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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024503 ID=TCONS_00024503|Name=TCONS_00024503|organism=Clytia hemisphaerica|type=transcript|length=787bp
gtttatttaatttttaccactttcacaaaaattcaaaaaattacaaagaa
aaaaattacagaaattacttATTGACACTAGTATCGTGATCCAAAAAtcc
gaaaatctaacaaaaattacaaaaattacacACGACAATAATCAAACTTT
ACAATCTTTTAGTTATGTTtctttgaaagtttcaaaaggTTCAAATGTTT
CTCAAACCAGCTCTCTTTGTCATTTCCGAAGCGTAGAAATCTAACATCTC
CGAAAATGGATCTCTTTTTGCTTCACGACACACATATTTTGGGCTCGAGA
AACTTCCTTCGTTGACACATCTTCTCATTGAGCCGGTATAGGGATTCCCT
TCACGGCAACATCTCCCATTGTTTCCCTCACAGCCAGCGTTTCCCAGTGG
AATACAGCTTCCTCTTCTTGTAAATTGACCACGGTAGTAATCACTTAAGG
GATCTCTTTTTGCTTCACGACACACATATTTTGGGCTCGAGAAACTTCCT
TCGTTGACACATTTTCTCATTGAGCCAGTATATGGATTTCCTTCACGACA
ACATCTCCCATTGTTTCCCTCACAGCCAGCGTTACCCAGTGGAACACAGC
TTCCTTGTACTTTTTCAAAAGCCAAAAGTGCGAAAAGTATCGTCAGTAAC
ATTGTCTTCATCTTCATATAATTTAAAACCTATAAAGaataattgacatt
tttcataaTAATCCTTAAACTGTGTTACAAACAGTACATTTGATTAAACA
ACGGTGATATATTGCTATAACAAGAAGGTGAGAGACT Run BLAST on NCBI transcript from alignment at sc0000501:71031..72585+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024503 ID=TCONS_00024503|Name=TCONS_00024503|organism=Clytia hemisphaerica|type=transcript|length=1555bp|location=Sequence derived from alignment at sc0000501:71031..72585+ (Clytia hemisphaerica)
gtttatttaatttttaccactttcacaaaaattcaaaaaattacaaagaa
aaaaattacagaaattacttATTGACACTAGTATCGTGATCCAAAAAtcc
gaaaatctaacaaaaattacaaaaattacacACGACAATAATCAAACTTT
ACAATCTTTTAGTTATGTTtctttgaaagtttcaaaaggTTCAAATGTTT
CTCAAACCAGCTCTCTTTGTCATTTCCGAAGCGTAGAAATCTAACATCTC
CGAAAATGGATCTCTTTTTGCTTCACGACACACATATTTTGGGCTCGAGA
AACTTCCTTCGTTGACACATCTTCTCATTGAGCCGGTATAGGGATTCCCT
TCACGGCAACATCTCCCATTGTTTCCCTCACAGCCAGCGTTTCCCAGTGG
AATACAGCTTCCTCTTCTTGTAAATTGACCACGGTAGTAATCACTTAAGG
GATCTCTTTTTGCTTCACGACAAACATATTTTGGGTTCGAGAAACTTCCT
TCGTTGACACATCTTCTCATTGAGCCGGTATAGGGATTCCCTTCACGGCA
ACATCTCCCATTGTTTCCCTCACAGTCAGCGTTTCCTAGTGGAATACAGC
TTCGTCTTCTTGTAAATTGGCCACGGTAGTAATCACTTAAGGGATCTCTT
TTTGCTTCACGACAAACATATTTCGGGTTCGAGAAACTTCCTTCGTTGAC
ACATCTTCTCATTGAGCCAGTATAGGGATTCCCTTCACGACAACATCTCC
CGTTGTTTCCCTCACAGTCAGCGTTTCCTAGTGGAATACAGCTTCCTCTT
CTTGTAAATTGGCCACGGTAGTAATCACTTAAGGGATCTCTTTTTGCTTC
ACGACACACATATTTTGGGCTCGAGAAACTTCCTTCGTTGACACATCTTC
TCATTGAGCCGGTATAGGGATTCCCTTCACGGCAACATCTTCCATTGTTT
CCCTCACAGTCAGCGTTTCCTAGTGGAATACAGCTTCCTCTTCTTGTAAA
TTGGCCACGGTAGTAATCACTTAAGGGATCTCTTTTTGCTTCACGACACA
CATATTTTGGGCTCGAGAAACTTCCTTCGTTGACACATCTTCTCATTGAG
CCAGTATAGGGATTCCCTTCACGACAACATTTCCCATTGTTTCCCTCACA
GCCAGCGTTTCCCAGTGGAATACAGCTCCCTCTTCTTGCAGATTGGCCAA
GGTAGTAATCACTTAAGGGATCTCTTTTTGCTTCACGACACACATATTTT
GGGCTCGAGAAACTTCCTTCGTTGACACATTTTCTCATTGAGCCAGTATA
TGGATTTCCTTCACGACAACATCTCCCATTGTTTCCCTCACAGCCAGCGT
TACCCAGTGGAACACAGCTTCCTTGTACTTTTTCAAAAGCCAAAAGTGCG
AAAAGTATCGTCAGTAACATTGTCTTCATCTTCATATAATTTAAAACCTA
TAAAGaataattgacatttttcataaTAATCCTTAAACTGTGTTACAAAC
AGTACATTTGATTAAACAACGGTGATATATTGCTATAACAAGAAGGTGAG
AGACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024503-exon-sc0000501-1491911889:71031..71463 | TCONS_00024503-exon-sc0000501-1491911889:71031..71463 | Clytia hemisphaerica | exon |
| TCONS_00024503-exon-sc0000501-1510915933:71031..71463 | TCONS_00024503-exon-sc0000501-1510915933:71031..71463 | Clytia hemisphaerica | exon |
| TCONS_00024503-exon-sc0000501-1575043694:71031..71463 | TCONS_00024503-exon-sc0000501-1575043694:71031..71463 | Clytia hemisphaerica | exon |
| TCONS_00024503-exon-sc0000501-1491911889:72232..72585 | TCONS_00024503-exon-sc0000501-1491911889:72232..72585 | Clytia hemisphaerica | exon |
| TCONS_00024503-exon-sc0000501-1510915933:72232..72585 | TCONS_00024503-exon-sc0000501-1510915933:72232..72585 | Clytia hemisphaerica | exon |
| TCONS_00024503-exon-sc0000501-1575043694:72232..72585 | TCONS_00024503-exon-sc0000501-1575043694:72232..72585 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000501 | supercontig | sc0000501:71031..72585 + |
Blast
The following BLAST results are available for this feature:
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