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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00023900 ID=TCONS_00023900|Name=TCONS_00023900|organism=Clytia hemisphaerica|type=transcript|length=1004bp
CAAAAGTTAAATAGATATCGTAGAAGAAGCACAATACAGATTGTTTTACA
ATAAACAGTTCAACCAAACAACATTTTTATACAATGTCCTTCTATTTTTG
AAGATGCGTTTTATATCTCTTGGCATTTACTTTAACATTATTGTTCGTaa
caaaaaaaggttttgtggCATCGTGCCACGTGACACAGGCAGACACCATC
ACTTTTTTTGACTGTCGGTTTTTTTCATGATACAAACGTTTATCAGGGAC
ATCAGCCTTTTTTCCTTGGCTATATACTATATACTATATATGCTATTTTG
TGAATTAATGGGTACATCAAGAGTCTTTCTCGTCTTGGAACACACACTTC
TCTACGCTTCTTTTGTGGGAAAACCGTTCAGCCAAAGCACCAGATCTTTC
CGTACGTCGTTTCTTTGTTCCTTCAGTAACTCGGGGTCTTGATTCTTTTA
TACTGCTTCCATCCATTTCGTTTCACCATTCTTCGCACTGACGATCACTT
TATTCCCGTTATCTTTTCAATCTCTCGCGGTGATTTGTGTGTTCCAGGTG
ATTCTTCCTGCAAACAAATCAGTTGCTCAACAATTTCTTCGTTTTCTGCA
GTTGTTACAGTTATTGGACGGCCGGAGCCGGGTTTTCTGTCCATGGTCCC
GCTTTTTTTGAATCGATTAATGAGATTTTGCACAGAACTTTTATACCACT
TCTTCATGGGATGCTCTTTACAAATCCTGTACGCTGACCAGCCTTTTTCG
ATATAATCATTCTTTATGACAGCTTTATCTTCATGGGAAAAACCATCTTT
ACGCAAGTAAAACTGCTTTTGAGTGAAGGTCAAAGTTTCAGAAAGAAAAA
CGCCGGtttatttttttcgagcgcAATGGAACGACatctattgaaaagaa
gtaattGGCACTCTCTCCCCATGCGTCCGTTTGTTGAAAACATCAGTTGG
GTAAAGGTACCATTTTCAACATTGTTGACTCTCTCGTTGTAGTGTCTCTC
TTTT Run BLAST on NCBI transcript from alignment at sc0000464:220782..221785 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00023900 ID=TCONS_00023900|Name=TCONS_00023900|organism=Clytia hemisphaerica|type=transcript|length=1004bp|location=Sequence derived from alignment at sc0000464:220782..221785 (Clytia hemisphaerica)
AAAAGAGAGACACTACAACGAGAGAGTCAACAATGTTGAAAATGGTACCT
TTACCCAACTGATGTTTTCAACAAACGGACGCATGGGGAGAGAGTGCCaa
ttacttcttttcaatagatGTCGTTCCATTgcgctcgaaaaaaataaaCC
GGCGTTTTTCTTTCTGAAACTTTGACCTTCACTCAAAAGCAGTTTTACTT
GCGTAAAGATGGTTTTTCCCATGAAGATAAAGCTGTCATAAAGAATGATT
ATATCGAAAAAGGCTGGTCAGCGTACAGGATTTGTAAAGAGCATCCCATG
AAGAAGTGGTATAAAAGTTCTGTGCAAAATCTCATTAATCGATTCAAAAA
AAGCGGGACCATGGACAGAAAACCCGGCTCCGGCCGTCCAATAACTGTAA
CAACTGCAGAAAACGAAGAAATTGTTGAGCAACTGATTTGTTTGCAGGAA
GAATCACCTGGAACACACAAATCACCGCGAGAGATTGAAAAGATAACGGG
AATAAAGTGATCGTCAGTGCGAAGAATGGTGAAACGAAATGGATGGAAGC
AGTATAAAAGAATCAAGACCCCGAGTTACTGAAGGAACAAAGAAACGACG
TACGGAAAGATCTGGTGCTTTGGCTGAACGGTTTTCCCACAAAAGAAGCG
TAGAGAAGTGTGTGTTCCAAGACGAGAAAGACTCTTGATGTACCCATTAA
TTCACAAAATAGCATATATAGTATATAGTATATAGCCAAGGAAAAAAGGC
TGATGTCCCTGATAAACGTTTGTATCATGAAAAAAACCGACAGTCAAAAA
AAGTGATGGTGTCTGCCTGTGTCACGTGGCACGATGccacaaaacctttt
tttgttACGAACAATAATGTTAAAGTAAATGCCAAGAGATATAAAACGCA
TCTTCAAAAATAGAAGGACATTGTATAAAAATGTTGTTTGGTTGAACTGT
TTATTGTAAAACAATCTGTATTGTGCTTCTTCTACGATATCTATTTAACT
TTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00023900-exon-sc0000464-1491911889:220782..221785 | TCONS_00023900-exon-sc0000464-1491911889:220782..221785 | Clytia hemisphaerica | exon |
| TCONS_00023900-exon-sc0000464-1510915933:220782..221785 | TCONS_00023900-exon-sc0000464-1510915933:220782..221785 | Clytia hemisphaerica | exon |
| TCONS_00023900-exon-sc0000464-1575043694:220782..221785 | TCONS_00023900-exon-sc0000464-1575043694:220782..221785 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000464 | supercontig | sc0000464:220782..221785 . |
Blast
The following BLAST results are available for this feature:
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