TCONS_00024074 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024074
Unique NameTCONS_00024074
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2285

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024074 ID=TCONS_00024074|Name=TCONS_00024074|organism=Clytia hemisphaerica|type=transcript|length=2285bp
TTTCTTTCTCTTAATGGctaactttatttttaaaaagtagcaCCCGGAAA
ATTTTCATCTCCAGTTATCCGTCGATTTTCGACGTCTTTCGACGAATTCC
GACTATAAGCTATGAATTTTGCGCGGCAAAGGACTGGAACGGGTTTATAT
AAAACGGGGGTTTGACGTATATCAACGTGCTAATTTCTTAGAGTTTTTGC
CTTTTATGAATAACATTATTACAAGTTAAAATTTACACTAAATTCTTTAA
TCAATTATTGCCCTATATTTGTTGTGTAAGTATATTGTAAAGTTCAAATG
AAGCCATTCCAACTCAAGATGAACCCCCGTCTAGTATTCGATCTTGGCGC
CATTTTTGTGTAGAAATCTTTTGaacaaaactattttttgaatcGACTTT
CGACGACGAGAGAAGAAGACGGACGTTTCACCGTTTCACAAAGAAAAGAC
CTCGACAAAAGAGAGGTGATTTGGTTTTGGACATATTTTGCATCGGTTTG
CACAACAATTAGTACATTCTGTGGTTCTTGTGGCTTTTTCTTGATAATTT
GCATTTGAGATGTAATGGAAAAGAGGAGAAGAAATAATGAAAGGTTGAAA
CAATGGAGGGACAGAAGAAAGCATGTTAATACAGTTGCTACTCAGAATTG
TACTTCTAGTGATGAGAGTGAGAATGCGCCACAAAGCAATGTCCCAATGC
TGGTTGCTATTGAAAGTCCTTCAGACAATGACATTATGTTTTCTGATAAT
GATTCACATGGAGTTGGTTCAGGTGTTGATTATGGTGAAAATCTGATTGT
AGATGAACCTGTTGCCCTGTTAGCTCCTCGAAATAGTGAATCTAACACTT
CTGCTCAATCTGAAACTGACAATGATTGTTTAGATGATGAGATGGACTAC
GCTTTGTGTGAAAGATTGAAAACTTGGGCCTTGAATAATAATTGTACCAG
GGCCTGTGTTAATGAAATTTTGGGTATTGTTACAGAGCTCGGTGGTAATG
TTCCTAAAGATACAAGAACTTTGTTGAATACAAAAAGAGATGTGATCCAA
ACACCTATGGGGGTCGGACATTACATTTACATCGGAGTTAAAAACAGAAT
TTGTAAACTGCTATCATACCAAGATAATTTCCAACCAATTGCGCTATTTG
TCAATATTGATGGACTTCCCATTTATAAATCTAGTTCTGCGAACCTTTGG
CCTATTCTCATTCGTTTTCATCCGTTCAAACCGATTGCTGTCGCCTTCTT
TTGTGGAAAGTCGAAGCCGCCATTCAACCAATTTGTCCGAGATTTTGTAG
CTGAAGTCAAAGATTTGATTAGAAATGGTTTTTTCTTCAATGGTGTCCAT
CGCTCAGTGACCTTGTTCTGTCTCCCTTGTGATGCCCCTGCACGTTCAGG
ACTTAGAGGTACCATACAGCACACAGGATATTGGGCATGCGAGCGGTGTA
CAATAAGAGGTGACAGTATCAAGAATCGAATTGTTTATGATCGCTGGGAT
CCTGACGTTGATGCCCCAATCGAGGAACGAACTAATGAAGTTTTCCGCCA
AGATGGTTACAGTATACCAGATGATGATGGCAAGCGTCACCAACTTGACG
TTTCTGAATTTGTCGACTTGCCAATTGATATGATCAAGAATTTTCCTGTT
GATCCTATGCATTTAGTATACCTTGGTGTAACGAGACGTCTTCTATATTA
TCTCAAAGGCTCCTTTCGCAAAATTAAAGATGGAAAGTTGTCATCCGCTT
ACATGAAAGCAATTAATCAGACGTTGGACAATTTGAAATTACCATCTGAA
TTCGCAAGGCAGCCAAGAAGTATTTCCGATCTTGACAGATGGAAAGCAAC
ATAATTCAAATCGCTTTTGCTTTATACTGGCGTGGTTGTTTTCCGTCCTT
ATTTTTCAGCTGGAGCGTGGAAACACTATCATGTTTTTCTGTGGCAATTC
GGTTGCTGAGTGAAGAAAGTGACGGCATTCGTAATGCTAATGTTCCTACT
GCAGAAGGCTTACTGAAATATTTCGTTCAAAATTCGAGAAATTATTATGG
TGAAACATTTTGTGTTTTCAACGTCCACAATCTAGTTCATCTTGCAAGTG
ATGTATCATATTTTCAGCTGCCATTGATTGCTTTTTCTTGCTTCCCTTTT
GAAAATCATTTGCAAAAATTGAAGCGCCTTGTAAGAGGTAAATCGAATCC
ACTAGCTCAAATAGTAAAACGATCCGAAGAATTAGACGCAAGTTACTACA
TTGAAAAACCTTTAGAAGTCATTATTAAATCTGat
Run BLAST on NCBI

protein sequence of TCONS_00024074-protein

>TCONS_00024074-protein ID=TCONS_00024074-protein|Name=TCONS_00024074-protein|organism=Clytia hemisphaerica|type=polypeptide|length=429bp
MEKRRRNNERLKQWRDRRKHVNTVATQNCTSSDESENAPQSNVPMLVAIE
SPSDNDIMFSDNDSHGVGSGVDYGENLIVDEPVALLAPRNSESNTSAQSE
TDNDCLDDEMDYALCERLKTWALNNNCTRACVNEILGIVTELGGNVPKDT
RTLLNTKRDVIQTPMGVGHYIYIGVKNRICKLLSYQDNFQPIALFVNIDG
LPIYKSSSANLWPILIRFHPFKPIAVAFFCGKSKPPFNQFVRDFVAEVKD
LIRNGFFFNGVHRSVTLFCLPCDAPARSGLRGTIQHTGYWACERCTIRGD
SIKNRIVYDRWDPDVDAPIEERTNEVFRQDGYSIPDDDGKRHQLDVSEFV
DLPIDMIKNFPVDPMHLVYLGVTRRLLYYLKGSFRKIKDGKLSSAYMKAI
NQTLDNLKLPSEFARQPRSISDLDRWKAT
Run BLAST on NCBI

transcript from alignment at sc0000474:228336..235735+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024074 ID=TCONS_00024074|Name=TCONS_00024074|organism=Clytia hemisphaerica|type=transcript|length=7400bp|location=Sequence derived from alignment at sc0000474:228336..235735+ (Clytia hemisphaerica)
TTTCTTTCTCTTAATGGctaactttatttttaaaaagtagcaCCCGGAAA ATTTTCATCTCCAGTTATCCGTCGATTTTCGACGTCTTTCGACGAATTCC GACTATAAGCTATGAATTTTGCGCGGCAAAGGACTGGAACGGGTTTATAT AAAACGGGGGTTTGACGTATATCAACGTGCTAATTTCTTAGAGTTTTTGC CTTTTATGAATAACATTATTACAAGTTAAAATTTACACTAAATTCTTTAA TCAATTATTGCCCTATATTTGTTGTGTAAGTATATTGTAAAGTTCAAATG AAGCCATTCCAACTCAAGATGAACCCCCGTCTAGTATTCGATCTTGGCGC CATTTTTGTGTAGAAATCTTTTGaacaaaactattttttgaatcGACTTT CGACGACGAGAGAAGAAGACGGACGTTTCACCGTTTCACAAAGAAAAGAC CTCGACAAAAGGTATTTATtattagttttatttttaatctggGCCACAGG CTATTCTGTTTAAGTCAGGCTGgatcttttttgtttgttttcatatGCAA AATTAAACGACAGTCTGCTGGCAAGCTCCTGCTTGTGCTTCTTGAGGAGA GAGATGTTTTTgggttttgatgttttttctcTTGCTTTGCTGCTTGGTAG TAATACAAAGTCTTCATGCTAGGCTTATAGAATATTCATTTAGTTTTAAA TTGACTTTCTGGCTCTGGTCTTTTTGTGTggtttggtcttttttaacatt agttcggatagataTTTTCATACAACACTATaccttaccgtcaactgctc taacttgggactatctttaCGCAACAtgatgggacggccattccaccacc attttaAACCGAACCTCCatagtcatttgatttgagtttaatgttAATGA ACTGCGTATAGACCCCTTTCATGTGATGTCATATGTTTTGGACTACCTTG TTTATAgcctaaataaaatatatattacaAATTTGGATGATAGAGGCAAT ATGCCTCGAACTTTGCCTCCGAATTCTGTCTCTTTTATTccagattttgt taaaaaagaccataCAGAAAAGAAGACTATAAGcgagaaaatcaaaactg aaaaattatgaaGAAAGGGGTCTATTAAAaaaacacgatttctctttcaa ttttacagtaagtgaaaatgcagaccagatatcaacaagtcccatgttaa GTACACTTGTCCCAAGTTGGAGCTGACGGTACCTCACAACACAATGACTG CTTATTGTTTTGTCTGATGCAGAAAATTATCTTTTTCGGACACCAAATAA ATGTGTTTGGTGTTGGTATTAACAGATTAATATACTGTATATAGTCCTGC CTGGGGGCATTCATCATACTGTGAACTGTgaaggtaacttgcatcagtgg agagaaacttgcatagccatcaaatgactgaccaatcaaagcagcaaaat ttcaaaacaaatgaactacacagCCCCGCCTGCTCAAATCTCTACTCTAG gattttaattttgtattttaatgaccagccagatcactcatttgagggct atgcatgttagcctccactgatgaaagctacccgatctcacggtagtacA TGTACTAAGACCTAATTAATCGAACCCATTAAAAACTGTACTTTTAATGG GACTTTGTTGTACTTAATCGAACTCTGTTGTCCAATTATTGTCCATTCAG TCGTTGAACTGTTatcaaatactcacaaatttttcaaaaaaaaaagttcg attaagcaAGTTCACCTAAAGAAAATTGCTAGGTTGTCTTAAACTTTTCT TGTTGTCGAACGGAGTATGTTTATAATgtcaaacttaatttttttttatc ttaaaattgAATAACGTGCAGTATCATGAGttgtcctaaatccgacagcc ctgccttaATCTGATAggatctttcaaagatacaaactaaaattgaatga agataccaaaatgtcaactaaactgagagatttggtacactgaaccaatt gaaccaaataacaataatttttcttataacataattttttcaattagTTC GGTGTAATCAAACTGTTTGATTAATTACGTTAGGATGTATTCACACAGTG ATTGAACAGGGTCCAGcgttaaaaaatattattttcaaacacCAGATATT GCAGAACTGCTAAAATATggtatggaaaacttttgtcgtaaaatcagaaa ttttttcatttttccattgTCTATcaggaatttttttcaacatcaattca attttatttaaaaaatttattatcTTTCGACACTTGAAAGTTTTCATCAA TATGGTTTAAAAGGTGGAAAAAATCCATCATCAAACCTGAAAGTTTTCTC CCTACTGTGTTTATATAACTATCAACTTTGAATTCCACACGTTTTTGAAA CATTTATCAGCaaattggaaattttcttcTATGTGTACCCAAAATGTGGA AATTTGTTGTgaacttaaaaagttttttttgtgcttTCTGATTGTGGACA AACTCTAGTATTAACTCTGAAGTTTTCCTTAATGTGATTTCATAGTGTAA TTTCCTGCAAAGACTTAGGAAAGAAAGACGTCACAGCgcataattatgca aaattatctcTTTGTTGggacaaaagaattttttccctTTGATCTAACGT TAGTTTTCaacaagattaaaaaaaatggcaTGGATGGCAATCGAAGGCCA CCAAATTTGGAACCACTCGTCCATGTAATTTTTCTAATTATCATGAAATA TGTCAATAAATTGGATTGGTTGTCTTATAGAATAATTATTCTTTCCATTT CTGCTCTTTGAACCTTAAACTTTGGCcagaaggaagaaattttgcaaaaa caaGATTGCTGGATGTTTTCTGCGTATTTACTATAATGACCAAAAGAATG GCTTTGAAATACTATGTTAGAGGATTTTTTTacgattaaaaataattttc cagcATTTTAATAGGACCAAACTTTAAGTCTATACCATTCTTTTTTGTGG CCTGGCTCTTTTCAGACTGGCCTGGTTTAATGTTTTTGTGCTACAGTATA TTTTGTGAACTGTCAGACTGTGTTTTGTTGGAAATTAAGGTTTTCTGTTA GTTTACCTGGCTTTATGTTTGTTCAGATGAAAAGTATTTGATTTTAATGT CACTCATGAATTCAGTTGATTTCAATATacctttttaatttatttagaTG TATAAAATATATACCTATATgtataaaaatacatcaaaataaTCAGTAAC CATATTCTGTATCCTGCTCCTTGAAAAGGCATTTCAAAAACAGATGGGTA ACTTCAAATCAAGGATAACTTCTCTTATAACATATCTTCAACAGACAAGA TGTAATGTGATCAGAATTGAAATATGTATATCTAACACCCAATCAATTTT TTGGATATCTTGATATATGTGGCTTGGCTGGGAGACTTAGTCGATTAGAA TTATCAATAGCGATGATGAAAAGATATTtggaatatcttaaaatttagaT AATAACGTATTGTTTACACTGTCACTAGAGACGGAGCTCACAGCAGGCTA GAAACTGAAATTGTGAGGGTTATATTGCATCAGTATTTATATGGAAATAT TTGGTACCCCAACAGTAAAATTGTGATATTTGTAGAAAGNGGGGTTATAT TGCATTAGTATTTATATGGAAATATTTGGTACCCCAACAGTAAAATTGTG ATATTTGTAGAAAGTGGACTAAAATATACAACAATTGATTATGCCTGGGT CATTGGCTAAATAAGCGCCATCTGCCATCTCATGGACAGAATCTgagatt tacaaaaataatgtaCGTTCAATTGGCTAAAAATTGGAAAGAGTATTGAA AGCTTAGATATGACTTTTAAAATAGTGTGCCAGATTTTTAATTCGGTAAG ACTGGTTTCTGGCAAATGAGAAAACTATTGCTTACAGTACTGTAGATAAT CTTGAACAAATTAAATACATTCCTTGGCTAGGTAATTCTAACAAATTATG GAAAGTAGACTTTATTCTAAATTAATCAGTTAGTCatcataatgaaatta attttgaggGGTTATATTGGCAGAGTTCTTAATATTGTGAAATGCTCGGA CTGTTAAtactaaaattatttgtttgtgtaaatattttaatgtagcataa gggactttttgtctattttttgtcATCTAAGTATCATTTTCAATCGTCAA TTAATCCTCAGAAAAAATTGAACCTAGGTCATCTAACTATTTTCAAAGAA TTGCCTATTTTTGTCTATtatggaaaattgttttttgttttgtttctcaG TATTACCAAACAATAAAGTGATGATTTgatcttgtattttttaattatat tgTGTTATGCCAGTTAACTAGGGTCCTGGTTAAAGATATATGTTACATGC ATGAGTTACTTTGTTCATTTGTGTCCAGACATTTTTTTAATCTCGAGACT GGTAGTTGTAAACAAAAACCACAAGTTATATTAAATTGTGATTTTGTTCT TGATTGgaaatggttgaaaaattctgaaaatgttcaaatacttattttct gaaaagaaagtgaaacctatcatttttcattaaatttttcatagcATGTT TTCTTATAATGAGCACCAATTGCACTATTTAAAAGTACTGTTCAGCATAT CCTGTTTGTGATGTTagctttttattataattttgtttttcacttcactt ttaaaaatgctCTCTGCTGTCTTTCCCATGGCCATAATTGGTTTGGTTAA CTTAACCTTTTTATAATATaccaaaatgccaaaaatactAGTTCTCATAA GGGTTTTTACNTTTATAATATaccaaaatgccaaaaatactAGTTCTCAT AAGGGTTTTTACCCAAAAAGTATAAATGTAATACTGTAATAATAAACTTT TTCTCAACAGAGAGGTGATTTGGTTTTGGACATATTTTGCATCGGTTTGC ACAACAATTAGTACATGTAAGTTATATTTGTAATCATACATTTAAACAAG ATTTGTTTTGTCAAGTAATTAAAGAAAGAATAAAAGACTTTGAATGAATT TTACATAACAATTTCcatgtttgataaaaaaattcattgatgATATTGTG TTTAAATAAAAGTTTCAagcttttttcatcttcattcgcttttgaaaggt tttttcttgtttttcaagTAGAGGACTTTTGACAGTATTTTGGTCTTCAA GAATGCTTTCTTGATAAGAAGGGATTTCCAGCACAAGTCTAACGTCGGTT AAGTTTGTTCTCTTTTTTGTGTCAATTGTGTCAATCAGTGTGTAAATTAG TATCTGAAAGGACCTGGTCAATTTCCTCATATTCTGCTAAACTTAATTCT TCTGCTGGCTACCATTTAGCTTGTATTGCAGTCGAGattcaaacaaaaaa tatttgtttcttgCATTTTCAGTCTGTGGTTCTTGTGGCTTTTTCTTGAT AATTTGCATTTGAGATGTAATGGAAAAGAGGAGAAGAAATAATGAAAGGT GAATAAAATGCTTGATCCACTCTGTCTTTGTCACTGTCTTCTTTTTGAGT ATTTTCTTTTGGTTTaatactaaaaatatttttatcactCCATTGTCCTA TGCTGGATCAAAATGTATAGCATACTGGAGAAAAGCTATCTCTTCCCTTA TTGCTCCAATGAATACAGGCATCTAATTAAAAGACTTCTTTTCATTTTGA AATTTAAGGTTGAAACAATGGAGGGACAGAAGAAAGCATGTTAATACAGT TGCTACTCAGAATTGTACTTCTAGTGATGAGAGTGAGAATGCGCCACAAA GCAATGTCCCAATGCTGGTTGCTATTGAAAGTCCTTCAGACAATGACATT ATGTTTTCTGATAATGATTCACATGGAGTTGGTTCAGGTGTTGATTATGG TGAAAATCTGATTGTAGATGAACCTGTTGCCCTGTTAGCTCCTCGAAATA GTGAATCTAACACTTCTGCTCAATCTGAAACTGACAATGATTGTTTAGAT GATGAGATGGACTACGCTTTGTGTGAAAGATTGAAAACTTGGGCCTTGAA TAATAATTGTACCAGGGCCTGTGTTAATGAAATTTTGGGTATTGTTACAG AGCTCGGTGGTAATGTTCCTAAAGATACAAGAACTTTGTTGAATACAAAA AGAGATGTGATCCAAACACCTATGGGGGTCGGACATTACATTTACATCGG AGTTAAAAACAGAATTTGTAAACTGCTATCATACCAAGATAATTTCCAAC CAATTGCGCTATTTGTCAATATTGATGGACTTCCCATTTATAAATCTAGT TCTGCGAACCTTTGGCCTATTCTCATTCGTTTTCATCCGTTCAAACCGAT TGCTGTCGCCTTCTTTTGTGGAAAGTCGAAGCCGCCATTCAACCAATTTG TCCGAGATTTTGTAGCTGAAGTCAAAGATTTGATTAGAAATGGTTTTTTC TTCAATGGTGTCCATCGCTCAGTGACCTTGTTCTGTCTCCCTTGTGATGC CCCTGCACGTTCAGGACTTAGAGGTACCATACAGCACACAGGATATTGGG CATGCGAGCGGTGTACAATAAGAGGTGACAGTATCAAGAATCGAATTGTT TATGATCGCTGGGATCCTGACGTTGATGCCCCAATCGAGGAACGAACTAA TGAAGTTTTCCGCCAAGATGGTTACAGTATACCAGATGATGATGGCAAGC GTCACCAACTTGACGTTTCTGAATTTGTCGACTTGCCAATTGATATGATC AAGAATTTTCCTGTTGATCCTATGCATTTAGTATACCTTGGTGTAACGAG ACGTCTTCTATATTATCTCAAAGGCTCCTTTCGCAAAATTAAAGATGGAA AGTTGTCATCCGCTTACATGAAAGCAATTAATCAGACGTTGGACAATTTG AAATTACCATCTGAATTCGCAAGGCAGCCAAGAAGTATTTCCGATCTTGA CAGATGGAAAGCAACATAATTCAAATCGCTTTTGCTTTATACTGGCGTGG TTGTTTTCCGTCCTTATTTTTCAGCTGGAGCGTGGAAACACTATCATGTT TTTCTGTGGCAATTCGGTTGCTGAGTGAAGAAAGTGACGGCATTCGTAAT GCTAATGTTCCTACTGCAGAAGGCTTACTGAAATATTTCGTTCAAAATTC GAGAAATTATTATGGTGAAACATTTTGTGTTTTCAACGTCCACAATCTAG TTCATCTTGCAAGTGATGTATCATATTTTCAGCTGCCATTGATTGCTTTT TCTTGCTTCCCTTTTGAAAATCATTTGCAAAAATTGAAGCGCCTTGTAAG AGGTAAATCGAATCCACTAGCTCAAATAGTAAAACGATCCGAAGAATTAG ACGCAAGTTACTACATTGAAAAACCTTTAGAAGTCATTATTAAATCTGat

Coding sequence (CDS) from alignment at sc0000474:228336..235735+

>TCONS_00024074 ID=TCONS_00024074|Name=TCONS_00024074|organism=Clytia hemisphaerica|type=CDS|length=2580bp|location=Sequence derived from alignment at sc0000474:228336..235735+ (Clytia hemisphaerica)
ATGGAAAAGAGGAGAAGAAATAATGAAAGGTTGAAACAATGGAGGGACAG
AAGAAAGCATGTTAATACAGTTGCTACTCAGAATTGTACTTCTAGTGATG
AGAGTGAGAATGCGCCACAAAGCAATGTCCCAATGCTGGTTGCTATTGAA
AGTCCTTCAGACAATGACATTATGTTTTCTGATAATGATTCACATGGAGT
TGGTTCAGGTGTTGATTATGGTGAAAATCTGATTGTAGATGAACCTGTTG
CCCTGTTAGCTCCTCGAAATAGTGAATCTAACACTTCTGCTCAATCTGAA
ACTGACAATGATTGTTTAGATGATGAGATGGACTACGCTTTGTGTGAAAG
ATTGAAAACTTGGGCCTTGAATAATAATTGTACCAGGGCCTGTGTTAATG
AAATTTTGGGTATTGTTACAGAGCTCGGTGGTAATGTTCCTAAAGATACA
AGAACTTTGTTGAATACAAAAAGAGATGTGATCCAAACACCTATGGGGGT
CGGACATTACATTTACATCGGAGTTAAAAACAGAATTTGTAAACTGCTAT
CATACCAAGATAATTTCCAACCAATTGCGCTATTTGTCAATATTGATGGA
CTTCCCATTTATAAATCTAGTTCTGCGAACCTTTGGCCTATTCTCATTCG
TTTTCATCCGTTCAAACCGATTGCTGTCGCCTTCTTTTGTGGAAAGTCGA
AGCCGCCATTCAACCAATTTGTCCGAGATTTTGTAGCTGAAGTCAAAGAT
TTGATTAGAAATGGTTTTTTCTTCAATGGTGTCCATCGCTCAGTGACCTT
GTTCTGTCTCCCTTGTGATGCCCCTGCACGTTCAGGACTTAGAGGTACCA
TACAGCACACAGGATATTGGGCATGCGAGCGGTGTACAATAAGAGGTGAC
AGTATCAAGAATCGAATTGTTTATGATCGCTGGGATCCTGACGTTGATGC
CCCAATCGAGGAACGAACTAATGAAGTTTTCCGCCAAGATGGTTACAGTA
TACCAGATGATGATGGCAAGCGTCACCAACTTGACGTTTCTGAATTTGTC
GACTTGCCAATTGATATGATCAAGAATTTTCCTGTTGATCCTATGCATTT
AGTATACCTTGGTGTAACGAGACGTCTTCTATATTATCTCAAAGGCTCCT
TTCGCAAAATTAAAGATGGAAAGTTGTCATCCGCTTACATGAAAGCAATT
AATCAGACGTTGGACAATTTGAAATTACCATCTGAATTCGCAAGGCAGCC
AAGAAGTATTTCCGATCTTGACAGATGGAAAGCAACATAAATGGAAAAGA
GGAGAAGAAATAATGAAAGGTTGAAACAATGGAGGGACAGAAGAAAGCAT
GTTAATACAGTTGCTACTCAGAATTGTACTTCTAGTGATGAGAGTGAGAA
TGCGCCACAAAGCAATGTCCCAATGCTGGTTGCTATTGAAAGTCCTTCAG
ACAATGACATTATGTTTTCTGATAATGATTCACATGGAGTTGGTTCAGGT
GTTGATTATGGTGAAAATCTGATTGTAGATGAACCTGTTGCCCTGTTAGC
TCCTCGAAATAGTGAATCTAACACTTCTGCTCAATCTGAAACTGACAATG
ATTGTTTAGATGATGAGATGGACTACGCTTTGTGTGAAAGATTGAAAACT
TGGGCCTTGAATAATAATTGTACCAGGGCCTGTGTTAATGAAATTTTGGG
TATTGTTACAGAGCTCGGTGGTAATGTTCCTAAAGATACAAGAACTTTGT
TGAATACAAAAAGAGATGTGATCCAAACACCTATGGGGGTCGGACATTAC
ATTTACATCGGAGTTAAAAACAGAATTTGTAAACTGCTATCATACCAAGA
TAATTTCCAACCAATTGCGCTATTTGTCAATATTGATGGACTTCCCATTT
ATAAATCTAGTTCTGCGAACCTTTGGCCTATTCTCATTCGTTTTCATCCG
TTCAAACCGATTGCTGTCGCCTTCTTTTGTGGAAAGTCGAAGCCGCCATT
CAACCAATTTGTCCGAGATTTTGTAGCTGAAGTCAAAGATTTGATTAGAA
ATGGTTTTTTCTTCAATGGTGTCCATCGCTCAGTGACCTTGTTCTGTCTC
CCTTGTGATGCCCCTGCACGTTCAGGACTTAGAGGTACCATACAGCACAC
AGGATATTGGGCATGCGAGCGGTGTACAATAAGAGGTGACAGTATCAAGA
ATCGAATTGTTTATGATCGCTGGGATCCTGACGTTGATGCCCCAATCGAG
GAACGAACTAATGAAGTTTTCCGCCAAGATGGTTACAGTATACCAGATGA
TGATGGCAAGCGTCACCAACTTGACGTTTCTGAATTTGTCGACTTGCCAA
TTGATATGATCAAGAATTTTCCTGTTGATCCTATGCATTTAGTATACCTT
GGTGTAACGAGACGTCTTCTATATTATCTCAAAGGCTCCTTTCGCAAAAT
TAAAGATGGAAAGTTGTCATCCGCTTACATGAAAGCAATTAATCAGACGT
TGGACAATTTGAAATTACCATCTGAATTCGCAAGGCAGCCAAGAAGTATT
TCCGATCTTGACAGATGGAAAGCAACATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013523XLOC_013523Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024074-proteinTCONS_00024074-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024074-exon-sc0000474-1491911889:228336..228796TCONS_00024074-exon-sc0000474-1491911889:228336..228796Clytia hemisphaericaexon
TCONS_00024074-exon-sc0000474-1510915933:228336..228796TCONS_00024074-exon-sc0000474-1510915933:228336..228796Clytia hemisphaericaexon
TCONS_00024074-exon-sc0000474-1575043694:228336..228796TCONS_00024074-exon-sc0000474-1575043694:228336..228796Clytia hemisphaericaexon
TCONS_00024074-exon-sc0000474-1491911889:233246..233301TCONS_00024074-exon-sc0000474-1491911889:233246..233301Clytia hemisphaericaexon
TCONS_00024074-exon-sc0000474-1510915933:233246..233301TCONS_00024074-exon-sc0000474-1510915933:233246..233301Clytia hemisphaericaexon
TCONS_00024074-exon-sc0000474-1575043694:233246..233301TCONS_00024074-exon-sc0000474-1575043694:233246..233301Clytia hemisphaericaexon
TCONS_00024074-exon-sc0000474-1491911889:233758..233833TCONS_00024074-exon-sc0000474-1491911889:233758..233833Clytia hemisphaericaexon
TCONS_00024074-exon-sc0000474-1510915933:233758..233833TCONS_00024074-exon-sc0000474-1510915933:233758..233833Clytia hemisphaericaexon
TCONS_00024074-exon-sc0000474-1575043694:233758..233833TCONS_00024074-exon-sc0000474-1575043694:233758..233833Clytia hemisphaericaexon
TCONS_00024074-exon-sc0000474-1491911889:234044..235735TCONS_00024074-exon-sc0000474-1491911889:234044..235735Clytia hemisphaericaexon
TCONS_00024074-exon-sc0000474-1510915933:234044..235735TCONS_00024074-exon-sc0000474-1510915933:234044..235735Clytia hemisphaericaexon
TCONS_00024074-exon-sc0000474-1575043694:234044..235735TCONS_00024074-exon-sc0000474-1575043694:234044..235735Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000474supercontigsc0000474:228336..235735 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.141248 0 0 0 1.13431 0.585911 0.594995 0.699496 0.174888 0.262935 0.346278 0.085352 0.373293 0.126884 0.198734 0 0.197883 0.0920148 0 0.327562 0.375079 0 0.156979 0.133208 0 0.165867 0.133369 0 0.297601 0.270555
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00024074 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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