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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024111 ID=TCONS_00024111|Name=TCONS_00024111|organism=Clytia hemisphaerica|type=transcript|length=1019bp
caaaatgataaaaaatgaaagaaaaaacatactggatttattttagcgaa
tcagtttttcgaaaaatttcgcgcggataaattttggcgATCTGTCAATT
CGGCgcgttttagcgagatttattttagcgaaaatagggaaaactcgcta
aaacgctaaaattagtctcgttAAAATTTCNTCGGCgcgttttagcgaga
tttattttagcgaaaatagggaaaactcgctaaaacgctaaaattagtct
cgctaaaatttatacGATTAATATGCAcagaaaaagatattcaaatccCC
ACATTTGCAAAAATCAAATTAGCGTATCGTATTTCATAATCCTCAATTCG
TTTTTGGATaacttacaagctaaaaattgaaaattgaccctACAAGATGC
AAAAACCATGCTTGCCCTAATTTTGATGCATGATTTGTTTTGGCGTAGGG
TAAAAATTGGAGATGCAATTTCTTTATGACCTTGTTGGCGCACTGAATCA
CAGTCCGTCTGTCTACAGTCAGGAGTTTTGCCTGCTAGTCGTTTAGGAGA
ATGCGACAGGGCCTGAAATAACCGTCAGACATCAGACATTCTTCAACCCG
ATCAATGAAATGTCCGACCAAAATAGATTCTGATCGGACATTATGTCAGA
CTCATATTTTTAGTCTACCCGATGGTATCAATCATTTGTAttcaatttga
ttttgaaaaatcgtcaatttttgcttattttgggGGTTGGGAGTTTTGCC
TACAACGTCAGCTTTTAggccataaaaacttttgccaggCCTAATTCGAG
GGGCCcatctcaaaaaagtttcaaaattctaTCTACTTTTGAGCTAACTG
CATGCTGTTGAGTCCCATGAAAGATGCTGCGGATCGTAAGGATTGGCCAC
TAATATTTTAGTTTCTAACGGACGCTGCCCTGCTTTTTAAAATATGTCCC
CTGTAATGTATCACCGTGCGTAATTTATTAATACCGGATAAAACCATCAG
ACAGTCGGGTACGTCGGTA Run BLAST on NCBI transcript from alignment at sc0000474:221169..222187 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024111 ID=TCONS_00024111|Name=TCONS_00024111|organism=Clytia hemisphaerica|type=transcript|length=1019bp|location=Sequence derived from alignment at sc0000474:221169..222187 (Clytia hemisphaerica)
TACCGACGTACCCGACTGTCTGATGGTTTTATCCGGTATTAATAAATTAC
GCACGGTGATACATTACAGGGGACATATTTTAAAAAGCAGGGCAGCGTCC
GTTAGAAACTAAAATATTAGTGGCCAATCCTTACGATCCGCAGCATCTTT
CATGGGACTCAACAGCATGCAGTTAGCTCAAAAGTAGAtagaattttgaa
acttttttgagatgGGCCCCTCGAATTAGGcctggcaaaagtttttatgg
ccTAAAAGCTGACGTTGTAGGCAAAACTCCCAACCcccaaaataagcaaa
aattgacgatttttcaaaatcaaattgaaTACAAATGATTGATACCATCG
GGTAGACTAAAAATATGAGTCTGACATAATGTCCGATCAGAATCTATTTT
GGTCGGACATTTCATTGATCGGGTTGAAGAATGTCTGATGTCTGACGGTT
ATTTCAGGCCCTGTCGCATTCTCCTAAACGACTAGCAGGCAAAACTCCTG
ACTGTAGACAGACGGACTGTGATTCAGTGCGCCAACAAGGTCATAAAGAA
ATTGCATCTCCAATTTTTACCCTACGCCAAAACAAATCATGCATCAAAAT
TAGGGCAAGCATGGTTTTTGCATCTTGTagggtcaattttcaatttttag
cttgtaagttATCCAAAAACGAATTGAGGATTATGAAATACGATACGCTA
ATTTGATTTTTGCAAATGTGGggatttgaatatctttttctgTGCATATT
AATCgtataaattttagcgagactaattttagcgttttagcgagttttcc
ctattttcgctaaaataaatctcgctaaaacgcGCCGANGAAATTTTaac
gagactaattttagcgttttagcgagttttccctattttcgctaaaataa
atctcgctaaaacgcGCCGAATTGACAGATcgccaaaatttatccgcgcg
aaatttttcgaaaaactgattcgctaaaataaatccagtatgttttttct
ttcattttttatcattttg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024111-exon-sc0000474-1491911889:221169..222187 | TCONS_00024111-exon-sc0000474-1491911889:221169..222187 | Clytia hemisphaerica | exon |
| TCONS_00024111-exon-sc0000474-1510915933:221169..222187 | TCONS_00024111-exon-sc0000474-1510915933:221169..222187 | Clytia hemisphaerica | exon |
| TCONS_00024111-exon-sc0000474-1575043694:221169..222187 | TCONS_00024111-exon-sc0000474-1575043694:221169..222187 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000474 | supercontig | sc0000474:221169..222187 . |
Blast
The following BLAST results are available for this feature:
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