TCONS_00023919 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023919
Unique NameTCONS_00023919
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2776

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023919 ID=TCONS_00023919|Name=TCONS_00023919|organism=Clytia hemisphaerica|type=transcript|length=2776bp
GTTCTTGACCGCCGAAGAAAGTCGAGTCAAACTTCCACCATTTCTTCaCG
TAGTGAAGAAGAAGACACAATGGTAGCACCATATGGACGTCAAGTGGACG
TCTCAAAGCTCACAGATGAAGAATGTAGCCAAATACTTAACGTTATCAGT
AAAGACATCTTACTACGGAAATCTGAAAAAGAACGAATAACGTATGTCAA
CAAGAAGTTTGAAGATTTTCGGCGTTCAATACGACTCGCAAATCAAGCGC
AAAAGAAGCGTATTCCTTTCGACGATTATTGTTTAATATGTGGAAAACAT
CTATTCACCTTCATCTGTCTTCTCAATCTGGGTGAAGAATGTATATCATG
TGAACACCAGTGTTGTAGCACGTGTCGAAAAGTGTTGATCTTAGAAGGTG
ATAATTGGGCTGATAGATGTTATATTTGTAAATTATGTTTGGAAAAAAGG
AAATGCAAACGTAAAACGTTCGAATGGTTTCACGAATTGGTGGATAAACG
ATTCAAACGGTTTGGAAGTGCAAAGATATTACGCGCTGTTTATAAACAAA
GGACGACCATCGAACCACGGGTAATTACGTTACTTGCTCATTGCCGTGAA
CTGCAACCGACACGTCGTATGTCCTTGACTTCCATGCAGAAACGGTACTC
AATCAGTTATTCAAAAGACGACGAAAAAGTTACATACACGGACACTTATg
aaaataaaactgaaaatgctGATAGTGGCACTGAACTACGATCCTATCCG
CCGATTCGGCGCCAAAAATATCATTCTGAATCTGAACTTACTGAAATGTT
ATCTATGACACAGAAACCAAAATCTGAGAGTGTAGGTCATAGACGAAAGT
CTTCTCTTAACGAAGACGATTTTATTCGTCGTACGTCTATACTTGACGAA
GATGCTAGGCTAGATAGTGGTTACAATGATTCTGAGAAACAAGCTCTGTT
GGCACAACCTCAAAAATCTGTTCCGAAAAGAAAGCTGAGTGCGCACGTGC
AACCGGAATCAGTTAAACCAATTATTATGGAGGATAAAGAACAAGAGGAT
CTTGATATTGTGGAGAATAAAGAATTTAGTAAAGTGACTCTGTGAAAGAT
GAGGAGGTGGAATAATTCAAAGACCAGAATGGACAACGCGTGACAATAAG
AAAACTTCCCAAAAGTCAACACAGAAGAAATTGTGATTCACTAAGAAATG
GTCGTCAATTTATCACAATGAAATCGGCTATCACATCCTCGACACTTGTA
TTTGAATGCATCAGCAAGGTTTTACGAATCGAAAAACATGAACCATTTCT
CAACACCTTCAAGTGATGGAAAATTCACAATAAACTGTATTGCATACGTT
GAATTTTAAACTATAGTCTGGCTCAAAAAGAATCTGCAGCAGAAACACAA
CAGGCTATAACCTTTGATAGAATTAGAACTATAGGGTGGATTTGtacttt
tggaaaatatttccaTGGTTGGAATATGATCCAAAAGAAGGTATTAGCta
agaaatttggaaaatgaagatgaaaataaatttcttaatgACTTTGAAAT
CGTCAATAAACAACAAAAGAACATTCAACACGAACTAGATTTccttcttc
ttcactttttcatctaaattttctttttcattataTTCAACTGCTGATTA
TCGTTTCAACGAGTGCCAAACCGCTATatatagaagttcgaattctatca
aaagttatagcattTTTTGTCACTATTACAGAATAATTAGTGACAGACTT
TAGTAATATGTTGAAAGCTCTCTCATATAATTACGAAGCTTTTAACTTTC
CAATTTTAAACTTgaatttgaaacttttaaaatatacaTCATTTTATCAT
TTAGTTTGTCCTTTTATTATTAGGATTATGACCTAATAGTTATGGGCTAA
TCATTTGCTACCCTTTGTCCTGAGTCCatagagccttaaaatgttctcat
taTTTTGgctatcaaagccttatgtttttatatagtttgttctcgtTAAA
AAGACATTTACTTTAAGGTTCCGAGTAAACGTCTCCACTTGCTtatcaat
tttcgaaaatctttcaGACCCCTGCGTTCTTATTAGGAGCCCCCCGCCCT
CgtctatttatttttgaaaatattttcaactatCACAAGCTtaattgctc
taaatagcctggtttTAGTTTATATTTGCCTtatttaagggggggggggt
ttaagaGGTACAATTTCGGACCATCCTTTATTTGGAcccctcccccgttt
attagatcttgaaaaaaatttgaacccTCCCTTTTATTCGACCCCACCCC
TACTGTTTGGAACCTGAGTGTTTATTAGCTTTTCACTCTACTGAGTACTG
ATGGTGTGTAATATTTTCTCTTGCGTCCATTGTTAACAAAAATTTAGTAT
GATGGACGATATTCATTAAAGTTTcagactttttaatttttattacgtCG
AGTTAAGCTTTTATGTGTTGTGtatattttagtttttacatttggttttt
taaagaaatttttggttttgccatttttttgtAGAGGATTGTTGAAAGTC
CCATTATTTCTACGACATTATAAAACATatcattttcaagaaattctaaa
tttaacatttttttcgcTTCGCTTCGCTTCGCTTGCTTGGTCTGAGATTT
TAAAATTCACCaactttttatacttttttgacATTGTTCAACTATTActt
accgggtgacccacgaaaaagttcagacgtttctcgacgtcttgaggccg
aacaaatgtcccaaagtgcttggagt
Run BLAST on NCBI

transcript from alignment at sc0000465:52797..71546+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023919 ID=TCONS_00023919|Name=TCONS_00023919|organism=Clytia hemisphaerica|type=transcript|length=18750bp|location=Sequence derived from alignment at sc0000465:52797..71546+ (Clytia hemisphaerica)
GTTCTTGACCGCCGAAGAAAGTCGAGTCAAACTTCCACCATTTCTTCGTA AGTCTCCCTATTTTTCACTATTTCTTATTTCGCTTCATTTACGAAGGTCa gtgacaaaaaataagaaccacTTAAGAACACTAAAGAATAAACTCTAAAG CAAACTGAGAGAATGAATAATATTTTAGCAGGGTCCGGCGAAGTCTCTTC AGGCAATGGCGTTTAGGTAAGGCTGGCTTGCTTAAATTCAAGGCCATTAC GTTCATTGTTGAGAAGAGGTGTTATTTCTATATCTCATTTCTCTATACTT TGTATGCTGTCTTCACAGTTCCATTTCGGCAAAAGGCCTTCCACAGTTCC GCGCCACTTAGAATGTTGACAAATTTTACAGTTTGCATTTCCTATTAGTA ATATTGACTTTTTACAACTtcgatggtgacgtcatgaAAATCTAAACTCT CACTTACTCAAAAAACACCCGGTTAAACATTGAacgaaatgaagaaaaat ttgtcTAAGTGTAATCCCAGCTTTGAATGTTTAGCTCTCATAAACGAAGT GTATAATCAGTTTTAATCGCTTTAACGGATTTCAATGATCCATAGATTTA TGACAGTTTGTGTGGCAAATATATACGAAGCACCTTGGATTGTACAtgca atttttataagaacaaactatataggaacataaggctttgatggccaaaa tattaaaagtaagttaagaacattttaagactttacggattctaaaacac ccgattttgtAGAAAAATGGGCGAAAAATACCAatgaaatggtgaaatta agaacatttctaggcttaaaGTTCAAACGTCCATAATATTCGAATCCTTC AGatgttctttactttttgagtttcaagccctaaaaaactttaaagtttC ATCAGAATCTAAAATAACagtgtttaaaaaaaacattttaaggacGAGCG CAATCTAGGTGGGACCACGATCTTCATTTGCAATAATTTCATATACACTC GACCTATGTCAGCGTAATCCaatgtcattttgtttttgtcacGCAAATTT GAACCTTATCGGGGCGGTCCTTCTTTAAGTGCTTTGAACCAGTAATATCC TAGGTCGTTAAGAGGTCGTGAAATAAGGTAACAAACCTAACACGCAATGA ACTTTGGTCTTTTTACATTTCGGCAAACTAATCAAATACACATAATTACT GTACTGGTCGTTTCGTTGTTTCCTTAATTGCTGTCAAATTAATTACGTTC ATCAGCGTTTTTAAGAAAGACAGCTGtcatacaacgttgtttcaacgttt atttaacgttcacagcgtccatataacgttagatgaacgttgaaacaacg ttgtgtgccagctgggaagacAGTTTTATATAACCAAGTTAGTGAAGACT TGCATCCACATTTTCTTTCGTAGAATATATTGTTGAATGGAGCTTGATAT CTCTACTGTCTGAGCATCGATGTAGAGTCTGAAGGCTAGATCAGCAGTAA AAGAAAGTCAAGCTTTGtagtcttttctgatttttgtaccAAAATTATTT TCTCCGTAAGCTGGATTGAAACGTGATTTGATCTTCGAGAAAGGATGACA AGAGCTAATGTATATTGTTTTGGTGTGTTTAGAGAGGTTCCTTGATACAG GCTTTTTATAAGATCAAACCATATACccgggggcggggggggggggatat ggttacttaggtaaaaattggtgctgggtatgtgcggacggtaagagTCG TTTTTTCAcccttcaaagtctctctaaggaagggtcagaaaaatcagaaa gctttaaattagtctctctaagcgttgattttcggaggtcccgtccgcac atacccctcatccgccaaccctagaATATAAGAAtgtaaggcttcgatgg tcaaactaccaagaacaagttaagaacatttaaaggatTTGCGTACTCTA AAAAACCCGGTTTTtcaggaaaatgggcaaaaatactcacaaaactGGCG AAAGaaagaacatgataagaacatttttaggcttgaaactaaaaaaatta agaacatccgaaggcttcaaaaatgtttgatgttcttataaaaaaacgtg tattattaTTACATTTACTGTATTATTCTTAGAAAACTTGTTTctataaa aatgaattttatgaatttttataaatttaattttttatgaatataaaaaa tttaattttacacTTAACATCATTAAATTCCAATTACATTCTCTTAtgta ttaaattattttaatagtCAAGTCGTTCACATTTTTTATGACATGTTTTT GTTATCATAGTAGGGCTGTTTACTATCTATTGTCTGTTAACGAGTTGTAC TTAATACCGCCGAGCGTCTTTTTTCTTTATGTCATTGAAAAAATGTCTTA TAACGTTTATTAGCTAATTATAGAAAATAGACCGGAATTTTCTTATATCA TGACAAAAAAGACATCTTGACTTAACTGTAAAACGCttaactgatttttt tttcaaatcatttaGTTTTTTATCTCTTGAGCGATAAGATCAGACCAACA ACTTGATTTATATTAAATCATTTGAAGTAAGGTTATCTTTTTTGCTTTTG GAATTTCAGCTTGTTATGTTTGTATGAGTTTATGTTTTTGGTGAGAAATC TGAACAAAGTTTGACAAGAATTTGTTTATTACATTCAGGGCAGGGACCCA Catataccgtaacttggtctaatatcgacatccctcgtctaattccgaca cccttctttagaggcaggaataatatgaaagtttgaatcactgattgaaa aaggatatTTCCTccctgaccactaagcaaagaaaatagctttgaccttt ctatcaatttcagctgatgaaaagggtgtcggaattagaggagggatgtc gacattagaccaagttacggtagttGTCAGTTCGTTANtcggaattagag gaggaatgtcgacattagaccaagttacggtagttGTCAGTTCGTTATGT TTTGTCTGGGGGAGAGGTGCACTTAGGCAAAGTCGGTAGTGGGTagcctg agatcagattgtgatcgTTTTCTGCCCACCATACCCACCGCCATATCAGG AAAActtagtttttgactttccggcgcacaacaagattcttgttgtagaa ttttccgcgggaggactattttcctcagatggttaatttatattcaagtg ccttcagagctGTTCAGAGGTCTACCGTACGCGTAAGAAAATTCACTCCC TAAAAgcgacaaaataaattttaaaatttgatcatTTTAGCTTTAGCTGA AACTTTGGAAACTTAGTATTCCCCTATTTAATTTTGTACTGCAGGGCACC GACTGCAAATCTTTTGAAAACGTAAGATAATAGTGTAGAAATCTTCTTGT CGATACAATTAAGTTACTGCCGTTTTCTTTGTTTGCTCATCATCtaacga aaaagtttcttatgaaATGTCTACTTTTACTTTCGATTTTTATTCACCTT TTTTGAATCGCCTGACACTAATATTTCAATTGAGACTTATGTGATTTCAG TTTAATTTTTATATGTACACgttattatttataagaacatccaaaatctt cgcatattcttaaccttttgagttttaagcctagaaatgttcttcttttc accattttgtgagtatttctgtccgttttcctaagaaatcgggtgtttca gAGACAATATGTGGGTATGGGATGTGTCATTTGCCATGTTCAGTGTAGAG AGATCAGATTTCAGTGTATTTTTTCGATGGGTTGAATTTTAGGGTATTTA CATCATTGGCGATGGTTTCTTCGCTGATTTTTAACACATCGAGTGAAACC GGTATCTCTGGTGGCAGTAGATTTTAGTTCTTGCAGTGCGCTCAGAGCTT TTCTCCCTGAGCGACGCGTTGAGAATCACAGTGTGTATAATTTGTTCATA ACTCTACCCCGAAAATTCCAGttttttcttcgtcattttTTTAATCACAT CAGCGAGACCTAGATAAACATTGGCAGAAAATCCAAGAAAATATGAAGCC AAAAAACATAGTTTGAATTAGAATGACGTCATAAGTAGTTTTCCTTAAGT TTGTCGGTGGCTTTTAAAAGCCGGCAAATCTGTCGTAGTTTGCGGTTAAA ACGCTTGTTTTCAATGGTAAAGTTATTTCATGGTTTTCTTATTGCTCTCG TTGATAATTGGTTTTCGTTTGTTCAAGTTTGCTGTGTTATACTGTAGTAA ATTCTCGTTCTTAAAGAAAtgtatctttaaaattttcgatGACTTTTAAG TTTCTTTACTGTATCCTAGGAGTAAAAGTCCCGTCCGGTCAGTGATACGG AGATGTTGCCTTAGTGTCTGGTATACTGCTAACCCCATTTCAGATCAACC ATTCTGAGCATACCACGTTCTGCTTTAAAGGGCTTTGGCGAATATGATAA ATGGCTCTCTTATGGAGCCGTGACCTTTAGAGAGAGTGAATACGTGCCAT GTGcggagtatcagaatctgctcggagattagTATTTTGCTAAACAAGCT TTTTGGTGACAAGCTGGTGTGTTCTGATATGGATCTTTTCAGCGATAAGG ATGGATACTGACTCAAACCCAGTCTTTTTAAATTGGCTTTCAACATTGGT TGTTCTGAGAATTATTACTTATGCATACTTGAAAAAGTTCTGTGTTTATA TGTTGCTTaagttttgtataagaacactTCATAGTTGACTAAAGTCggtt taaagttttgaaatttataattGTGAATCAAGAatttgttctttaaaaat ttagacTTCTTTGGATTCTAGATTACATAGTACTAACAGTTAGGTTATGC CTGCTAATGAGTATCAGTAACTTAAAAGAATGAAACGATATAGCCCCCTT TACATAGATATTGTTCTTATGAATAATGGTCATACGACTCCATATCATGG ATTTGAAATAGAAGAAGACGACGAAAAATTCTTCTTGATGAAAATAGTAa atataaagttttaaaaaaggaAATAGAAAGAAGTAGGAAAACAAAGGGAT AAGAAATGAACACAAAAAGCTAGGTTGGCttcatcaaaaatttatattcg cTTTATATATATTTcgtccaactttttttttctatctctTCTTCACCAAG TTTAGTGTCACGTAGGGGTACTTCATGAAATTCTTAACCTCAATAAGAAT ATATTGTAAGGGTGAGAAGGGGAAtacaaaaaagggaaaaaaagttttat tataGATCTAATGGGATCGCTCTTTGtgtgtgtgttttttgttttggaat TGATGAAAGCATGGTCTCCTTGGCTAGACTCATTAGAACCCAATATTGTT ATATTGCAGAATACAGTTCAAAAGATAATTGCATAATGTTCATGCATTTC TTCTATCATCAAATATACAGTTCCAACGTGCGATTCAACTTTTTATTCGA TGGAGAGTTTAGATACTACAATCTAATCTAGGGAATTGAGTAAATTATCA GTAGCCTGGAGTGCAACTGGGTTGTCTAGGGGTTATACTTTCTGTCTGCA GATTTTTTCTATTATAAGGAGACGCCGAAGCTTTAGAAAAGTCAGTATCA CGTGGTCTATTGTAGAACAAAGGGATTTATCTAAAAAATCTTCATCATGA TTTAGTAGTTTAGGACTAAGGTTCACTGAAGCTAGACCGGAGTCGttcat aatgcgtgtaatacagtagtataggcgttatatgatattATGATTATTGT TACGTGGGATTTAGTTTGACTAAAATTTGTTAccttccattactttttgc tttatttctactacgTCTGAATTAGCCGTCTAGCTTGCTGGACTGACAGC AGGCGATCGAGTTATGCCTTTATTCAAAGTGATCTTTTCTTGCgatgtta cacgtttttttttttattagaacctagtttataagaacatataggctgaa atttgtcgaaaaattaagaacatcttaagaacatgcccagcctcagtttg gaaaaaagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttttcc tctttttaagcagttttaaccgaatttagNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNa cgcatttaagaacattttaggctgaaaattgctaaaaaaataagcacatc caggctcagccaaattttaggtgttctaataaaaaaaaaaacgtgtattg attTTCCCAGGTGCCCGGAAAATTGTGGCTAAACAGAAGCTCTTTTAATA CGGGGGAGGGGCTGATAGAGAGAAAGAAGGGTGTTAAAGGTAGTAACGGC TATCATGATGATAGATAAGGATATTcacgatatgcaccattgcaatgtct tcacaAGTCCGtggtcttctgacattacatcacggacccaacagctgatt ggttgtaagtgacataaaatcagtcaatacgtcactcgCAACAACATTTT CAATCTCTTTTAaactttcatcttcattttttttttcatttttacagaCG TAGTGAAGAAGAAGACACAATGGTAGCACCATATGGACGTCAAGTGGACG TCTCAAAGCTCACAGATGAAGAATGTAGCCAAATACTTAACGTTATCAGT AAAGACATCTTACTACGGAAATCTGAAAAAGAACGAATAACGTAAGATTT TGTTGTTTATTAATTTGCTAGTTAAAAGTGTTTTCCATGCTAAATCGACC GCTCGATGATATTGCTTTGGAGATACTTTTTATATATCTTGAATTTGCCC ATAGCTTAACTTTCGGGTCCCCTTAGTTGAGGCTTTATTTCATTTCGGTG ATTGGAGCTCAATATACAGCGAACGATTACTGACCTCTTTGCATTCTAGG AATGGAGAACCTTCCATATATTtcgaaaattagaaaatctcaTTAGTAGT CATTGACTACTCGACTCGGGAGGGTTAAATTCGTTGCTTGCTGTAGGTAT ATTATTTAAATTAAAAGTCAGTCCATCTGTTTTTCGTCGTAAGGCATGTA AATCACTTTCCAATTTGCATTTTTGTTTACCACTTGATGAGATAATCCTG TCTTTAAGGATCTTTTCCTGATTTTATGTAATAGCtcattttagttttaa tttcaatgaacttttaaatgatttttaacTGTGAATCACTTGGGTGCCAT CCGTCTTTTACttgtcaaaaagtaaaataaaacttGCTTTCATAACAACT ATGGAAGTcgatttttctccttttaaacTTGACACTAAAACATCACTCTT TTTAGTAGCTAGTATGCTATATCCGTTTTTTAAATTACGGGCGTACCAAA GTGTCCAGTAGCCTCGGTAGTAGGTAGCTGGATGATTTCTCCCTCATCAA CTTATTCGTTCCTTgccaaaaaaatgtcaaaagagATTAAAACTGTAAAA AGAATTGTCACAAAATGTCAATTCTTATTTTCCAAAACATCAAATATGTA TCTTTCGATGTTATGTTAAGTCTTTCCGGGTTTTCTCATAGAATAGAAAA CGTCCGGTGTAATAGCAGTCGAGGAATGTCAATaacattttgataatatt ttcaatGTTGATTGTTGGCATATCAAAACTAGCAAAAATGCCGAAATCCA TACAATGTATACATACTCTAAACTATTGCATCGATGACAATTGATATCTC AAACGAATTCGTGAATCTGATTATAGCCGCGGTAAATATTACTTTCAATC CCAGCCTTTGgtatgaaaaccacgcgggCCGCGCTTTGGATATATCTAAT TGGTCTTGTATAAGTTATTCCGCAACTGTCGAAGAATGTAGCTAATTTCT CAACCTCATTCCTCATTTTTAGGTATGTCAACAAGAAGTTTGAAGATTTT CGGCGTTCAATACGACTCGCAAATCAAGCGCAAAAGAAGCGTATTCCTTT CGACGATTATTGTTTAATATGTGGAAAACATCTATTCACCTTCATCTGTC TTCTCAATCTGGGTGAAGAATGTATATCATGTGAACACCAGTGTTGTAGC ACGTGTCGAAAAGTGTTGATCTTAGAAGGTGATAATTGGGCTGATAGATG TTATATTTGTAAATTATGTTTGGAAAAAAGGTAACTATCTATCTTTAcga agggataatcagatgatgCCCGTAGATTTCTTCCAAANNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNCAAAACCTCTCATCTCATATGCATTACTGATTTTAATTGTCT TAGTACTAAAGAACGTGAGCAAACACCCACCGCCCTTTATCCACACCCGC TGACAAAATAGTTTAGCTGGCCCTCCTCACATGAGAGATGTGAAAATTTG TGCGATCGTTTAAGTCAGTGCGATTAAgttaaaatttaaggaaaataaTT TGATCATAATCTTAGAAGCAAACTTTGacttgaaaattatcgattGCAAT tgcaaaaatatgcaaaaaatgaGAGGTGGTTTGTTTGGTTTTCGATGTTC TAGGTTCAGATTTtatcttttctaatatactCCATAAGGACAAGGTTTTT GTTAAAAACTTGAAGCCTTCGTACTAGATGTTGTGTTTTTCTTTCGTGGT TATTCCACATATATCAAATCTGTTCTTGTGGTTAACCTTCGTTAAAAATC CCATGTAATGCTTTGttattaaaaagctttttttgaagctttaaaatttc aaagataaaaatCTTACTCGAGAGTTTATTGCTTGAGGCTAATTCGTTCT CTAAGTTTTGTAAGACctgatttccaaattttgtaaaCTCCCGATTAAAC AGATTtactattctcaacttcagttgagctagaatctgagaatgtctgtg tgtgtgtctgtgtgtctgtctgtgtgtctgtgtgtctgtcaccaaaactt tagggcaggctggagacttcaaaaatggtccgatttggctgaaattttgc gcacttgatccttgggcaaatccctgggggtatttttttcattttttcaa aattttaatttttggggcctggggacgagtttttcgccaaaacgaggcta aaactttggggcaggctggagacttcaaaaatggtccgatttggctgaaa ttttgcgcacttgatccttgggcaaatccctgggagtatttttttcattt tttcaaaattttaatttttggggcctggggacgagtttttcgccaaaacg aggctaaagcccaaaatgctataatttttcttaagccattaagtttacaa ttgggcatacgaatgatttcaaagatactgaagttgagccagtgcggtta gcacgttcgacagttttGTTATCACTGTTCATTATTGTGACTGGGCAATC CCCCTCCGAGGACTGTTGCCCTTGGATATTTACAttcgtttttcaaaatg aagatgaaaaaaatgcgatttatacgtttttttttcatccaaaatttttg aagcctttggatctTCGGCTCTTAACTATTTGAGTTttaaagtctaaaaa tgttcttaaaatgttcttaatttcaccattttgtgagtatttttgtgcaa ttttctaagaaattgggtgttttagagccttaaaaatgttcttaacttgt tcttaacattttggccatcggagccttatgttcttatacagtttgttctt ataaaaaaaatgtgtaggcCAATATAATCAGAGGGTTGTAACCCCAAcgg ttgtctgtacacagaccaaGTATCTACggattatttcaaaaatcattgcc gtagagggtctgttgtcattgccTTTTCTCATTGCCGTACTATGATTAGC GATaaactctggtacagagtacccACCGTGTGTATGACACGTGTTTTCAT CTACTGAGCTCTGCAATTCCAGTTACTAGGCTAGGTTAAAAATTGATGAA GTTTAATGTGAAATCATTATATGtgtgcagtgccgtagcaactggggggg ggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAtggtttttttgcaaaat acaaagtttttcttttttaatttgtcataattgtctttaagtgcatgttt tgagtgtatttttaagcaatctagagctcaaattttcgaaattccccccc tcgggccaaaccatggttggccctcgcggtatCACTAAACTTCAGTCCCc ctatgaaaatgcttcctacggcactggtGTGTCGTGCAGAGGTGTGTAAT TTCAGGTGAATTCTAGTCCGGACCATAGttttataaagcccaaagggcta gatgtcgggctttaagccatcgcaggcaaaaaaaagtgaatatcggtaAA AATATGTTGGTATTGTTttagaaaacccgcgaagcttctgattggtcaat cgctgaaattctattgtaatgttacgtgacttaggtaggatttcctacct NTcaatcgctgaaattctattgtaatgttacgtgacttaggtaggatttc ctacctaaccacggcacacttttcagcaaaaactttacatctagcccttc gggctttataaatctatggtccgGACATACCtaaggaaggtgtggtccaa tTATGCTTCTTGAACTACAATCGTTGTCAATATATTATTGCACATTTCTG GTGGTCTAATTTAGATACATTACAATAACCTTCTCTCCCCTCCGAACAAT GTTAGTGGGAAAGAAATATTGCTTGGCCGGTCCTTAGCTCGCTCCGACAA CATTAATTATTTGGGGGGAAGAGGGGGGTTGTTCATTTGTGCGCTTTGTA CCATAGGTTTTGTCAATGATAGAGATCTCATAGGGTTGAATTATGTTACT AGTATTTTTAATCACCCTTTGAATCGCTGCAAATATTGCACACGTTATAA CTTAATTTCCACAAAGTATCCCGAGATAAAAAACAATGAGAAATGTGTAA TTGTGCTGACAAAAGCACCATTTAGCACAGCAATTCCGTAAAAATTACTT ACTAATTAAAATGAGCTCAATTTGCGGTTTTCTCGCAAAAATTACAGACA TCAATATTAAAATTGCTCTACTTTAACGATGTCCTGAAGGCTTTTCATTA GTGCAATTTATGTCCGTTAATTTAATTGTAATATGAAAACAAAGCTCCAC AGTAACGAATATTAATGGTTTCGAAATATCTTTAGTGAATAGGTATTACT AGACTGTGAACCAAAGGTCCCTATTTCGATAGCTATTTACCCACACAGTA AGGGGAGGGCTTTATCCCTGTGTTGCTCCACCTTAATACTTCTTTTTAAT TTCTTAGCACTAAGCAGATAAGTATTTGGTGTGACCCGATCAGGGATTGA ACTACTCTGTATCtccgtagtacactctgtgcacattgtctgtttgatga aaaaattcccttacggagacctctgcgatgaaatatgttttataaatagc aacacttctcccCTCTCTCAACAACACttcatcgcagcggtcggtttgaa aaatctcaaatgagaaaagacaatgacaacagaccctctacagcaataaa ttttgaaattagccttaTCTATAATTAGCCTTGGTCTTTGTACAGACAAG GATTGAACCCATGAGCTTGCGCATCGTAGCCGGGTGTGTTACCTTTGCAT TACAGTCAAAAATGGTTCTGATACTTTATATCTATAGGAAACTTCATTGA TAGAGTCCCTACTAAGTATGccataaaaaagtaaaattccAATTGGATTT TGAGCTGTTAGCAATCTAGAAAGAAGCCAGTCTCTTTAACAATGCCTTTT TGTTACTTCTTTTTATTCTCGCAATACTGTGGCTACAAAAGCTTCACAAA GTTACTGAGATTGGGGTATCTGTGAGCGTTTGTTccctattcttgatatg cgtaagtcatttttctaacggaaacaccctaaaaaaacgggatttgaccc ctctctgttactaaaagtagaaacacggaggtcaaaaaccggcttttttg ggtgcttctgttaaaaaatatgacgtcatcttgacttacgcatatcaaga ataggaGAGACTATGCATGCAGGTGACGCTTATTATATTGTTCACTTTAT TTATAGGAAATGCAAACGTAAAACGTTCGAATGGTTTCACGAATTGGTGG ATAAACGATTCAAACGGTTTGGAAGTGCAAAGATATTACGCGCTGTTTAT AAACAAAGGACGACCAGTAAGTCTTGTGTTATTTTGTGCTATCCGTGTTA GACGcatgataaaaaatattgtttacGGTAGACTGTTCGATCGACCAAAA TTGAGGCAAAATCGGCAAGCAATTTTCTAAAGTTGGTATATTGGCCCTCA CCTTAGGAAAATATCTTAATTCTTAATACTAGTTACGCCAGCGAAGCGAT CGCAGAAATCTTTGGACTCGTTTTGACCGACTGTTTTTAGGGTTACCAAA ATTAGCAATCAAAGGGACCTTTGGACGCTTCTTGTCTTTCGGCTCCATCA AAATAATCCGCCACTAGGGGTTAGGGTGTTGCCTACCTCCTCAAGTTTGC CTCCAATTTTAGTGGACCCAAGACTGTTGTACGTACACTTTCGGAATATG TCTATAATGTAGTTTTCTTGTCAGAAACTCGGTTATATTTTTCANTAGAA ACACggaggtcaaaaaccggcttttttgggtgcttctgttaaaaaatatg acgtcatcttgacttacgcatatcaagaataggaGAGACTATGCATGCAG GTGACGCTTATTATATTGTTCACTTTATTTATAGGAAATGCAAACGTAAA ACGTTCGAATGGTTTCACGAATTGGTGGATAAACGATTCAAACGGTTTGG AAGTGCAAAGATATTACGCGCTGTTTATAAACAAAGGACGACCAGTAAGT CTTGTGTTATTTTGTGCTATCCGTGTTAGACGcatgataaaaaatattgt ttacGGTAGACTGTTCGATCGACCAAAATTGAGGCAAAATCGGCAAGCAA TTTTCTAAAGTTGGTATATTGGCCCTCACCTTAGGAAAATATCTTAATTC TTAATACTAGTTACGCCAGCGAAGCGATCGCAGAAATCTTTGGACTCGTT TTGACCGACTGTTTTTAGGGTTACCAAAATTAGCAATCAGAGGGACCTTT GGACGCTTCTTGTCTTTCGGATCCATCAAAATAATCCGCCGAGGGGTTAG GGTGTTGCCTACCTCCTCAAGTTTGCCTCCAATTTTAGTGGACCCAAGAC TGCTGTACGTACACTTTCGGAATATGTCTAAAATATAGTTTTCTTGTCAG AAACTCggttatatttttcatttttattttccatagTCGAACCACGGGTA ATTACGTTACTTGCTCATTGCCGTGAACTGCAACCGACACGTCGTATGTC CTTGACTTCCATGCAGAAACGGTACTCAATCAGTTATTCAAAAGACGACG AAAAAGTTACATACACGGACACTTATgaaaataaaactgaaaatgctGAT AGTGGCACTGAACTACGATCCTATCCGCCGATTCGGCGCCAAAAATATCA TTCTGAATCTGAACTTACTGAAATGTTATCTATGACACAGAAACCAAAAT CTGAGAGTGTAGGTCATAGACGAAAGTCTTCTCTTAACGAAGACGATTTT ATTCGTCGTACGTCTATACTTGACGAAGATGCTAGGCTAGATAGTGGTTA CAATGATTCTGAGAAACAAGCTCTGTTGGCACAACCTCAAAAATCTGTTC CGAAAAGAAAGCTGAGTGCGCACGTGCAACCGGAATCAGTTAAACCAATT ATTATGGAGGATAAAGAACAAGAGGATCTTGATATTGTGGAGAATAAAGA ATTTAGTAAAGGTATTTATTTTTGTATGTTTAATTCTTTACCACACAAGG TCATGTGACCTGCTCTTCAACCAATGAGATTTGATAGTTTCGACACCAAA CAGTATGGTTTAACTAAGTAAAAAGTTATTTACCAAGAACTTTCATGACC AAGaatctaatttttctttctaaagAGTTACATCTTATTTTCTGTACTCT AAATTAAACTAAtctaaaattttatatttgtgCTCAAGTTTGAGCATATT CAAGTATTTTAGTGATCACATATCCAAACCATGACTCTTCCTAATCTTAA TCTTAATCTCGAATAAATTTCatacttctttaaaaaaattttttaaagaa atgttTATGGGTTTAATAATGGTGCTTAGcagaaaaaaatatctaaatat CTCTTCATAATTACATTCTAAATCCAGGCTGTTTGTCGGCTTCTATTTCA GATATACTTTAAAAATCTtggaaaattctaaaatctaaaCTATTTATTAA AGTCTCGTATATTTTACTACTCTCTTAGCCGATTATTTTGGTTTGTTATC GATAACGTTAACAATGTGCTTTGTTGTCGTTTTGTTCACGTGCATTGGCT TCGTTTTCGACGCGTCGGAAGATGGGGCCGAACAGAGGTAAAATAAAATC CCACGTGGAGAAAATACCCTAAAAACACGATAAAACGagactttaaaaaa actttttttgacgaACTTACTTTGGGTTCTATACATTGAAAAAGCACGAT AAAACTAGAcatttaaaaacaacaaaaacattcaaaaacaaaCAGTTGAA AATCTTCTTCTACATTTAAAACACAGACAAAAACCTGAACTTACATAGAT ACAGTAGATACTGAAAATAAAActtgtgtttcttaaaatttaatCTTTAA TTGAGAATAATTGACAATTCTTGCTAACCATTCGTATCTTTTAACTGTTT GATATGTAATGACCAAACGTAACAACAAAGACAATGCACTTAaataattt tcaacattttcaacgttcgttcgttcgttcgttcgttcgttcgttcgttc gttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgg tcgttctttcgttcgttcgttcgtgcgttcgttcgttcgttcgttcggtc gttctttcgttcgttcgttcgtgcgttcgttcgttcgttcgttcggtcgt tctttcgttcgttcgttcgtgcgttcgttcgttcgttcgttcggtcgttc tttcgttcgttcgttcgtgcgttcgttcgttcgttcgttcggtcgttctt tcgttcgttcgttcgtgcgttcgttcgttcgttcgttcggtcgttctttc gttcgttcgttcgtgcgttcgttcgttcgttcgttcggtcgttctttcgt tcgttcgttcgtgcgttcgttcgttcgttcgttcggtcgttctttcgttc gttcgttcgtgcgttcgttcgttcgttcgttcggtcgttctttcgttcgt tcgttcgtgcgttcgttcgttcgttcgttcggtcgttctttcgttcgttc gttcgtgcgttcgttcgttcgttcgttcggtcgttctttcgttcgttcgt tcgtgcgttcgttcgttcgttcgttcggtcgttctttcgttcgttcgttc gtgcgttcgttcgttcgttcgttcggtcGTTCGTAATCATTTTCTCTTCT CTCTTCAGTGACTCTGTGAAAGATGAGGAGGTGGAATAATTCAAAGACCA GAATGGACAACGCGTGACAATAAGAAAACTTCCCAAAAGTCAACACAGAA GAAATTGTGATTCACTAAGAAATGGTCGTCAATTTATCACAATGAAATCG GCTATCACATCCTCGACACTTGTATTTGAATGCATCAGCAAGGTTTTACG AATCGAAAAACATGAACCATTTCTCAACACCTTCAAGTGATGGAAAATTC ACAATAAACTGTATTGCATACGTTGAATTTTAAACTATAGTCTGGCTCAA AAAGAATCTGCAGCAGAAACACAACAGGCTATAACCTTTGATAGAATTAG AACTATAGGGTGGATTTGtacttttggaaaatatttccaTGGTTGGAATA TGATCCAAAAGAAGGTATTAGCtaagaaatttggaaaatgaagatgaaaa taaatttcttaatgACTTTGAAATCGTCAATAAACAACAAAAGAACATTC AACACGAACTAGATTTccttcttcttcactttttcatctaaattttcttt ttcattataTTCAACTGCTGATTATCGTTTCAACGAGTGCCAAACCGCTA TatatagaagttcgaattctatcaaaagttatagcattTTTTGTCACTAT TACAGAATAATTAGTGACAGACTTTAGTAATATGTTGAAAGCTCTCTCAT ATAATTACGAAGCTTTTAACTTTCCAATTTTAAACTTgaatttgaaactt ttaaaatatacaTCATTTTATCATTTAGTTTGTCCTTTTATTATTAGGAT TATGACCTAATAGTTATGGGCTAATCATTTGCTACCCTTTGTCCTGAGTC CatagagccttaaaatgttctcattaTTTTGgctatcaaagccttatgtt tttatatagtttgttctcgtTAAAAAGACATTTACTTTAAGGTTCCGAGT AAACGTCTCCACTTGCTtatcaattttcgaaaatctttcaGACCCCTGCG TTCTTATTAGGAGCCCCCCGCCCTCgtctatttatttttgaaaatatttt caactatCACAAGCTtaattgctctaaatagcctggtttTAGTTTATATT TGCCTtatttaagggggggggggtttaagaGGTACAATTTCGGACCATCC TTTATTTGGAcccctcccccgtttattagatcttgaaaaaaatttgaacc cTCCCTTTTATTCGACCCCACCCCTACTGTTTGGAACCTGAGTGTTTATT AGCTTTTCACTCTACTGAGTACTGATGGTGTGTAATATTTTCTCTTGCGT CCATTGTTAACAAAAATTTAGTATGATGGACGATATTCATTAAAGTTTca gactttttaatttttattacgtCGAGTTAAGCTTTTATGTGTTGTGtata ttttagtttttacatttggttttttaaagaaatttttggttttgccattt ttttgtAGAGGATTGTTGAAAGTCCCATTATTTCTACGACATTATAAAAC ATatcattttcaagaaattctaaatttaacatttttttcgcTTCGCTTCG CTTCGCTTGCTTGGTCTGAGATTTTAAAATTCACCaactttttatacttt tttgacATTGTTCAACTATTActtaccgggtgacccacgaaaaagttcag acgtttctcgacgtcttgaggccgaacaaatgtcccaaagtgcttggagt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013449XLOC_013449Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023919-exon-sc0000465-1491911889:52797..52843TCONS_00023919-exon-sc0000465-1491911889:52797..52843Clytia hemisphaericaexon
TCONS_00023919-exon-sc0000465-1510915933:52797..52843TCONS_00023919-exon-sc0000465-1510915933:52797..52843Clytia hemisphaericaexon
TCONS_00023919-exon-sc0000465-1575043694:52797..52843TCONS_00023919-exon-sc0000465-1575043694:52797..52843Clytia hemisphaericaexon
TCONS_00023919-exon-sc0000465-1491911889:59494..59637TCONS_00023919-exon-sc0000465-1491911889:59494..59637Clytia hemisphaericaexon
TCONS_00023919-exon-sc0000465-1510915933:59494..59637TCONS_00023919-exon-sc0000465-1510915933:59494..59637Clytia hemisphaericaexon
TCONS_00023919-exon-sc0000465-1575043694:59494..59637TCONS_00023919-exon-sc0000465-1575043694:59494..59637Clytia hemisphaericaexon
TCONS_00023919-exon-sc0000465-1491911889:60819..61076TCONS_00023919-exon-sc0000465-1491911889:60819..61076Clytia hemisphaericaexon
TCONS_00023919-exon-sc0000465-1510915933:60819..61076TCONS_00023919-exon-sc0000465-1510915933:60819..61076Clytia hemisphaericaexon
TCONS_00023919-exon-sc0000465-1575043694:60819..61076TCONS_00023919-exon-sc0000465-1575043694:60819..61076Clytia hemisphaericaexon
TCONS_00023919-exon-sc0000465-1491911889:67081..67190TCONS_00023919-exon-sc0000465-1491911889:67081..67190Clytia hemisphaericaexon
TCONS_00023919-exon-sc0000465-1510915933:67081..67190TCONS_00023919-exon-sc0000465-1510915933:67081..67190Clytia hemisphaericaexon
TCONS_00023919-exon-sc0000465-1575043694:67081..67190TCONS_00023919-exon-sc0000465-1575043694:67081..67190Clytia hemisphaericaexon
TCONS_00023919-exon-sc0000465-1491911889:67633..68157TCONS_00023919-exon-sc0000465-1491911889:67633..68157Clytia hemisphaericaexon
TCONS_00023919-exon-sc0000465-1510915933:67633..68157TCONS_00023919-exon-sc0000465-1510915933:67633..68157Clytia hemisphaericaexon
TCONS_00023919-exon-sc0000465-1575043694:67633..68157TCONS_00023919-exon-sc0000465-1575043694:67633..68157Clytia hemisphaericaexon
TCONS_00023919-exon-sc0000465-1491911889:69855..71546TCONS_00023919-exon-sc0000465-1491911889:69855..71546Clytia hemisphaericaexon
TCONS_00023919-exon-sc0000465-1510915933:69855..71546TCONS_00023919-exon-sc0000465-1510915933:69855..71546Clytia hemisphaericaexon
TCONS_00023919-exon-sc0000465-1575043694:69855..71546TCONS_00023919-exon-sc0000465-1575043694:69855..71546Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000465supercontigsc0000465:52797..71546 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0 0 0 0 0.0457116 0 0 0.0468761 0 0 0 0.32849 0.292519 0 0 0.0602754 0.333335 0.0379049 0 0 0 0 0 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00023919 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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