCGAACAACAGGCTGATTCTTTGTGTACAGCTTCATA
CAACTTTGGTTTGGAATGCTATCAGAAAGAACTCTATAATTATAGCAAAG
AATGGCTAAAGCTTTACGAAATAGTCAACATGCTACTGCAATGGACTTTG
CAAACAAAGCCAAAGAACTTGTTTTCAAAGAACAGTTAAAGTGCTACATC
AAGCTAATGAAATTGTTGGAAAATGGCGAATCTGAAACACATTTGAGTAT
TACTGAAGAACAAATTAAACAATGTCATGCACAAATGATGCAAGTCTTCT
TGTTCAGGGCAGAGTTGAATGTGGCAATAGTTCTTATTCAGAAGCTTGTT
TTATCATCAGCACAGAAATGGCAATGAAAGTTGGAAAAGATTGGTTAGCT
AGATATGTTGCACTTCAGTTGACGTACATGGTCGCCCTGGGTGAACATTC
AAAGACAACTTCCAGGAAACAACAAACAGTCAAGTATCAAGTCTTGATGA
GTGCAAAACCAAAGAAGATATTTCAAACCATTGTCAAAGTCTAATGAAGT
CTTTAGAAACAGTTCAAAATGTTATCAACACAAAGAATGAGGGTCAACTA
CAAATTTTACATGAAACTGGATTAAAACTATGGAATTTAGTGGTAGCAAA
GAAACTAAATAAGCTAGTTGAGCGTGTTGCAATTGCTCAGGATGGCAGAA
AATTCACTCAATAACATCAACATTATCAGACAAATTCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013356XLOC_013356Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023770-proteinTCONS_00023770-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023770-exon-sc0000461-1575043694:237761..237836TCONS_00023770-exon-sc0000461-1575043694:237761..237836Clytia hemisphaericaexon
TCONS_00023770-exon-sc0000461-1575043694:237087..237299TCONS_00023770-exon-sc0000461-1575043694:237087..237299Clytia hemisphaericaexon
TCONS_00023770-exon-sc0000461-1575043694:236771..236850TCONS_00023770-exon-sc0000461-1575043694:236771..236850Clytia hemisphaericaexon
TCONS_00023770-exon-sc0000461-1575043694:236418..236448TCONS_00023770-exon-sc0000461-1575043694:236418..236448Clytia hemisphaericaexon
TCONS_00023770-exon-sc0000461-1575043694:235975..236024TCONS_00023770-exon-sc0000461-1575043694:235975..236024Clytia hemisphaericaexon
TCONS_00023770-exon-sc0000461-1575043694:235529..235654TCONS_00023770-exon-sc0000461-1575043694:235529..235654Clytia hemisphaericaexon
TCONS_00023770-exon-sc0000461-1575043694:234159..234239TCONS_00023770-exon-sc0000461-1575043694:234159..234239Clytia hemisphaericaexon
TCONS_00023770-exon-sc0000461-1575043694:233819..233904TCONS_00023770-exon-sc0000461-1575043694:233819..233904Clytia hemisphaericaexon
TCONS_00023770-exon-sc0000461-1575043694:232980..233031TCONS_00023770-exon-sc0000461-1575043694:232980..233031Clytia hemisphaericaexon
TCONS_00023770-exon-sc0000461-1575043694:232277..232359TCONS_00023770-exon-sc0000461-1575043694:232277..232359Clytia hemisphaericaexon
TCONS_00023770-exon-sc0000461-1510915933:237761..237836TCONS_00023770-exon-sc0000461-1510915933:237761..237836Clytia hemisphaericaexon
TCONS_00023770-exon-sc0000461-1510915933:237087..237299TCONS_00023770-exon-sc0000461-1510915933:237087..237299Clytia hemisphaericaexon
TCONS_00023770-exon-sc0000461-1510915933:236771..236850TCONS_00023770-exon-sc0000461-1510915933:236771..236850Clytia hemisphaericaexon
TCONS_00023770-exon-sc0000461-1510915933:236418..236448TCONS_00023770-exon-sc0000461-1510915933:236418..236448Clytia hemisphaericaexon
TCONS_00023770-exon-sc0000461-1510915933:235975..236024TCONS_00023770-exon-sc0000461-1510915933:235975..236024Clytia hemisphaericaexon
TCONS_00023770-exon-sc0000461-1510915933:235529..235654TCONS_00023770-exon-sc0000461-1510915933:235529..235654Clytia hemisphaericaexon
TCONS_00023770-exon-sc0000461-1510915933:234159..234239TCONS_00023770-exon-sc0000461-1510915933:234159..234239Clytia hemisphaericaexon
TCONS_00023770-exon-sc0000461-1510915933:233819..233904TCONS_00023770-exon-sc0000461-1510915933:233819..233904Clytia hemisphaericaexon
TCONS_00023770-exon-sc0000461-1510915933:232980..233031TCONS_00023770-exon-sc0000461-1510915933:232980..233031Clytia hemisphaericaexon
TCONS_00023770-exon-sc0000461-1510915933:232277..232359TCONS_00023770-exon-sc0000461-1510915933:232277..232359Clytia hemisphaericaexon
TCONS_00023770-exon-sc0000461-1491911889:237761..237836TCONS_00023770-exon-sc0000461-1491911889:237761..237836Clytia hemisphaericaexon
TCONS_00023770-exon-sc0000461-1491911889:237087..237299TCONS_00023770-exon-sc0000461-1491911889:237087..237299Clytia hemisphaericaexon
TCONS_00023770-exon-sc0000461-1491911889:236771..236850TCONS_00023770-exon-sc0000461-1491911889:236771..236850Clytia hemisphaericaexon
TCONS_00023770-exon-sc0000461-1491911889:236418..236448TCONS_00023770-exon-sc0000461-1491911889:236418..236448Clytia hemisphaericaexon
TCONS_00023770-exon-sc0000461-1491911889:235975..236024TCONS_00023770-exon-sc0000461-1491911889:235975..236024Clytia hemisphaericaexon
TCONS_00023770-exon-sc0000461-1491911889:235529..235654TCONS_00023770-exon-sc0000461-1491911889:235529..235654Clytia hemisphaericaexon
TCONS_00023770-exon-sc0000461-1491911889:234159..234239TCONS_00023770-exon-sc0000461-1491911889:234159..234239Clytia hemisphaericaexon
TCONS_00023770-exon-sc0000461-1491911889:233819..233904TCONS_00023770-exon-sc0000461-1491911889:233819..233904Clytia hemisphaericaexon
TCONS_00023770-exon-sc0000461-1491911889:232980..233031TCONS_00023770-exon-sc0000461-1491911889:232980..233031Clytia hemisphaericaexon
TCONS_00023770-exon-sc0000461-1491911889:232277..232359TCONS_00023770-exon-sc0000461-1491911889:232277..232359Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000461supercontigsc0000461:232277..237836 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.779719	0.469953	0.58678	0.634296	0	0.638908	0	0.277057	0	0	0	0	0	0	0	0.221425	0	0	0.753914	1.66856	0	0	25.9641	27.4862	0	0	0	0.778147
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
IPR013940Spo22/ZIP4/TEX11
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0051321meiotic cell cycle
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051321 meiotic cell cycle
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00023770 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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