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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024331 ID=TCONS_00024331|Name=TCONS_00024331|organism=Clytia hemisphaerica|type=transcript|length=914bp
GTCGAAGGCGATGGTCAACATGTCAACGGAGCAGTTGACAGTCGACAGCT
CCGGTAAATCAGGAAGTGGTAGAAAGAATATGATTCTTATGATTGTCCTA
GTCCTCGTTGTTGTCTTGGCAATAATCTTTGTGGCATTGTATGCAAGCAG
TAACAAGAAAAATGGTAACCTTGAAgtggaaattggaaaattgaatAATG
AACTAAAAGatatgAAGAAAGGTGGTTCAAATAAAACTACCATGGCTCCA
ACAACTGTCCCAACAACACCAGGAACAGAAGTTTATCATAATATTCGTTT
ACCTAAATACATTAGACCCATTCATTATGTAGTGGCTTTGGAAATTGATA
TGGTGCTAGAGTTTGTAGATGGTACAACAAACATCAAGACTGAAGTCTCA
AAACGCTCAAAATATATCATGGTGCACGCTATGAAATTTAATAACGTTAA
AGTCgttgtaaaaaaatttgatactcAAGAAAAATACCCCCTTGAGAAAG
AGCATGGTGATAATGGCGGCTTTTTATAcaaacaaaatctttattttgtt
attgaaGCTCATGATTATTTTGAAGTTGGAAATTATTCTTTGGAATTCAA
ATTCGATTATAAATTGCGAAAAGATTTGGCTGGATTTTATTTGTCTACTT
ACAATAATACAAAGGGTCAAATTGTGAAAGTCGCTGCTACGCAATTTGAG
CCCGTGGACGCCCGTTCAgcattcccatgttttgacgaACCAGCAATGAA
AGCGACTTTCGATATCTCAATGAAACGAGATAAAAGTTATCTTGCATTGA
GTAACATGCCGGTCATCAGAACTAAAGCTGATGGAGACGAAGTGACCAAT
TATTTTAAAACAACTCCCATCGTGTCCACTTACTTGATCGTGTTTGTAAT
TTGTGATTTCGAAA Run BLAST on NCBI transcript from alignment at sc0000487:83261..96762- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024331 ID=TCONS_00024331|Name=TCONS_00024331|organism=Clytia hemisphaerica|type=transcript|length=13502bp|location=Sequence derived from alignment at sc0000487:83261..96762- (Clytia hemisphaerica)
GTCGAAGGCGATGGTCAACATGTCAACGGAGCAGTTGACAGTCGACAGCT
CCGGTAAATCAGGAAGTGGTAGAAAGAATATGATTCTTATGATTGTCCTA
GTCCTCGTTGTTGTCTTGGCAATAATCTTTGTGGCATTGTATGCAAGCAG
TAACAAGAAAAATGGTAACCTTGAAGTGGAAATTGGAAAATTGAATAATG
AACTAAAAGGTAAGTGTGCCCAGTTGTTTATGTCAAGGCCTGGTTGGTAC
TAAGGTTTGCAGAGTGGGGTATGTTCAAGCTGAATTTTGAAAATTGACAC
TGTGAGAGACTGAATTTCGAAAATTTTACCCCCTTTTTAATGACGTTTTC
ACGATGCTGCGAGAGTATTTGTTTATTTTGATGGTATCTCGGGCAAATCC
TGTGCAAAAAATTAACGAATCAAATAATGCGTGACGGCCAGCAAGTTTCC
CTTTTCGGGAAAAATTTCTGGTTTTTCTCACTTGCCTTTTCGGGAAAAAT
TTCTGGGCCAAAAACTGTGTTTCTGCCATTTTGGTAAAATGAAGAGTGAA
AATAACGAAAAATTTTCCCATAAAAAGGGGTGGAACAACTGGCCGTCACG
ATTTATCGAAATTTTTTGCACAGGCCTTAACTTGCCTGAGATCTTAGGGA
AATGAAGAGTACGGGTGTTTTTTATTTATGTAAATTTAAAAAATCTTATA
CAAAACCTAGTTAAAGGGAACTAGAAAATCCTATTGATTCGGTTTCACCA
AACGAATGTGCCATGAACATAAAAACATATCCTTTCGTAAACTTAGCACC
CCTGGTTGCCACATTTTCTGGAGTTATTTCTGTTTTTTAAATGATTACAA
TTTGAATGAAAAAACAGTTGCTTCACACAAGAATTTTATTCAACAGTATT
GTTGGTTAACATAACCTGAAAATATCAAATTCAAAACCAAACCTTTGGGG
TCACCTAATCATTGTCAACTCAATGTTTAAAAAGCAAGCATAATCGCTGT
AAACTATAGATAAACTAACAAAATTGAAATATATTGAATAAAATAGCAAA
ATGAATGAAATAGATCGCCAAAATTTGTTCAAATGAGTTTTTGGCTATGG
TTATTCGTACTGAATAAAAAGGACACAGGCTTTCCAGAAAAATGCTAACA
ATGTGACATTGGAGAGATTTGATATGAAAAATGTCACTATTTTACGCATT
ATTGGCAATTTTGATTTTCCCGTTATCATGCAGCAGTGATGATGACCGTA
GAAAACTCGACCAGTTTTGTATGACATGGTGTTCTTGTAGACCGCATACA
GGTAATAATGATGAGAGTTTACCCAGCTGGCACACAAACACCCCTGCGTC
TGTGACCCAGTGGGATCCACCCCACTGGCCACCCCAGTGAATTTTTTTTC
CAAAAATGGCTCATTTTTCAGCCCCACTGGACAAATCACTCAACCCACTG
GAATGTTGTAGTAAAAAAACACCCCATTGAAAATGATAAAAGGTTTACAC
ATACCCCACTCGNTAGTAAAAAAAACCCTATTGAAAATGTTAAAAAGTTT
ACACATACCCCACTCGAAAAGCCCTTATTTTAACGTACCCCAGTAGAATT
TTTCTTTCAAAAAATCACCCCACTAGAGTTTTCTCGTGCCGTGGCACTCA
TAAGGTTTGGCTTCGCGTAAGCATCGCTCTCCCAGTGTCGTTCGAGTTTC
ATGGTATACGCCATGGCTTGGCAGCTCGCGTCTATCAAGTTGCACTGTCT
GTCAGCGCCGTGATTCCTACTCCTTCGTGGGTCGTAGGACCCATCCCGAA
TGCATTCGGAGGGCTCTTATCTATCTATCTATATGGTCATTTTAAAACGT
GGAAAGTGCCAAACGAGAGGGGTTGGAAATCAAAAATTTCTCTGTCAGCG
CAATTACGGTTGTACTTGGTCCTTTCTTTCTTTAAAGTTAGGTTCTAGCC
TCAAAAGTTTTCGAAAGGCTTTCTCACTTGCGTAGATACTGAAAGAAAGA
CCGCTACTTTAACCATGACTAAACATTACTAGGTTCCAGAGTTTATAAAA
TTTGATATAACCATACTGTTCCTCTATAACCCCCTTCCCCAGATCTCATT
ACATTTCATGTTACAGTACTGTAAGAGTAGATCCACCTGATCAAGATGAT
ATTTTTACTTTAGTAGCATGTAAGAAGCAGATTTTGACTAGCACTAAACC
AAAAGTTAGCCAGTACCTTCCATCGTTAAAACACGATAGAATTAAGTGGT
TTTTGTCTAACAGGCTAACCAAAATTTAGCTCATGCAAAAAATTCTTTCT
CGCCCCAGTGAATGTCAAGGAAATTTTTGCCACCCCACTCAATATTTTGA
AAGAATATTTTTCACCCCCAGTGAATTTCAGGTTTTTTCATTCTCACCCC
ATTGGGTACTCAACACCAACTGGGGCACAGAGACAGGGGTGTACATAACG
TTGTTTCAACGTTAATCTAATATTCATGACGTTCATATAACGTTAAATGA
ACGTTAAAACTACGTCGTATGCCAGCTGGGTAATATAGGTAGCTACAAGC
CAACCTCGTTCCCTGCGCATTATCAGCTTTTTGATGCGTACTGATAGCGC
TAGATAATACCCTGGCATTGGCTAGTTTTCGAACGCGTAAGATTACGTAA
TTCAAAAACAAAACGTAGGATTTCATTTGTTCCTGGGTTTGAAACCATTG
CATTGCAGTGTAACTTTGTAACGTCAGATTTTTTTATGACGTATTGTTTT
GAGAAGTTCCCCCTCTGAGAGGGNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNTGTAAATAAAGCCTGGGATACAC
GGGCACGAGGTTGGCTACAAGCCTCTCACCGTAATATTTGGCATAAAAGG
GGAATTCCCTCAAAATTTTGAAGCGGCAAGTGATTTTTATTAAGTACCTA
AAAGTACGGTTGGAAAGTTTTAGGCTTCTTTCATCCTATCCTCTAGTGAA
AAAGTTTCTATAAATAGGAAGTATATATATAGAGGTCTGCGATTCAGACT
ACCTTATCAGGGAAAACTTCGTCGGGGAAAAGTGACGAAATTTTGGACAA
GTGACGAATATTTTCCCCGGCGAAAATTTTCCCTGGCCTTAATGCGTTTA
CCAACTCCCAGCAAGTGACGAATTTTTCCCCGACGAAAATTTTCACCGAC
GAAAATTTTTCCCGACGAAGTTTTCCCCGATAAGGTACTTTATACGAAGG
TTGAGGAAACAAAAGGAAGTGGCCGTGCGCGTCACGCAAAAAGATGTTTA
AGTTTTGCCTAGAATTCACCTGTGATTGATTTTGATAAAATCTATAAGTT
AATAACAATTTGACACATTGTTAAACGACGATTTAAAGCAAAACCATAAG
CTTAATAGTCCGGCTAGACTATCTTTTTTCATAAACTTAAAAACAAGACG
AAAGGAAGCTTCTATATGTCTTTTAACAAAATGATTTTTTGGATGAAATT
CTATATATTTCTATGGTCCAGCGTAACCGAAACCTAAGGAACGTGATTGA
TGAGTTAGCAAAAAAATTATAAAATGAATGAAACTTATGGTATAAGATTT
TTGTTTTTCGTACTTATCATAAACGGTACCATTTGCAACGTTGTCAATGC
TGCAGGTGCTGATAATGCTGTTAGTAAAAAATGCAAATCGAACGAGTTCA
GATGTCGTTTGTGTGAATTGTTGTACAAAAGAATTTGTCAATTAGAATTA
TCCTCATCAGGTATAGGTTTTATTACTTTTTAAAATCGATCAATATTTTC
AATTATTCAGCGTCCAATACATCGAGTTTTAAGCCGAAGGCTAGAGACAA
ATCTTTAACCTTTCCCCGTTGGTAAATCAGTAGTGATGAATTTTACAGCG
CGCGCCACATATACACGCGTGCGGTCGCAAAAGGGTGGGTGGCGGCTAGA
AAAAGGGTGGAGAAGTTTTGGTCCCTTGCCTCCGCCCGAATTCAAAGAAT
TCTCAGGTGTTTATCACTGGCCATATGTACCCTGACTCAAGCAATAATCA
AAATTTACAGGAAAGTGTGACCAATGCTAATTTTTTTTGTTTTGAATGTC
GCGCACTTTCGTTTTTGTCCATTCACTTTTTTGAATTTTTTTGCTGCAGA
CGCAGAGCGGATGGATTCAGCGACAGCCCTTGGTTGGGTTTGGACCTTAT
AAAAACTTCCATACTCAGACAGATGCCTGCTTCGTATCTTGTGTTCGTTG
TACACTTCTTCCATTGGATCATCACATAATACATTAGTACATTTTTATGA
CACTGGCAATATGCACAGTCTGGTCTTGAGGGCTGATGTTTTTTATAAAA
AAAATGTACGAAAACTTCTACTGCTCTTGGGACGATTGGTCGAAACATGG
GACTGTTGATATCTGGCCTGTATTTTCACTTACTTTTTTTTTTTATTACT
CCACCAAGTTTATCAATAATACTTTATGTCATAACAAATTTCACTGCGCT
TGCTCTAGCGCGTGCCCTTTTAAACATAGTTCGGAAGGGGGTCACTACCC
CCCCTACCCTAGAGCTACCCCCCCTACCCTAGGTTCTTCCCCCTTTCAAA
ATTTGATGCTACCCCCCTCAAAATTTTAAAATCCTACCATAATTCTACCG
GTGAAAAAGCAAGAACATTCAGTGTAGAAAGAAAATAGAACACACTGCAT
TGCGAAAAAAATAGAATCATTTTGAATCGAATGTTTCAAACATACTAAAC
AATTAATAAAGAAGACGTTGCATTGTAAATTNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNCCCCCCCCTTTCTGAGATTTTCTGAACATC
GCTACCCCCCCCTTTATAAAGGGGGGGGTGCGAACTATGTTAAACTTTTT
CAATCAAATGACTAATGGACAGTTAGTCACACTAGGACAGTTACATCAAT
ATGCCTTCTTACCTGTCTTTAAAAATATAAATAAAAGTAATCACGGAAAA
GGACAAGAAAAAAAAAGACATGTGTGAGAACAGAGTAATCAAACTCGTTA
GAAAAAGTACCGTAGAGTCGTTTAATCTCGACATACGTCTTGCAATCTCG
ACACCGGATCTGTAGAATAATCAAAACAAACCTTGAATGAAATTCTTGGT
ATCATTCTTATCGAACAAGTTCATCCATCAAACTAGAAGTTCAGTAAACA
TTGCAATCCTTTCAATTAAAAANGAATGAAATTCTTGGTATCATTCTTAT
CGAACAAGTTCATCCATCAAACTAGAAGTTCAGTAAACATTGCAACCCTT
TCAATTAAAAAGAAAGCCAAATTATAAGCAGTTTTACACAACACACGAAA
CGCATGCAAACTTCCTCGTAAAAAACATTCTCGTGTCCATCATTAAAATT
TTACAACTTTATTACGCTTCAAGTCACGTGATAAAAATAATTCGCGCGCT
TAGCCTGGTTTCCCCTTCCTTATATATAAANNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNAAGACAATATTAATTAAAACTTGGACC
GAGACAGCGCTTCGATTTTTAAGGCCTTGTTTATACGCTAAATAAAAATA
ATTACGCACATGTAAATGGGTCATTGTTTGAGGTCTGGCAAAATTTCCGG
GAGATAGCCTATCCGGCTGTGCGCGGATCTAGGTGGGTTCCGCCTCCCCC
GTAGATCTTTTTCTTGGGAAGTTGATCTTCAAATTAGTTTTCAAGGTTGG
CTTGGCTCAAATTTTTTCATCTANNGAGGTTTGGTGAGAAATGGTGGCCG
AATTGCCGTTAGTCCCAAGTTAGAGCAGAGGTTTGTGCAAAATACCAAAC
AGTGTCTCTTCTACTGATGGTGGTGCTCCTTTTCATAGACGGTTTATTTA
ATTCCCACCAATAAGATTGCCACATTTTACACAGCCCTTCTTTTATGGCG
CCCTTGGCCTTTCAGTGCCTTGCCTGAAGGGCAGCGGCTGTAAAATCTCA
CCCTTCATAAAACACCTCATTTATATACTGTAAGTTCAGTTAGGGAAACC
ATCCAGGATCCTGCCATTCTATAAGCCAGCAAAAACTAAATGCCACTTGT
AAACTTAAGTTTCTTACTATTTTCCATCAAAAACAACCAAAGACATTGCT
ACTTCCCAAAGCTGGAGACCAAAAAAAATTATCTTCCAAGATTATGGCGC
CCTTTTAGATCTATTGTTTGGCCATCTAAAATGGTGGAAAGAGTTGCGGA
AAGACAGGGGCGCCTGTTAGCTTTGAGGGTGGTAACGCCAAAACGCCCAA
TATGATCTTCCAACAAAAAGCGAGTTAGTTATCGCGCGAGTTAAGTCATA
CACTCCACCGCAGCGCACAACAAACGGTGTTTTAGTGAATATCAATAATT
ATAAGAATATCTTATGTGCTTAAATTCAGTAAACTTTGAGTGCTTCATTG
AATATTAGGAAGATAAGACGATAAAAAATGCGCTGGATAATTTTCATTGT
AACAGTTTGGTCAATCATTGCTGAAAGTTTGAAAAAAAATTTCCGACACA
AAAAAAAACTTCAGCCAATTAAAAGCACAGTGTGATTATATTTACTATGT
TTGCTACATCGTCTAGGCTAAAAAAAGTGCGAAAAGACACAAACGTCAGT
GTTGTTATGATTTTTTAGATTGCGGTCGCGTACAGGAACTCGCCAAATGT
TCCTAACTGAAGTTGGTCTGATGTCGACTTCCAACAAGTGTTACGCGTAA
GCCAAATTGCGTATTACGAACAACCTCTAAATTGCCAAGTACAGGAGAAA
AAAAATCTAAATTCAAAATGGCGGCCAAGCCCACGATGATAACTATAAAA
AATCTTCGTTTCTCATTCAGCTATTGCAGCTCAATAAATCAATGAAATAA
TTTGAAATAAAAAGTAAACAAACCTTGAACCTTTCATGAATCCAAATAAA
TAAAAGTATTCATCTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNGGTCACTGACAAGGAGTTACGACTTCAGACTTTA
GATTCCAATTCTTGTATAGGCTGCAACTACACTGCCAAATGATNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNCACTTACTTACATAATTCATTTATGATATAACACC
CCTTTCTTAAATAAATGGCCTCTTAAAGTCTTTTATGTTTGCCGCAAGAA
GGAAGAAAAATTTAATTTGACCCCCGGTTTTTTCTCTCGTTTTCTAGCCA
TTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNATTTTTATCCAGGGAAATGCCGT
GGCCGCAATGTTTTGCTTTAGTGAGATTGACCATTTTGTTGTTTAGATTT
GAGCGGGCGAAATTTCTGTACAAACCAAAATAAGGCTTCGTTGGAATACC
GGTTGAAACACTTGTGATCCGATCCCTCTTCTAATTTCGTCATCCTTCCT
ACTCCGTCACCTAATGCAATGTAAAAATTATGGTAGTCTTCAGTTTTTGA
GACATGCCATTTAACCTAACCAAGAAGGAAACCAGACCTCACAAGTTAGG
CTAACTGCTGTTATGATCAGAAATCCTCCAAAGGAGCCCCCATCCATAAA
TAAATCCTGGCAGTTACATCAATATGCCAAAAACATTTTGTTCAACCACC
TTCACTTCAAGATAGGCCACCGTAGAATGAAGTTTCTTATAGGATGAACC
ATATTCATGTGGCTTTCAGCCTTGCACTCCATCACAGAGCCTATTTGAGA
TATTTTACTTGACTAGCCCAGAGAAAAATGTTAAACCTTTATTATTTGAA
TGCATGCCTTTTTGATACTCAAATGTAGAAAAATTAAAAAATTTTAACTT
GGTCATTAGTCAAAAAAGTCATTAAAATTGATTAGCCTCTGTGATGGAGT
GCAAGGCTGAAAGCCACATGAATATGGTTCATCATATAAAAGGAGTTCAT
TCTATGGTGGCCTATCTTGAAGTGAAGGTGGTTGAACAAAATGTTTTTGG
CATATTCATGTAACTGCCTGGGATAAAGCACCAACGACTGGGTGTATAGG
GGTCGCTCTCCTTTGTTCCAGGAACAAGCTCACTAATTCTTAGGGGTGTG
CCTACTACATAGGTTCTGCCTCCCCTGCTGCGTGAAATTTGCATTTTTTT
TATTAAAGAATCTACCTGCTTCTAGATTGATATTGACACCTGCCCTTATG
CCTAAAATTGTTGTTTTTGGCAATTTTTTTCTGTTTATTTCAAGGAAAGA
AAGCCAAATGTATTAACTTACCAGGTTGTATTTGTTGATGATAAAATTTG
GTCAATTGCCTATAAAGGTCTATGGTTGTTAGCTATCGAAAAATAATTCT
AACATTTTTCTGAATGAGCCGCCTCTGGATTTTTGACCTGGAGGTAAAAA
AAGTTAGAAAGTCTTTGTAAGGGTCAACAGGTTTTTTCCTTTTTTGGTTC
TCTTTCAGAAAAAAACCAAGCACAATTGAATCATTCTTGAGATTGTTGTT
GAGGCACTAGATATTGGAGACTTTTTATATAGCATTATTTAGCTATCCAC
CTGATTTTTTGTGTTCTACAAATTTGTTGACATAAATCTAAAGTATCATG
AGATATAGAGATTCCAGACAAAATCCAATCCGTCTGTAACTTAGGCAAGA
CTTTCCTACAGTATCTGCAAAGATTTAATTATCACAACAAACTTTTACCT
CTACAACAATGATCAAATTATTTAGAATGCTTACATCAGTTGCTTATCGT
TTATTGAATAAACATCAAATCTCAAATGATATCCCTCTTTCAGATAATCA
TATATTTAAAAAGGAAATCATCTATGTTGATCCAAATCTGAAATACAAAC
AAGATTTTTTTTAAATCATGGGAAATCCATCAATTAAGACACAAGTCTAT
ACATTTATGAGCTGACATTGTTGCAAAGTGTGTTTTTATTATGGCAGAAA
AATATGAAATTGAAGAGAATTCTTCATTGACATTTCAAGACTCTCCACGT
CACAAGAAAGGATTTTTTATTAGCAAAGGCCAACTTATAGTCTGCCTTTT
AGCTGTGATATGCTTGATAATAATTATAGCTGTACTGTCTGCTACATTCA
GTTGGTATGCAGCCAAGAATGATAATACTAATGGGAAGTCAGGTACTGTA
TAACTAGTTTCATAAGACCTGTATTTTTTTTATTTTTTTGGTCTATGAAC
ATTTGCAGATGATCTTTCATTTCAAATTTAATCATCATTTGCTTATAATG
ATTAAATTTTTAAAACAATTGCGTGNATAGTTTCATAAGACCTGTGTTTT
TTATTTTTTGGTATATTAACATTTGCAGATGATCTTTATTAAGACCAGAA
TATAGAAATATTATTAAAAATTTTTCACAGAAGATAAAGGCCCCCCCTAG
CGGTTTGCGTGAATGCGTGAATTGGAAAGCTTTGCGTGAACAAAAATTGT
GTGAATTGCGAAAAAAAACGTTGCGTGAATTTGGGAAAAAAATTTGCCTG
GTTGGTGAATTTAAGGTACGCTGGGGGGGGGCCTCATAGAGGAAGCATGT
TAAAAAGCATTATGTTCATACCATAAAATCGATAATCAATAATCAATCAT
TTCTGTAGGGTAATGTGTTGAAGTTACTGCGGTGAAAGGAATTAAATTAA
AGGGAAAATGTTTTTAGCTATAATAACTATTTTCCTTCTTTAATGAAATA
AAGTTTTGCAAAACAATTACTCATTTAAAGTCATGATTCAAAGTATTTCT
ATTTATAATACTATCTAAAAATATATAAATAATTTGTTTTATTTTGATAA
TATTTGTTTTAACGCATATTACAATGTCTAAAAGTATTAGAAACAGACAA
CATGTGATTTATGCTAATCTAGTCTTAAAAATCTAAATAAGATTTATGCA
TCCATTTTAATTTACAATTTCAATTTCTGTATCCAATATTTTTTTTTTTT
TCAGATATGAAGAAAGGTGGTTCAAATAAAACTACCATGGCTCCAACAAC
TGTCCCAACAACACCAGGAACAGAAGTTTATCATAATATTCGTTTACCTA
AATACATTAGACCCATTCATTATGTAGTGGGTAGGTTATTTCATTTAAAA
GTGTCAAAATGTGCTCCAATGAAAAATTTGCTGGAATACTCTCTTTTACA
GATTCTATTATTAGTTTAAGAATTTAAAATTTCAAGCTTCTTGCCATCAA
TTACATTCATACATTAAGACTTTTCCGTAACTTACGTTTTATTCCCTCTT
AGCTTTGGAAATTGATATGGTGCTAGAGTTTGTAGATGGTACAACAAACA
TCAAGACTGAAGTCTCAAAACGCTCAAAATATATCATGGTGCACGCTATG
AAATTTAATAACGTTAAAGTCGTTGTAAAAAAATTTGATACTCAAGAAAA
ATACCCCCTTGAGAAAGAGCATGGTGATAATGGCGGCTTTTTATACAAAC
AAAATCTTTATTTTGTTATTGAAGCTCATGATTATTTTGAAGTTGGAAAT
TATTCTTTGGAATTCAAATTCGATTATAAATTGCGAAAAGATTTGGCTGG
ATTTTATTTGTCTACTTACAATAATACAAAGGGTCAAATTGTGTAAGAAA
TCATTTTATTTGAAAATGTTGTTATAAAAAAGAATCTTATTTCCAATCAA
GCTATTATTATAATAACAATTACAACTTAAAATAATTTTCAGATAAGATT
GATAGAGAGTAAGGCACTATAAAAGGTAGCTAAAGTAATTTACCAGGAAA
TTTTTGTTCACCTTGACCAATTAAGTATGGCACTCCGCAACCTCAAATTT
TTGCTCCTACTGGTGGTACAGGACTGAAAAAAATTCAGCAATTTCATATG
ATACCAGTGGGACTTTATGAAAATTTCTCTGTGAAAACTATAAGTTGAAG
GTTAAGTGTTGCTACGATAGTGCTCTTACCAATAAAAGAAGTATGATAAA
ATTTCAAAAAAAAAACACATATTTTGCTATACACAAAGATTTTTTCAAGC
ACTTTGTGCTGGGGGGAGGGGGCCGTTTTTGTAAACTTAGATTGAATTTC
TAATATGCCTGAAAGGGAACTTCCTCAGCAAAACTGTACATTTAGGAAGC
TGGGGAACTTGTGGGTGTTCAGAGGGCAAAGCTCCCAAAAATTCTTGAAT
ATATAGATAATTAGTTATTGCTGCTCATAAAAAACTCACTGAGGAATTTC
CTTTTTTTCACAGGAAAGTCGCTGCTACGCAATTTGAGCCCGTGGACGCC
CGTTCAGCATTCCCATGTTTTGACGAACCAGCAATGAAAGCGACTTTCGA
TATCTCAATGAAACGAGATAAAAGTTATCTTGCATTGAGTAACATGCCGG
TCATCAGAACTAAAGCTGATGGAGACGAAGTGACCAATTATTTTAAAACA
ACTCCCATCGTGTCCACTTACTTGATCGTGTTTGTAATTTGTGATTTCGA
AA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024331-exon-sc0000487-1575043694:96554..96762 | TCONS_00024331-exon-sc0000487-1575043694:96554..96762 | Clytia hemisphaerica | exon |
| TCONS_00024331-exon-sc0000487-1575043694:84633..84758 | TCONS_00024331-exon-sc0000487-1575043694:84633..84758 | Clytia hemisphaerica | exon |
| TCONS_00024331-exon-sc0000487-1575043694:84121..84460 | TCONS_00024331-exon-sc0000487-1575043694:84121..84460 | Clytia hemisphaerica | exon |
| TCONS_00024331-exon-sc0000487-1575043694:83261..83499 | TCONS_00024331-exon-sc0000487-1575043694:83261..83499 | Clytia hemisphaerica | exon |
| TCONS_00024331-exon-sc0000487-1510915933:96554..96762 | TCONS_00024331-exon-sc0000487-1510915933:96554..96762 | Clytia hemisphaerica | exon |
| TCONS_00024331-exon-sc0000487-1510915933:84633..84758 | TCONS_00024331-exon-sc0000487-1510915933:84633..84758 | Clytia hemisphaerica | exon |
| TCONS_00024331-exon-sc0000487-1510915933:84121..84460 | TCONS_00024331-exon-sc0000487-1510915933:84121..84460 | Clytia hemisphaerica | exon |
| TCONS_00024331-exon-sc0000487-1510915933:83261..83499 | TCONS_00024331-exon-sc0000487-1510915933:83261..83499 | Clytia hemisphaerica | exon |
| TCONS_00024331-exon-sc0000487-1491911889:96554..96762 | TCONS_00024331-exon-sc0000487-1491911889:96554..96762 | Clytia hemisphaerica | exon |
| TCONS_00024331-exon-sc0000487-1491911889:84633..84758 | TCONS_00024331-exon-sc0000487-1491911889:84633..84758 | Clytia hemisphaerica | exon |
| TCONS_00024331-exon-sc0000487-1491911889:84121..84460 | TCONS_00024331-exon-sc0000487-1491911889:84121..84460 | Clytia hemisphaerica | exon |
| TCONS_00024331-exon-sc0000487-1491911889:83261..83499 | TCONS_00024331-exon-sc0000487-1491911889:83261..83499 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000487 | supercontig | sc0000487:83261..96762 - |
Blast
BLAST of TCONS_00024331 vs. Swiss-Prot (Human)
Match: ERAP1 (Endoplasmic reticulum aminopeptidase 1 OS=Homo sapiens GN=ERAP1 PE=1 SV=3) HSP 1 Score: 123.635 bits (309), Expect = 9.038e-31 Identity = 72/216 (33.33%), Postives = 123/216 (56.94%), Query Frame = 2
Query: 284 YHNIRLPKYIRPIHYVVALEIDMVLEFVDGTTNIKTEVSKRSKYIMVHA--MXXXXXXXXXXXXDTQEKYPLE-KEHGDNGGFLYKQNLYFVIEAHDYFEVG-NYSLEFKFDYKLRKDLAGFYLSTYNNTKGQIVKVAATQFEPVDARSAFPCFDEPAMKATFDISMKRDKSYLALSNMPVIR--TKADGDEVTNYFKTTPIVSTYLIVFVICDFE 913
++ IRLP+Y+ P+HY + + ++ GTT ++ S+ + I++H+ ++ + + + + PL+ EH + + A + VG Y++ + L + GFY STY +G++ +A+TQFEP AR AFPCFDEPA KA+F I ++R+ +LA+SNMP+++ T A+G + ++F T +STYL+ F+I DFE
Sbjct: 49 WNKIRLPEYVIPVHYDLLIHANLTTLTFWGTTKVEITASQPTSTIILHSHHLQISRATLRKGAGERLSEEPLQVLEH--------PRQEQIALLAPEPLLVGLPYTVVIHYAGNLSETFHGFYKSTYRTKEGELRILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHLAISNMPLVKSVTVAEG-LIEDHFDVTVKMSTYLVAFIISDFE 255
The following BLAST results are available for this feature:
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