TCONS_00023961 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00023961
Unique Name	TCONS_00023961
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2876

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000468:142388..153448+

transcript sequence

>TCONS_00023961 ID=TCONS_00023961|Name=TCONS_00023961|organism=Clytia hemisphaerica|type=transcript|length=2876bp
TTAGACAGcatttgataaacaaaataaatagaaaatctgACATCCGAAAA
AATGTCATTATGATTTGGCTGCTTATGTTGGCTTGTACCTTGAATGTCCA
AGGTTTGGAGTTGAATGATTTGGAAAACTATGAATTCATTCGTCCAATGC
AAATCAATGAAAACGTTCGCAACAAAAGGGATCTTTCAACTCTAAACCAG
GGTGTCCATTTTGAAGAAACAGTTTTCCATTTCCATGGTTACGGAAAATT
ATTCAAGATCAGACTCATCAAAAATAAcgtgattgctcaACCAGGAATTC
GACTGATCAGTCAAAATGAAGATGGAAGTCATAAGATTGATAGGTTCAAC
CAGCAATGCCACTACCATGGGAAGATTGAGAGCGAGCACAACTCCTCCGT
TGTCATATCAACCTGTCATGGGTTGCGGGGGTTGATTCAAACAGAAGGAG
GAAAAGACTACTTCATCGAGCCATACAATGCAGAGGTTGTAGATGGATAC
ATCATGTACAGAATGGAGGATAtgaaaaataaaccaaaaaacTTTGgtCA
TAAAAGACACGAACCGATAGATGACGTCGAATTCCAAACAATATTAGAGC
ATGATTCTAATGAGAAACGACATCGTCGTGCGCGACGATCAACCTCCATT
TGGAAATACGTGGAAACAGTCGTGGTGATTGACAAACGAAAGCATGACTT
ATGGGGAGGAGACCTGGAAGCGAGTCAAACAAAAGCCGTCGAACTAATGA
ACTACGTCGATGCGGTTTACAAAACGATGAACGTTCGCATTGCATTAATC
GACGTCATCGTTTGGAACCAGAAAGACATGATCAACGTTAGCGAATCTGC
AGGGACAACGCTCACCAATTTCAGGGCGTACACATTGAATGTGATCAGCG
GCGAAATGGACATTTATCATGATAACGCACAGCTCATCACAGGCATAGAC
TTTACAGGTTCAGTGGTCGGGCTAGCTTCTATTGGTGATGTTTGTTCAAA
GTCTTCTGCTGCTGTAAACCAGGACCACTCTTCCAACCTTGCCATATCTG
CAAACACTGTAGCTCATGAATTGGGACATAATTTAGGATTCTATCACGac
aCTGGAGGTTGTGTTTGCAGCAATTCACCCTGTGTCATGTCAGCATACGC
GCCgagCACCCAGGTGAAAGGATTTACTGACTGTTCTGTCGACACTTTCA
ACCAGCGAGCGAACAACAGCAGATATCCTTGCATTTATGATTTACCGGCT
AAGTTATTCGAAGAGCAGCAATGCGGAAACGGATATCTGGAAGAAGGTGA
AGAATGCGACTGTGGAACGGAACAGGATTGCAGACTTACGGGAGCCGACA
AATGTTGCAACTCGACTACGTGTTTGTTAAACGAAGGGGCGAAATGTGCA
ATCGGTTCTTGTTGCGATGATTGTCAGTTCAAAACAAAAGGCTCACTTTG
CAGATCGATGCAACATGATGATTGTGATTTGGAAGAATATTGCACCGGAC
AATCCGAAAATTGTCCGAGAAATGTATACATTGAAGACGGAAAACCTTGC
AACAATGAAACAGATTTTGCAAGATACAAACAACACAATGTGAAACATTG
TGGGGAGAAACGGGCGCCAAAGCAGAGAATCCATGTTTCAACGCCAACGT
CGATGGGGACGGCTTTGGTAACTGCGGAACCAAAGAAAACGGAGATCATA
TTCCTTGCTCAGAAACAAACAAGCTTTGTGGAAAGATTCAATGTGACAGC
AAACCAGGAACTAGTCTACCGAGGTTTCCGAAGATCGGAAGTAACCGTGC
GGTGAAGATCACAACGTATTACGTCGGTGGGAGATCCTTCGACTGCAGGG
TTGTGAAGATGGATTACCCGAAGAATTTAGATGATCCAACGATGACTTTC
GATGGAACAAAATGTGGTGACAATTCTgTCTGCATCAGCAACAAATGTGT
AAACATTAATTCATTACCTCATCGGAAGACGTGTGAACCAGGTCGATGTA
AAAATGGAGGGGTTTGTAACAGTAACGGAAATTGTCACTGCCCGAATGGA
TGGGCGTGCCCGTATTGTAATGTGACCGGTATCGGAGGGAGTTTGGATTC
CGGACAAGGATGTTTTAAAAACGAGACAGACGGAGGTGAAGGTGGAGGAG
AAGGTGGCGGGGAAGGCGGTGGAAAGGGCGGACAGGGCGGAAATTCAGGA
GAAGAAACAGACGAATACCTAGTTTACTTGTGGCTCCTCCTGATCCCCGT
CGTCATCTTGGTCGTGGTCCTTCTTATCCTCAAGAAAGATGTCATCTGCA
AAAAGACCAATCCTAAGCGGCAATGGAGAGTTTCGGCAAGTGATGGTGGG
GCATACGGCTCCAATCAAACTGGCCAAAAAATAAACACCGTCAAAGTTCA
AGAAAATGATCATTCAGAGCATTTCGTCAAAAATCCGTACGCTTAAGACT
TGCAGATGGAAAAGATGTTTTCTTCAGGACAAACTCTTGTTACAAGTACC
ATTTTATTACAGAGCTTTAAGTGACGGAAccattcttttataaaaaattt
tggacATTGTTTTAAGAAATTTAAGTGATTTCAAAATCACGATTAGGGAT
TACACGAGAAATCCCGCTCAAATCAGATGTATTCATTTAAAAGATCAATG
CGAccataacttgaaaattttctgCGATTTAGTTTAGTTTAGCTATCAGT
TTGTAAATATCTAGTTTTAGAATTTTCATAGATTTTATACCTTCGGtgtt
tgaatttcttttcaagagATATTTTAATCTtattgtaaattattttgaat
tataatcaagttataatttcaaaaatcttaacaAACTATTTTCTTCATTG
AGCTGCTTTGGTGCCCTATGAACAGA

Run BLAST on NCBI

transcript from alignment at sc0000468:142388..153448+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00023961 ID=TCONS_00023961|Name=TCONS_00023961|organism=Clytia hemisphaerica|type=transcript|length=11061bp|location=Sequence derived from alignment at sc0000468:142388..153448+ (Clytia hemisphaerica)
TTAGACAGcatttgataaacaaaataaatagaaaatctgACATCCGAAAA
AATGTCATTATGATTTGGCTGCTTATGTTGGCTTGTACCTTGAATGTCCA
AGGTAAGTGTTTACTTTTTGATGGGGATCTTTATTTGTTGCACCTCTCAT
TAGCAGGATAGACCAGCGTCACAGATTCAGAAAAGGcctgaaaaatgatt
tttttgtaggacaccccttagatcagggcaaatttttgatattatgctcc
taatagggtgtagaatcgacaaaaaaaattttcccttcgaatatcctgca
gttttcgagtgaatcaatttttagttaatcgatagaacttatcaatgatt
ttttctggaaattcttctggaataatgctgacgtcatcggaaaacgccaa
aaacgtcgattttcgCCTTAATTGCCATTTCTCGTCACCAGGTCGTCgaa
accccattttctttatctacttttcacgttGAATCCGTTGGTaacctcag
atatttgattttcagacttcgaaaaaaccgttagtaaaggggagATAAGT
TCTaacgattaactaaaaatcaattcactcgaaaactgtaaaagattcga
agggcaattttttttgtcaattttacaccctattaggagcacaatatcaa
aaattttcgctgatctaaggggtgccctacgaagtgacacaattcactac
ctcggccgctggtaTAGGATGTTCTATTATCAATCTCGTTTGGTCTGCGA
AAAATATTACCACTCCTTTATAACTGTCAGCATAAAGTTTGCATTGCGAA
TATAATAAAGGACAACACCCATCTAGATCCTTTATTGTTTTCGAGTGTGA
TTTTTAAGGCTACTTTTTCAATGAGGCAGCGAACCCACCCATAGATGTGC
GATGTATGACCAGTATTTCTCTAATTTACTTCTTTTCACCGATGAAGGTT
TGGAGTTGAATGATTTGGAAAACTATGAATTCATTCGTCCAATGCAAATC
AATGAAAACGTTCGCAACAAAAGGGATCTTTCAACTCTAAACCAGGTTTG
CTATTGTTAATCATCCATCCATGCTTAATATACTCATTAAAAACAACCTG
AATGATCCTGAACCGTAATAGCTTACTTCTCCCTCAAGTCCCCCCCCTCC
ATCTTCAAATTGATGAGAAAATGTAACCAAAACTTTAGGCTGGATTTCTG
TGCAATATTTTTACACATTTTCCAATCTTCCAGGGTGTCCATTTTGAAGA
AACAGTTTTCCATTTCCATGGTTACGGAAAATTATTCAAGATCAGACTCA
TCAAAAATAAGTAAGTATCTCAGATCACAAAAGTCATTATTCAgttgaat
tgttttgttgtctCAAGCTGTTTTTAACCATTATAATTGGTCAATCAATC
ATTGAAAGAATTTTAGTGGTTTAAAGTAGTTATCCAGAAATCAAGTTTTC
CTCATCTTtcttatagcgtgattgctcaACCAGGAATTCGACTGATCAGT
CAAAATGAAGATGGAAGTCATAAGATTGATAGGGTGAGGTTTTGATTAAC
AAACTTTACTATTCACTTCTGCCAAGCCATCCCGAGTTATAAAGACCTTA
TTCTGCCTCGAACTGGAGcgatttatttgtttttatcctAACTTAGAAAC
ACCCCTGCCTCTTTGTGGCTAACAGAGTACCACCCAACTACTGTGATGAA
AATTCACTAGTGAGTAGTATTATTAGAGGtggtaaattttcttttatttt
cactggATTGTTATAATCTTGGATTAACTTCTTTTCGATTATGAGAAAAT
CATCAACCCTCCTAAAATAGATACTTCATCACCCCTCATAATATGAGTTT
TCTGGTTTGTTTTAAAAAGCACTCAAAATAATGACCAAACTATCTTCAAT
GTCACTTTGACCATAAAAGCTTAAGCATTTTACGCATGTTTGGGAGAAGG
CTTTAATGTAGCGCTTGTTGGAGAGAAAAAGTAACATAATCTATCAATCT
TGCCATTTAAGTTCAACCAGCAATGCCACTACCATGGGAAGATTGAGAGC
GAGCACAACTCCTCCGTTGTCATATCAACCTGTCATGGGTTGCGGTGAGT
GGATTTCTCGGTCATGTGAGAAGGAATGATTTGTGAGACTTTTTATATTA
ACCAAGCTCGCACGAAATGTTATTTCGATTAACATCGTTTGACCTTTGAT
CTAGTATCTTTAAAGCAAAACTGCAATGGCCATAACTGTCAAAGATGTAG
TCTTTGGTCTTTTTTCTACTTCTTAATTCTTGTTCAGGGGGTTGATTCAA
ACAGAAGGAGGAAAAGACTACTTCATCGAGCCATACAATGCAGAGGTATC
AAACAATTCTGTTGTTTATTCGTAATAACACAAAACGAATATTGAACATT
GCTATGTTCTGTAAGCGCTGTAGCGATACTTTGAAGATCTCCACTGTGGA
TTATTTTAAAAAGAGTGTTCAAAATTCTAAATGGAAAGTCTGTTCAATAT
GCCGACAATGCCATTTTTTAACAACATTGTTAAATTTCCTCCAACATACC
AAACATAGCAAGAATGATATCCAATGTTGATTCTCGTAGGTTGTAGATGG
ATACATCATGTACAGAATGGAGGATAtgaaaaataaaccaaaaaacTTTG
GTAAGTCGCTCAGATGGTTTTCACAGTTAGAGCcatgtctcacagccccg
gtgaaacatttttcttcagtggggataaaaatccctATCCATATCCCAAT
GGAGATAGAAAtcttattgtttaaaaaatccaGTAGGATAACTAgtgttt
tggagtgcaattttttgaaattttagagatttttgagtggggatgaaatc
aaagtctgACAATCCAGAGTATTTCCCCACCGGggaccaaatttttgcca
aattttctatTGGGATGGGTTCCCAGtcggtctgtgacacaggggtgtac
agTTGAACTGTGTTTTAAATTCGGTGAAATAGCAAATTGGTAAATACACA
AGCTTCAGTAGCTTCAGTAGAATTTAcccttttcttttatttcaggtCAT
AAAAGACACGAACCGATAGATGACGTCGAATTCCAAACAATATTAGAGCA
TGATTCTAATGAGAAACGACATCGTCGTGTACGTATGAGTATTAATGGAT
TTTTATGAAGGCTACTGTTGATACTTGATGGATGCGGGTGCGTTCACACT
GGAAGGTTTCCTTAGTAAAACAGTAGttataaaatcttttaaaggTTAAC
CACATTGCATTGTCACTttgatttcatttcatttcattaaaaGTCACAAG
CTCCGTTATCTTAAAGTTAGGGTAGGAGCAGCTTTTACCCAGTGTAAACG
TGCCCTAAGAAATCTGTTTAAACTATTATCATATTCCAATATCCATTAGG
CGCGACGATCAACCTCCATTTGGAAATACGTGGAAACAGTCGTGGTGATT
GACAAACGAAAGGTGAGGCCCTTAGAGATTCTTAACTTTTGATATCTTCT
TAAATCCATCAATATGACTGACATGTTGTGTATAAGTAATACCCCTGCAA
GCGCTCATATTacatcaattattttttttgtggCAATTTTTATGCTAAGT
AATTTTCGATCATATTTTCTTCAATTGCAGCATGACTTATGGGGAGGAGA
CCTGGAAGCGAGTCAAACAAAAGCCGTCGAACTAATGAACTACGTCGATG
CGGTGAGCTGTTGTTTTCCTTAACGTGCTTGATCGAATGAGTTATGTTGT
AAGGAGGAAGGAGGTGGTCTGAATTTTTGTCGGTATAAATATTTATGCAT
CATAATTTCTTGTTCAGGTTTACAAAACGATGAACGTTCGCATTGCATTA
ATCGACGTCATCGTTTGGAACCAGAAAGACATGATCAACGTTAGCGAATC
TGCAGGGACAACGCTCACCAATTTCAGGGCGTACACATTGAATGTGATCA
GCGGCGAAATGGACATTTATCATGATAACGCACAGCTCATCACGTAAGTG
CAGCTTGATGTGGATTGAACAGTTATCAGGATATAAAATTGATTTCTTTC
GTCAAGACGTTGATAACTTTTACTCAGATGACAAAATttccatgaattat
ttttcacccAAACTCTACCATAGAACTGTTTCTGCTGACTTTGTACATGA
GATGCTTTCTCAATATTTCAATGGAAACTCATTCTTTTTAGAGGCATAGA
CTTTACAGGTTCAGTGGTCGGGCTAGCTTCTATTGGTGATGTTTGTTCAA
AGTCTTCTGCTGCTGTAAACCAGgtgcaaaattttaaacttgGGCAAGCT
ATAATAATTGCACCTACCTTGCACAAAATACATTTAGCTATTTTACTACT
gtgatattttcaatatttcaattgTCTCTGAAATTACTTAGCATTTGAGA
GAATAGTGAGAATTTTTCAATATAGTAATAGGATCCTTGTTTGTTGGCAA
GATTTTGGATTTGAAGTTATTGGTGATATGATTAACTGATTATTTACATT
TCAGGACCACTCTTCCAACCTTGCCATATCTGCAAACACTGTAGCTCATG
AATTGGGACATAATTTAGGATTCTATCACGacagtaagtgatattttata
GAGAATAACACTTTTAGAAAATGACCTGTTCTATTTGAGCGTCCCCTTCA
GCTAAGGATGTTAGCGTTAAAATCGCTTTCTGTTTGGGCCTAGAAAAGCA
TTTGGCTTTGAAAGGGAGATGGTCAACGAATTATTTTATCCCAAGTTCTT
TTGTTACCCTTCCTATTCATTTCCAAACAGGCCTCAAAACGTTAATTCAT
TGAGTTATCGtttactgaaaatattttctggtaTTTCAGCTGGAGGTTGT
GTTTGCAGCAATTCACCCTGTGTCATGTCAGCATACGCGCCGTAAgtcaa
ataaaacttttcaagtTGGAACATTATAGGTCTAATTGGGTCATTGGGTT
TTACGGTTTTACATAGNAGTTGGAACATTATAGGTCTAATTGGGTCATTA
GGTTTTACGGTTTTACATAGTGATTGCCAGTCAGGGTATATCATATTGTG
TGATTAATTtctcttaaaaatatttttttcaggagCACCCAGGTGAAAGG
ATTTACTGACTGTTCTGTCGACACTTTCAACCAGCGAGCGAACAACAGCA
GATATCCTTGCATTTATGATTTACCGGCTAAGGTAAATTTCATttcacaa
aagaatttatcctttcctttcaaaatttaaatattctaaAGGTATTCAAT
GCTTGTTTATGATAGTTTACTAAGCTTAATAGGAGATTCTTCTTTTTGAT
TCGAAATATCCTTTGATTTCACGATATTTTCTGGCCGCCCCCTTTAACAA
TTTCTAATCCCCCTAACAGTTATTCGAAGAGCAGCAATGCGGAAACGGAT
ATCTGGAAGAAGGTGAAGAATGCGACTGTGGAACGGAACAGGTTTGTTAC
CCTTTCCAGAAATCATAACATGAAACCCAATTATTTTACCGAAAGATTTT
CTTAGAAAGAATTTTACCTCGGATGCACTTCCATTTTTGTTCAAAGTCtc
aaagaatttaaaatttttgcagCCAAAGTCTCTaatgtagattttttttc
tcaaaacacgTCCTTTCTCTTTTCTAGGATTGCAGACTTACGGGAGCCGA
CAAATGTTGCAACTCGACTACGTGTTTGTTAAACGAAGGGGCGAAATGTG
CAATCGGTTCTTGTTGCGATGATTGTCAGGTAGTTCTTCCTTTAATTTCc
agaaacattttcaattgaCCTTCGCAATGATTCTTACTTTACACATTCAT
TGAAAAATAAGTACCCCATGTTTATGGTACTCCATAACTTTCAATTTCTT
AGAAATGAGTAATTTAACAGTCGAGAATTTTCTTCaacgatactttaatt
agggcaCAATTTTGAGAATTCAAGGAAAGTTATTTGCATCAACGAGTGAC
ATTCTCTTTTCCACGATTTCAGTTCAAAACAAAAGGCTCACTTTGCAGAT
CGATGCAACATGATGATTGTGATTTGGAAGAATATTGCACCGGACAATCC
GAAAATGTAAGTTGAATCTTGATCCAAGAATTTGACTATTTTCGAACTGC
GTCAAACGTAAAAGTTTTATTCAAAAACGCTTGAgctgtgtttttttatt
tgtaaaacgAGCTTTTCAGAAGGTCGGCAAACCAGTAGCTATCTGCGACA
AATGTTAGGAATAATCATGAGTGACGACTTCTGTAACATGTTCCCAATGC
TTTAATTTGAGTGTCCGAGAAATTTTTACATTGTTAATTTCATTGTCCGA
GGAATACTTACATTGTTAATTTCAGTGTCCGAGAAATGTATACATTGTTA
ATTTCAGTGTCCGAGAAATGCTTACATTGTTAATTTCAGTGTCCGAGAAA
TGTATACATTGTTAATTTCAGTGTCCGAGAAATATATACATTATTAATTT
CAGTGTCCGAGAAATTTATACATTGTTAATTTCAGTGTCCGAGAAATGTA
TACATTGTTAATTTCAGTGTCCGAGAAATGTATATATTATTAATTTCAGT
GTCCGAGAAATTTATACATTGTTAATTTCAGTGTCCGAGAAATGTATACA
TTATTAATTTCAGTGTCCGAGAAATTTATACATTGTTAATTTCAGTGTCC
GAGAAATGTATACATTGAAGACGGAAAACCTTGCAACAATGAAACAGTAA
GTAGTCTGCCAACATAcgtagatagatagatagaatgGGTATTCGATATT
TAACGTGGATTGCCTAGTAACTAGGACTTTCAGACATTCTTTCGATTGTA
CTCACGGGGTCCACAGCCAGCCGGTTTGGCTATCATTGgattgaacggaa
cattggaagaaGCGGGAAATCCTTGGTTTGAAACGCTAACGCCTTTGAca
acttggccatcgctccttaACTCattagatgttttttttaatcataaaaa
tgtttcatttatcTCAACTACACGCTAGTACGTTTTACAGCAGTTCCCAA
TCCTGCTTAAACAATTTTGGTCTTGATCTATAACGTGAAATTTATTTTAA
GGGAGTCACTCAAGGACTTTGTTATTCAGGATTTTGCAAGATACAAACAA
CACAATGTGAAACATTGTGGGGAGAAAGTAAGTCCGCTAATCATATGGTT
GTGACGAAACTATCATATCTGTTAAAGTTGATTTGAAAAAACCCTAGCAC
TGTATCTCTCGTGTCAAACCAGTAAATgtttaaatgtttctttttttaat
tatttgcgTTGATATAACTTAAAAACGTGTTGTTTActcacaaaatttga
aaattcattattcttTTCTCTTCGCACTAGCGGGCGCCAAAGCAGAGAAT
CCATGTTTCAACGCCAACGTCGATGGGGACGGCTTTGGTAACTGCGGAAC
CAAAGAAAACGGAGATCATATTCCTTGCTCAGAAACGTAAGTTTATAACT
TCCTTTCAAATCACCGCATGTTCACGTTTACGTTGGTTAAAAAAACCGTA
TTTGTTTTTTGAGCGACGTTTGACCCATTTAATACTGTTTTGAGGAATTT
TTTCGAACTGTTCTAACCCTTTTCTTTCTTCTGTTTTTTCTGCAGAAACA
AGCTTTGTGGAAAGATTCAATGTGACAGCAAACCAGGAACTAGTCTACCG
AGGTTTCCGAAGATCGGAAGTAACCGTGCGGTGAAGATCACAACGTATTA
CGTCGGTGGGAGATCCTTCGACTGCAGGTAAAGAATTCATATCTACTTCA
ACTGCTTACTTTTAAGTTACTAAACATACGTTTACAACAACATAAATTCA
TGGAacatttcttttgatattttaaggTTTATGTTAGGTCTacgttttag
attttttttgacNTTACTTTTAAGTTACTAAACATACGTTTACAACAACA
TAAATTCATGGAacatttcttttgatatttttttggacaTTTTAGGGTTG
TGAAGATGGATTACCCGAAGAATTTAGATGATCCAACGATGACTTTCGAT
GGAACAAAATGTGGTGACAATTCTGTAAGATTTTTCATATCATGGAACGT
tcagttttttgatttttgaatccaACAATAGCTCAAATACTAAAACTTTG
TTCTGATTTCAaatgttttagataaaaaatttacTTAGCCGattggcttt
tccagaaaaaaatcgtataccccctgttgagaaGGTCCATCCTTCtatgg
ctggaaatgctgtaccCCCCTGGAACTCCAGGTAAATTCAggcttaaacc
cctctggaattatGAATTTtcgtaggatttaaaaagctacccatggaatt
ccagttatttttgacagatttttgtatctccctatggaattccaccACAT
ATGAAACCTTGCTCCCTTGGAACGAAAATAGACCTcatcaacagggggta
tacggttttctTCGGGAAAAGCCCAACGAGAACTCCCATAATCACACTGT
AATTCATTTAATTGAATGATCTTCCACCATCCTTGGATATTTTGAAGTAC
GCAGAggttattttgatgttttaggTCTGCATCAGCAACAAATGTGTAAA
CATTAATTCATTACCTCATCGGAAGACGTGTGAACCAGGTCGATGTAAAA
ATGGAGGGGTAAGTAAAAAACAGGTCGTATTTTTAACAAGCTATTAAATG
AACGCAACAGAGACTTTTCCTTTCATTCTTCTACAAGACCTGGTTGATTT
CATAATGCCCGTTATACTGGATTTATCCTTCGGTCCAATTGATTTCATTA
TCGAGGTTAATAATCAAAACtagaattattttcaatttttgatttNTCGG
TCCAATTGATTTCCTTATCGAGGTTAATAATCAAAACtagaattattttc
aatttttaattcagGTTTGTAACAGTAACGGAAATTGTCACTGCCCGAAT
GGATGGGCGTGCCCGTATTGTAATGTGACCGGTATCGGAGGGAGTTTGGA
TTCCGGACAAGGATGTTTTAAAAACGAGACAGACGGAGGTGAAGGTGGAG
GTACACAAATTTGAATTTAGACGGAAATGTTCATTTTGATTGAAGCCAGT
GCAACTTTCTAATTGCTTAAAAGGCATTATTTTGAGCTGAATACACTTTC
TCAATCCCAGTAACCACGAAAATGATTCTTATAGGGAGGGGTAACTAAAC
TCTTGCACACTGTCTTCATACAAAAgtttccattgtttttttctatGGCA
GGAGAAGGTGGCGGGGAAGGCNGCTGGAAATGCTGTACCCCCCTGGAACT
CCAGGTAAATTCAggcttaaacccctctggaattatGAATTTtcgtagga
tttaaaaagctacccatggaattccagttatttttgacagatttttgtat
ctccttatggaattccaccaCATATGAAACCTTGCTCCCTTGGAACGAAA
ATAGACCTcatcaacagggggtatacggttttcttctggaaaagcccaac
gAGAACTCCCATAATCACACTGTAATTCATTTAATTGAATGATCTTCCAC
CATCCTTGGATATTTTGAAGTACGCAGAggttattttgatgttttaggTC
TGCATCAGCAACAAATGTGTAAACATTAATTCATTACCTCATCGGAAGAC
GTGCGAACCAGGTCGATGTAAAAATGGAGGGGTAAGTAAAAAACAGGTCG
TATTTTTCACAAGCTATTAAATGAACGCAACAGAGACTTTTCCTTTCATT
CTTCTACAAGACCTGGTTGATTTCATAATGCCAGTTATACTGGATTTATC
CTTCGGTCCAATTGATTTCCTTATCGAGGTTAATAATCAAAACtagaatt
attttcaatttttaattcagGTTTGTAACAGTAACGGAAATTGTCACTGC
CCGAATGGATGGGCGTGCCCGTATTGTAATGTGACCGGTATCGGAGGGAG
TTTGGATTCCGGACAAGGATGTTTTAAAAACGAGACAGACGGAGGTGAAG
GTGGAGGTACACAAATTTGAATTTAGACGGAAATGTTCATTTTGATTGAA
GCCAGTGCAACTTTCTAATTGCTTAAAAGGCATTATTTTGAGCTGAATAC
ACTTTCTCAATCCCAGTAACCACGAAAATGATTCTTATAGGGAGGGGTAA
CTAAACTCTTGCACACTGTCTTCATACAAAAgtttccattgtttttttct
atGGCAGGAGAAGGTGGCGGGGAAGGCGGTGGAAAGGGCGGACAGGGCGG
AAATTCAGGAGAAGAAACAGACGAATACCTAGTTTACTTGTGGCTCCTCC
TGATCCCCGTCGTCATCTTGGTCGTGGTCCTTCTTATCCTCAAGAAAGAT
GTCATCTGCAAAAAGACCAATCCTAAGCGGCAATGGAGGTTTGTCTTTCT
CTGAAGGCTTCTTTTTAATCTTTCACATACACAGTCAATACTGCGAATGT
TAATTTGGTTTTATTTCAGACTTggttttaatatatttttttcattacaT
ACATCAAACTCAGCAATAAAACTTCCCTTACTAATTTTCATATGcaacat
tttttctttgtagAGTTTCGGCAAGTGATGGTGGGGCATACGGCTCCAAT
CAAACTGGCCAAAAAATAAACACCGTCAAAGTTCAAGAAAATGATCATTC
AGAGCATTTCGTCAAAAATCCGTACGCTTAAGACTTGCAGATGGAAAAGA
TGTTTTCTTCAGGACAAACTCTTGTTACAAGTACCATTTTATTACAGAGC
TTTAAGTGACGGAAccattcttttataaaaaattttggacATTGTTTTAA
GAAATTTAAGTGATTTCAAAATCACGATTAGGGATTACACGAGAAATCCC
GCTCAAATCAGATGTATTCATTTAAAAGATCAATGCGAccataacttgaa
aattttctgCGATTTAGTTTAGTTTAGCTATCAGTTTGTAAATATCTAGT
TTTAGAATTTTCATAGATTTTATACCTTCGGtgtttgaatttcttttcaa
gagATATTTTAATCTtattgtaaattattttgaattataatcaagttata
atttcaaaaatcttaacaAACTATTTTCTTCATTGAGCTGCTTTGGTGCC
CTATGAACAGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_013464	XLOC_013464	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000468	supercontig	sc0000468:142388..153448 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.000799084	0	0	0	0	0	0

Blast

[Close]

BLAST of TCONS_00023961 vs. Swiss-Prot (Human)
Match: ADA19 (Disintegrin and metalloproteinase domain-containing protein 19 OS=Homo sapiens GN=ADAM19 PE=1 SV=3)

HSP 1 Score: 257.299 bits (656), Expect = 1.979e-97
Identity = 162/447 (36.24%), Postives = 236/447 (52.80%), Query Frame = 3

Query:  243 GKLFKIRLIKNNVIAQPGIRLISQNEDGSHKID--RFNQQCHYHGKIESEHNSSVVISTCHGLRGLIQTEGGKDYFIEPYNAEVVDGYIMYRMEDMKNKPKNFGHKRHEPID-DVEFQTILEHDSNEKRHRRARRS-TSIWKYVETVVVIDKRKHDLWGGDLEASQTKAVELMNYVDAVYKTMNVRIALIDVIVWNQKDMINVSESAGTTLTNFRAYTLNVISGEMDIYHDNAQLITGIDFTGSVVGLASIGDVCS-KSSAAVNQDHSSNLAISANTVAHELGHNLGFYHDTGGCVCSNSP----CVMSAYAPSTQVKGFTDCSVDTFNQRANNSRYPCIYDLP--AKLFEEQQCGNGYLEEGEECDCGTEQDCRLTGADKCCNSTTCLLNEGAKCAIGSCCDDCQFKTKGSLCRSMQHDDCDLEEYCTGQSENCPRNVYIEDGKPC 1550
            G+   + L KN  +  P          G+ +    +    C YHG +     SSV +STC G+RGLI       Y IEP   +    +++YR E +K  P N G +  +P   D   Q   +    +KR RR +R   +  KYVE  +V D  +      D +A++ K +E+ NYVD  Y+++N+RIAL+ + VW   +M  VSE+  +TL +F ++   +++ +   YHDNAQLITG+ F G+ +GLA +  +CS   S  VN DHS N    A T+AHE+GHN G  HD+  C CS S     C+M+A       K F  C+    ++   +    C+ ++P    L+  ++CGNGYLE+GEE     +        + CCN++ C L  GA+CA GSCC  C+    G+LCR  Q   CDL E+CTG+S +CP N Y  DG PC
Sbjct:   73 GRELILDLEKNEQLFAPSYTETHYTSSGNPQTTTRKLEDHCFYHGTVRETELSSVTLSTCRGIRGLITVSSNLSYVIEPL-PDSKGQHLIYRSEHLKPPPGNCGFEHSKPTTRDWALQFTQQ---TKKRPRRMKREDLNSMKYVELYLVADYLEFQKNRRDQDATKHKLIEIANYVDKFYRSLNIRIALVGLEVWTHGNMCEVSENPYSTLWSFLSWRRKLLAQK---YHDNAQLITGMSFHGTTIGLAPLMAMCSVYQSGGVNMDHSENAIGVAATMAHEMGHNFGMTHDSADC-CSASAADGGCIMAAATGHPFPKVFNGCNRRELDRYLQSGGGMCLSNMPDTRMLYGGRRCGNGYLEDGEE----CDCGEEEECNNPCCNASNCTLRPGAECAHGSCCHQCKLLAPGTLCRE-QARQCDLPEFCTGKSPHCPTNFYQMDGTPC 506

HSP 2 Score: 119.398 bits (298), Expect = 1.979e-97
Identity = 76/188 (40.43%), Postives = 95/188 (50.53%), Query Frame = 2

Query: 1559 NRFCKIQTTQCETLWGETGAKAENPCFN-ANVDGDGFGNCGTKENGDHIPCSETNKLCGKIQCDSKPGTSLPRFPKIGSNRAVKI-TTYYVGGRSFDCRVVKM----DYPKNLDDPTMTFDGTKCGDNSVCISNKCVNINSLPHRKTCEPGRCKNGGVCNSNGNCHCPNGWACPYCNVTGIGGSLDSG 2104
            N  C     QC+ LWG     A + CF   NV GD FGNCG   NG+H  C+  +  CGKIQC S     L        + AV I TT  + GR   CR   +    +   ++ DP +   GTKCG N +C   +C N  S    + C   +C   GVCN+N NCHC  GWA P+CN  G GGS+DSG
Sbjct:  515 NGMCLTYQEQCQQLWGPGARPAPDLCFEKVNVAGDTFGNCGKDMNGEHRKCNMRDAKCGKIQCQSSEARPL-------ESNAVPIDTTIIMNGRQIQCRGTHVYRGPEEEGDMLDPGLVMTGTKCGYNHICFEGQCRN-TSFFETEGCG-KKCNGHGVCNNNQNCHCLPGWAPPFCNTPGHGGSIDSG 693

The following BLAST results are available for this feature:

BLAST of TCONS_00023961 vs. Swiss-Prot (Human)

BLAST of TCONS_00023961 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ADA19	1.979e-97	36.24	Disintegrin and metalloproteinase domain-containin...	[more]

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TCONS_00023961 (transcript) - C. hemisphaerica