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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024073 ID=TCONS_00024073|Name=TCONS_00024073|organism=Clytia hemisphaerica|type=transcript|length=889bp
TTTCTTTCTCTTAATGGctaactttatttttaaaaagtagcaCCCGGAAA
ATTTTCATCTCCAGTTATCCGTCGATTTTCGACGTCTTTCGACGAATTCC
GACTATAAGCTATGAATTTTGCGCGGCAAAGGACTGGAACGGGTTTATAT
AAAACGGGGGTTTGACGTATATCAACGTGCTAATTTCTTAGAGTTTTTGC
CTTTTATGAATAACATTATTACAAGTTAAAATTTACACTAAATTCTTTAA
TCAATTATTGCCCTATATTTGTTGTGTAAGTATATTGTAAAGTTCAAATG
AAGCCATTCCAACTCAAGATGAACCCCCGTCTAGTATTCGATCTTGGCGC
CATTTTTGTGTAGAAATCTTTTGaacaaaactattttttgaatcGACTTT
CGACGACGAGAGAAGAAGACGGACGTTTCACCGTTTCACAAAGAAAAGAC
CTCGACAAAAGGTATTTATtattagttttatttttaatctggGCCACAGG
CTATTCTGTTTAAGTCAGGCTGgatcttttttgtttgttttcatatGCAA
AATTAAACGACAGTCTGCTGGCAAGCTCCTGCTTGTGCTTCTTGAGGAGA
GAGATGTTTTTgggttttgatgttttttctcTTGCTTTGCTGCTTGGTAG
TAATACAAAGTCTTCATGCTAGGCTTATAGAATATTCATTTAGTTTTAAA
TTGACTTTCTGGCTCTGGTCTTTTTGTGTggtttggtcttttttaacatt
agttcggatagataTTTTCATACAACACTATaccttaccgtcaactgctc
taacttgggactatctttaCGCAACAtgatgggacggccattccaccacc
attttaAACCGAACCTCCatagtcatttgatttgagttt Run BLAST on NCBI transcript from alignment at sc0000474:228336..229224+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024073 ID=TCONS_00024073|Name=TCONS_00024073|organism=Clytia hemisphaerica|type=transcript|length=889bp|location=Sequence derived from alignment at sc0000474:228336..229224+ (Clytia hemisphaerica)
TTTCTTTCTCTTAATGGctaactttatttttaaaaagtagcaCCCGGAAA
ATTTTCATCTCCAGTTATCCGTCGATTTTCGACGTCTTTCGACGAATTCC
GACTATAAGCTATGAATTTTGCGCGGCAAAGGACTGGAACGGGTTTATAT
AAAACGGGGGTTTGACGTATATCAACGTGCTAATTTCTTAGAGTTTTTGC
CTTTTATGAATAACATTATTACAAGTTAAAATTTACACTAAATTCTTTAA
TCAATTATTGCCCTATATTTGTTGTGTAAGTATATTGTAAAGTTCAAATG
AAGCCATTCCAACTCAAGATGAACCCCCGTCTAGTATTCGATCTTGGCGC
CATTTTTGTGTAGAAATCTTTTGaacaaaactattttttgaatcGACTTT
CGACGACGAGAGAAGAAGACGGACGTTTCACCGTTTCACAAAGAAAAGAC
CTCGACAAAAGGTATTTATtattagttttatttttaatctggGCCACAGG
CTATTCTGTTTAAGTCAGGCTGgatcttttttgtttgttttcatatGCAA
AATTAAACGACAGTCTGCTGGCAAGCTCCTGCTTGTGCTTCTTGAGGAGA
GAGATGTTTTTgggttttgatgttttttctcTTGCTTTGCTGCTTGGTAG
TAATACAAAGTCTTCATGCTAGGCTTATAGAATATTCATTTAGTTTTAAA
TTGACTTTCTGGCTCTGGTCTTTTTGTGTggtttggtcttttttaacatt
agttcggatagataTTTTCATACAACACTATaccttaccgtcaactgctc
taacttgggactatctttaCGCAACAtgatgggacggccattccaccacc
attttaAACCGAACCTCCatagtcatttgatttgagttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024073-exon-sc0000474-1491911889:228336..229224 | TCONS_00024073-exon-sc0000474-1491911889:228336..229224 | Clytia hemisphaerica | exon |
| TCONS_00024073-exon-sc0000474-1510915933:228336..229224 | TCONS_00024073-exon-sc0000474-1510915933:228336..229224 | Clytia hemisphaerica | exon |
| TCONS_00024073-exon-sc0000474-1575043694:228336..229224 | TCONS_00024073-exon-sc0000474-1575043694:228336..229224 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000474 | supercontig | sc0000474:228336..229224 + |
Blast
The following BLAST results are available for this feature:
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