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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00023869 ID=TCONS_00023869|Name=TCONS_00023869|organism=Clytia hemisphaerica|type=transcript|length=2282bp
AGTCTGCAAATTGAACAAAGGAGGAGTTATGGAACGATCTCCTTGCCTTG
CGCAACACTCCTCTTACTGTCTTAACAACATTACAAGTGATTTGCCTTTG
CAGGGTGCAGGTTACAAAAACGGTTGGCAGAAGATTTCGTGACTGGGCCA
CTAAAATCAGGCAATATGGTGTTTGAGGGGCTTGTTGGTTATTATGATTA
CATCTTGCAAACAGGCGATGTGCGAACAGCAACAATGCCATTTATCCAAT
CACCAAAATATGTTGTCTGTGCTGTCATTCTGTATTTGCTGATGGTTATT
TTTGGTCCCAGAATCATGGAAAAACGCCAACCGTTTCAACTACGCAATGT
ACTCATTGGATACAACTGTTTCTCTGTTGTATTCTCAGTTTGGATGATGT
GGGAGttttttgcTTGCTCCGTGCTAAATCCAAATTTCAATCTGTTATGT
CAAGATGTTATCCAGGCTGATACTTCTCCAATGACCATGAGGCTTGTCAA
TGTGCATTGGTGGTATTTCTTCTCTAAAGTCATTGAATTTTTGGATACgt
tatTCTTTGTCCTTCGCAAAAAGAACAAGCAAATTAGTTTCTTACATGTT
TATCACCATGGGTCTATGTTAATATTACAATGGAGTCTTGTAAAATATGT
TCCAGGAGGAGTTTCTTACTTTGGTCCCATGTTGAACTGCTTCATCCATA
CTTTAATGTACGCTTATTACATGTTATCTGCATTCGGCCCTCACATGCAA
AAATATTTGTGGTGGAAGAAATACCTAACCAGAATGCAAATGTACCAATT
CGTTCTGATTTTTTTACACGTGTCAAACGCCATGACGCACAAGTATTCAC
CCAACGCAATCcctgttaatgttttcttttggCTCCATTGGTTCTACATG
ATTTCACTTTTCTGGCTTTTCCAACATTTTTACCAAAATGCCTACCGTGC
AAAGAAATTAGAAgaatcttcaaaatcaaaagccGAATAGATAACACTGT
CTGGTCTGTAAAAAGTCTCAGCTGTAATGCACTTTCCTCAACAAAGATTC
AGGGAATTACAAAAGATTTTTGTCTCAGAAAAAGATGCAGTTCGTGATGA
TTTTTGCATACGTTTGTGGCGCCCTCCACATCGATTGCAGTTACTGGCGC
TACTTTTTGGTTTTTAATGGAACATACCTCATCTCTCTACTGTTTCTATT
CGGTCAATTCTACATCTCTTCTTACCTTGAACGGAAAGAGAAGAGTAAAA
CTTCCTAGCTATTTATTACACAATTTTATATAGCTTTTCTTATATCGTTT
TGTTCCGTTCTTTGATTTTTATATACGAAAAATATCGGCATTTTGTCTGT
CAttaattaaaacaatttttagtgCCCCCTACACTTGATCgttaaaatat
ttaattttactttGATAAACTTCGTAAGTTGTCTGGCTGCAAGGAATTCC
ctatttgatttatatttcattGAAAACTAATCTTTCCAACTTAGAGGTTT
GTGGTCAAGCATATCTACCACCAGTTTAGTATTACAATAACTTTTTAGCA
AGTTTTTCTGCTAATCTATTACAATCAAAGGCATTAACTTTATTACAAGG
AAATATTATATAGATAGATAGGgttgatataaaaaataaatctttatCTT
GgccataaatatttttttctcgatttgtTATCTGATTCCTTCTGCGGGTA
TTTTAACTCAACGTGTGTGGTACACGcttgctttttataagaatcttgtt
tttttcaattcatcatggatattcttaactttttgaggaaaattgtcctg
aaatattcttaggTCTGGATCTAATCCCAGCAAAACTTTGGCATTTTTGT
TGAATCTTTTAGCATTGCTGTGTAATAAAAGGCAATTCAACGGTAAAATG
CTCTAAAGATGGGctttaggttcagttgccatATTCAATGATGGTtgtat
tcttaccatattcttaatcttttggccaatttcatcatagatattcttat
aaagtatattcttattgaaaaaaagcgtgtatgatgTTTCGTAAACTCAA
TTTGAATTGCAAATGATTTGACTTTGACCGATGAAATGAATCAGGGTTTC
ACAGTTTTCCCGAATTGACAAGCTTGTGTATTTtattgatgtaaaaatac
tgATATGAATACAGTAAACTCCTTCTAGCCTTTTCGTAATCCCAGCACAC
GCTCAGGTGGCTAATAAACGGGGGCGaggtcggaaaaattttcaaatttt
aataagtGGGGAACCCGATTGCCGGGTCTGGG Run BLAST on NCBI protein sequence of TCONS_00023869-protein >TCONS_00023869-protein ID=TCONS_00023869-protein|Name=TCONS_00023869-protein|organism=Clytia hemisphaerica|type=polypeptide|length=274bp
MVFEGLVGYYDYILQTGDVRTATMPFIQSPKYVVCAVILYLLMVIFGPRI
MEKRQPFQLRNVLIGYNCFSVVFSVWMMWEFFACSVLNPNFNLLCQDVIQ
ADTSPMTMRLVNVHWWYFFSKVIEFLDTLFFVLRKKNKQISFLHVYHHGS
MLILQWSLVKYVPGGVSYFGPMLNCFIHTLMYAYYMLSAFGPHMQKYLWW
KKYLTRMQMYQFVLIFLHVSNAMTHKYSPNAIPVNVFFWLHWFYMISLFW
LFQHFYQNAYRAKKLEESSKSKAE Run BLAST on NCBI transcript from alignment at sc0000464:933..7476+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00023869 ID=TCONS_00023869|Name=TCONS_00023869|organism=Clytia hemisphaerica|type=transcript|length=6544bp|location=Sequence derived from alignment at sc0000464:933..7476+ (Clytia hemisphaerica)
AGTCTGCAAATTGAACAAAGGAGGAGTTATGGAACGATCTCCTTGCCTTG
CGCAACACTCCTCTTACTGTCTTAACAACATTACAAGTGATTTGCCTTTG
CAGGGTGCAGGTTACAAAAACGGTTGGCAGAAGATTTCGTGACTGGGCCA
CTGtaagttatttttatttaaacttGCAATTTTCACGTGCAGTTGACAGt
gtgtttgtttgcttttattgtttaaaatagATCCGCTCTATTCAAAGTTT
TAGAAGGACTTCCTGGGACCTAGCTAGTCTTTCCCTTAGCATTCTTTGGT
AAACAACTCGAGCTACTTTACAGAGTGTTTTTGATTTCATTGCCTAAGTT
AGAGGCTTCAAAATAGGTCAAGGATCTTTGAATATTCAGGCTTTTTGGTC
TGAAATTGGGTGAAAAGTTCTGTATTATATGCTGgctgaaaagtttgatt
tcccAACTTGCAGCTCTACCCATATCTCAGCACTCAAAAAGACCAGTTTG
GCAGCTACATGGTTTCTCATGGTTTATCGGGAAACCTGGATTTAACATAT
TTTGTCTTCtttaaagtcagaaaaacttggaaaacataAGCTCCAATTCC
ATTTAAATCTGAAAAAGGAAATCTGAAATCTTAGCCCCATATTACTGGGG
GAATTTTTTCCAAAGGACTGGAAAACAGAGGATGAAACCTTTTcttgaaa
ctgaaaaattggggaaactttttttaataattgaaaatgtgtgagacata
tttgtttgaaaattgtgtGGTACTGTAGTGACTGTATGAAACTCATgctg
agagttggcacctctgcTTTATCACAAATTTATGAATTACATATATGTAT
ATTGGAGGCTCCCTCAGCGTTAACTCTGAGCACAATATCACACGATATTT
GGTcttcaaaaacagaaaaaaacttaGATAATGACGCAATCCATTGAAAA
AGTCCGAATTAGGCATCGcagctcaaaaatctttcaaatacgATCAtgtt
ttgacctctgatcaagcaatcacaaagaaaaaatttcctaaTTACGTAAT
CCAGAAAACCACTTAGGGGAGCCTCATATCTGCTCATATTGGGACCTTGA
ACACAACActcatcagaaaaatttaaaactgcTTTGTCAGATTGAGAGGC
CTGTCTGCTTTGTAAAACAGCAAAAACAACACTTTTAAGatttaattttt
tactttttattatttAACCTATTTTGGTCCTATCATTTGGCCAAAAAAAG
TCCTACTCTAATACACAGTTTACACAAAATTGACCAAGAGCCTTGCTCTA
GTCAAcgaaatttttccatttttttttctttcttttttttatcattttct
gatATAAATTTTTTCCTTAGATTTTAACTCTTTGTTAACATTTACTGTTc
catattttgtattttcattTTCTTGGAACCAATATTTTGATCTTTAATCA
TATTTTTTTCTTGCAAAGTGTACATAGCACGAGAGCCACCAATGGTTAAA
AACTTATGTACATAGTTTCTTTCTTTATGttattcaatttgaaataaacc
taacctaacctaacctaacctaatgaacaaatcaacaaaaattgaGGTTA
ATCTTGTGTGGAAAAAAATCGTTCCATACAATGTAACCTGATCCCTTTCA
GTAGGATTATACTACAACAAAATGTATTATTGACAGATTTGTGGTTTCCT
TCAGTTTGTAAAAGCAAAGACAAATAAAACAAGATTTTAACAACCACAAG
AGCTGTCAGAAGGGCTGAAGTACTGTTAAAGCATTTTATTAAAAACTAAA
CTGCCTTGCTTAAGGATAGAGAACTTTCAGTTTGTATATAGTTTTGTCAA
CCAAAGCTGTTGAGAAATTCCACTTGATTCTGATACtgtaatgaaaatta
tttttcttatctcTAGAAAATCAGGCAATATGGTGTTTGAGGGGCTTGTT
GGTTATTATGATTACATCTTGCAAACAGGCGATGTGCGAACAGCAACAAT
GCCATTTATCCAATCACCAAAATATGTTGTCTGTGCTGTCATTCTGTATT
TGCTGATGGTTATTTTTGGTCCCAGAATCATGGAAAAACGCCAACCGTTT
CAACTACGCAATGTACTCATTGGATACAACTGTTTCTCTGTTGTATTCTC
AGTTTGGATGATGTGGGAGGtaataatattttctttatggatcatatttt
tctgaaaaatgagagcaccaatttcaatttctaatCTCCAAAATATCAAT
ctgtttttatttcagttttttgcTTGCTCCGTGCTAAATCCAAATTTCAA
TCTGTTATGTCAAGATGTTATCCAGGCTGATACTTCTCCAATGACCATGA
GGGTAACTAGATTTAATTTCTATTAATTTAagaatttattaatttttaag
accTTTTTTGAATTGGTTATCAAGGTTGTCTTTATTAATTTCACAACCTA
TGCTATATATTTTGTTCCTATTTTGCAAATTCCACATATATATGAGGCTt
tacaaataatttttaatttacattcatcTGAAAAAGCTTTGAAATTGCTT
CAGTGGCTCTTTGTAGGAGAATTTGTAAAGACTTCGAAGCACTGCCATTT
ACCTTTCATTCAGTATTTTGCTATATAAATTGAAACACGCTTTCTTATAT
CAGCTTGTCAATGTGCATTGGTGGTATTTCTTCTCTAAAGTCATTGAATT
TTTGGATACggtaagttttttttacttgctattaaaatttcaacctaCGG
AAGGTTTACATTTCGCAATGCTGAAACATTTTGATTGTGCTAGAAACGCA
TATGGTTTACTGATAGACTCTTTTTAGTTTATTTGATGGAGTAGGTTACT
ATATGAAAGAAATGCTCTAatacttttgttttatttttttagttatTCTT
TGTCCTTCGCAAAAAGAACAAGCAAATTAGTTTCTTACATGTTTATCACC
ATGGGTCTATGTTAATATTACAATGGAGTCTTGTAAAATATGTTCCAGGA
GGAGTTTGTAAGTACACCATCCTATTATTTTCTTCCTATTATATCTCCAG
agatatttttgaatttgataacTGATTAAAGAGTAGTTCTATTTTTATAA
CCTCCACGTTAATTAGTTTGCCAAGGCAACAGATAACTGCAACTAACATT
GTAATTATCATCAATTTAGTCTTAAATAGGAACTTTTTTCTGAGCTGCAG
TAATCTGCTTTTGAATGATTTTATCCATGTCTAATTGATGTTCAACTTGA
AATTTCGGTTTATCTTGTTATTTCCTTCTTCTAGCTTACTTTGGTCCCAT
GTTGAACTGCTTCATCCATACTTTAATGTACGCTTATTACATGTTATCTG
CATTCGGCCCTCACATGCAAAAATATTTGTGGTGGAAGAAATACCTAACC
AGAATGCAAATGGTAAGATTGTTTTCCTTTTGCATGAAATTTATACTAAA
ACTGAAAAGGGTAAAAAGTTGTGCTGTCGCACTGAGCATAAGTATGTAAT
AGCTGGTTTGTTAACCAGGTAAACTATCTATTATTAGCAATCCACATTCA
TGAATCACTTAAGTTATATATCTTATCTGGGTTTGTAACAATGAAAAATG
CACGCGTCTCACATACAAACACACTTTTTCATCACAATATCATCATTGCA
CACACCCGTTCTTCACCAAAGATTTGCTTTTCAGCTGAAATAAAATTTGC
GCGAAAATCTGGGCGAAacattttttggtcaattttttcaaatgaagAAG
GGATGTGCAATGATATTGGAAAGTCCCAGCCGAAAAGAAGGAAAGCAGCA
AGACATCAAGGAAATTTTAGTCAGGTGCGTATTCTTTTTAAGCTGGGACT
TTCCATTTTTTCTCTTACACTTGATGTGTATTTTCTCAATGTCTTAGAAC
TgcttctctttttctttctaGTACCAATTCGTTCTGATTTTTTTACACGT
GTCAAACGCCATGACGCACAAGTATTCACCCAACGCAATCcctgttaatg
ttttcttttggCTCCATTGGTTCTACATGATTTCACTTTTCTGGCTTTTC
CAACATTTTTACCAAAATGCCTACCGTGCAAAGAAATTAGAAgaatcttc
aaaatcaaaagccGAATAGATAACACTGTCTGGTCTGTAAAAAGTCTCAG
CTGTAATGCACTTTCCTCAACAAAGATTCAGGGAATTACAAAAGATTTTT
GTCTCAGAAAAAGGTGAATGGATTTTCACTTCCATggactgaaaaattga
aagtttattATGCAAAAAGCAAGCAAACGCTAAGAGTTAGTTTTTACATA
TTTACGCAACAACgaaacaacaaaaaactttgAGAGATGTAGATATTTGA
ATTCgtagaagaaatttttttttTCATAAGTTCCTATGACCCGTTTTTAT
ACCATGCAATTATTTTTTATTTTGGATTTTTTTTCGTTTTTTAAACCTCC
TCTATCAAATGTCATCACTAGCCGGGTCAAGGGGTTTCCTTTGGGACCAC
GTCATCACATTTTTATCTCATTCCCTTTCAACCAATACTTTTGGTGACTT
GTATTGGTATTATGATGTCTGTATTTTAGGGGAGGTATAAGTAATTCTTG
ATAATAATAAATATTTTAAAGGTTTTGTTTTTAAATACGAGTGATATTGT
TTGCTTACTCATCATTTTTGATTTAAAAGCTTTTTCACGTTGAATTGACA
TGGATGTGGAGCAAGACTTGTCAGAAAGAGGGGCAGAAAAACATTTTTTA
CTTAAATCAGCATAACATAACAATAGGGAGACACCGTCCTGATACGAAGT
ATGCgtctgatatgaaacgggaacactcatgtaaaaacaaaacctttaat
gatGATTTTTAcattacgttttttgattatttAGATGTTTGCTTAAATTG
TAGCTGTAATTATTTCAATATCGTGTAGATAGAATGAAAATTAGCAATTA
TATCACAGAAAGAAAGATTGCATTACATTTTATCATTGTGGAATATCAAT
GTTGTTATTCTTCTctgatttcaaaatgtttcgtaAAAAACTGATACATA
CAAGCACTCAACTTTTGACCTTCGATAGaaagaaattgcaaaatctCAAT
GCAATTGATATCCAAAGATATGAAGGATTGAAAAATATAGTCAGATATCT
TCGTAATCTATCAATCATCTTACACTGCTCTATCTATTCTGTTATAAAGG
GCAATCGAAAGTGAAAACTTgcgaacaaaaaaatcacatttgcATGCATA
AATCACAACAACTAGTAACAAACACACATCACGCACAAAAAGCATTCACC
ACGAAACACTAATCTGACTCTAATTTTTGACCTTTCATACCTTTAGATGC
AGTTCGTGATGATTTTTGCATACGTTTGTGGCGCCCTCCACATCGATTGC
AGTTACTGGCGCTACTTTTTGGTTTTTAATGGAACATACCTCATCTCTCT
ACTGTTTCTATTCGGTCAATTCTACATCTCTTCTTACCTTGAACGGAAAG
AGAAGAGTAAAACTTCCTAGCTATTTATTACACAATTTTATATAGCTTTT
CTTATATCGTTTTGTTCCGTTCTTTGATTTTTATATACGAAAAATATCGG
CATTTTGTCTGTCAttaattaaaacaatttttagtgCCCCCTACACTTGA
TCgttaaaatatttaattttactttGATAAACTTCGTAAGTTGTCTGGCT
GCAAGGAATTCCctatttgatttatatttcattGAAAACTAATCTTTCCA
ACTTAGAGGTTTGTGGTCAAGCATATCTACCACCAGTTTAGTATTACAAT
AACTTTTTAGCAAGTTTTTCTGCTAATCTATTACAATCAAAGGCATTAAC
TTTATTACAAGGAAATATTATATAGATAGATAGGgttgatataaaaaata
aatctttatCTTGgccataaatatttttttctcgatttgtTATCTGATTC
CTTCTGCGGGTATTTTAACTCAACGTGTGTGGTACACGcttgctttttat
aagaatcttgtttttttcaattcatcatggatattcttaactttttgagg
aaaattgtcctgaaatattcttaggTCTGGATCTAATCCCAGCAAAACTT
TGGCATTTTTGTTGAATCTTTTAGCATTGCTGTGTAATAAAAGGCAATTC
AACGGTAAAATGCTCTAAAGATGGGctttaggttcagttgccatATTCAA
TGATGGTtgtattcttaccatattcttaatcttttggccaatttcatcat
agatattcttataaagtatattcttattgaaaaaaagcgtgtatgatgTT
TCGTAAACTCAATTTGAATTGCAAATGATTTGACTTTGACCGATGAAATG
AATCAGGGTTTCACAGTTTTCCCGAATTGACAAGCTTGTGTATTTtattg
atgtaaaaatactgATATGAATACAGTAAACTCCTTCTAGCCTTTTCGTA
ATCCCAGCACACGCTCAGGTGGCTAATAAACGGGGGCGaggtcggaaaaa
ttttcaaattttaataagtGGGGAACCCGATTGCCGGGTCTGGG Coding sequence (CDS) from alignment at sc0000464:933..7476+ >TCONS_00023869 ID=TCONS_00023869|Name=TCONS_00023869|organism=Clytia hemisphaerica|type=CDS|length=4950bp|location=Sequence derived from alignment at sc0000464:933..7476+ (Clytia hemisphaerica)
ATGGTGTTTGAGGGGCTTGTTGGTTATTATGATTACATCTTGCAAACAGG
CGATGTGCGAACAGCAACAATGCCATTTATCCAATCACCAAAATATGTTG
TCTGTGCTGTCATTCTGTATTTGCTGATGGTTATTTTTGGTCCCAGAATC
ATGGAAAAACGCCAACCGTTTCAACTACGCAATGTACTCATTGGATACAA
CTGTTTCTCTGTTGTATTCTCAGTTTGGATGATGTGGGAGttttttgcTT
GCTCCGTGCTAAATCCAAATTTCAATCTGTTATGTCAAGATGTTATCCAG
GCTGATACTTCTCCAATGACCATGAGGCTTGTCAATGTGCATTGGTGGTA
TTTCTTCTCTAAAGTCATTGAATTTTTGGATACgttatTCTTTGTCCTTC
GCAAAAAGAACAAGCAAATTAGTTTCTTACATGTTTATCACCATGGGTCT
ATGTTAATATTACAATGGAGTCTTGTAAAATATGTTCCAGGAGGAGTTTC
TTACTTTGGTCCCATGTTGAACTGCTTCATCCATACTTTAATGTACGCTT
ATTACATGTTATCTGCATTCGGCCCTCACATGCAAAAATATTTGTGGTGG
AAGAAATACCTAACCAGAATGCAAATGTACCAATTCGTTCTGATTTTTTT
ACACGTGTCAAACGCCATGACGCACAAGTATTCACCCAACGCAATCcctg
ttaatgttttcttttggCTCCATTGGTTCTACATGATTTCACTTTTCTGG
CTTTTCCAACATTTTTACCAAAATGCCTACCGTGCAAAGAAATTAGAAga
atcttcaaaatcaaaagccGAATAGATGGTGTTTGAGGGGCTTGTTGGTT
ATTATGATTACATCTTGCAAACAGGCGATGTGCGAACAGCAACAATGCCA
TTTATCCAATCACCAAAATATGTTGTCTGTGCTGTCATTCTGTATTTGCT
GATGGTTATTTTTGGTCCCAGAATCATGGAAAAACGCCAACCGTTTCAAC
TACGCAATGTACTCATTGGATACAACTGTTTCTCTGTTGTATTCTCAGTT
TGGATGATGTGGGAGttttttgcTTGCTCCGTGCTAAATCCAAATTTCAA
TCTGTTATGTCAAGATGTTATCCAGGCTGATACTTCTCCAATGACCATGA
GGCTTGTCAATGTGCATTGGTGGTATTTCTTCTCTAAAGTCATTGAATTT
TTGGATACgttatTCTTTGTCCTTCGCAAAAAGAACAAGCAAATTAGTTT
CTTACATGTTTATCACCATGGGTCTATGTTAATATTACAATGGAGTCTTG
TAAAATATGTTCCAGGAGGAGTTTCTTACTTTGGTCCCATGTTGAACTGC
TTCATCCATACTTTAATGTACGCTTATTACATGTTATCTGCATTCGGCCC
TCACATGCAAAAATATTTGTGGTGGAAGAAATACCTAACCAGAATGCAAA
TGTACCAATTCGTTCTGATTTTTTTACACGTGTCAAACGCCATGACGCAC
AAGTATTCACCCAACGCAATCcctgttaatgttttcttttggCTCCATTG
GTTCTACATGATTTCACTTTTCTGGCTTTTCCAACATTTTTACCAAAATG
CCTACCGTGCAAAGAAATTAGAAgaatcttcaaaatcaaaagccGAATAG
ATGGTGTTTGAGGGGCTTGTTGGTTATTATGATTACATCTTGCAAACAGG
CGATGTGCGAACAGCAACAATGCCATTTATCCAATCACCAAAATATGTTG
TCTGTGCTGTCATTCTGTATTTGCTGATGGTTATTTTTGGTCCCAGAATC
ATGGAAAAACGCCAACCGTTTCAACTACGCAATGTACTCATTGGATACAA
CTGTTTCTCTGTTGTATTCTCAGTTTGGATGATGTGGGAGttttttgcTT
GCTCCGTGCTAAATCCAAATTTCAATCTGTTATGTCAAGATGTTATCCAG
GCTGATACTTCTCCAATGACCATGAGGCTTGTCAATGTGCATTGGTGGTA
TTTCTTCTCTAAAGTCATTGAATTTTTGGATACgttatTCTTTGTCCTTC
GCAAAAAGAACAAGCAAATTAGTTTCTTACATGTTTATCACCATGGGTCT
ATGTTAATATTACAATGGAGTCTTGTAAAATATGTTCCAGGAGGAGTTTC
TTACTTTGGTCCCATGTTGAACTGCTTCATCCATACTTTAATGTACGCTT
ATTACATGTTATCTGCATTCGGCCCTCACATGCAAAAATATTTGTGGTGG
AAGAAATACCTAACCAGAATGCAAATGTACCAATTCGTTCTGATTTTTTT
ACACGTGTCAAACGCCATGACGCACAAGTATTCACCCAACGCAATCcctg
ttaatgttttcttttggCTCCATTGGTTCTACATGATTTCACTTTTCTGG
CTTTTCCAACATTTTTACCAAAATGCCTACCGTGCAAAGAAATTAGAAga
atcttcaaaatcaaaagccGAATAGATGGTGTTTGAGGGGCTTGTTGGTT
ATTATGATTACATCTTGCAAACAGGCGATGTGCGAACAGCAACAATGCCA
TTTATCCAATCACCAAAATATGTTGTCTGTGCTGTCATTCTGTATTTGCT
GATGGTTATTTTTGGTCCCAGAATCATGGAAAAACGCCAACCGTTTCAAC
TACGCAATGTACTCATTGGATACAACTGTTTCTCTGTTGTATTCTCAGTT
TGGATGATGTGGGAGttttttgcTTGCTCCGTGCTAAATCCAAATTTCAA
TCTGTTATGTCAAGATGTTATCCAGGCTGATACTTCTCCAATGACCATGA
GGCTTGTCAATGTGCATTGGTGGTATTTCTTCTCTAAAGTCATTGAATTT
TTGGATACgttatTCTTTGTCCTTCGCAAAAAGAACAAGCAAATTAGTTT
CTTACATGTTTATCACCATGGGTCTATGTTAATATTACAATGGAGTCTTG
TAAAATATGTTCCAGGAGGAGTTTCTTACTTTGGTCCCATGTTGAACTGC
TTCATCCATACTTTAATGTACGCTTATTACATGTTATCTGCATTCGGCCC
TCACATGCAAAAATATTTGTGGTGGAAGAAATACCTAACCAGAATGCAAA
TGTACCAATTCGTTCTGATTTTTTTACACGTGTCAAACGCCATGACGCAC
AAGTATTCACCCAACGCAATCcctgttaatgttttcttttggCTCCATTG
GTTCTACATGATTTCACTTTTCTGGCTTTTCCAACATTTTTACCAAAATG
CCTACCGTGCAAAGAAATTAGAAgaatcttcaaaatcaaaagccGAATAG
ATGGTGTTTGAGGGGCTTGTTGGTTATTATGATTACATCTTGCAAACAGG
CGATGTGCGAACAGCAACAATGCCATTTATCCAATCACCAAAATATGTTG
TCTGTGCTGTCATTCTGTATTTGCTGATGGTTATTTTTGGTCCCAGAATC
ATGGAAAAACGCCAACCGTTTCAACTACGCAATGTACTCATTGGATACAA
CTGTTTCTCTGTTGTATTCTCAGTTTGGATGATGTGGGAGttttttgcTT
GCTCCGTGCTAAATCCAAATTTCAATCTGTTATGTCAAGATGTTATCCAG
GCTGATACTTCTCCAATGACCATGAGGCTTGTCAATGTGCATTGGTGGTA
TTTCTTCTCTAAAGTCATTGAATTTTTGGATACgttatTCTTTGTCCTTC
GCAAAAAGAACAAGCAAATTAGTTTCTTACATGTTTATCACCATGGGTCT
ATGTTAATATTACAATGGAGTCTTGTAAAATATGTTCCAGGAGGAGTTTC
TTACTTTGGTCCCATGTTGAACTGCTTCATCCATACTTTAATGTACGCTT
ATTACATGTTATCTGCATTCGGCCCTCACATGCAAAAATATTTGTGGTGG
AAGAAATACCTAACCAGAATGCAAATGTACCAATTCGTTCTGATTTTTTT
ACACGTGTCAAACGCCATGACGCACAAGTATTCACCCAACGCAATCcctg
ttaatgttttcttttggCTCCATTGGTTCTACATGATTTCACTTTTCTGG
CTTTTCCAACATTTTTACCAAAATGCCTACCGTGCAAAGAAATTAGAAga
atcttcaaaatcaaaagccGAATAGATGGTGTTTGAGGGGCTTGTTGGTT
ATTATGATTACATCTTGCAAACAGGCGATGTGCGAACAGCAACAATGCCA
TTTATCCAATCACCAAAATATGTTGTCTGTGCTGTCATTCTGTATTTGCT
GATGGTTATTTTTGGTCCCAGAATCATGGAAAAACGCCAACCGTTTCAAC
TACGCAATGTACTCATTGGATACAACTGTTTCTCTGTTGTATTCTCAGTT
TGGATGATGTGGGAGttttttgcTTGCTCCGTGCTAAATCCAAATTTCAA
TCTGTTATGTCAAGATGTTATCCAGGCTGATACTTCTCCAATGACCATGA
GGCTTGTCAATGTGCATTGGTGGTATTTCTTCTCTAAAGTCATTGAATTT
TTGGATACgttatTCTTTGTCCTTCGCAAAAAGAACAAGCAAATTAGTTT
CTTACATGTTTATCACCATGGGTCTATGTTAATATTACAATGGAGTCTTG
TAAAATATGTTCCAGGAGGAGTTTCTTACTTTGGTCCCATGTTGAACTGC
TTCATCCATACTTTAATGTACGCTTATTACATGTTATCTGCATTCGGCCC
TCACATGCAAAAATATTTGTGGTGGAAGAAATACCTAACCAGAATGCAAA
TGTACCAATTCGTTCTGATTTTTTTACACGTGTCAAACGCCATGACGCAC
AAGTATTCACCCAACGCAATCcctgttaatgttttcttttggCTCCATTG
GTTCTACATGATTTCACTTTTCTGGCTTTTCCAACATTTTTACCAAAATG
CCTACCGTGCAAAGAAATTAGAAgaatcttcaaaatcaaaagccGAATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00023869-exon-sc0000464-1491911889:933..1084 | TCONS_00023869-exon-sc0000464-1491911889:933..1084 | Clytia hemisphaerica | exon |
| TCONS_00023869-exon-sc0000464-1510915933:933..1084 | TCONS_00023869-exon-sc0000464-1510915933:933..1084 | Clytia hemisphaerica | exon |
| TCONS_00023869-exon-sc0000464-1575043694:933..1084 | TCONS_00023869-exon-sc0000464-1575043694:933..1084 | Clytia hemisphaerica | exon |
| TCONS_00023869-exon-sc0000464-1491911889:2849..3101 | TCONS_00023869-exon-sc0000464-1491911889:2849..3101 | Clytia hemisphaerica | exon |
| TCONS_00023869-exon-sc0000464-1510915933:2849..3101 | TCONS_00023869-exon-sc0000464-1510915933:2849..3101 | Clytia hemisphaerica | exon |
| TCONS_00023869-exon-sc0000464-1575043694:2849..3101 | TCONS_00023869-exon-sc0000464-1575043694:2849..3101 | Clytia hemisphaerica | exon |
| TCONS_00023869-exon-sc0000464-1491911889:3198..3284 | TCONS_00023869-exon-sc0000464-1491911889:3198..3284 | Clytia hemisphaerica | exon |
| TCONS_00023869-exon-sc0000464-1510915933:3198..3284 | TCONS_00023869-exon-sc0000464-1510915933:3198..3284 | Clytia hemisphaerica | exon |
| TCONS_00023869-exon-sc0000464-1575043694:3198..3284 | TCONS_00023869-exon-sc0000464-1575043694:3198..3284 | Clytia hemisphaerica | exon |
| TCONS_00023869-exon-sc0000464-1491911889:3586..3642 | TCONS_00023869-exon-sc0000464-1491911889:3586..3642 | Clytia hemisphaerica | exon |
| TCONS_00023869-exon-sc0000464-1510915933:3586..3642 | TCONS_00023869-exon-sc0000464-1510915933:3586..3642 | Clytia hemisphaerica | exon |
| TCONS_00023869-exon-sc0000464-1575043694:3586..3642 | TCONS_00023869-exon-sc0000464-1575043694:3586..3642 | Clytia hemisphaerica | exon |
| TCONS_00023869-exon-sc0000464-1491911889:3825..3939 | TCONS_00023869-exon-sc0000464-1491911889:3825..3939 | Clytia hemisphaerica | exon |
| TCONS_00023869-exon-sc0000464-1510915933:3825..3939 | TCONS_00023869-exon-sc0000464-1510915933:3825..3939 | Clytia hemisphaerica | exon |
| TCONS_00023869-exon-sc0000464-1575043694:3825..3939 | TCONS_00023869-exon-sc0000464-1575043694:3825..3939 | Clytia hemisphaerica | exon |
| TCONS_00023869-exon-sc0000464-1491911889:4217..4344 | TCONS_00023869-exon-sc0000464-1491911889:4217..4344 | Clytia hemisphaerica | exon |
| TCONS_00023869-exon-sc0000464-1510915933:4217..4344 | TCONS_00023869-exon-sc0000464-1510915933:4217..4344 | Clytia hemisphaerica | exon |
| TCONS_00023869-exon-sc0000464-1575043694:4217..4344 | TCONS_00023869-exon-sc0000464-1575043694:4217..4344 | Clytia hemisphaerica | exon |
| TCONS_00023869-exon-sc0000464-1491911889:4854..5145 | TCONS_00023869-exon-sc0000464-1491911889:4854..5145 | Clytia hemisphaerica | exon |
| TCONS_00023869-exon-sc0000464-1510915933:4854..5145 | TCONS_00023869-exon-sc0000464-1510915933:4854..5145 | Clytia hemisphaerica | exon |
| TCONS_00023869-exon-sc0000464-1575043694:4854..5145 | TCONS_00023869-exon-sc0000464-1575043694:4854..5145 | Clytia hemisphaerica | exon |
| TCONS_00023869-exon-sc0000464-1491911889:6279..7476 | TCONS_00023869-exon-sc0000464-1491911889:6279..7476 | Clytia hemisphaerica | exon |
| TCONS_00023869-exon-sc0000464-1510915933:6279..7476 | TCONS_00023869-exon-sc0000464-1510915933:6279..7476 | Clytia hemisphaerica | exon |
| TCONS_00023869-exon-sc0000464-1575043694:6279..7476 | TCONS_00023869-exon-sc0000464-1575043694:6279..7476 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000464 | supercontig | sc0000464:933..7476 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0016021 |
integral component of membrane |
Blast
BLAST of TCONS_00023869 vs. Swiss-Prot (Human)
Match: ELOV4 (Elongation of very long chain fatty acids protein 4 OS=Homo sapiens GN=ELOVL4 PE=1 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 3.136e-57 Identity = 116/280 (41.43%), Postives = 169/280 (60.36%), Query Frame = 1
Query: 184 VGYYDYILQTGDVRTATMPFIQSPKYVVCAVILYLLMVIFGPRIMEKRQPFQLRNVLIGYNCFSVVFSVWMMWEFFACSVLNPNFNLLCQDVIQADTSPMTMRLVNVHWWYFFSKVIEFLDTLFFVLRKKNKQISFLHVYHHGSMLILQWSLVKYVPGGVSYFGPMLNCFIHTLMYAYYMLSAFGPHMQKYLWWKKYLTRMQMYQFVLIFLHVSNAMTHKYSPNAIPVNVFFWLHW---FYMISLFWLFQHFYQNAYRXXXXXXXXXXXXXXITLSGL*K 1014
V +Y + D R P +QSP + LYLL V GP+ M+ R+PFQ+R VLI YN V+ ++++ E F S N ++ +CQ V ++ + +R+ WWYF SK +E+LDT+FF+LRKKN Q+SFLHVYHH +M L W +K+V GG ++FG LN FIH +MY+YY L+AFGP +QKYLWWK+YLT +Q+ QF + H + ++ Y+ P W+HW Y IS +LF +FY Y+ K ++ K+ I+ +G+ K
Sbjct: 23 VEFYRWTWSIADKRVENWPLMQSPWPTLSISTLYLLFVWLGPKWMKDREPFQMRLVLIIYNFGMVLLNLFIFRELFMGS-YNAGYSYICQSVDYSN-NVHEVRIAAALWWYFVSKGVEYLDTVFFILRKKNNQVSFLHVYHHCTMFTLWWIGIKWVAGGQAFFGAQLNSFIHVIMYSYYGLTAFGPWIQKYLWWKRYLTMLQLIQFHVTIGHTALSL---YTDCPFPK----WMHWALIAYAISFIFLFLNFYIRTYKEPKKPKAGKTAMNGISANGVSK 293
The following BLAST results are available for this feature:
|
