|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024573 ID=TCONS_00024573|Name=TCONS_00024573|organism=Clytia hemisphaerica|type=transcript|length=995bp
TTGTAATTGTAAATCATTTTTCTTTGCCTTCACAGGTACTCTTCATAAGA
TTAGCTCCAAACTCTGTTTTGCTGCCTTACAATTCAAAAAGAAACCTAAG
TCACCATTTCATGAGATTTTTGGTTGTTCTGAACATCTGGCTTATTGCCT
CTCTTTGGTCGATTAAAAAATAGCTTGGTTGACGTCATCCTGACTTTGAA
AAAGAAGGTTGGTCGGTCAGTTGGGGTAAAAAAATTTACCGTTTGAAAGA
TATGGCTTAAATCGGCATCTGCACCCGCTGTCTTGTTATTAAAACACTTT
GTTGGTAACAATGCCCTGTTTTCATTATGCCAAAGTGGTTCCACTTGGTa
agtaaaagaaagaaaaagaaggttGGTTGGTCAGTTGGGGtaaaaaaatt
tactgtttGAAAGAAATGGCTTAAATCGGCATCTGCATCCGCTGTCTTGT
TATTAAAACACTTTGTTGGTAATAATGCCCTGTTTTCATTAAGCCAAAGT
GGTTCCACttggtaagaaaaataaatatttaggGAAAAAATCGGTACAAA
CTGGATTTCCAGCTGAATTTGAAATGAATGTCTGCTTGAGCATTACTGGC
TACACGGCTGAGAATTTGTAAACGGCAGAGAGTGATGGTCAGTTAGGAAC
GTTTGGcaagttcctgtacgcggccgttaccaaagaaatcataacAGCAC
TCATAAAAAACTATGTTTGCATcttttttttactgttttatATAGCAAAC
ATGGTATAGTCATCACAGGACGATTTTGATTTATTTGGGCATTACTCTGA
AAGTATTAATCCTAGATATCTCTGACCTTGAAATTAAGTAGATGttccta
aaatttattttaaacgtGTCCGGTAAATACCCTGCAttttggggtaatta
cgggacacccTTGGGGAAAATATGGGACAATTgtataaaatgttattgaa
GAATCCAGTTATCTTTCCAAAAGGTATTTGAGGTTTTGCATCCAC Run BLAST on NCBI transcript from alignment at sc0000502:225898..226892 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024573 ID=TCONS_00024573|Name=TCONS_00024573|organism=Clytia hemisphaerica|type=transcript|length=995bp|location=Sequence derived from alignment at sc0000502:225898..226892 (Clytia hemisphaerica)
GTGGATGCAAAACCTCAAATACCTTTTGGAAAGATAACTGGATTCttcaa
taacattttatacAATTGTCCCATATTTTCCCCAAgggtgtcccgtaatt
accccaaaaTGCAGGGTATTTACCGGACacgtttaaaataaattttagga
aCATCTACTTAATTTCAAGGTCAGAGATATCTAGGATTAATACTTTCAGA
GTAATGCCCAAATAAATCAAAATCGTCCTGTGATGACTATACCATGTTTG
CTATataaaacagtaaaaaaaagATGCAAACATAGTTTTTTATGAGTGCT
gttatgatttctttggtaacggccgcgtacaggaacttgCCAAACGTTCC
TAACTGACCATCACTCTCTGCCGTTTACAAATTCTCAGCCGTGTAGCCAG
TAATGCTCAAGCAGACATTCATTTCAAATTCAGCTGGAAATCCAGTTTGT
ACCGATTTTTTCcctaaatatttatttttcttaccaaGTGGAACCACTTT
GGCTTAATGAAAACAGGGCATTATTACCAACAAAGTGTTTTAATAACAAG
ACAGCGGATGCAGATGCCGATTTAAGCCATTTCTTTCaaacagtaaattt
ttttaCCCCAACTGACCAACCaaccttctttttctttcttttacttACCA
AGTGGAACCACTTTGGCATAATGAAAACAGGGCATTGTTACCAACAAAGT
GTTTTAATAACAAGACAGCGGGTGCAGATGCCGATTTAAGCCATATCTTT
CAAACGGTAAATTTTTTTACCCCAACTGACCGACCAACCTTCTTTTTCAA
AGTCAGGATGACGTCAACCAAGCTATTTTTTAATCGACCAAAGAGAGGCA
ATAAGCCAGATGTTCAGAACAACCAAAAATCTCATGAAATGGTGACTTAG
GTTTCTTTTTGAATTGTAAGGCAGCAAAACAGAGTTTGGAGCTAATCTTA
TGAAGAGTACCTGTGAAGGCAAAGAAAAATGATTTACAATTACAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024573-exon-sc0000502-1491911889:225898..226892 | TCONS_00024573-exon-sc0000502-1491911889:225898..226892 | Clytia hemisphaerica | exon |
| TCONS_00024573-exon-sc0000502-1510915933:225898..226892 | TCONS_00024573-exon-sc0000502-1510915933:225898..226892 | Clytia hemisphaerica | exon |
| TCONS_00024573-exon-sc0000502-1575043694:225898..226892 | TCONS_00024573-exon-sc0000502-1575043694:225898..226892 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000502 | supercontig | sc0000502:225898..226892 . |
Blast
The following BLAST results are available for this feature:
|
