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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024452 ID=TCONS_00024452|Name=TCONS_00024452|organism=Clytia hemisphaerica|type=transcript|length=1719bp
GTAAACTTTGATAGATGGCCGGATTGAGAAACATCTAATATTTTAATGTT
TAAAGGTGATAAAAACGGAAACATAAATAATCGTTATTTTATCTTGAAAG
TTGATTTTTGTTTCGAGAAAATCACTATTGATAATGGGGTTTGAgtgggt
acagtttgtttgtttgCAATAAAAATTGAAGAGTCACTTTTATtggcaaa
aattgaaattgatataAATGAAAATTCGTTTCGCCCATTAGCTGGGTACA
CCTGCTGTGACCTATATATTTTGGGGCAACTTTAAGTCGACACTCTTTGG
CGAATTGTGACGAAGTTTGACGAATTGATAACAATCATTGCTCATTGAAA
TCACTGATCAATATTATGGGTGATCAATGTTTTCCAGGAGTTCATCCTCC
CTTTGAACTTTCCATGTTGACGACCATTTTATCAGGTGTGATCGCGCTTA
TGACCATTATCGGGAATGGGCTTATCATCATCACCGTCATCAAGGATCCG
CTGAAAAGACTGCATACACCATTCAATTATTTCCTGGTTAACCTTGCCGT
GGCTGACTTGATTGTGGGATGTTCCACGATGCCCGTATCCGTTTATTTCC
ATTACCAAGAGAGTACTGGTTTCATCGATTTGCGCGTTTCCAAGGTCCTT
CAGTCATCTATCTTCATCTCTGGCAGTGCGAGTATCTTGAGTCTACTAGC
GCTCTCCGTTGATCGCTACTTCTGCATCGTTTGGGCCATCAGATACAGAC
AGTGCTTAAACTGGAACCGTTGCCACATTATCACAGCTTGTATTTGGATT
TTCTCTCTTTCCTTTCCCTTTTTATCATGGAAACTTGGATACGTGAAATA
CTTGATGTTTTTCGCTTGTTCTTCTGTCCTTGTTGGTATTATCTTAATGT
TGTTCGTTTACGCCAAAGTACATTTATATCTTCAAAACCAAACGAAGCAG
TTACGAAAACGAACGACTTCTAAAGTGGACCAAACCACCAATCCACGTCG
ATTATCCATGAAACGTAAAGTGACACAAACCTTCCTCATCATAATGCTTG
CGTTTGTATTAGTTTACGTTCCCGCTTTCGTCATGATCTTTACGCTTCAA
TTTTGTGAATCATGTGGGTGCGTTTTCAGACATTGGCTTAGAGACCTTCA
ATTTCTATTGGTCGCTTCTAACAGCGCTATCAACCCTCTGATTTGTACGG
CACGATTGAAACAGTTCCGAACCTCAATTAAACAACTTTTCACCGGGAAA
AGAGCTAGGAACTCAGCCTCGAAAGCAGGTTTAACTAACCTAGCTTCTCG
ACAAATGTCTAATGAAACTACGACTACCTCGAACATGTAAATTCTAAAGC
AGGCAGAAAAAGGTTATCGCCAATTCTGGCCATCTTTTGTATATGTTTTT
TTTCGTGTATATAGGAAATAGGAAACTATAGTATCGAATATTTAAGGATT
GTAGACataatttttctgttttctgtctAAAATATCGGCTGTATcagaaa
taagttaccctctttgaagTGGATGCTAAATCTCTTGAGTTCTATTTCTT
TCTAAATAATCCAGTCACTTTTATTGGAAAGAGAAAATATAGACTTACGG
GACTTACTTcgatatcctgcaaacaaatgaaagatcgaaagttgtttcga
gatgtgaccTCACATGCTATTGcttttgaaaacaaacaaaaaacaaaatt
gatttggagcaaatttaca Run BLAST on NCBI protein sequence of TCONS_00024452-protein >TCONS_00024452-protein ID=TCONS_00024452-protein|Name=TCONS_00024452-protein|organism=Clytia hemisphaerica|type=polypeptide|length=324bp
MGDQCFPGVHPPFELSMLTTILSGVIALMTIIGNGLIIITVIKDPLKRLH
TPFNYFLVNLAVADLIVGCSTMPVSVYFHYQESTGFIDLRVSKVLQSSIF
ISGSASILSLLALSVDRYFCIVWAIRYRQCLNWNRCHIITACIWIFSLSF
PFLSWKLGYVKYLMFFACSSVLVGIILMLFVYAKVHLYLQNQTKQLRKRT
TSKVDQTTNPRRLSMKRKVTQTFLIIMLAFVLVYVPAFVMIFTLQFCESC
GCVFRHWLRDLQFLLVASNSAINPLICTARLKQFRTSIKQLFTGKRARNS
ASKAGLTNLASRQMSNETTTTSNM Run BLAST on NCBI transcript from alignment at sc0000492:237396..239114 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024452 ID=TCONS_00024452|Name=TCONS_00024452|organism=Clytia hemisphaerica|type=transcript|length=1719bp|location=Sequence derived from alignment at sc0000492:237396..239114 (Clytia hemisphaerica)
tgtaaatttgctccaaatcaattttgttttttgtttgttttcaaaagCAA
TAGCATGTGAggtcacatctcgaaacaactttcgatctttcatttgtttg
caggatatcgAAGTAAGTCCCGTAAGTCTATATTTTCTCTTTCCAATAAA
AGTGACTGGATTATTTAGAAAGAAATAGAACTCAAGAGATTTAGCATCCA
cttcaaagagggtaacttatttctgATACAGCCGATATTTTagacagaaa
acagaaaaattatGTCTACAATCCTTAAATATTCGATACTATAGTTTCCT
ATTTCCTATATACACGAAAAAAAACATATACAAAAGATGGCCAGAATTGG
CGATAACCTTTTTCTGCCTGCTTTAGAATTTACATGTTCGAGGTAGTCGT
AGTTTCATTAGACATTTGTCGAGAAGCTAGGTTAGTTAAACCTGCTTTCG
AGGCTGAGTTCCTAGCTCTTTTCCCGGTGAAAAGTTGTTTAATTGAGGTT
CGGAACTGTTTCAATCGTGCCGTACAAATCAGAGGGTTGATAGCGCTGTT
AGAAGCGACCAATAGAAATTGAAGGTCTCTAAGCCAATGTCTGAAAACGC
ACCCACATGATTCACAAAATTGAAGCGTAAAGATCATGACGAAAGCGGGA
ACGTAAACTAATACAAACGCAAGCATTATGATGAGGAAGGTTTGTGTCAC
TTTACGTTTCATGGATAATCGACGTGGATTGGTGGTTTGGTCCACTTTAG
AAGTCGTTCGTTTTCGTAACTGCTTCGTTTGGTTTTGAAGATATAAATGT
ACTTTGGCGTAAACGAACAACATTAAGATAATACCAACAAGGACAGAAGA
ACAAGCGAAAAACATCAAGTATTTCACGTATCCAAGTTTCCATGATAAAA
AGGGAAAGGAAAGAGAGAAAATCCAAATACAAGCTGTGATAATGTGGCAA
CGGTTCCAGTTTAAGCACTGTCTGTATCTGATGGCCCAAACGATGCAGAA
GTAGCGATCAACGGAGAGCGCTAGTAGACTCAAGATACTCGCACTGCCAG
AGATGAAGATAGATGACTGAAGGACCTTGGAAACGCGCAAATCGATGAAA
CCAGTACTCTCTTGGTAATGGAAATAAACGGATACGGGCATCGTGGAACA
TCCCACAATCAAGTCAGCCACGGCAAGGTTAACCAGGAAATAATTGAATG
GTGTATGCAGTCTTTTCAGCGGATCCTTGATGACGGTGATGATGATAAGC
CCATTCCCGATAATGGTCATAAGCGCGATCACACCTGATAAAATGGTCGT
CAACATGGAAAGTTCAAAGGGAGGATGAACTCCTGGAAAACATTGATCAC
CCATAATATTGATCAGTGATTTCAATGAGCAATGATTGTTATCAATTCGT
CAAACTTCGTCACAATTCGCCAAAGAGTGTCGACTTAAAGTTGCCCCAAA
ATATATAGGTCACAGCAGGTGTACCCAGCTAATGGGCGAAACGAATTTTC
ATTtatatcaatttcaatttttgccaATAAAAGTGACTCTTCAATTTTTA
TTGcaaacaaacaaactgtacccacTCAAACCCCATTATCAATAGTGATT
TTCTCGAAACAAAAATCAACTTTCAAGATAAAATAACGATTATTTATGTT
TCCGTTTTTATCACCTTTAAACATTAAAATATTAGATGTTTCTCAATCCG
GCCATCTATCAAAGTTTAC Coding sequence (CDS) from alignment at sc0000492:237396..239114 >TCONS_00024452 ID=TCONS_00024452|Name=TCONS_00024452|organism=Clytia hemisphaerica|type=CDS|length=975bp|location=Sequence derived from alignment at sc0000492:237396..239114 (Clytia hemisphaerica)
TTACATGTTCGAGGTAGTCGTAGTTTCATTAGACATTTGTCGAGAAGCTA
GGTTAGTTAAACCTGCTTTCGAGGCTGAGTTCCTAGCTCTTTTCCCGGTG
AAAAGTTGTTTAATTGAGGTTCGGAACTGTTTCAATCGTGCCGTACAAAT
CAGAGGGTTGATAGCGCTGTTAGAAGCGACCAATAGAAATTGAAGGTCTC
TAAGCCAATGTCTGAAAACGCACCCACATGATTCACAAAATTGAAGCGTA
AAGATCATGACGAAAGCGGGAACGTAAACTAATACAAACGCAAGCATTAT
GATGAGGAAGGTTTGTGTCACTTTACGTTTCATGGATAATCGACGTGGAT
TGGTGGTTTGGTCCACTTTAGAAGTCGTTCGTTTTCGTAACTGCTTCGTT
TGGTTTTGAAGATATAAATGTACTTTGGCGTAAACGAACAACATTAAGAT
AATACCAACAAGGACAGAAGAACAAGCGAAAAACATCAAGTATTTCACGT
ATCCAAGTTTCCATGATAAAAAGGGAAAGGAAAGAGAGAAAATCCAAATA
CAAGCTGTGATAATGTGGCAACGGTTCCAGTTTAAGCACTGTCTGTATCT
GATGGCCCAAACGATGCAGAAGTAGCGATCAACGGAGAGCGCTAGTAGAC
TCAAGATACTCGCACTGCCAGAGATGAAGATAGATGACTGAAGGACCTTG
GAAACGCGCAAATCGATGAAACCAGTACTCTCTTGGTAATGGAAATAAAC
GGATACGGGCATCGTGGAACATCCCACAATCAAGTCAGCCACGGCAAGGT
TAACCAGGAAATAATTGAATGGTGTATGCAGTCTTTTCAGCGGATCCTTG
ATGACGGTGATGATGATAAGCCCATTCCCGATAATGGTCATAAGCGCGAT
CACACCTGATAAAATGGTCGTCAACATGGAAAGTTCAAAGGGAGGATGAA
CTCCTGGAAAACATTGATCACCCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024452-exon-sc0000492-1491911889:237396..239114 | TCONS_00024452-exon-sc0000492-1491911889:237396..239114 | Clytia hemisphaerica | exon |
| TCONS_00024452-exon-sc0000492-1510915933:237396..239114 | TCONS_00024452-exon-sc0000492-1510915933:237396..239114 | Clytia hemisphaerica | exon |
| TCONS_00024452-exon-sc0000492-1575043694:237396..239114 | TCONS_00024452-exon-sc0000492-1575043694:237396..239114 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000492 | supercontig | sc0000492:237396..239114 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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