TCONS_00024203 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024203
Unique NameTCONS_00024203
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length624

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024203 ID=TCONS_00024203|Name=TCONS_00024203|organism=Clytia hemisphaerica|type=transcript|length=624bp
TGNATCAAGAAGACTGGTGACAACTGGAGCTTGAATGGTTTAGTCATGAA
TAAGCTCGAACATCAATTATCAAAAGATCCGAAGGTTCGATGCAGTAATT
GGGAGAATGTACCTTTATCGAAAGAACAACTTGATTACGCTGTCCTTGAT
GCTTATGCTGGATGGAAAGTTTATCACAAATTACTTGAATGACATTGACG
ATCAGATGTGGTTCAAATTATGTTGTATTGCTTTGATGGTTGCAATCGCG
ACAGCCAAGGATGAATTTCGCGGTGATGATCTGAGAAAACGTGAAAAACG
AGCTGTTCGGAATTTTGGTTTGTGTAACCGTGTCCAGACCTATGGCCCTT
CTCCAATCCGCAATTGTATCAAGGCAAAACGAATGGATTTAGTCAAGGTG
AAATGTCAGTTTACATTCAAATCACCAATCTCTGGTTCAGTAACAGTTGT
TTGTGAACGGAAGCCAAAAGTTGGTTGGTCTTGCCCTATATCATCAAATG
TCGCCATATTGAAGTGCTGTGATATATTCTGTGATTTGTGAAATAAAATC
ATAATTACTTTGAAATAATATCTCCAAATAATAAAAATTGTCAGTTTAAT
GTTTTCTCCCCTAAAGCGGTGCCC
Run BLAST on NCBI

transcript from alignment at sc0000478:163105..180743-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024203 ID=TCONS_00024203|Name=TCONS_00024203|organism=Clytia hemisphaerica|type=transcript|length=17639bp|location=Sequence derived from alignment at sc0000478:163105..180743- (Clytia hemisphaerica)
TGNATCAAGAAGACTGGTGACAACTGGAGCTTGAATGGTTTAGTCATGAA
TAAGGTATGGTCGAGTTAAATTGTTGATAATCACCCTAAGGGGACGGGTG
AAAAATACTACTACTTATTACCCGCGTCCTACTTATGCGAATATTTTCTT
TTTGCCTGAAAAGATAAAAAAGTTCAAGGGAGCGAAGAAAAATGTACCTA
TCCAGTTTCAACTATGGATTCAGGTACTGCTATGCTTGACTTAATGTATA
TGATGAGTTTGTTTGTAATCATATTCACCTAGTACTTCTGTTAATCGTTA
GTCTTCACCAATTTTAATCTTTTGTCAAGCAATAATAGCGAGTCAATGCA
CTATTGAGGCCGGTGAAGTGACTGAATCTATTTGGAATAACCCGCATATT
TGACCCGCAAAATCAAGGACGGTAAAAGTGCTTTTGTACCGTTGTCGCTA
GTCAATCAAAATCTAGACAAATCAGAAACTAACCGACCTCTTCGCTGGAA
AAAAAAACAGATACATAAACTTGATAATATTATAAGTTACGCGGGTCTTC
AAGGCGGTATATGATATGGGGTTATTGAGATTTATTGAAGAAAATGCTTG
TCGAGATAGAATTTCCTGGAATTTGCACTTAGACTTAGACGCCTTTTAAG
AAAAATGCTTCTGAACAATGCTGAATTATATTAAAAAGTACTAACTAGAG
AAATTAGTATAAAGAATAGAGTTTATGTCAGGAATCGCCCCAGTCCTTAA
TCCCTTATTTCTTCTTGCAATCAGCTCGAACATCAATTATCAAAAGATCC
GAAGGTTCGATGCAGTAATTGGGAGAATGTACCTTTATCGAAAGAACAAC
TTGATTACGCTGTCCTTGATGCTTATGTATGATGATATTTTAAGAAAATT
GTACTTTTCACTCAGTTTGGTCAACGTGGGATAGATAGCTCCCCCCTGGG
CAAACACTAGATAAGCCCTATAACTATCAACCTATTCCATTATTTATTTT
TTTGATTCAAGGAATTATACTTGAAGAACAGCCGACAAAAGCTGTTGAAG
GTTATCAGTCCATGGGGAGAGGCATGTTATCGTTCGTATAATGGCCCCTC
ACATTTTTGCAAACTTTTTTATAAGTCAAAAACCTGTTTATCAAATTAAA
AAGCGTTTTACTTTGCTTAAAGGTGCACAATTGAAACAATTGTCTTTGTC
GACCAATCGTTTTTTAAAACTTTTTGGCCTCCTCACTTCAAACGGCTCGT
CGGGGCCCGTGCGTAGTCACGACAGATTCCTAATTGTGATTAATGATTGT
ATATTGATTGTTCCATTTATCCTGGTATCTTTAAAAAAATGCAATCCAAT
TTGATTTTTAGGCTGGATGGAAAGTTTATCACAAATTACTTGAATGACAT
TGACGATCAGGTATGTCATCATATTATTTTGAAAGTTCTGCATCGATGAT
AAAAAATATAGCTAGATAGGAAAGTATAATATGCAATGAGGGAATATTAT
CTTTTGTTTTCAGAATTTAATAGATCTAGTAAAATAATATTATAATATTT
GATTTTTTTAAAAGACAAGAGTATTAAAATTTTGAATGTAATTTTGACAC
TCTTTTTGGTTCACCAGAACAGCTGTCTATATCTTCCAATCAATCTAACA
AACCAGTGTAATTTCAAGAATGGCCAAATTATCTCATGCCACTTTATATC
GGCTTGTAAGCCGTGAACTTTTAATTCTATCTCCTTTACATACTTATCAA
TGATTTAAGGATTACTCCTTCACTTTTGAATACTAAAAAGATACTGTGAC
CAAGAATCTCGTCCCGCACCACGATTCCTAACTTGTGTATTACGGAGATA
ACCAGTCTCGTCTCTCTCTCTACGATTCCTGCTTTGTTTATTACGGAGAT
GGACAATCTCGTCTCTCTCTATGATTCCTGCTTTGTGTATTACGGAGATA
ACCAGTGACGCCCCTCCCAACGATTCCTGCTTTGTTTATTACGGAGATAG
ACAGTCTCGTCTCTCTCTATGATTCCTGCTTTGTATCTTACGGAGATAAC
CAGTCTCGCCCTTCTCTATGATTCCTGCTTTGTATCTTACGGAGATAACC
AGTCTCGCCCTTCTCTATGATTCCTGCTTTGTATCTTACAGAGATAGACA
GTCTCGCCCTTCTCTATGATTCCTGCTTTGTATCTTACGGAGATAACCTG
TCTCGCCCTTCTCTATGATTCCTGCTTTGTATCTTACGGAGATAGACAGT
CTCGCCCTTCTCTATGATTCCTGCTTTGTATCTTACGGAGATAGACAGTC
TCGCCCTTCTCTATGATTCCTGCTTTGTATCTTACGGAGATAGACAGTCT
CGCCCTTCTCTATGATTCCTGCTTTGTATCTTACGGAGATAGACAGTCTC
GCCCTTCTCTATGATTCCTGCTTTGTATCTTACGGAGATAACCAGTCTCG
CCCTTCTCTATGATTCCTGCGTTGTATCTTACAGAGATAGACAGTCTCGC
CCTTCTCTATGATTCCTGCTTTGTATCTTACGGAGATAACCAGTCTCGCC
CTTCTCTCGCAAAATTTCTTTCGATAGAGCCATTGCAGAATGCCAATTCC
ACTTAGAAAAAATGGCGAGACTCTAAAACACACAATTTCTTAAGAAATTG
TATAAAAGCACTCTCAAATTTGGTAAAATCGAGAACATTTTAAGAACAGT
TTTAAAACTCAAAAAGTTAAGAAAAGCCAAAGGTCTCAAACATTTTAGAT
TTTCTTATAAAGAAATGTGTTAACAAGAATAAGAATTATAAGAAGAATAT
GCTAAAAAAGAATAACAGAGCAAAAAAAATACTGTTCCATAAAAAGTTCC
ATAAGTATTCCATAAAATATAGAAGTAGATTCATATCTTAGTAGTGGAGT
AAAATCAAGCATGCTTGTTCTCTGAATTGATTATTCAAAAAGCCTCATTA
ATTTATCTACAAAATTGATTTTTACTCAAGTGTTTCATTAAATAAATTGT
TATCAACTGTTCAATCCGCGAGAATGAACGAAGCAAGTGTTATAAAACGT
GTCATTCCCATCTCAGTGAAAGTACTTTATCAGCATTTAAGCGTATGCGA
GGTCGCGGATAAAGTAATTGTCTCACCGCAGTTCGAATACCCTTCTTGCT
GAATTTGTTAGACAAGGTGCTTTTGTTTCCTTCCCATTCAAGTACTTCGT
CGACATCCGTAAAAAGATGTTCTCCGTTGTACCAAAAAGAAATGAGAGCT
CCCAACGACCACATATCTGCGCTGAATGTGTATTCATTGCCTTCGATCAC
CTCGGGGGCTGCGTAAGTGTAACTGCGTGCGTAAAAGATCTGCGTACCTG
CGTAATATCCCTGCTGGGTATCTCCGTCGACAAGCTTTGAGATTCCAAAA
TCGGAGAGTTTGAAAGTCGGAAGTTCGCTCCATTCGTTGGAAAAGCACAA
AATATTGTCAGGTTTAAGATCTCGATGCATAATTCTGTTTTCATGAAGGT
ATTCCAATGGGGATGCCAACTGCTCCATAACCTCCCATATCACATCTTCT
TTTATCAGCTTTTTTTCTGTCTTGCCTGACAGTTTGGTGCGAAAGTCAAG
CATTGTGCCTTTATTTGCGTATTCCATAACAATGGCTAATTCGTCATCAT
CAATGAAATGTTCGAAGTATTGAACAATGTTACCATGTTCCACATCTTGA
AGAATTTCAATTTCTTGTTTTGCACTTTCAGTGATGTGGCTGATTTCTTT
GACTGCGTAATATTCACCATATTGCTTCACTTTGTATACAACACCAAAAT
ATCCCTCGCCGAGTTTTTCAATCATTTCATATTCACTTCGCCATCCTTCA
TCCATCTTTGCTGATGTCTGAGATCTTTCTAAATGTGTAAATCTTGTGCG
AAAGACACAGAACTAGTTTATCAAGCGAGGCCGTTGAAAGTGAAAGAACT
TATAAAAGAAAAACACTTAGAGAGCGACGTCAATCGAAAAAAAAGTCTAT
CATGGAAAAGTTAAGAAAACAAATTTCAATGCTGTAAACAAACCGCAAAA
ATGAAGGGTGAAAGTAATTACAGCCAAACAAATTCCAAGACGCTCTATTC
TAAAAATTCTCTACTCTCAATTTGTAAGAAATTTTTCGCTATTGGCCAAG
CTTTTCCTTTTCGCCAATCCGGGGGGGGGGGTAGTCAGGCAAATGGAGGG
TACGGTATGTGCCGCCCTCGATATTTAGTCAAAATTGGTCAAATTTGTCA
CACTAAGGGTCGTAAAATTCACTAAAATTTCACTTTGTTTTTTCCTTTTT
AGCCCTGGTAACGGTCCAAGGGTTGAAAGTCGGGCGGCACCCCCCTGCGT
CAGCTCGCAACCTTAGTACTCCCAATTTGGGTCACAAATAAATCGAAACA
TACAGAAATTTAGGGATTAAAGAAAGATAAGATTAATGTTTTTTTGTTGA
AATTTTATTCACAGCAGTCAGCCGTTCAGACTTTTGTATCTTTAAAAAAC
CTTGCTTACAGGATGCTGGAGATTTCTTCTAAGACATATCATCAGAAGAA
GTCTTTTATCGAAAAATAATTTGACTAGTTTCTAAAAATTGTACGAAGAT
AAATGATGAGCGTCCTTTGAATAGTTCTTTCGTTCCCTTTGATCATACGC
TTCCAAAATCAATCTTTCTTCAAATTCGTTAATAAATTTCAATGTTTGCT
CTTTTGTCATAAATCCAAGAACACNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNCCATTCACAACGATCTTGCGCCAAAACAAACCAATTATCTTTAC
TGATATTAGCACGACGAAGTGCTTTATACATTCCACGCCCAAAAGTAAAT
TCAGGTGCACCCCTCGGTCTACGATTTTTGACCCACGAAGATTAAAATTT
CCTCGGCATTCTTTCAAAAGACATTCTAGACACGTGGCCGAGCCACGACA
ATTGCCTTCTTGTAATATAAACATCAATCGAATGGATATTTAAATTTTCA
AGCAACTCATTACTACTTATCCGGTGTAAATAAACGTGTCGACGATTTAT
TCGGTGCATTGAACGAGCACATCTATGATGAAATGTTCGTAATTGATTAT
AAAGATTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCC
GGGGGGGGGGGTAGTCAGGCAAATGGAGGGTACGGTATGTGCCGCCCTCG
ATATTTAGTCAAAATTGGTCAAATTTGTCACACTAAGGGTCGTAAAATTC
ACTAAAATTTCACTTTGTTTTTTCCTTTTTAGCCCTGGTAACGGTCCAAG
GGTTGAAAGTCGGGCGGCACCCCCCTGCGTCAGCTCGCAACCTTAGTACT
CCCAATTTGGGTCACAAATAAATCGAAACATACAGAAATTTAGGGATTAA
AGAAAGATAAGATTAATGTTTTTTTGTTGAAATTTTATTCACAGCAGTCA
GCCGTTCAGACTTTTGTATCTTTAAAAAACCTTGCTTACAGGATGCTGGA
GATTTCTTCTAAGACATATCATCAGAAGAAGTCTTTTATCGAAAAATAAT
TTGACTAGTTTCTAAAAATTGTACGAAGATAAATGATGAGCGTCCTTTGA
ATAGTTCTTTCGTTCCCTTTGATCATACGCTTCCAAAATCAATCTTTCTT
CAAATTCGTTAATAAATTTCAATGTTTGCTCTTTTGTCATAAATCCAAGA
ACACGCCATAAGTGGGATATATAGTAAACTCGATCTTTGCGGTAGAGGGT
TACTTTTGAGGGGTTTGGTAGTCTTCGATGAAGGACGTGATTCTTTATGT
AGTGACTGTTCAGATGATTTTTCCCGAACAGTAAACGCACTCGATCTAAA
ACGAAATTCAATCCGGTGAACATAAAAGAGAACAAAACACAATTCTTTGA
CATGCTTAACCAACCTCGTGCCGTGTATCCCAGCTTTATTTACGTTACTG
ACGGATGTCTGAGGATATTATCTGGCGCCGACAATACGCAAAGAACCAAA
TGGATGCTTAACTTTGAGGTAGTGTAAGCTCCAATTTCAGACTAACTATT
TAGAGTTCATGAAAGAACGAAGAAACGCGAGGTTTTAGGTTTAGTCACCG
GATACGAGTGCCCCTAAGAGGGCCTTCGGCCTTTAATTAGGAGTCTCAAA
TCCAACCCTGACCCTAGCTGGTAATGATCGAATACCCCCTGAGAAATAGC
GACAAAGAACGAGAAAAAATTACAATTAAACAACCACAATTTATTTTGGC
TGAAAATACCGGAATCATGCCGGAAATCGGCGTTTTTGCAGATTTTCATT
AGATTTTTACGCTAAATTTCATTATTTTTCACTCAAAAACATTATTAAAG
TCTATTCACGATAAGTGTGCACTCTTTTTTCTTTTACCTTTAACTTTTGA
AGGAATTTTTCAATCTTTATAAATTTGGTATCATTGGAAAGATAATAGTG
AGTGGAACAATTGAGAGAGAGAGAGAGAGAGAGAGGGAGAGGGAGAGAGA
GAGAGAGAGAGGGAGAGNAATAAACGTGTCGACGATTTATTCGGTGCATT
GAACGAGCACATCTATGATGAAATGTTCGTAATTGATTGTAAAGATTTTC
CGTTAAACACCAAGATTCTGCACCATACAGAAGAATGGGAAGGATGAGAA
TACAATAGGTAGCACCTTTGGCTTCATACGTTATCGATGGGTTTGAGAAT
AAAGAACTACGTAATGCACCAAAGGCATTACCTGCTTTTTTGATTCGACA
ACATACATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGATTTCTCAGGAGCGGAT
ACGAATAGAACTTCCGTTTTCGCAGGTTTGTCTGGATGTTCTAGGTCACC
TTTATGGATTTCCATACCGAAAAGATCGAAATGTTCAACAAGTAGCGGTG
AGTACTCAGCCAAAGTCTCGCGAGATTCGAAAAGTACTGCAGTGTCGTCT
GCATATTCGGAGTCTTCGACTGGAAATTCGAAACCTTTGGCATTGTAACA
ACGACCCGTCATCTGGAAATCATTTTTTGTGTGGAAAAGACAGAGTGGTC
GGTTCGTTTTCTTTCTCCAGGTGATCATGATTGCAGCGATGAAGATGGTG
AACAGGGCGGGTCCTAATATGTCACCTTGTTTAACGCCTATTGTTCATTT
CAGCGTGTGAGACACTTCGTCGACTACGAATTTCACTTGGAAGGATGAAT
GAAGTGATTTGAGCAGCGAAACGAGCTTCTTTGGCGTACCGAATTTCTCA
AGGACCATCCATAGAAGTTGGCGAGGGACCCTATCAAAGGCTTTGACAAG
GTCTAGAAACAGTATCCAAGTCTCTTGATTATGCTCTCTGCGTTTCTTTA
TTGCCAGCTTGACAGAAAACACCGCATCTACGCAACCCCTATCTTTTCGA
AAACCGCATTGAGTTTCATGATCTAGGCTCTCGATAAGTGGTTGAAGTCG
ACTGTGAATCAGGATAGCAATTACCCAAGAGGATTCTAAGAGCATAATGC
CTCGATAGTTCCCGGGCTTTCTTAAATCCCCCTTTTTAGGTAATATCCTG
AGGAGACCAGTGTTCCAATCGGTAGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTGATCGATTTGATGTGGTAGCTTTGAACGTGGATGAGTCC
AAGTTGCATAATTTCGTTTTCGGAAATATGTTGTTATTGCGACAAGGTTC
AACGTTTCGAGGAAGGTGAGAAAGCGAACACCGGCTTCATTGCGATGCGG
TAAGCCAAATTTTCCGATTGATGGTTTTTCCTCCTCAGGTTTTCTCTCAT
AGCTAATACCGAGAGATGAGTTACAGTCACATCCTATCAACAAGATATCC
TCCTTTGCTTTGTTACGTATACATTGTTCAAGATTATCAAGGAATTCTCT
CCAAACATTGTCTTTTGCAACGCCAATTGGAGCATAAGCAGAGATCAAAT
AAATGCTAACGTTTTTTCCTCGTGCGTCTTGACAAATTAAACGAACAGCC
ACAATCCGACTACCAAAGTTATTAAATACTGTTCTACCAGAAGCATTCCA
TGCTCTCGTTGCTTCTTTGCTCAGAACAATAGCAACACCTTCTTTTCCGC
GTTTACTTTTATCAACATTTGCATCAAGACCATGCTGAATGAAAGTACAG
TTATCGTGCTCAACAATAGAATGGCCGTTAAGCCATGACTCTTGAATACA
TGCATCAAAGATACGATGGTTATTGATTTGCTTACACAGTTCCTTGGTTT
TAACTTTTGACTTCAGTCCTCTGACATTTTGTGAAATTATATCAGTTGTT
TTAGTTTTGTTCGCTTTTTGTGGCATTCGGTCTTATTGGCTCGCGACACC
AAAGAGTCCGGGAGCTTGAATGTTCTTCTCTGGGGAAAAGTGGCAGACGT
AGTCCAGCGATCAAATCCTCCGTTGAGACGAACAGCTCTTCTTTCACCAC
ATTGTGTTGCTCTTTACATCATGTGTTGTTGATTGATGCTTGGTGTGGTG
GATCACCCCCAATCACCAAGTTGTGATGGAGGATTTTCTTTCACACCACA
CCTTCTTTTTAGTTGTATATCTTAGACTCAAATTTGGAGTTATGGTGTAT
CTTTTTATTTGTGGAACAATTTGAAATAAAAAAATCTTTAAAAAAATTCT
AAAAATGAAGATGAAAAGGAAGAAGAAAAAAAGGAAGATCTTGTATAAAA
GTGCTATAACTATCATTTTCACTGAAGTGAATCCTCGATCATCGAACGTC
ATCACTGTGAAAAAAATTCTCAAAAATAATCATTCAGTCAAAAGATATCA
AACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGC
TGTTTTTTGGGGTCAATCACTTATTAACTTTGTATCATAACTTTATATTG
AATAAATATTTTAATGAAATTTCTTCACAGTGATGATCTCCTAAGATAAA
AGAATCTCTCCAGTAAAAATGATAGTTATAGCACTTTTCTACAAGATCTT
CCCTTTTTTCTTCTTCCTTTTCATCTTCATTTTTAGAATTTTTTTAAAGA
TTTTTTTATTTCAAATTGTTCCACTCACTAATATCTTTCCAATGATACCA
AATTTATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAA
TTTATAAAGAACGAAGAATTCCTTCAAAAGTTATAGGTAAAAGAAAAAAG
AGTGCACACTTATCGTGAATAGACTTTAATTACAATACCTACGATCTCAC
ATGATTAAATTGTCAATAAAACTGAATATTTGACTCAGAAATTTCTAGAT
AATCGCTTGAACTGCCGATTTTTGCCGGAAAATGGTTTATCTTGAATCTG
TCGAGTTGTAGCTCGATTCAAAATGATAATACCTTAAATGTGACAGTGTC
CCATTTTCGAAAAAAAACCGGTTCTTTGGCAGTTCCTCGAGATTTGTAGT
TTTTTTCTAATTTCTTGCTCAAAGATGTGTATTAACCATGCCCAAATTAT
GACCTAGTCCGATTTCAATTTCTTTGCTTTATTTTTGCAGATATATCATT
TATTATGATTTACCGATTTATCATTTGTTAACCTCATTTACTTTTCCCTT
ACTTCCTTCTCTCTTCCCCCATCAACAATCAAATTTAACGCGCTATGGCT
TTTCGCTGAACGCTATATTGTCTGACTGATTGTTTTCATTTTTCTCCTTA
TTTCTGTCTGTCTCAGAAAAAGGTCCCCCTCTTTGAAATGAATTTTCTCG
AGTTCTATGAAAAGTTAAAGAATCAATCATTTTGGAAAGGGAAATGATAA
ACTTAAATTTTGAGGGGTCATTTGTCAAATTTGGTCAACTAGATCAAAAG
TTTTGATCTAAATGCTAAAACATTGCTTTTCAAAAAATTCTAAGAAAGGC
AAGAAGTATTAAATCATCATAAAGAAAATACTTCTTTTATCAATTTATTA
TAAATGATCAAAGTTTCTTCGTTCTATTCGTGGCCAGTTTTCATTGGCGG
TCAACAATCGAGGAGATGTTGAATGACCCCCAAGATCGCCTGACCTCACT
GTATATAGCCCATGAGCTAGACACTTTTTGGGGCTTACTCAGCGGAGGAA
GCCTCACTATGATTTTCGGAAGCCTTAATTACTATATTTTAAGAAAAATC
AGGGTGCTTTTTTCAAACTTACAGCTTTTGACCGAAGTTTTCAACTTTTT
TAAGGGGTGGTAAACGCGAAATTTTCATTTTTGATTGGATTCCCTTGAAA
ATGAAATTACAATGTCATCTTTAAAATAATATATATCGGTGAATAATGTT
CAAAAATGCACCAAATTGTCAGGAAATACTCCTAATACATGTTTTTTTTA
TAAGCATAACGCTTATAAGCATATGAAGGCTCAGGTTTGCAGAATTCCTA
AGTATAACATGAGCATATATGTCAGCCTAAAATATTTTTCAAGTGGTCAT
TTTTATCTGTTTAAAAAGGTTTGGTAGAGGTCAAGTCAAAAATAAGACAT
TCCACGGCTAGCTACATTCCACTGTTCCCAAAATCTGAACAAGTTTTTAC
AAAATTTCTGAAATTTCATTTTAAAAACTTGGCTCAGGGTGTATCATAAG
CATGATTCATAAGCATATAATAAGCATAAACTATGTCTGGATGCTTTGAG
AACTCAAGCATACACGAGCCTGACCAAGGGGCATACACTTGCTTATAAAA
AAAACAAAACATGTATACTATAATTTTTAAAAAACTGAAAGAAAAATTTA
AAAACAAATTTCTAGGGGGTTTGTACCGGTGTCACAGTAAAATATTACTC
CCCAAAATTTATACTCTCCAGTCATTATTTACTGGGAAATAATTACTCCC
CAGTAATCTTTTCCCAGGAAATTNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGAAAT
TATTACTTCCGGGAGTATAAATTTACGCGAAAATAATGACTCCCTTCGGG
AAATTTTTACTCCCCTGATAGTATACCAAAAAACTGGCATAGATCACCAT
CAACATTCGGTTTCCTAATCTTTTTTTCCTGTTTATCATGAACAAAAACA
ATATGGAAACTTTTACTGTTATTTTGACATTTAAATTGAATTTAATTTTC
TTGAGTGCGATTTGCTTGGGTTAGAAAATTGAGAGATATTTTAAAAACCT
GGCTACATCTTGACACTGCAACACTGTTTTCTTTATTTTGAAATAATTCT
TGAAATTTAATTCAAAAAATTCTTGTTCGTAGAGCTTTTTCTTGGCTCAA
TAAAAATTCTAATAAAAAGGCATCTTTCTTGACTATACTGATTTCGAACC
CCCCCCCGTTTATTCAACCCTCCCGTCTATTATATTTTACAGAAATTTCG
GACCCCCTCCCCCTTTTATATTTGGACCCCTCTATTATTCGGGTCCTAAT
TATATGGTTGATTACATTTAGCTTAGATTTGTAAAGGACGAGCGGGGCGA
TAAATCCGTAATAGCCCCGCTTTTTTGTAATCGCCCTGATGTAAACNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNAAGTATCGTACGATATTTTGATTGG
TTAACAAAATATCGTACGAAATTTTAAAGCCAATCAAAATAAGAGTGTCA
GTCGAATGTTTTTTTATAGTTATGAATGTTTTTATAAGTTTCGAAAAGAA
TAGCGATTGAGTGTTCTTCAATTCTTTTTTTGACCATATAATTAACGCGG
AATAACATGGTATTCTCGGGTGATTTTGGATTAATAACCCCTCGTTTCAT
TGAAATCACTTCAAAATGTTTTCAATGAACCTCGGGGTTATTAATCCCAA
ATCACCCTCTAAACCATGTTATTACTAGTACTTAGAGTAGAATATTTCAA
AAGGAAAAAAAAAATCGCTACAGTGGGGATAGCATTCTTTGATTTTTCCC
CGAACGGATGAAAATATTCTTGGCGTCACCAGGGGTACAGTTCAACGGGA
TGGGTGTGGGTAACAACGGGTCACTTTAACTTATAGATGATTTTATGGCT
AGGTTTTCTTTTACAGCAACCACAACAATAAAGTTTATGAATTACAGTAT
GCATACATTTTTAAAACGTCTCTACTTAGCAAGTGACTTCATTGATTGGA
ATGTTTAATTCGAATAGGCAATAGCCGGAATTCACCAGGGAGTCATAATT
TACTGGGAAAATAACACACTTAATTATCACATCTCATCTCTAAACAGTGT
TATTTGGGTTTCTTTACATAAATATATTAGAAATATGAGAAAAATGGCAG
GTTTGGGTCCGACTGGGGGGTGTCCGGACCAAAAAACGGTGAAAAACTCC
GGTAAATGGCCATTTTTGACCCATTTTAGCCTTACTTTCATATTTGGTCC
CTGAAAACGAATATTATGAGTTGTGTGAAAGCGTTCATCCATAAAGTTTT
GTAAAGAAAAGGTAAAGTATTGATTTTGGACCATTTCAGGTGGTTTCCGG
ACCAAAAAAGGCGAGTCTTTGTCTTACAATAAATTTAATACCCTCACACC
AGGACACCCGGTATGTCCAATCAGCATCCAGCTTGTTATCAATGTAGTCT
TCTAATAGATTAAAAGATCTTTTGAAAAACTGAAAATAATGAAGAAGATG
AAAATGCAAAATGATCGAAAGTACGACATGACTCAATTCACTGATATCAA
ATCTGTATTCAGTTAAGAACATAAGCCTTTGCGGACCATTATCCTAAGAA
AATAGATACACACAAAATGGGGAAAATAAGAACATGTTAAGATTAAAAAT
TTTATGTTCTTATAAAAAAGAACTTGAAGTAAATCTTAAAAAACTCATAA
AAAAACAACCTCCTTGAAAAGAAATGGTGAGAGTATACATTACTGAATAA
ACAAACTCTTTCCTGGTATTGATTTTTCAAGAAAATTTCATGTTTGAACA
GAAGCAGGGGCACTTATGAATAAAAACCCACCAAATTTTACTTTTTTTGA
CTAAACAAGTTTTAAAGCTGGAATTAGCAGCATTTTCAGATGAATACAAT
AATCTACCTATTCCCTGCTTCCCTAGAGGAGTTTCCCGATTCCCAGTATA
TCGAGAAAAAAAGTTTTGAAATCTTCGAAATATCCCCGAGATTTATCTTT
GTTATAAGAATCAGTATATACAAGTTTTGGTCGGGTGATGGAGTGTCGGG
GAAAGATTTCGTCACCCCCTCAAAATTTTCGTCACTTTCCCCCGACATTT
TTTCCCCGATAAGGTATTAATTAGCCTTTATATGACATACAGTAGCATTA
AAAAAAGTGCTGCTATTTCTACACATCTTTCATTATAAAGGTTATTTCAA
TCGACTTGATTCATTTAAAAGAAGTGGTGAGTGTGTGAAACCCGATTGTC
ATGATTTTCATTGTTTGAAAAGCGATGTTTTTTCTTCACGATTTTTTTCC
GGGACAGTGTACTTTAAATATTGCAAAATATAACTAAAGAGGTTTGAGCA
CTAAAGTAGGCGTATATGATTCCAAATGATGTTTGATCAGTAGAAAGTAG
AGTCAATACACTTTGAAAGTTCTGATATATGAGAACAAGATAAGAACAAG
AGATTTATTTTGAACCAACATATCGTCGACATTAACGAATTCAAAAAAGG
TAAGAATTCGAAAGAAAAGGTAACGGGTCTTGAATAAATTCAATTTATTC
TTTGCAATTTTGAGTTGACAATCTATAGACATGTCAGTTTTTGTAACCGA
TACAAGATTTGAAACGTTTATATTGTCAGCCTGTGGGTTTTCTACAAGTA
GTGCCGTATCTATCGGGAGGGTGTAGATTGGGTTTCGAAAAAGCTTCAAA
TTTTGTCAATCTTGTTTTCTTGTCGAAAATTCACTTCTATGCCTCTGAAT
AGGCGCAAAATTAATATTAATAAAAATCCACGAAGCCTTAAAAGGTTCTT
TATATGTTCTTAATATTTTGATCATCTTAGTCGTATGTTCTTATAGAAAA
ACGTGTATTACATTATACAAACGTTCTATGGCGAAAATTTTTATCCTCTA
CTTTTCAGATGTGGTTCAAATTATGTTGTATTGCTTTGATGGTTGCAATC
GCGACAGCCAAGGTAAACCTTTTGATCAAACTTGACAATCCAAATAAACT
GAATGCTATAATTTATGTGTGAATTTTAATATCATCGTTTGGGTCATTTG
AGCCGGGTATCTAGCTGCATGAAGGCTAGCTGTTAACAAGCCCCCCCCCC
CCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAACCCCCCCCCCCCC
CTGAGGAAACCAATATTTGGTGGAAAGATGAAAAAGTTGGAAAAAGGGCA
TCGCAGGCCAAAGTTTTACAATTTTTGTAGCAATACTTTTAACCTGGTCA
TTAAGTTTCTCAATAAATGGAAAGGTTCACTTTTAAACCGTCTCCGGAAC
TAAAGAATAAGAAACCCCTATTAGCTCATTAGAAAAGCTAAGAATCTCTT
CCTAGTAAAACAGTAGACTTTCGACTCACTCGATAACGAAATAAGTTTAA
AAACGGTCAAAATCTAAAAACTGTTTCTCATAAAAATCTGCTTTTTATCC
TACACAAATTTTGTGATCCACTTGTCTACGCTACTGCAAATTCAAACTGG
GCATAACAGGAGGACTGTATATTATATATTATCAATGCCTATCACGTGTC
AAAATTTGAAAAGGATTGAATAAATAGTTCAGAAGTTATCAGTACTTTAA
AATGTTTCACAATAAAGTCATAAAACCTGATCTGTACTGACCCTAAAATT
TTGCACAAGTACTCTTAATAAGATTTTGTTAAAAGTCAAAAAGTTTCAAG
TCGTTTAAAAGCTTTTTCTTCGAGATATACACAAAAGAATTCCAGCGTGG
TAGATCCTCCCCCCCCCGGGCTAATAGGGTTAACATCCCATGTCGGATAC
ATCCGTCATCGGCTTTGGATGAGTTAAAACCCACAGAATTTGATCACAAA
TTATTAGACCCATTACCTAGAAATACCTTCATTTAAGTGGCAATCCCCAT
TTAGGAAAATGGAAAATTCTTGCTTAGGGTTCAGTAAAATCCAAGGCTAC
CCTCTAGAAAAGTGAAAATATTTAAATATAAGTCAGATTGATGTATTATT
TAAATGACATTCCTTAACCTTCAGGATGAATTTCGCGGTGATGATCTGAG
AAAACGTGAAAAACGAGCTGTTCGGAATTTTGGTTTGTGTAACCGTGTCC
AGACCTATGGCCCTTCTCCAATCCGCAATTGTATCAAGGCAAAACGAATG
GATTTAGTCAAGGTGAAATGTCAGTTTACATTCAAATCACCAATCTCTGG
TTCAGTAACAGTTGTTTGTGAACGGAAGCCAAAAGTTGGTTGGTCTTGCC
CTATATCATCAAATGTCGCCATATTGAAGTGCTGTGATATATTCTGTGAT
TTGTGAAATAAAATCATAATTACTTTGAAATAATATCTCCAAATAATAAA
AATTGTCAGTTTAATGTTTTCTCCCCTAAAGCGGTGCCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013580XLOC_013580Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024203-exon-sc0000478-1575043694:180690..180743TCONS_00024203-exon-sc0000478-1575043694:180690..180743Clytia hemisphaericaexon
TCONS_00024203-exon-sc0000478-1575043694:179868..179969TCONS_00024203-exon-sc0000478-1575043694:179868..179969Clytia hemisphaericaexon
TCONS_00024203-exon-sc0000478-1575043694:179334..179382TCONS_00024203-exon-sc0000478-1575043694:179334..179382Clytia hemisphaericaexon
TCONS_00024203-exon-sc0000478-1575043694:164582..164635TCONS_00024203-exon-sc0000478-1575043694:164582..164635Clytia hemisphaericaexon
TCONS_00024203-exon-sc0000478-1575043694:163105..163469TCONS_00024203-exon-sc0000478-1575043694:163105..163469Clytia hemisphaericaexon
TCONS_00024203-exon-sc0000478-1510915933:180690..180743TCONS_00024203-exon-sc0000478-1510915933:180690..180743Clytia hemisphaericaexon
TCONS_00024203-exon-sc0000478-1510915933:179868..179969TCONS_00024203-exon-sc0000478-1510915933:179868..179969Clytia hemisphaericaexon
TCONS_00024203-exon-sc0000478-1510915933:179334..179382TCONS_00024203-exon-sc0000478-1510915933:179334..179382Clytia hemisphaericaexon
TCONS_00024203-exon-sc0000478-1510915933:164582..164635TCONS_00024203-exon-sc0000478-1510915933:164582..164635Clytia hemisphaericaexon
TCONS_00024203-exon-sc0000478-1510915933:163105..163469TCONS_00024203-exon-sc0000478-1510915933:163105..163469Clytia hemisphaericaexon
TCONS_00024203-exon-sc0000478-1491911889:180690..180743TCONS_00024203-exon-sc0000478-1491911889:180690..180743Clytia hemisphaericaexon
TCONS_00024203-exon-sc0000478-1491911889:179868..179969TCONS_00024203-exon-sc0000478-1491911889:179868..179969Clytia hemisphaericaexon
TCONS_00024203-exon-sc0000478-1491911889:179334..179382TCONS_00024203-exon-sc0000478-1491911889:179334..179382Clytia hemisphaericaexon
TCONS_00024203-exon-sc0000478-1491911889:164582..164635TCONS_00024203-exon-sc0000478-1491911889:164582..164635Clytia hemisphaericaexon
TCONS_00024203-exon-sc0000478-1491911889:163105..163469TCONS_00024203-exon-sc0000478-1491911889:163105..163469Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000478supercontigsc0000478:163105..180743 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0.702397	0	0	0	0	0	0	0	0	0.0767155	0	30.8983	23.429	2.11748	2.17679	1.3138	0	0	0	48.4745	31.7109	19.3349	17.1701	0.0894837	0.670162	197.011	289.657
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00024203 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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