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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024436 ID=TCONS_00024436|Name=TCONS_00024436|organism=Clytia hemisphaerica|type=transcript|length=5658bp
gaaaggcgaaaaggtctattggaaaTTATGGAAAttatacacctttcccg
taaatttccttagggaaagttggtttttgaGCTTCTGTtgaacaaaatcc
cctcaataaatttttgtatgttcaatctattcaggATATTATATTGATTA
TATcaccctgaaaatcttttgtcaaaagaagatcgctatcaaaagttaga
agctgaaaaccctCTTTCCCTAACAACTTGCAGGAAAAACGCGTGcacac
attttcccgggccatttctgacaagtttgaattacaggaaaggtgtattc
ctctacatgaaaaaagggcaatctcaatctcaaatgGCCATTCAATTTAG
ATTAAATTATCAATTAATGAGGTCTTTCGTGGTTTGTCAAAAAGGCCTAT
TTGGCAATGGGCTCATGGTATGACCCAAGCATACTAATAAATATTTCCCC
AGATTTGGGTCATGTTCAGGACCAAAATAGCAAATCATTATTTTGGTTTG
AATAATGATGTTATTAAAGATTATATTCAACATGATGTCATATCGTAAgc
tggtctaatgttgacatccctcattTAAAATACAACACCTCTTTTAGAGA
TAGGAAAAATAGGAAGGgcaaaatcactgatttttatcACTTACCTCTAA
GCAaagaaagaaagtttcaatCAGGACCCTGACCTTCCCATTAATCTCAG
CTCTAAAGATGGGTGTCGGAATGAAAAGAGAGATGTCagtattagaccaa
cttatggtatcCTACAAAAGGTTTATCGTCAAAGTTTCAAACTTTAATAA
AGAATCTCGAATatctaaataaatctaaaaactaaaatatttgaaTGATT
TCAGAAAATGATAAGAATAGCCAATCAACTTAGGCTACAAGCACTACAAC
CTTTTTATTGCTCAGCACGATTATCATCTACTGCAGTTGAATACACNCAA
GCACTACAACCTATTTATTGCTTAGCACGATTATCATCTACTGCAGTTGA
ATACACAATTAGACCAGAAAGAGTCGAGGAAATTTCCAAATCTCCAAGTG
GATGGGTTCCAAGAGCTACTCCACCACCAGAACTCCCTTTCGATATTCAA
AGATCCAAAACGAACAATATTCCAGTTTATGTCAAGTATTCTAATGGGAG
ATCAAAAGTTGTAACAAGTATTCGCAAAGTTCGAGGAGACATAAAAGCAC
TGGAACATTGTGTAAGACAGCGACTTGGGAATGAAAACCATTATCAGATC
AATGAACTAACAAACCAACTGCACGTGAAAGGAAATCATAGAGACAAATT
AGTTCTGTTACTTAAAGAACTAGGTTTCTAATTTGAAAAGTATCAATTTG
TGTTAagtcaattttgtattttcttcacCCTTGTAAAATAGTGAAATTAT
AATCATTAACTATAAACCACTTTTAATAGTTATCTTTTGCAAATTCtgtt
aatttattttattcacTTGATTTGAAACATTTCTTGGACAAAATTGCTAA
ACCAACATAAATATTGGATAATTGCTAATTTAATATTTAGCAGAATAGTT
TTTGCTATATGTATTTTCCTGAATCTAAAGTAAAACAACATTCCATTTAG
CCAcattaaattatgaaaaaaagctTCGACATTtgcaatttttgaaagaa
aaagaataatCTTAATAGTGTTATCAGTTATttgatttaatttattttta
ttccctTTTAGAAATGCTATTAAACAAAACTAGATTGCTTTTGAGACCAG
TACTTTCAACCATACCCTGTAGAGGTGTAAAAGCAAAAGCACCTAGAGTA
AAACTTGGACCTTTCAAATATGTCCCTCCGCCTGATCAATTCCCATGTCT
TGTAAGACAGGAATCAATCTTAAAATCTTTAGTATTAGAGAACCCTGAAT
ATCCTATCAGCCTAAATCGCTTGGATGAGATAAGAGACACTCCTGGTGGT
TGGCTGCCAAGAAAGGTACCTCCACCAGAATTACCATTTGAATGCAAAAG
GGCTGCAAGACGTTTTGAAATCACAACAAACACTAAGAAATGGAAAGGGA
AAGTTGTTGTTTACACTTCAGTGCATAATGTGAAAGGTGACTTGGAAGCG
TTTCGAGACTGCTTGAAATGGCGACTTGGTGAAGATACTCCAATGAAGAT
ATTTAACGATAAAACTGTGGTCGTGGTTGGTTATCATGTGAAAGAAATTT
CAATGTTATTATTAGGATTAGGTTTTTGAGCTAATTCTTTTTTTTGCCGT
ACTAGACAAATGAATGAATTTCTTGATAAGAAACTTTTTACATATTTCAG
ACATGATTTTGATAACTTATCTAATCCTATACCATTTTGTCAGCATTAAA
ATAGATGAAACATGTTATATCTTAGTGAACTGAACACTTCCAAATggatt
aaaatttcaattttgtacACATTTTTGTTAGTATGAAAACAATTGACTTT
AacaaggtttttttttcaaagttatattttttcgataaattatCTCTGCG
TACCAAGATAAGTTCCATTTGATTCTATTTATTGTCTGTGGTTTTGTTTT
GTGAATGTTAATTTAGTATTGATAACATAAATATTGTCTCACCTTTGTTA
TTTTGTCTCATCTTTTGTTACTTTTAATTAAATCTGTTCTTTTAGATATC
Tgtcacaaacaaacaaaaaattaaattcaaaaaatattaaaaaaataaat
acaaatcGAAAAAATGGGAAGGAAGCTGAAATATCATgaacaaaaattat
tgaaaaaagtcGACTTTATACAATGGAAGAAAGATGATACCATTCGTGAA
AACAAAATCCTGAGAAAATACCACATTCAAAAGCGAGAAGATTACACCAA
ATATAACCGTCTTTCTGGAGCTATTCATCAATTGATCACAAAGATTAAAG
ATTTGGATCCAAAAGATCCTTTCCGGCATGAATCAACTGATAAACTATTA
CTGAAGCTCTATAATATGGGCCTTATACATGATAAAAAGGACTTTAGTCT
GACAGACAAAATAACCTCCTCATCTTTCTGTAGACGTCGTTTACCTGTTG
TCATGGTGAGATTGAGAATGGcccaacaaatcaaaatggctGTGCAATAC
GTTGAACAAGGCCATGTTCGAGTTGGTCCAGAAGTTGTCACCGATCCTGC
ATTTTTGGTTGTACGCAATATGGAAGATTACATCACTTGGGTAGATTCAT
CCAAAATCAAACAACATATTATGGAATACAATGACGAAAGAGATGACTTT
GAAACAttataatttattaatttttacgtCCTTTCATAAAGAAATCTATT
TTCCTTTAAATTCCAATGTTAAcgtaatatttaatatttttttttgtctt
aacatttaatttttttccaaatgatTCTTAATTTGTTTGGGAAAGTTCCA
ATATAATATGCAATTTGTGTTTAGTTTtgtaaacattttaaaacattttc
aatttttttactggTGTAATTTCTATAGGTGGTCGATAAATAAATCCTAA
ACTTGTAAATCCTCCCAAAATTTATGCATTTCTCAATTATATGTAAGGTT
TTTTATAACCACTTTTATACTTTTCATAGTCTGTTTTTTATCAATTTGAG
TTCTGCTCTGATTTTgttcaacaaaacatttttattaattttttttccta
taGAAAAAAATCCAACGTATCATGTCTAAGAAATCTTCAGGAGGTAGCCC
AAATTGCTGGACAACATCTGGTTTGAGTTTTTCTGATAAGAATGCAAAAG
CAGAATTTGGTCTCACTGATGCAATGATTGAGGAAGGTATCAAAGAAGGA
AAACTTCAGGCTCGCAGGGGTGTATTATTTGGAAAGCCatatttgaaact
tttgaaacaaGAAGTTATGGCTTTTGCTAAAGAACGTCTTGGTGAAACTT
ACGATATTGATGAGATGAAAAAGAGACTGAATGGAATCAGGAGACAAATT
GACGATAATGAtcacaaaattaacaaaatgctTGAAAAGCAGATTGAGCT
CGAaagggaagaaaaaaaacttgttcACGCATTAGGGGAAAATGCTCCGC
CAAAGAGACGTTTTGGACCATCACTGAATTATGGTAACAGAATGCCATGC
ACAATgtgaataaaaacaaaccactttttttgcatcagtgtgcacaGAAA
ATTTGGCTCATCTGAGAAAAGATTAAATACGACACTGTAAAAGATGAAAC
CTTTAATAATCACctagccaatttttttttacaatgttGGACAATTTTAA
TGAATACAATGGGTTTGGAGCTGAGATTCAAGTAATATCAAGGTTGTTGC
TGGGCGAGATACTGATTTTATATACACAAAAAGCTCCTCCGAcagtttta
tacttttttttttctttgatatcATTTGTTTGGTAAGGATTTTGTAAATA
TTAAAGATATCCATTTTACGAgcctttttatcatttttgttaaTAATTTT
TAACCAGAGTAGAAAGTATTTAAACCTtatttatttgataattttgattg
aATCAGATTTCATTCTGAGGTTGGAAGTgtctgagaaaaataaatagaaa
ttaTTAGAAATGTTAAATCTCTGTCTCTCTTTATTTTAGTGTATCTCCTC
AATtgtatttcttcattttcctgcatattcaaagtttatttttctttaaa
aaattaaacttcttattattttttttgacagGAGAAAAACTATAAGAATT
TAACTCAAAAAATAAACCACACCGCCATGCCTAAAGCACGAAGCATGTTC
TGTGGAGGTAGTAACAGTGTTTGGAACTCTGCTGGAGCAACCATGAGCGA
TAAAAATGCGAAATTAGAGTTTCCTGGTTTGACTGATGACCTTATCCAAG
AAGGTTTGAGCACTGGAAAGTTACAAGGTCGTCGGCAAAGTACTTTCGGA
AATTGCTACATAAAGCTTGTTAGATCAGAGGTGCGAGCATTTGCTAGAGA
AAAACTCGGCGATGTGTTTGAGCTGgaggagaaaaagaaaaagctgaAAA
GGTTACGAAGTGAAATTGCTGATCtcaataaaatgataaaacaaaagGAA
GAATTGGAGATCGAAGAGCAGAAGCTTGTCGAAGAACTAGGCGAGAACGC
CCCTCCTAAGAGAGGAGGTGTACGAGGCAGAGGGCGTGGCCGTGGACGTG
GCCGTGGAAGAGGAGCATGTAAGATGTGATTTTAGTCTTGTTCTCAAATG
GAGAAATAAGATTTTTTAGATCTTACACATTTTTTAACCTACTCTCGCCT
CGGTtacctaataagcgtcccccgctaatcaatttttcgaaagattttcc
ACTCAGGACATTCCTATCCCAGGGGctccccgcttattaattttttggaa
aatgttttggATGTTCCCTCTTTTGCTTTAATTcggctgtattagcctcc
ttttcataaattttccacccaggacattcttattccatccTCCTCGCTTA
TTCCAACCTCCTCCCGTTCATTAGGCACCCGAGCGTACATTTTAAATACT
TTCATGTAAATTTCATGTAAACTTTCTTGTAAATACTTTTTAAActgtaa
atattttcaaaaagagtAGAGTATATTCACGATTTTATACGTAGGTAAAg
atgatatttttatttgaagtaTAGATTAGATGTATGATATATTTATGGAA
AGATTTTA Run BLAST on NCBI transcript from alignment at sc0000492:193215..200035- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024436 ID=TCONS_00024436|Name=TCONS_00024436|organism=Clytia hemisphaerica|type=transcript|length=6821bp|location=Sequence derived from alignment at sc0000492:193215..200035- (Clytia hemisphaerica)
GAAAGGCGAAAAGGTCTATTGGAAATTATGGAAATTATACACCTTTCCCG
TAAATTTCCTTAGGGAAAGTTGGTTTTTGAGCTTCTGTTGAACAAAATCC
CCTCAATAAATTTTTGTATGTTCAATCTATTCAGGATATTATATTGATTA
TATCACCCTGAAAATCTTTTGTCAAAAGAAGATCGCTATCAAAAGTTAGA
AGCTGAAAACCCTCTTTCCCTAACAACTTGCAGGAAAAACGCGTGCACAC
ATTTTCCCGGGCCATTTCTGACAAGTTTGAATTACAGGAAAGGTGTATTC
CTCTACATGAAAAAAGGGCAATCTCAATCTCAAATGGCCATTCAATTTAG
ATTAAATTATCAATTAATGAGGTCTTTCGTGGTTTGTCAAAAAGGCCTAT
TTGGCAATGGGCTCATGGTATGACCCAAGCATACTAATAAATATTTCCCC
AGATTTGGGTCATGTTCAGGACCAAAATAGCAAATCATTATTTTGGTTTG
AATAATGATGTTATTAAAGATTATATTCAACATGATGTCATATCGTAAGC
TGGTCTAATGTTGACATCCCTCATTTAAAATACAACACCTCTTTTAGAGA
TAGGAAAAATAGGAAGGGCAAAATCACTGATTTTTATCACTTACCTCTAA
GCAAAGAAAGAAAGTTTCAATCAGGACCCTGACCTTCCCATTAATCTCAG
CTCTAAAGATGGGTGTCGGAATGAAAAGAGAGATGTCAGTATTAGACCAA
CTTATGGTATCCTACAAAAGGTTTATCGTCAAAGTTTCAAACTTTAATAA
AGAATCTCGAATATCTAAATAAATCTAAAAACTAAAATATTTGAATGATT
TCAGAAAATGATAAGAATAGCCAATCAACTTAGGCTACAAGCACTACAAC
CTTTTTATTGCTCAGCACGATTATCATCTACTGCAGTTGAATACACNCAA
GCACTACAACCTATTTATTGCTTAGCACGATTATCATCTACTGCAGTTGA
ATACACAATTAGACCAGAAAGAGTCGAGGAAATTTCCAAATCTCCAAGTG
GATGGGTTCCAAGAGCTACTCCACCACCAGAACTCCCTTTCGATATTCAA
AGATCCAAAACGAACAATATTCCAGTTTATGTCAAGTATTCTAATGGGAG
ATCAAAAGTTGTAACAAGTATTCGCAAAGTTCGAGGAGACATAAAAGCAC
TGGAACATTGTGTAAGACAGCGACTTGGGAATGAAAACCATTATCAGATC
AATGAACTAACAAACCAACTGCACGTGAAAGGAAATCATAGAGACAAATT
AGTTCTGTTACTTAAAGAACTAGGTTTCTAATTTGAAAAGTATCAATTTG
TGTTAAGTCAATTTTGTATTTTCTTCACCCTTGTAAAATAGTGAAATTAT
AATCATTAACTATAAACCACTTTTAATAGTTATCTTTTGCAAATTCTGTT
AATTTATTTTATTCACTTGATTTGAAACATTTCTTGGACAAAATTGCTAA
ACCAACATAAATATTGGATAATTGCTAATTTAATATTTAGCAGAATAGTT
TTTGCTATATGTATTTTCCTGAATCTAAAGTAAAACAACATTCCATTTAG
CCACATTAAATTATGAAAAAAAGCTTCGACATTTGCAATTTTTGAAAGAA
AAAGAATAATCTTAATAGTGTTATCAGTTATTTGATTTAATTTATTTTTA
TTCCCTTTTAGAAATGCTATTAAACAAAACTAGATTGCTTTTGAGACCAG
TACTTTCAACCATACCCTGTAGAGGTGTAAAAGCAAAAGCACCTAGAGTA
AAACTTGGACCTTTCAAATATGTCCCTCCGCCTGATCAATTCCCATGTCT
TGTAAGACAGGAATCAATCTTAAAATCTTTAGTATTAGAGAACCCTGAAT
ATCCTATCAGCCTAAATCGCTTGGATGAGATAAGAGACACTCCTGGTGGT
TGGCTGCCAAGAAAGGTACCTCCACCAGAATTACCATTTGAATGCAAAAG
GGCTGCAAGACGTTTTGAAATCACAACAAACACTAAGAAATGGAAAGGGA
AAGTTGTTGTTTACACTTCAGTGCATAATGTGAAAGGTGACTTGGAAGCG
TTTCGAGACTGCTTGAAATGGCGACTTGGTGAAGATACTCCAATGAAGAT
ATTTAACGATAAAACTGTGGTCGTGGTTGGTTATCATGTGAAAGAAATTT
CAATGTTATTATTAGGATTAGGTTTTTGAGCTAATTCTTTTTTTTGCCGT
ACTAGACAAATGAATGAATTTCTTGATAAGAAACTTTTTACATATTTCAG
ACATGATTTTGATAACTTATCTAATCCTATACCATTTTGTCAGCATTAAA
ATAGATGAAACATGTTATATCTTAGTGAACTGAACACTTCCAAATGGATT
AAAATTTCAATTTTGTACACATTTTTGTTAGTATGAAAACAATTGACTTT
AACAAGGTTTTTTTTTCAAAGTTATATTTTTTCGATAAATTATCTCTGCG
TACCAAGATAAGTTCCATTTGATTCTATTTATTGTCTGTGGTTTTGTTTT
GTGAATGTTAATTTAGTATTGATAACATAAATATTGTCTCACCTTTGTTA
TTTTGTCTCATCTTTTGTTACTTTTAATTAAATCTGTTCTTTTAGATATC
TGTCACAAACAAACAAAAAATTAAATTCAAAAAATATTAAAAAAATAAAT
ACAAATCGAAAAAATGGGAAGGAAGCTGAAATATCATGAACAAAAATTAT
TGAAAAAAGTCGACTTTATACAATGGAAGAAAGATGATACCATTCGTGAA
AACAAAATCCTGAGAAAATACCACATTCAAAAGCGAGAAGATTACACCAA
ATATAACCGTCTTTCTGGAGCTATTCATCAATTGATCACAAAGATTAAAG
ATTTGGATCCAAAAGATCCTTTCCGGCATGAATCAACTGATAAACTATTA
CTGAAGCTCTATAATATGGGCCTTATACATGATAAAAAGGACTTTAGTCT
GACAGACAAAATAACCTCCTCATCTTTCTGTAGACGTCGTTTACCTGTTG
TCATGGTGAGATTGAGAATGGCCCAACAAATCAAAATGGCTGTGCAATAC
GTTGAACAAGGCCATGTTCGAGTTGGTCCAGAAGTTGTCACCGATCCTGC
ATTTTTGGTTGTACGCAATATGGAAGATTACATCACTTGGGTAGATTCAT
CCAAAATCAAACAACATATTATGGAATACAATGACGAAAGAGATGACTTT
GAAACATTATAATTTATTAATTTTTACGTCCTTTCATAAAGAAATCTATT
TTCCTTTAAATTCCAATGTTAACGTAATATTTAATATTTTTTTTTGTCTT
AACATTTAATTTTTTTCCAAATGATTCTTAATTTGTTTGGGAAAGTTCCA
ATATAATATGCAATTTGTGTTTAGTTTTGTAAACATTTTAAAACATTTTC
AATTTTTTTACTGGTGTAATTTCTATAGGTGGTCGATAAATAAATCCTAA
ACTTGTAAATCCTCCCAAAATTTATGCATTTCTCAATTATATGTAAGGTT
TTTTATAACCACTTTTATACTTTTCATAGTCTGTTTTTTATCAATTTGAG
TTCTGCTCTGATTTTGTTCAACAAAACATTTTTATTAATTTTTTTTCCTA
TAGAAAAAAATCCAACGTATCATGTCTAAGAAATCTTCAGGAGGTAGCCC
AAATTGCTGGACAACATCTGGTTTGAGTTTTTCTGATAAGAATGCAAAAG
CAGAATTTGGTCTCACTGATGCAATGATTGAGGAAGGTATCAAAGAAGGA
AAACTTCAGGTACATACAAGCCATTTATGATTGTCAAACAGTATAACATG
AAGATGATGCAAATATCAAGTAATGTGACAAAAGGGTAATTTTCTCAGAA
TTTCTGATTACCTTTTTCTGAAAATCTATGTTTGTTGGTTGTAATAAAAA
ACTCATGTCACTTTGCATAGTTCACTTTCAAGGACACAAAAATAATATTT
TATTTCTCACTCAATCTAGGCTCGCAGGGGTGTATTATTTGGAAAGCCAT
ATTTGAAACTTTTGAAACAAGAAGTTATGGCTTTTGCTAAAGAACGTCTT
GGTGAAACTTACGATATTGATGAGATGAAAAAGAGACTGAATGGAATCAG
GAGACAAATTGACGATAATGATCACAAAATTAACAAAATGCTTGAAAAGC
AGGTTTGAATTGATAAATTTTGCTTGTTTAAAAATCTAAGTTTGTCTCTG
ATTATTCAACAAAGCCCTTATCAGGATTGATGATGTGTTTAAAGTTCTTC
TGACTTGGCGCTTCCAAAGAAAGTGAAAAGATATACCATTTTAGTCTCCA
TGCTAAGCAGAAGTTTAAAGAGTCGGAGATAATTATTGTGTATATAAAGC
ATTTCTTACATTTCATTTACTTTTTAGATTGAGCTCGAAAGGGAAGAAAA
AAAACTTGTTCACGCATTAGGGGAAAATGCTCCGCCAAAGAGACGTTTTG
GACCATCACTGAATTATGGTAACAGAATGCCATGCACAATGTGAATAAAA
ACAAACCACTTTTTTTGCATCAGTGTGCACAGAAAATTTGGCTCATCTGA
GAAAAGATTAAATACGACACTGTAAAAGATGAAACCTTTAATAATCACCT
AGCCAATTTTTTTTTACAATGTTGGACAATTTTAATGAATACAATGGGTT
TGGAGCTGAGATTCAAGTAATATCAAGGTTGTTGCTGGGCGAGATACTGA
TTTTATATACACAAAAAGCTCCTCCGACAGTTTTATACTTTTTTTTTTCT
TTGATATCATTTGTTTGGTAAGGATTTTGTAAATATTAAAGATATCCATT
TTACGAGCCTTTTTATCATTTTTGTTAATAATTTTTAACCAGAGTAGAAA
GTATTTAAACCTTATTTATTTGATAATTTTGATTGAATCAGATTTCATTC
TGAGGTTGGAAGTGTCTGAGAAAAATAAATAGAAATTATTAGAAATGTTA
AATCTCTGTCTCTCTTTATTTTAGTGTATCTCCTCAATTGTATTTCTTCA
TTTTCCTGCATATTCAAAGTTTATTTTTCTTTAAAAAATTAAACTTCTTA
TTATTTTTTTTGACAGGAGAAAAACTATAAGAATTTAACTCAAAAAATAA
ACCACACCGCCATGCCTAAAGCACGAAGCATGTTCTGTGGAGGTAGTAAC
AGTGTTTGGAACTCTGCTGGAGCAACCATGAGCGATAAAAATGCGAAATT
AGAGTTTCCTGGTTTGACTGATGACCTTATCCAAGAAGGTTTGAGCACTG
GAAAGTTACAAGTGAGTGGATGTTGTTGTTTTTTTTCTGAACCCTATTGT
TGTAAGGCTTTTAGATACAGCCTTTTCCTAACTTGTATTTCTCTTCACAT
TTCCGAATTTTTTTTTACCTTAGCCTCAAAATTATATGATGGCAGACTTT
TAGCAATGCTTGAATAAGACCCTTGATTATGTACCTCAGTATCAGTATTT
TTGATAATGTTTCAGGGTCGTCGGCAAAGTACTTTCGGAAATTGCTACAT
AAAGCTTGTTAGATCAGAGGTGCGAGCATTTGCTAGAGAAAAACTCGGCG
ATGTGTTTGAGCTGGAGGAGAAAAAGAAAAAGCTGAAAAGGTTACGAAGT
GAAATTGCTGATCTCAATAAAATGATAAAACAAAAGGTTAGAAGTTTATT
TGTTCTTTCTACTCAAAAGTCCTTTCTATACCCACAAACGCGAACAGCAA
ATGACCAGCTTTCAATCCGGACACAAAGATTTCTTTATGGCCTCTGGATA
ATCTGAGAAACTACATAAGGGGATTTTATTTTCCAGATTTCAGTTTAAAA
ACAATCTGAACTGCCTGAACTCTTCGAACTCATACATTCCTCGCCTATTC
AGTTCAACTAAAATTCGACTTGAAGAAGAAGTACTAAGAAAACTAGTAAT
TTAGCTAAAATACACTGAGGTTAAAAAAAAACTGAATTATTCACCTATTT
TTTAAGGACAATAAAATATCTACAAGGGTTTTACATATGAACTTTATGCC
CCCCTTGTCCAGTCGTGACTTCTCTTTGTTACACTCCTCCCTCCGCCAAT
GTGCAAAGTCATCTTCTAATCACCCGCCTCGAATGAGATGGGTACGTTTT
TCATTTAACGCGTTAATGTTTTTTGGAATTTTGATACAAGTTTGAATTCT
AATTTTTTAGGAAGAATTGGAGATCGAAGAGCAGAAGCTTGTCGAAGAAC
TAGGCGAGAACGCCCCTCCTAAGAGAGGAGGTGTACGAGGCAGAGGGCGT
GGCCGTGGACGTGGCCGTGGAAGAGGAGCATGTAAGATGTGATTTTAGTC
TTGTTCTCAAATGGAGAAATAAGATTTTTTAGATCTTACACATTTTTTAA
CCTACTCTCGCCTCGGTTACCTAATAAGCGTCCCCCGCTAATCAATTTTT
CGAAAGATTTTCCACTCAGGACATTCCTATCCCAGGGGCTCCCCGCTTAT
TAATTTTTTGGAAAATGTTTTGGATGTTCCCTCTTTTGCTTTAATTCGGC
TGTATTAGCCTCCTTTTCATAAATTTTCCACCCAGGACATTCTTATTCCA
TCCTCCTCGCTTATTCCAACCTCCTCCCGTTCATTAGGCACCCGAGCGTA
CATTTTAAATACTTTCATGTAAATTTCATGTAAACTTTCTTGTAAATACT
TTTTAAACTGTAAATATTTTCAAAAAGAGTAGAGTATATTCACGATTTTA
TACGTAGGTAAAGATGATATTTTTATTTGAAGTATAGATTAGATGTATGA
TATATTTATGGAAAGATTTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024436-exon-sc0000492-1575043694:196227..200035 | TCONS_00024436-exon-sc0000492-1575043694:196227..200035 | Clytia hemisphaerica | exon |
| TCONS_00024436-exon-sc0000492-1575043694:195834..196016 | TCONS_00024436-exon-sc0000492-1575043694:195834..196016 | Clytia hemisphaerica | exon |
| TCONS_00024436-exon-sc0000492-1575043694:194725..195608 | TCONS_00024436-exon-sc0000492-1575043694:194725..195608 | Clytia hemisphaerica | exon |
| TCONS_00024436-exon-sc0000492-1575043694:194350..194520 | TCONS_00024436-exon-sc0000492-1575043694:194350..194520 | Clytia hemisphaerica | exon |
| TCONS_00024436-exon-sc0000492-1575043694:193215..193825 | TCONS_00024436-exon-sc0000492-1575043694:193215..193825 | Clytia hemisphaerica | exon |
| TCONS_00024436-exon-sc0000492-1510915933:196227..200035 | TCONS_00024436-exon-sc0000492-1510915933:196227..200035 | Clytia hemisphaerica | exon |
| TCONS_00024436-exon-sc0000492-1510915933:195834..196016 | TCONS_00024436-exon-sc0000492-1510915933:195834..196016 | Clytia hemisphaerica | exon |
| TCONS_00024436-exon-sc0000492-1510915933:194725..195608 | TCONS_00024436-exon-sc0000492-1510915933:194725..195608 | Clytia hemisphaerica | exon |
| TCONS_00024436-exon-sc0000492-1510915933:194350..194520 | TCONS_00024436-exon-sc0000492-1510915933:194350..194520 | Clytia hemisphaerica | exon |
| TCONS_00024436-exon-sc0000492-1510915933:193215..193825 | TCONS_00024436-exon-sc0000492-1510915933:193215..193825 | Clytia hemisphaerica | exon |
| TCONS_00024436-exon-sc0000492-1491911889:196227..200035 | TCONS_00024436-exon-sc0000492-1491911889:196227..200035 | Clytia hemisphaerica | exon |
| TCONS_00024436-exon-sc0000492-1491911889:195834..196016 | TCONS_00024436-exon-sc0000492-1491911889:195834..196016 | Clytia hemisphaerica | exon |
| TCONS_00024436-exon-sc0000492-1491911889:194725..195608 | TCONS_00024436-exon-sc0000492-1491911889:194725..195608 | Clytia hemisphaerica | exon |
| TCONS_00024436-exon-sc0000492-1491911889:194350..194520 | TCONS_00024436-exon-sc0000492-1491911889:194350..194520 | Clytia hemisphaerica | exon |
| TCONS_00024436-exon-sc0000492-1491911889:193215..193825 | TCONS_00024436-exon-sc0000492-1491911889:193215..193825 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000492 | supercontig | sc0000492:193215..200035 - |
Blast
BLAST of TCONS_00024436 vs. Swiss-Prot (Human)
Match: IMP3 (U3 small nucleolar ribonucleoprotein protein IMP3 OS=Homo sapiens GN=IMP3 PE=1 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 1.245e-56 Identity = 106/181 (58.56%), Postives = 146/181 (80.66%), Query Frame = 2
Query: 2714 MGRKLKYHEQKLLKKVDFIQWK-KDDTIRENKILRKYHIQKREDYTKYNRLSGAIHQLITKIKDLDPKDPFRHESTDKLLLKLYNMGLIHDKKDFSLTDKITSSSFCXXXXXXXXXXXXXAQQIKMAVQYVEQGHVRVGPEVVTDPAFLVVRNMEDYITWVDSSKIKQHIMEYNDERDDFE 3253
M RKLK+HEQKLLK+VDF+ W+ D + E ++LR+Y +Q+REDYT+YN+LS A+ +L +++DL +D FR ++ LL KLY +GL+ + L D +T+SSFCRRRLP V+++LRMAQ ++ AV +VEQGHVRVGP+VVTDPAFLV R+MED++TWVDSSKIK+H++EYN+ERDDF+
Sbjct: 1 MVRKLKFHEQKLLKQVDFLNWEVTDHNLHELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLVPTRGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRSMEDFVTWVDSSKIKRHVLEYNEERDDFD 181
The following BLAST results are available for this feature:
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