TCONS_00024384 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024384
Unique NameTCONS_00024384
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length185

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024384 ID=TCONS_00024384|Name=TCONS_00024384|organism=Clytia hemisphaerica|type=transcript|length=185bp
CAGAGAGTGGGACAACAGGCATGTTTACATGTTGTTGTATGTTATTTCTC
ATCTCGTCTTGGTCTTGTATCAAATCGATTTTATTCGCTATGAAGATGGA
TGATATTGTTGACAGTCCAGCTTTGTAAAGATCTAACTCCTTTTTCAGGA
TTTCGAACTGGGAAAGCATGTCTGGTGATGAGCAA
Run BLAST on NCBI

transcript from alignment at sc0000491:51755..52237+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024384 ID=TCONS_00024384|Name=TCONS_00024384|organism=Clytia hemisphaerica|type=transcript|length=483bp|location=Sequence derived from alignment at sc0000491:51755..52237+ (Clytia hemisphaerica)
CAGAGAGTGGGACAACAGGCATGTTTACATGTTGTTGTATGTTATTTCTC
ATCTCGTCTTGGTCTTGTATCAAATCGATTTTATTCGCTATGAAGATGGA
TGATATTGTTGACAGTCCAGCTTTGTAAAGATCTAACTCCTTTTTCAGGA
TTTCGAACTGGGAAAGCATGTCCGGTGATGAACAAACCACAACATAtaat
ctatttttcatttttcttttcccaTTAGCCAGTATGCTTAAATTTCCATT
TCTGCAATATAAGACTTTTCAACTCTTCAATATTTTGACTGAATTTAGCA
GAGAGTGGGACAAAGGGCATGTTTACATGTTGTTGTATGTCATTTCTCAT
TTCGTCTTGGTCTTGTATCAAATCGATTTTATTAGCTATGAAGATGGATG
ATATTGTTGACAGTCCAGCTTTGTAAAGATCTAACTCCGTTTTCAGGATT
TCGAACTGGGAAAGCATGTCTGGTGATGAGCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013686XLOC_013686Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024384-exon-sc0000491-1491911889:51755..51923TCONS_00024384-exon-sc0000491-1491911889:51755..51923Clytia hemisphaericaexon
TCONS_00024384-exon-sc0000491-1510915933:51755..51923TCONS_00024384-exon-sc0000491-1510915933:51755..51923Clytia hemisphaericaexon
TCONS_00024384-exon-sc0000491-1575043694:51755..51923TCONS_00024384-exon-sc0000491-1575043694:51755..51923Clytia hemisphaericaexon
TCONS_00024384-exon-sc0000491-1491911889:52222..52237TCONS_00024384-exon-sc0000491-1491911889:52222..52237Clytia hemisphaericaexon
TCONS_00024384-exon-sc0000491-1510915933:52222..52237TCONS_00024384-exon-sc0000491-1510915933:52222..52237Clytia hemisphaericaexon
TCONS_00024384-exon-sc0000491-1575043694:52222..52237TCONS_00024384-exon-sc0000491-1575043694:52222..52237Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000491supercontigsc0000491:51755..52237 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00024384 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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