TCONS_00024407 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024407
Unique NameTCONS_00024407
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1927

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024407 ID=TCONS_00024407|Name=TCONS_00024407|organism=Clytia hemisphaerica|type=transcript|length=1927bp
TGAAAAAATGTAACTCAGGAGCGATACCAGAGTGCAAAAATACATAACTT
GTTTCGACTGCTCTGTTCTGTATAATTGTGAGCTTGATAAACAATAATGA
TCATATAGCAATTTTAGATATTCTCTCTCTAAAACATGCTGATGTATTGC
AGAAATCATCTATCACGGTTAAAACTGTCAAATAAAGTTATAATTTCTTC
ATCTCAATGCGGATGTTCCACTCAAGTCTCCCCACCTTTAAAGAAGAAAC
GAAAACTAATATACGCTAAGGGTAAAACATTTGTAGATTGGAAGCGTATC
TATATCAAGTCGGGTAATGGTGGGAATGGTTCAGCCTCATTTGTTCACTC
AAGGGACCATAAAGGGGGGCCAGATGGTGGTGACGGAGGACGTGGAGCTG
ATGTCATTTTCATTGCTGATGATGCTTACTCCCAACTTTCTCATCTGGAG
CATCAATACCGTGCTAAGAATGGAGGGAATGGTTCCAAGAAAAACAGGCA
TGGAAAGAATGGAGAACACATACATATACATATCCCCGTGGGTACTGTGA
TTACGAACTCAAATAGTGACAAAGAACTAGCAGATTTAACGAGAAAGGGA
GAAGCATATACAGTTGCCAAGGGTGGATCTAAAGGTCTTGGTAATGTCCA
TTTCAAGTCACCTACAAGAGTGCGCCCAAGAGAGTTCACAGAGGGAGGAA
CAGGAGAAGAAATATTTGTAGAGTTGGAACTGAAATCAATCGCTGATATT
GGCTTGGTGGGCTTTCCGAATGCTGGTAAATCTTCTCTCCTCCATTGCAT
TTCACGTGCAACACCAAAGATTGGAGATTACCCTTTCACAACATTGAAAC
CAAACATCGGTGTGATGAATTTAAAAGATGACTTGACTGTTTCAGTTGCT
GATATCCCTGGCATAGTCAAGGGAGCCCACGAAAACGTTGGTCTTGGACA
TGAATTCTTACGCCACGTTGAACGTTGCCATATGTTAATGTATGTTATGG
ATTGCTCATCACCGGACATGCTTTCCCAGTTCGAAATCCTGAAAAAGGAG
TTAGATCTTTACAAAGCTGGACTGTCAACAATATCATCCATCTTCATAGC
GAATAAAATCGATTTGATACAAGACCAAGACGAAATGAGAAATAACATAC
AACAACATGTAAACATGCCTGTTGTCCCACTCTCTGctaaattcaatcaa
aatattgaaGAGTTGAAAAGTCTTATATTGCAGAAAAGGAAATTTAAGCA
TACTAGCTAATgagaaaagaaaaacgaaaaatagaTTATATGTTATGGAT
TGCTCATCACCAGACATGCTTTCCCAGTTCGAAATCCTGAAAACGGAGTT
AGATCTTTACAAAGCTGGACTGTCAACAATATCATCCATCTTCATAGCTA
ATAAAATCGATTTGATACAAGACCAAGACGAAATGAGAAATGACATACAA
CAACATGTAAACATGCCCTTTGTCCCACTCTCTGCTAAATTCAGTCAAAA
TATTGAAGAGTTGAAAAGTCTTATATTGCAGAAATGGAAATTTAAGCATA
CTGGCTAAtgggaaaagaaaaatgaaaaatagattaTATGTTGTGGTTTG
TTCATCACCGGACATGCTTTCCCAGTTCGAAATCCTGAAAAAGGAGTTAG
ATCTTTACAAAGCTGGACTGTCAACAATATCATCCATCTTCATAGCGAAT
AAAATCGATTTGATACAAGACCAAGACGAGATGAGAAATAACATACAACA
ACATGTAAACATGCCTGTTGTCCCACTCTCTGAGTAAATTCAGTCAAAAT
ATTGAAGAgttgaaaaatcttttattgCAGAAATGGAAATTTAAGCATAC
TGGCTaatgagaaaagaaaaatgaaaaatagattatttaggttgtatttt
atttcttttaaagtatGATGTTTGGTG
Run BLAST on NCBI

protein sequence of TCONS_00024407-protein

>TCONS_00024407-protein ID=TCONS_00024407-protein|Name=TCONS_00024407-protein|organism=Clytia hemisphaerica|type=polypeptide|length=374bp
MLMYCRNHLSRLKLSNKVIISSSQCGCSTQVSPPLKKKRKLIYAKGKTFV
DWKRIYIKSGNGGNGSASFVHSRDHKGGPDGGDGGRGADVIFIADDAYSQ
LSHLEHQYRAKNGGNGSKKNRHGKNGEHIHIHIPVGTVITNSNSDKELAD
LTRKGEAYTVAKGGSKGLGNVHFKSPTRVRPREFTEGGTGEEIFVELELK
SIADIGLVGFPNAGKSSLLHCISRATPKIGDYPFTTLKPNIGVMNLKDDL
TVSVADIPGIVKGAHENVGLGHEFLRHVERCHMLMYVMDCSSPDMLSQFE
ILKKELDLYKAGLSTISSIFIANKIDLIQDQDEMRNNIQQHVNMPVVPLS
AKFNQNIEELKSLILQKRKFKHTS
Run BLAST on NCBI

transcript from alignment at sc0000491:51610..61548-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024407 ID=TCONS_00024407|Name=TCONS_00024407|organism=Clytia hemisphaerica|type=transcript|length=9939bp|location=Sequence derived from alignment at sc0000491:51610..61548- (Clytia hemisphaerica)
TGAAAAAATGTAACTCAGGAGCGATACCAGAGTGCAAAAATACATAACTT
GTTTCGACTGCTCTGTTCTGTATAATTGTGAGCTTGATAAACAATAATGA
TCATATAGCAATTTTAGATATTCTCTCTCTAAAACATGCTGATGTATTGC
AGAAATCATCTATCACGGTTAAAACTGTCAAATAAAGTTATAATTTCTTC
ATCTCAATGCGGATGTTCCACTCAAGTCTCCCCACCTTTAAAGAAGAAAC
GAAAACTAATATACGCTAAGGGTTGGTATTTACCATGTAGTTTATTTTCT
ATTGTCTAAATAATAACTGTAAGTTGGTCTAATATCGACATCCCTCCTCT
AATTCCGACACCCTTCTTTAGAGACAGGAATAATATGAAAGCTTTTGAAT
CACTGATTGAAAAAGGATTATTCCTCTCAGACCACTAAGCAAAGTAAAAC
AGTTTTAACCTTACTATCAATTTCAGGTGATAAAAAGGGTGTCGGAATTA
GGGGAGGGGTGTCGACATTAGACTAAGTTACGGAGGTATATAAGCTAATT
TATTGTATGTTCTGTGATTGAAAACCTTGGTTTGAAAACTATAATGAGAA
TGCAACCTTTCCTTAATCCTAATTGGTTGATCACAAATTCCATTGCATTT
TTCATTTTGCCAGGTAAAACATTTGTAGATTGGAAGCGTATCTATATCAA
GTCGGGTAATGGTTCAGCCTCATTTTTTCATTCAAGGTATGTATAACGTA
TTCCTATTTGAATCAAGACATTCTTATATAGAAAAACAATACACAAAAAC
AATAACATTATATAAAAGATGTGCACTAGAAAGGTGTCATCAGCGTTTTT
TGGAGCTCTTTGNCTCTATGTCTCTCCTTTCACTTTCTTCCTTCCGTTTT
TGTTCTTCGGCAGATTTTATATCTTCTTTTTGCTTCTTGGTAATCTTGGC
GTATGTTTTCTTTGATGTTTCCTTTATTATTTCTGCTGTGTGCTTTATTT
CCTCCTTTATCATGCTTCTTGTCTTTTCCTCCATCTCTTGTAGTTTTCCT
GCCAGAAAGGTTTTTAGGTCATATACCTCATTGTTCAGTTTTTGTATGAC
GTCGTCTTTCTTTTGAAGTTCATTTTGCATCATATGTTGAGTGTTTTTCC
CTACTTTATTTCTTAGGTTTTTCGTTATTCGTACGCAGTTTGAACATAAG
TAATGATCGTTGTAGGATGTCACGAATATTTGTAGTTGATACAGGGGTAA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNTGTTGTTTTCATGAATTTTGATGTTTTTATTTGTTTTCAGCCATTT
TTTCGAAGAGCGTTGCAAAAGCGTCTGATCTAGTTGACGTCAAATAAAAA
CTGATCTTAGTAACTGATCAAAGTCAGTTGCTTAAAAAAACTCTACCTTT
TCCGTTATAAATCTTTCAAAGCAAGCGATTAATTCTTTCTTTCCAAATGC
AAGCAATGGGAGTTACAATGGGGATCTTCCTTTTTAAAGGGATGGGAGGA
GAGAAAAAGAAATCAAATTTAATTGTTGCATGGTAGTTCTTAATTCTTTT
TTTCGAAGTTGATTACAAATAAACTGAATGTGCATTAAGAAACTTGAACA
AAAGACAGAATTTCGACAAACAGAGAGCTAAGGTAACTCAATAGCAAACT
AGATTTCGGAAAGGGCTAGCTTGTTTTTACCGAGTTTGTTATTTATTGCT
CTTTGTACCCACCTTCTAGCTGTTCTAATGTAAATGGTTTTGACAACACA
ACATTATTATTTTACCAAAAAAATCATGATCGATTCTATTTTTTTGTAGG
ACGAGTTTAGCTACAATATATAGACTCAATGTATCTTTTCCTCTCCTGTT
TACTTTCTACTTACATGAAAAAATGTAACTCAGGAGCGACACCAGAGTGC
AAAAATACATAACCTGTTGAGACTTCTCTGTTCTGTATGATTATGAGCTT
GATAAACAATAATGATCGTAAAACAATTTTAGATATTCTCTTTCTAAAAC
ATGCTGATGTATTGCAGAAATCATCTATCACGGTTAAAACTCTCAAATAA
AGTTATAATTTCTTCACCTCAATGCGGATGTTCCACTGAAGTCTCCCCAC
CTTTAAAGAAGAAACGAAAACTAATATACGCTAAGGGTTGGTATTTATGA
TGTAGTTTATTTTCTATTGTCTAAATAATAACTGTAAGTTGGTCTAATAT
CGACATCCCTCCTTTAATTCCGACACCCTTCTTTAGAGACAGGAATAATA
TGAAAGCTTGAATCACTGATTGAAAAAGGATTATTCCTCTCAGACCACTA
AGCAAAGAAAAACAGTTTTAACCTTTCTATCAATTTCAGGTGATAAAAAG
GGTGTCGGAATTAGAGGAGGGGTGTCGACATTAAGTTACGTAAGTATAAA
GCTAATTTATTGTATGTTCTGTGATTGAAGACCTTGGTTTGAAAACTATA
ATGAGAATGCAACCTTTCCTTAATCCTAATTTGTTGATTACAAATTCCAT
TGCATTTTTCATTTTGCCAGGTAAAACATTTGTAGATTGGAAGCGTATCT
ATATCAAGTCGGGTAATGGTGGGAATGGTTCAGCCTCATTTGTTCACTCA
AGGTATGTATAACGTATTCCTATTTGAATCGAGACATTCTTATATAGATA
TACACAAAAACAATAACATATCATATAAAAGATGTGCACTAGAAAGGTGT
CATCAGCGTTTTTTGGAGCTCTTTGTTTAAAAAGCAATTGAAATAACAAC
TTTGAATTTGAAGACCCCCTTTTTAAACAGCTGTTTGTAGTAAATTTTCC
AATTCTCACAAATCAAATATTATAACAGTGTCAAATGTCAAATGTCAAAT
CAAGTGTCAAATGGAGGGGTTGCCAGTTCAATTCCAAGCTAGGTTAAAAA
TTAGATAATCAGACCCTTGGACAAATGGGAAACGGGGCTAAACTTAAAAT
GTTTTTGCTTCTTTTTTATGAGAAAAAAGTGTAACCAAGATAACAATGAT
AGGTGTTTATTGCCTGGCACTAAGCACTCAAAAATATTTTGAATATCAAA
AGAGTGGACTGCGTGGATGAGTAGCAAGTCACCAAGCCTCTTCAAATGAA
TGTAACAACCTCCTTGAAAACAAAAGGAAAGGTCAATTATGGACCAATTC
TTTTAGAGAAAAAAATATCTTGATTTCTATTCTATTTTAATTAATTTGTT
AGCTCATTTTAGAAATTTAATAGGTCTTTGATCTCTCTGATCAGTCTGAA
TTCTAATTGAGAAAATTATATTAAAAAAGGAATATGTGAAATTCTTTCAT
TACGCCATTAGAGCTCAAAAAACACCAATGAGACCTTCCTATGTGCACAT
CTTAGGAATAGTTCAATTCAAATAAAAACGTTATATAATTATTTTTGAAT
TGAAACTAATGAAACATATGATTCTCATTTTACTCTTAAAATAATTATAA
ATGCTTTCTTGCAGTTTCTTAAAATATTTTTTTTTCAGTTGGTCCCTTTG
ATTGTGGTCTTTTTTCTAAAACGAAATTCATTGCTTCAAATTAGCTCATT
GAACAAATTTGATTTTTTCTTCATAAGGGACCATAAAGGGGGGCCAGATG
GTGGTGACGGAGGACGTGGAGCTGATGTCATTTTCATTGCTGATGATGCT
TACTCCCAACTTTCTCATCTGGAGCATCAATACCGTGCTAAGAATGGAGG
GAATGGTTCCAAGAAAAACAGGCATGGAAAGAATGGAGAACACATACATA
TACATGTAAGTGTGTTAATATGTTTTTATTGTTTTTATTAAATGGNAAAT
GGAGAACACATGCATATACAGGTAAGTGTGTCAATATATTTTCTTATTGA
TTAAGTGGAATGTCCTTGTTTATGTTTTTCTGTAGAAATAATTTTGAAAC
TACTTAAAAGCTACTTTGAAATATTTTTGTGGTCATGCTTCTCTAAATAT
TAAAATATTATAAGCAACATAAAATATAAACATTGTTCGAGACATGTCCT
GCACGTTTTTTTTATAAGGAACTTTAACTTGGCTCCAAGTCTGGATTTCC
TTATTTTTCCAGAGAATTTCAGCCTCAAAGTTCCTTAACGGGGCTCTTAT
TTACTAAGCTGCCAAGTTTGGATTAATAGGTTACTTTGTTAAACAATGGA
CTACAATACAGAAAAACGCGTTTTTCAACATTGTTTTGTCAATATTTATA
AACGTTTTGTTTAGATTTTTGTAAACGCGTACAAGTTCAAGTTTAACTTG
TACTGTTTCTTAACTTTTTTTCTTATTCTCAGCCTGAGCAGTTCCTTAAC
AATTCCTTGTTTTTTAAACCATTTTCAGCCTCAAGTTCCTTATAAACAAC
GTGTTCCTTATAAAACAAAGACAGCATGTGTGATTTTTAGATTTTAGATT
TTTGATTTGGGATATAGTTTTTTTTGTAACTATTTTTATGTGCCTTTCAA
CTGATCCAGTGACAACACTTTTTTGAATTCTTTACACTATTGAAACATCT
TTACATTTTTATTTTGGCTGCAGATCCCCGTGGGTACTGTGATTACGAAC
TCAAATAGTGACAAAGAACTAGCAGATTTAACGAGAAAGGGAGAAGCATA
TACAGTTGCCAAGGGTGGATCTAAAGGTAGGCACATCACATCTACTTTGG
AGCAAAATCGACTATAATTGCAAGGTCAATTTTCTTTCTTATTATGTTAT
TTCCATTGCATGACTTTGTAATAATTCTTCATTAATTTTAATGATTAATT
AATATAAATTAATCATAATTTTTAATTTAAGGCCTAGGGGGTAATCCAGA
AGAAAGCAACTTATTAATTAATCTTTTGTGATTCTTTTTTCTTTACGAGA
TGATAGCTGTGAATGAAATAGTTGTTTTGCATTTTTGGTAACTTTTAAAA
GGTCTTGGTAATGTCCATTTCAAGTCACCTACAAGAGTGCGCCCAAGAGA
GTTCACAGAGGGAGGAACAGGAGAAGAAATATTTGTAGAGTTGGAACTGA
AATCAATCGCTGATATTGGCTTGGTATGAGCATTTATTTGAATAGAGAAT
TAAAAATGACATCACTAGCCCCCTGTTGCAATGAAATTGCGTCAAAANTG
AAATCAATCGCTGATATTGGCTTGGTATGAGCATTTATTTGAATAGAGAA
TTAAAAATGACATCACTAGCCCCCTGTTGCAATGAAATTGCGCCAAAAAT
GATTTTTTTTTGTCCAATCTCTCAAAGGAATGCTCTAAATAAGTTTGAGT
TTATCAACCCAGTGATATTCATAATGGAAGTTAAATCGTAGCTTGGATCA
TGAGATTTACGTTTGGCTACGTTTCGAGAGATTCTTCTCCCATCATCGGG
AAATGTAGAGGATGTTTTCTCCACTGTTTGTACTAAGACATTCTGTTATG
GCGCGCCAAAGCGGAAATAAATACTATCTCTCATTTCGCGACACTACCTT
TCATTTCACGACACTATCTTTCACTTTGCGGCACTATCTTTCATTNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNGCGGCACTATCTTTCATTTCGCGACACTATCT
TTCATTTCGCGACACTATCTTTTATTTCGCGACACTATCTTTCATTTCGC
GACACTATCTTTTATTTCGCCACACTATCTTTATTAAAACGACACTATCT
TTTTTAAAACGACACTATCTTTTTTAAAACGATACTATCTTTCCAAAAAA
CATTATCTTAATTGAAACAATACTATCTTTTTTACGGGATACTATCTTTT
TTATGGAAGCCGAGAAGTGCCATCGACAAAAAAATATTTAATTTCNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNAGTGCCGCGAAATGAAAGATAGTGCC
GCGAAATGAAAGATAGTGCCGCGAAATGAAAGATAGTGCCGCGAAATGAA
AGATAGTATCGCGAAATGAAAGATACTATTTATTTCCGCTTTGGCGCGCC
ATATTCTGTACCCATAATTATCAAGTGTAATTTCCTTGCAAGGTGTGAAT
CCCCATGTTATCATAGTTGTAAGGTAAAATAGCTCTTGAACTTATGAGAT
TACTCATTACTGTGATTTCCATTTTGCCTCTCTGTTCGGTTGGGAACCCA
AATATTCTCTCAAATGAACTTTGTTTGCATTTATAGGTGGGCTTTCCGAA
TGCTGGTAAATCTTCTCTCCTCCATTGCATTTCACGTGCAACACCAAAGA
TTGGAGATTACCCTTTCACAACATTGAAACCAAACATCGGTGTGATGAAT
TTAAAAGATGACTTGACTGTTTCAGGTTTTTATCTTTCGTTTCCTTGTGT
TAACACATTTCTGCCTATTACTTCTTAGTAACATTACCTGACATTCTAAG
AATTTCATAAAAGTTTGCTTGATTTTGCTCCTCAATTTCTGAATATATGG
GGTTTCAAATAATTTTCATGACTTTTAGTGGATCATGTAAATTTGAGATA
TTTTATTCTTGTTTACTCATTAAAAAACCCAAATTATTTTTATTTGTAAC
CGTTTAGTTGCTGATATCCCTGGCATAGTCAAGGGAGCCCACGAAAACGT
TGGTCTTGGACATGAATTCTTACGCCACGTTGAACGTTGCCATATGTTAA
TGTATGTTATGGATTGCTCATCACCGGACATGCTTTCCCAGTTCGAAATC
CTGAAAAAGGAGTTAGATCTTTACAAAGCTGGACTGTCAACAATATCATC
CATCTTCATAGCGAATAAAATCGATTTGATACAAGACCAAGACGAAATGA
GAAATAACATACAACAACATGTAAACATGCCTGTTGTCCCACTCTCTGCT
AAATTCAATCAAAATATTGAAGAGTTGAAAAGTCTTATATTGCAGAAAAG
GAAATTTAAGCATACTAGCTAATGAGAAAAGAAAAACGAAAAATAGATTA
TATGTTATGGATTGCTCATCACCAGACATGCTTTCCCAGTTCGAAATCCT
GAAAACGGAGTTAGATCTTTACAAAGCTGGACTGTCAACAATATCATCCA
TCTTCATAGCTAATAAAATCGATTTGATACAAGACCAAGACGAAATGAGA
AATGACATACAACAACATGTAAACATGCCCTTTGTCCCACTCTCTGCTAA
ATTCAGTCAAAATATTGAAGAGTTGAAAAGTCTTATATTGCAGAAATGGA
AATTTAAGCATACTGGCTAATGGGAAAAGAAAAATGAAAAATAGATTATA
TGTTGTGGTTTGTTCATCACCGGACATGCTTTCCCAGTTCGAAATCCTGA
AAAAGGAGTTAGATCTTTACAAAGCTGGACTGTCAACAATATCATCCATC
TTCATAGCGAATAAAATCGATTTGATACAAGACCAAGACGAGATGAGAAA
TAACATACAACAACATGTAAACATGCCTGTTGTCCCACTCTCTGAGTAAA
TTCAGTCAAAATATTGAAGAGTTGAAAAATCTTTTATTGCAGAAATGGAA
ATTTAAGCATACTGGCTAATGAGAAAAGAAAAATGAAAAATAGATTATTT
AGGTTGTATTTTATTTCTTTTAAAGTATGATGTTTGGTG

Coding sequence (CDS) from alignment at sc0000491:51610..61548-

>TCONS_00024407 ID=TCONS_00024407|Name=TCONS_00024407|organism=Clytia hemisphaerica|type=CDS|length=7875bp|location=Sequence derived from alignment at sc0000491:51610..61548- (Clytia hemisphaerica)
TTGCTGATATCCCTGGCATAGTCAAGGGAGCCCACGAAAACGTTGGTCTT
GGACATGAATTCTTACGCCACGTTGAACGTTGCCATATGTTAATGTATGT
TATGGATTGCTCATCACCGGACATGCTTTCCCAGTTCGAAATCCTGAAAA
AGGAGTTAGATCTTTACAAAGCTGGACTGTCAACAATATCATCCATCTTC
ATAGCGAATAAAATCGATTTGATACAAGACCAAGACGAAATGAGAAATAA
CATACAACAACATGTAAACATGCCTGTTGTCCCACTCTCTGCTAAATTCA
ATCAAAATATTGAAGAGTTGAAAAGTCTTATATTGCAGAAAAGGAAATTT
AAGCATACTAGCTAAGTGGGCTTTCCGAATGCTGGTAAATCTTCTCTCCT
CCATTGCATTTCACGTGCAACACCAAAGATTGGAGATTACCCTTTCACAA
CATTGAAACCAAACATCGGTGTGATGAATTTAAAAGATGACTTGACTGTT
TCAGGTCTTGGTAATGTCCATTTCAAGTCACCTACAAGAGTGCGCCCAAG
AGAGTTCACAGAGGGAGGAACAGGAGAAGAAATATTTGTAGAGTTGGAAC
TGAAATCAATCGCTGATATTGGCTTGATCCCCGTGGGTACTGTGATTACG
AACTCAAATAGTGACAAAGAACTAGCAGATTTAACGAGAAAGGGAGAAGC
ATATACAGTTGCCAAGGGTGGATCTAAAGGGACCATAAAGGGGGGCCAGA
TGGTGGTGACGGAGGACGTGGAGCTGATGTCATTTTCATTGCTGATGATG
CTTACTCCCAACTTTCTCATCTGGAGCATCAATACCGTGCTAAGAATGGA
GGGAATGGTTCCAAGAAAAACAGGCATGGAAAGAATGGAGAACACATACA
TATACATGTAAAACATTTGTAGATTGGAAGCGTATCTATATCAAGTCGGG
TAATGGTGGGAATGGTTCAGCCTCATTTGTTCACTCAAGATGCTGATGTA
TTGCAGAAATCATCTATCACGGTTAAAACTGTCAAATAAAGTTATAATTT
CTTCATCTCAATGCGGATGTTCCACTCAAGTCTCCCCACCTTTAAAGAAG
AAACGAAAACTAATATACGCTAAGGTTGCTGATATCCCTGGCATAGTCAA
GGGAGCCCACGAAAACGTTGGTCTTGGACATGAATTCTTACGCCACGTTG
AACGTTGCCATATGTTAATGTATGTTATGGATTGCTCATCACCGGACATG
CTTTCCCAGTTCGAAATCCTGAAAAAGGAGTTAGATCTTTACAAAGCTGG
ACTGTCAACAATATCATCCATCTTCATAGCGAATAAAATCGATTTGATAC
AAGACCAAGACGAAATGAGAAATAACATACAACAACATGTAAACATGCCT
GTTGTCCCACTCTCTGCTAAATTCAATCAAAATATTGAAGAGTTGAAAAG
TCTTATATTGCAGAAAAGGAAATTTAAGCATACTAGCTAAGTGGGCTTTC
CGAATGCTGGTAAATCTTCTCTCCTCCATTGCATTTCACGTGCAACACCA
AAGATTGGAGATTACCCTTTCACAACATTGAAACCAAACATCGGTGTGAT
GAATTTAAAAGATGACTTGACTGTTTCAGGTCTTGGTAATGTCCATTTCA
AGTCACCTACAAGAGTGCGCCCAAGAGAGTTCACAGAGGGAGGAACAGGA
GAAGAAATATTTGTAGAGTTGGAACTGAAATCAATCGCTGATATTGGCTT
GATCCCCGTGGGTACTGTGATTACGAACTCAAATAGTGACAAAGAACTAG
CAGATTTAACGAGAAAGGGAGAAGCATATACAGTTGCCAAGGGTGGATCT
AAAGGGACCATAAAGGGGGGCCAGATGGTGGTGACGGAGGACGTGGAGCT
GATGTCATTTTCATTGCTGATGATGCTTACTCCCAACTTTCTCATCTGGA
GCATCAATACCGTGCTAAGAATGGAGGGAATGGTTCCAAGAAAAACAGGC
ATGGAAAGAATGGAGAACACATACATATACATGTAAAACATTTGTAGATT
GGAAGCGTATCTATATCAAGTCGGGTAATGGTGGGAATGGTTCAGCCTCA
TTTGTTCACTCAAGATGCTGATGTATTGCAGAAATCATCTATCACGGTTA
AAACTGTCAAATAAAGTTATAATTTCTTCATCTCAATGCGGATGTTCCAC
TCAAGTCTCCCCACCTTTAAAGAAGAAACGAAAACTAATATACGCTAAGG
TTGCTGATATCCCTGGCATAGTCAAGGGAGCCCACGAAAACGTTGGTCTT
GGACATGAATTCTTACGCCACGTTGAACGTTGCCATATGTTAATGTATGT
TATGGATTGCTCATCACCGGACATGCTTTCCCAGTTCGAAATCCTGAAAA
AGGAGTTAGATCTTTACAAAGCTGGACTGTCAACAATATCATCCATCTTC
ATAGCGAATAAAATCGATTTGATACAAGACCAAGACGAAATGAGAAATAA
CATACAACAACATGTAAACATGCCTGTTGTCCCACTCTCTGCTAAATTCA
ATCAAAATATTGAAGAGTTGAAAAGTCTTATATTGCAGAAAAGGAAATTT
AAGCATACTAGCTAAGTGGGCTTTCCGAATGCTGGTAAATCTTCTCTCCT
CCATTGCATTTCACGTGCAACACCAAAGATTGGAGATTACCCTTTCACAA
CATTGAAACCAAACATCGGTGTGATGAATTTAAAAGATGACTTGACTGTT
TCAGGTCTTGGTAATGTCCATTTCAAGTCACCTACAAGAGTGCGCCCAAG
AGAGTTCACAGAGGGAGGAACAGGAGAAGAAATATTTGTAGAGTTGGAAC
TGAAATCAATCGCTGATATTGGCTTGATCCCCGTGGGTACTGTGATTACG
AACTCAAATAGTGACAAAGAACTAGCAGATTTAACGAGAAAGGGAGAAGC
ATATACAGTTGCCAAGGGTGGATCTAAAGGGACCATAAAGGGGGGCCAGA
TGGTGGTGACGGAGGACGTGGAGCTGATGTCATTTTCATTGCTGATGATG
CTTACTCCCAACTTTCTCATCTGGAGCATCAATACCGTGCTAAGAATGGA
GGGAATGGTTCCAAGAAAAACAGGCATGGAAAGAATGGAGAACACATACA
TATACATGTAAAACATTTGTAGATTGGAAGCGTATCTATATCAAGTCGGG
TAATGGTGGGAATGGTTCAGCCTCATTTGTTCACTCAAGATGCTGATGTA
TTGCAGAAATCATCTATCACGGTTAAAACTGTCAAATAAAGTTATAATTT
CTTCATCTCAATGCGGATGTTCCACTCAAGTCTCCCCACCTTTAAAGAAG
AAACGAAAACTAATATACGCTAAGGTTGCTGATATCCCTGGCATAGTCAA
GGGAGCCCACGAAAACGTTGGTCTTGGACATGAATTCTTACGCCACGTTG
AACGTTGCCATATGTTAATGTATGTTATGGATTGCTCATCACCGGACATG
CTTTCCCAGTTCGAAATCCTGAAAAAGGAGTTAGATCTTTACAAAGCTGG
ACTGTCAACAATATCATCCATCTTCATAGCGAATAAAATCGATTTGATAC
AAGACCAAGACGAAATGAGAAATAACATACAACAACATGTAAACATGCCT
GTTGTCCCACTCTCTGCTAAATTCAATCAAAATATTGAAGAGTTGAAAAG
TCTTATATTGCAGAAAAGGAAATTTAAGCATACTAGCTAAGTGGGCTTTC
CGAATGCTGGTAAATCTTCTCTCCTCCATTGCATTTCACGTGCAACACCA
AAGATTGGAGATTACCCTTTCACAACATTGAAACCAAACATCGGTGTGAT
GAATTTAAAAGATGACTTGACTGTTTCAGGTCTTGGTAATGTCCATTTCA
AGTCACCTACAAGAGTGCGCCCAAGAGAGTTCACAGAGGGAGGAACAGGA
GAAGAAATATTTGTAGAGTTGGAACTGAAATCAATCGCTGATATTGGCTT
GATCCCCGTGGGTACTGTGATTACGAACTCAAATAGTGACAAAGAACTAG
CAGATTTAACGAGAAAGGGAGAAGCATATACAGTTGCCAAGGGTGGATCT
AAAGGGACCATAAAGGGGGGCCAGATGGTGGTGACGGAGGACGTGGAGCT
GATGTCATTTTCATTGCTGATGATGCTTACTCCCAACTTTCTCATCTGGA
GCATCAATACCGTGCTAAGAATGGAGGGAATGGTTCCAAGAAAAACAGGC
ATGGAAAGAATGGAGAACACATACATATACATGTAAAACATTTGTAGATT
GGAAGCGTATCTATATCAAGTCGGGTAATGGTGGGAATGGTTCAGCCTCA
TTTGTTCACTCAAGATGCTGATGTATTGCAGAAATCATCTATCACGGTTA
AAACTGTCAAATAAAGTTATAATTTCTTCATCTCAATGCGGATGTTCCAC
TCAAGTCTCCCCACCTTTAAAGAAGAAACGAAAACTAATATACGCTAAGG
TTGCTGATATCCCTGGCATAGTCAAGGGAGCCCACGAAAACGTTGGTCTT
GGACATGAATTCTTACGCCACGTTGAACGTTGCCATATGTTAATGTATGT
TATGGATTGCTCATCACCGGACATGCTTTCCCAGTTCGAAATCCTGAAAA
AGGAGTTAGATCTTTACAAAGCTGGACTGTCAACAATATCATCCATCTTC
ATAGCGAATAAAATCGATTTGATACAAGACCAAGACGAAATGAGAAATAA
CATACAACAACATGTAAACATGCCTGTTGTCCCACTCTCTGCTAAATTCA
ATCAAAATATTGAAGAGTTGAAAAGTCTTATATTGCAGAAAAGGAAATTT
AAGCATACTAGCTAAGTGGGCTTTCCGAATGCTGGTAAATCTTCTCTCCT
CCATTGCATTTCACGTGCAACACCAAAGATTGGAGATTACCCTTTCACAA
CATTGAAACCAAACATCGGTGTGATGAATTTAAAAGATGACTTGACTGTT
TCAGGTCTTGGTAATGTCCATTTCAAGTCACCTACAAGAGTGCGCCCAAG
AGAGTTCACAGAGGGAGGAACAGGAGAAGAAATATTTGTAGAGTTGGAAC
TGAAATCAATCGCTGATATTGGCTTGATCCCCGTGGGTACTGTGATTACG
AACTCAAATAGTGACAAAGAACTAGCAGATTTAACGAGAAAGGGAGAAGC
ATATACAGTTGCCAAGGGTGGATCTAAAGGGACCATAAAGGGGGGCCAGA
TGGTGGTGACGGAGGACGTGGAGCTGATGTCATTTTCATTGCTGATGATG
CTTACTCCCAACTTTCTCATCTGGAGCATCAATACCGTGCTAAGAATGGA
GGGAATGGTTCCAAGAAAAACAGGCATGGAAAGAATGGAGAACACATACA
TATACATGTAAAACATTTGTAGATTGGAAGCGTATCTATATCAAGTCGGG
TAATGGTGGGAATGGTTCAGCCTCATTTGTTCACTCAAGATGCTGATGTA
TTGCAGAAATCATCTATCACGGTTAAAACTGTCAAATAAAGTTATAATTT
CTTCATCTCAATGCGGATGTTCCACTCAAGTCTCCCCACCTTTAAAGAAG
AAACGAAAACTAATATACGCTAAGGTTGCTGATATCCCTGGCATAGTCAA
GGGAGCCCACGAAAACGTTGGTCTTGGACATGAATTCTTACGCCACGTTG
AACGTTGCCATATGTTAATGTATGTTATGGATTGCTCATCACCGGACATG
CTTTCCCAGTTCGAAATCCTGAAAAAGGAGTTAGATCTTTACAAAGCTGG
ACTGTCAACAATATCATCCATCTTCATAGCGAATAAAATCGATTTGATAC
AAGACCAAGACGAAATGAGAAATAACATACAACAACATGTAAACATGCCT
GTTGTCCCACTCTCTGCTAAATTCAATCAAAATATTGAAGAGTTGAAAAG
TCTTATATTGCAGAAAAGGAAATTTAAGCATACTAGCTAAGTGGGCTTTC
CGAATGCTGGTAAATCTTCTCTCCTCCATTGCATTTCACGTGCAACACCA
AAGATTGGAGATTACCCTTTCACAACATTGAAACCAAACATCGGTGTGAT
GAATTTAAAAGATGACTTGACTGTTTCAGGTCTTGGTAATGTCCATTTCA
AGTCACCTACAAGAGTGCGCCCAAGAGAGTTCACAGAGGGAGGAACAGGA
GAAGAAATATTTGTAGAGTTGGAACTGAAATCAATCGCTGATATTGGCTT
GATCCCCGTGGGTACTGTGATTACGAACTCAAATAGTGACAAAGAACTAG
CAGATTTAACGAGAAAGGGAGAAGCATATACAGTTGCCAAGGGTGGATCT
AAAGGGACCATAAAGGGGGGCCAGATGGTGGTGACGGAGGACGTGGAGCT
GATGTCATTTTCATTGCTGATGATGCTTACTCCCAACTTTCTCATCTGGA
GCATCAATACCGTGCTAAGAATGGAGGGAATGGTTCCAAGAAAAACAGGC
ATGGAAAGAATGGAGAACACATACATATACATGTAAAACATTTGTAGATT
GGAAGCGTATCTATATCAAGTCGGGTAATGGTGGGAATGGTTCAGCCTCA
TTTGTTCACTCAAGATGCTGATGTATTGCAGAAATCATCTATCACGGTTA
AAACTGTCAAATAAAGTTATAATTTCTTCATCTCAATGCGGATGTTCCAC
TCAAGTCTCCCCACCTTTAAAGAAGAAACGAAAACTAATATACGCTAAGG
TTGCTGATATCCCTGGCATAGTCAAGGGAGCCCACGAAAACGTTGGTCTT
GGACATGAATTCTTACGCCACGTTGAACGTTGCCATATGTTAATGTATGT
TATGGATTGCTCATCACCGGACATGCTTTCCCAGTTCGAAATCCTGAAAA
AGGAGTTAGATCTTTACAAAGCTGGACTGTCAACAATATCATCCATCTTC
ATAGCGAATAAAATCGATTTGATACAAGACCAAGACGAAATGAGAAATAA
CATACAACAACATGTAAACATGCCTGTTGTCCCACTCTCTGCTAAATTCA
ATCAAAATATTGAAGAGTTGAAAAGTCTTATATTGCAGAAAAGGAAATTT
AAGCATACTAGCTAAGTGGGCTTTCCGAATGCTGGTAAATCTTCTCTCCT
CCATTGCATTTCACGTGCAACACCAAAGATTGGAGATTACCCTTTCACAA
CATTGAAACCAAACATCGGTGTGATGAATTTAAAAGATGACTTGACTGTT
TCAGGTCTTGGTAATGTCCATTTCAAGTCACCTACAAGAGTGCGCCCAAG
AGAGTTCACAGAGGGAGGAACAGGAGAAGAAATATTTGTAGAGTTGGAAC
TGAAATCAATCGCTGATATTGGCTTGATCCCCGTGGGTACTGTGATTACG
AACTCAAATAGTGACAAAGAACTAGCAGATTTAACGAGAAAGGGAGAAGC
ATATACAGTTGCCAAGGGTGGATCTAAAGGGACCATAAAGGGGGGCCAGA
TGGTGGTGACGGAGGACGTGGAGCTGATGTCATTTTCATTGCTGATGATG
CTTACTCCCAACTTTCTCATCTGGAGCATCAATACCGTGCTAAGAATGGA
GGGAATGGTTCCAAGAAAAACAGGCATGGAAAGAATGGAGAACACATACA
TATACATGTAAAACATTTGTAGATTGGAAGCGTATCTATATCAAGTCGGG
TAATGGTGGGAATGGTTCAGCCTCATTTGTTCACTCAAGATGCTGATGTA
TTGCAGAAATCATCTATCACGGTTAAAACTGTCAAATAAAGTTATAATTT
CTTCATCTCAATGCGGATGTTCCACTCAAGTCTCCCCACCTTTAAAGAAG
AAACGAAAACTAATATACGCTAAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013697XLOC_013697Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024407-proteinTCONS_00024407-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024407-exon-sc0000491-1575043694:61278..61548TCONS_00024407-exon-sc0000491-1575043694:61278..61548Clytia hemisphaericaexon
TCONS_00024407-exon-sc0000491-1575043694:57897..57978TCONS_00024407-exon-sc0000491-1575043694:57897..57978Clytia hemisphaericaexon
TCONS_00024407-exon-sc0000491-1575043694:56744..56921TCONS_00024407-exon-sc0000491-1575043694:56744..56921Clytia hemisphaericaexon
TCONS_00024407-exon-sc0000491-1575043694:55873..55975TCONS_00024407-exon-sc0000491-1575043694:55873..55975Clytia hemisphaericaexon
TCONS_00024407-exon-sc0000491-1575043694:55476..55597TCONS_00024407-exon-sc0000491-1575043694:55476..55597Clytia hemisphaericaexon
TCONS_00024407-exon-sc0000491-1575043694:52874..53012TCONS_00024407-exon-sc0000491-1575043694:52874..53012Clytia hemisphaericaexon
TCONS_00024407-exon-sc0000491-1575043694:51610..52641TCONS_00024407-exon-sc0000491-1575043694:51610..52641Clytia hemisphaericaexon
TCONS_00024407-exon-sc0000491-1510915933:61278..61548TCONS_00024407-exon-sc0000491-1510915933:61278..61548Clytia hemisphaericaexon
TCONS_00024407-exon-sc0000491-1510915933:57897..57978TCONS_00024407-exon-sc0000491-1510915933:57897..57978Clytia hemisphaericaexon
TCONS_00024407-exon-sc0000491-1510915933:56744..56921TCONS_00024407-exon-sc0000491-1510915933:56744..56921Clytia hemisphaericaexon
TCONS_00024407-exon-sc0000491-1510915933:55873..55975TCONS_00024407-exon-sc0000491-1510915933:55873..55975Clytia hemisphaericaexon
TCONS_00024407-exon-sc0000491-1510915933:55476..55597TCONS_00024407-exon-sc0000491-1510915933:55476..55597Clytia hemisphaericaexon
TCONS_00024407-exon-sc0000491-1510915933:52874..53012TCONS_00024407-exon-sc0000491-1510915933:52874..53012Clytia hemisphaericaexon
TCONS_00024407-exon-sc0000491-1510915933:51610..52641TCONS_00024407-exon-sc0000491-1510915933:51610..52641Clytia hemisphaericaexon
TCONS_00024407-exon-sc0000491-1491911889:61278..61548TCONS_00024407-exon-sc0000491-1491911889:61278..61548Clytia hemisphaericaexon
TCONS_00024407-exon-sc0000491-1491911889:57897..57978TCONS_00024407-exon-sc0000491-1491911889:57897..57978Clytia hemisphaericaexon
TCONS_00024407-exon-sc0000491-1491911889:56744..56921TCONS_00024407-exon-sc0000491-1491911889:56744..56921Clytia hemisphaericaexon
TCONS_00024407-exon-sc0000491-1491911889:55873..55975TCONS_00024407-exon-sc0000491-1491911889:55873..55975Clytia hemisphaericaexon
TCONS_00024407-exon-sc0000491-1491911889:55476..55597TCONS_00024407-exon-sc0000491-1491911889:55476..55597Clytia hemisphaericaexon
TCONS_00024407-exon-sc0000491-1491911889:52874..53012TCONS_00024407-exon-sc0000491-1491911889:52874..53012Clytia hemisphaericaexon
TCONS_00024407-exon-sc0000491-1491911889:51610..52641TCONS_00024407-exon-sc0000491-1491911889:51610..52641Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000491supercontigsc0000491:51610..61548 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.62328	1.94321	1.15667	0	2.23085	0.305213	1.14962	1.98934	0	2.43876e-10	0.000153158	0.000346484	0.394069	0.426568	1.55941	1.61766	1.60135	1.63728	0.426928	0.606238	2.20842	1.83966	4.63461	6.4589	0	0	1.25464	2.59945	0.763325	3.10743
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006073GTP_binding_domain
IPR005225Small_GTP-bd_dom
IPR006169GTP1_OBG_dom
IPR014100GTP-bd_Obg/CgtA
IPR035101GTP-bd_Obg
IPR031167G_OBG
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
GO:0000287magnesium ion binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0000287 magnesium ion binding
Blast
[Close]
BLAST of TCONS_00024407 vs. Swiss-Prot (Human)
Match: MTG2 (Mitochondrial ribosome-associated GTPase 2 OS=Homo sapiens GN=MTG2 PE=1 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 4.064e-64
Identity = 130/316 (41.14%), Postives = 194/316 (61.39%), Query Frame = 1 
Query:  274 KTFVDWKRIYIKSGNGGNGSASFVHSRDHKXXXXXXXXXXXXX--VIFIADDAYSQLSHLEHQYRAKNGGNGSKKNRHGKNGEHIHIHIPVGTVITNSNSDKELADLTRKGEAYTVAKGGSKGLGNVHFKSPTRVRPREFXXXXXXXXIFVELELKSIADIGLVGFPNAGKSSLLHCISRATPKIGDYPFTTLKPNIGVMNLKDDLTVSVADIPGIVKGAHENVGLGHEFLRHVERCHMLMYVMDCSSPDMLSQFEILKKELDLYKAGLSTISSIFIANKIDLIQDQDEMRNNIQQHVNMPVVPLSAKFNQNIEEL 1215
            + FVD++R+ +  GNGG G++ F HS   K       G  G    VI   D     LS +  +Y+  +G +G  KN  G++G  ++I +PVGT++      + +ADL+  G+ Y  A GG+ G GN  F +     P   T G  G++  + LELK++A  G+VGFPNAGKSSLL  IS A P +  YPFTTLKP++G+++ +  L ++VADIPGI++GAH+N GLG  FLRH+ERC  L++V+D S P+  +Q + LK EL++Y+ GLS      +ANKIDL + Q  + + ++ H+   V+ LSA   +N+E+L
Sbjct:   70 RYFVDYRRVLVCGGNGGAGASCF-HSEPRKEFGGPDGGDGGNGGHVILRVDQQVKSLSSVLSRYQGFSGEDGGSKNCFGRSGAVLYIRVPVGTLVKEGG--RVVADLSCVGDEYIAALGGAGGKGNRFFLANNNRAPVTCTPGQPGQQRVLHLELKTVAHAGMVGFPNAGKSSLLRAISNARPAVASYPFTTLKPHVGIVHYEGHLQIAVADIPGIIRGAHQNRGLGSAFLRHIERCRFLLFVVDLSQPEPWTQVDDLKYELEMYEKGLSARPHAIVANKIDLPEAQANL-SQLRDHLGQEVIVLSALTGENLEQL 381
The following BLAST results are available for this feature:
BLAST of TCONS_00024407 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MTG24.064e-6441.14Mitochondrial ribosome-associated GTPase 2 OS=Homo... [more]
back to top