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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00023862 ID=TCONS_00023862|Name=TCONS_00023862|organism=Clytia hemisphaerica|type=transcript|length=1342bp
ttatatgaattcgcgaaagttttatctgtgaaatttcggctaaaaccata
attcgcgaaacttaaattcgctaaatttcACGACTTTTAACTTCGTGAAA
CTTTCTtcccgcgaaactttctgcccttaaagtagtaTAAGATTCACATA
TCGTTAGTAAATTTGTGCTAAAAAGTCTGCGCCTTAAACATTTGTCTCAC
TTCTCCATAACCTTGTGTTAATGTGCATCTAGTTTCGATAAGAAAAATAA
CCATCATTAAGGTACAAATAACGTGAATGATATGTGGCTCACTTTTCATG
ATGCTAGTTTCAAGTAAGATCTTTATTCTACGCTCTtccatttttgtgaa
aaatttggcGTTGTTGTGCTACCTTGTTTTTCGGATTACGCTTTCGGATT
ATGTCACGAATCACACACGTTAAAATGAATTTACCGAGTCAAATGATATA
TATTCTATTGACTGATGTCGTTGAAATTGATGCGGTCGATTTTTCAATTC
AGTCAAGTTTTTATATTTGTTGGCCTTTCTCTAAGCTTTTCCGAATGAGA
GGTTATAATGTAAACACAGAAGTTTTTGCAAAGAGGAGTGATGTATGAGA
GACGATGTTCTAGTCAGAAACACGCTCCGAATAGACTTATCTAATTCATA
ACTTTGAAGGTTTTAAGTTTCGTTCCTTTATCTGCCACCTGTTCGGAAAG
GGTTAGACCTGTTTTTCAGTTAGGTACATGCAGTTTTTATTCTTATTAGT
TTTATTTAGATTGTCACTGAGTGTCTCTCAAATATTTCGACATTAAAAGG
AAATTTTCTAATGTTGGGCCTGCACATGGAAGCAAAATACAGTTGGCGGT
TTTACATCGAATATGGGAACGTCTCGAACAATGGAGCTACGAAATAGAGA
GTCTTCGCGCTtatcaaaaacatgaaattctcctatttgatttggttggt
catgcacaatttttttcgaatcgcaaattttatcaattttcaatatGTCC
CATTTATTTTTTAAGACACATGTGTGACAAATACGAGATATTCCCAAATT
TATaggtttatttttttgattttaatctcaaaaaattgtttcaaataGTT
GAATTGTACAGTTATTATATTTGTTATAAAATTCCATATTTATTTTACAT
TATTATACACAATCCATGATAATAATTACTAAAATTTCTATCATTAAGAA
TTTAGAATTTTATTAtgataagaaaaaaatctcTAGTTTTTAGTCTCTAT
TTTTTTGGGTGAATTATTTGAAAGTATATTTTGTAATTTATCATCATTTT
AATAGAATTTAGAAGAaggagaaaaaataattttagtcggtg Run BLAST on NCBI transcript from alignment at sc0000463:121085..122426 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00023862 ID=TCONS_00023862|Name=TCONS_00023862|organism=Clytia hemisphaerica|type=transcript|length=1342bp|location=Sequence derived from alignment at sc0000463:121085..122426 (Clytia hemisphaerica)
caccgactaaaattattttttctcctTCTTCTAAATTCTATTAAAATGAT
GATAAATTACAAAATATACTTTCAAATAATTCACCCAAAAAAATAGAGAC
TAAAAACTAgagatttttttcttatcaTAATAAAATTCTAAATTCTTAAT
GATAGAAATTTTAGTAATTATTATCATGGATTGTGTATAATAATGTAAAA
TAAATATGGAATTTTATAACAAATATAATAACTGTACAATTCAACtattt
gaaacaattttttgagattaaaatcaaaaaaataaacctATAAATTTGGG
AATATCTCGTATTTGTCACACATGTGTCTTAAAAAATAAATGGGACatat
tgaaaattgataaaatttgcgattcgaaaaaaattgtgcatgaccaacca
aatcaaataggagaatttcatgtttttgataAGCGCGAAGACTCTCTATT
TCGTAGCTCCATTGTTCGAGACGTTCCCATATTCGATGTAAAACCGCCAA
CTGTATTTTGCTTCCATGTGCAGGCCCAACATTAGAAAATTTCCTTTTAA
TGTCGAAATATTTGAGAGACACTCAGTGACAATCTAAATAAAACTAATAA
GAATAAAAACTGCATGTACCTAACTGAAAAACAGGTCTAACCCTTTCCGA
ACAGGTGGCAGATAAAGGAACGAAACTTAAAACCTTCAAAGTTATGAATT
AGATAAGTCTATTCGGAGCGTGTTTCTGACTAGAACATCGTCTCTCATAC
ATCACTCCTCTTTGCAAAAACTTCTGTGTTTACATTATAACCTCTCATTC
GGAAAAGCTTAGAGAAAGGCCAACAAATATAAAAACTTGACTGAATTGAA
AAATCGACCGCATCAATTTCAACGACATCAGTCAATAGAATATATATCAT
TTGACTCGGTAAATTCATTTTAACGTGTGTGATTCGTGACATAATCCGAA
AGCGTAATCCGAAAAACAAGGTAGCACAACAACgccaaatttttcacaaa
aatggaAGAGCGTAGAATAAAGATCTTACTTGAAACTAGCATCATGAAAA
GTGAGCCACATATCATTCACGTTATTTGTACCTTAATGATGGTTATTTTT
CTTATCGAAACTAGATGCACATTAACACAAGGTTATGGAGAAGTGAGACA
AATGTTTAAGGCGCAGACTTTTTAGCACAAATTTACTAACGATATGTGAA
TCTTAtactactttaagggcagaaagtttcgcgggaAGAAAGTTTCACGA
AGTTAAAAGTCGTgaaatttagcgaatttaagtttcgcgaattatggttt
tagccgaaatttcacagataaaactttcgcgaattcatataa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00023862-exon-sc0000463-1491911889:121085..122426 | TCONS_00023862-exon-sc0000463-1491911889:121085..122426 | Clytia hemisphaerica | exon |
| TCONS_00023862-exon-sc0000463-1510915933:121085..122426 | TCONS_00023862-exon-sc0000463-1510915933:121085..122426 | Clytia hemisphaerica | exon |
| TCONS_00023862-exon-sc0000463-1575043694:121085..122426 | TCONS_00023862-exon-sc0000463-1575043694:121085..122426 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000463 | supercontig | sc0000463:121085..122426 . |
Blast
The following BLAST results are available for this feature:
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