|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024110 ID=TCONS_00024110|Name=TCONS_00024110|organism=Clytia hemisphaerica|type=transcript|length=930bp
TCAGATTGTATCTAAACCAAAACATTTTACGGTTGTATTCGCTCAGTGTA
ACACAAAGTTGAAGGTTCGCAATGGACTTACGTCACATGAgctcagtgga
tcggtgagacgggtTTGAGGTCATTAAGTTGGCTCTCAGTTGCAGCTCCG
CTGTTGTGACAAAAGTaccgggattctcaaagtagtACAAGTACATAACA
GAGCTATAGAGCCAATGCTCACAAAATGATCAAATGCATTTAACAATTTA
TTAAACGTAATTCAAAGTTGGGTAATTCAGATTTCCAGGCCTGGGAAACT
TGGAAAACCAGGCCTGAGAAATCGTCATTTTACACCCTGAAATTCGTAAA
ACCCTAAGCCAGAGAAATCGTCATTTTACAACCCGAAATTTGGAAaaccc
aggcctgggaaatgGCCATTTCCAAGGCCTgggattttaaggttttttcc
tGTGAGACATGATCAAAATGATTGCCTTGATGTCGACAGAGCATGAGATG
AATGGAATAaaattacaaatagaataatagaatgaaattttgtaaaataa
aaagcaaaaccCTATTCCACCAAAAGGGGTCTTTTACCATATGTATATGA
tagtatgtaatagtttatttcaagttcatgaacaggtagcaacaaaggct
aataaaagtcaacggtACTTTccaatttgtaaggtgattacaaaaagcCG
ACACCGTCAATGAAGGTCCGGCACGGGCATGATGTAGGCCTCCACTGCTT
Aaatcttttccttaaaaatactaagatcaactacacgcttttttttataa
gaatagtgtactttggatgagagtCAAGTATTCTTaggaaattgccaaaa
ttgagggtgaaatattcttaacgtattcttacttttttagacttgacttt
tttacaaacatgagaaataatCAATTTGAG Run BLAST on NCBI transcript from alignment at sc0000474:220043..220972 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024110 ID=TCONS_00024110|Name=TCONS_00024110|organism=Clytia hemisphaerica|type=transcript|length=930bp|location=Sequence derived from alignment at sc0000474:220043..220972 (Clytia hemisphaerica)
CTCAAATTGattatttctcatgtttgtaaaaaagtcaagtctaaaaaagt
aagaatacgttaagaatatttcaccctcaattttggcaatttcctAAGAA
TACTTGactctcatccaaagtacactattcttataaaaaaaagcgtgtag
ttgatcttagtatttttaaggaaaagattTAAGCAGTGGAGGCCTACATC
ATGCCCGTGCCGGACCTTCATTGACGGTGTCGgctttttgtaatcacctt
acaaattggAAAGTaccgttgacttttattagcctttgttgctacctgtt
catgaacttgaaataaactattacatactaTCATATACATATGGTAAAAG
ACCCCTTTTGGTGGAATAGggttttgctttttattttacaaaatttcatt
ctattattctatttgtaatttTATTCCATTCATCTCATGCTCTGTCGACA
TCAAGGCAATCATTTTGATCATGTCTCACaggaaaaaaccttaaaatccc
AGGCCTTGGAAATGGCcatttcccaggcctgggttTTCCAAATTTCGGGT
TGTAAAATGACGATTTCTCTGGCTTAGGGTTTTACGAATTTCAGGGTGTA
AAATGACGATTTCTCAGGCCTGGTTTTCCAAGTTTCCCAGGCCTGGAAAT
CTGAATTACCCAACTTTGAATTACGTTTAATAAATTGTTAAATGCATTTG
ATCATTTTGTGAGCATTGGCTCTATAGCTCTGTTATGTACTTGTactact
ttgagaatcccggtACTTTTGTCACAACAGCGGAGCTGCAACTGAGAGCC
AACTTAATGACCTCAAacccgtctcaccgatccactgagcTCATGTGACG
TAAGTCCATTGCGAACCTTCAACTTTGTGTTACACTGAGCGAATACAACC
GTAAAATGTTTTGGTTTAGATACAATCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024110-exon-sc0000474-1491911889:220043..220972 | TCONS_00024110-exon-sc0000474-1491911889:220043..220972 | Clytia hemisphaerica | exon |
| TCONS_00024110-exon-sc0000474-1510915933:220043..220972 | TCONS_00024110-exon-sc0000474-1510915933:220043..220972 | Clytia hemisphaerica | exon |
| TCONS_00024110-exon-sc0000474-1575043694:220043..220972 | TCONS_00024110-exon-sc0000474-1575043694:220043..220972 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000474 | supercontig | sc0000474:220043..220972 . |
Blast
The following BLAST results are available for this feature:
|
