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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024632 ID=TCONS_00024632|Name=TCONS_00024632|organism=Clytia hemisphaerica|type=transcript|length=1031bp
ATAAAATGTCTTTCTGTGTTTCCATGACGCCAGTCACATTATCTCCTTAT
AAGGGTGCACGTGACAAACCCTTGTGTGATCCaccaatttttcattattt
gtaGCATTATCAATCATCCGTGTTACATTTTAACAAAGCTTTTTATGTAA
TAGTCATTAATGTTAATTAGGGTTTCAAAATACACTGGAAGAATCTtgta
aaaatctatttttgtGAATTCTATATTAGTCAATATAGTTTATAAAAATG
GTTACGGCAACAAATGAACTAATTATAAAGTTTGACCAAATTCATTTCTA
GGTCCTAATTATTTAtgcaaagataaagaaaatggcaaTTATGAATATTC
ATTTTTCGGAGTAGTCAATCCACATTACATCTTGCAATGTTCCAATGGTG
TTGCATCTTGTCAAACATGTTGGCCTGGAAACCTCTTCTTTCGTCCTGAC
TGCAACCAATGTCTTTTCAATTATGACGATCAATGCACTGCCACTACAAG
CAAAACACCTCAACCAACCACGGCCACCACCAcaacaaaactttcaacaa
aaacgaCAGCTCAGCCACAAACCACACGACTTTCAATCCAATGTCCTCAG
AATGAATGCACAAAGAGAGGTTTACACTTCAGTGGAAACATTGCTGATCA
ATCCAACCATCGACAATACATTGCATGCTGGGATGGAAAGACAGTCGGTT
GTGTAAGGTGTCCTGCAAACTTGGTATTTGACGAGATCATGAATGCTTGT
GTTTATCCTGTTGCTCCTGACAACAATAACGGAGGACTGAATGTCTATct
ttaaaagttaaaagttcATCAAACATATCCAAAATGATCGAACATTCTAG
GACAATATTTACGCGATTTTGGTATTTAGCTTATATAAGTTTAGTTTTAA
TAATTTATTAGAATTTATGTTTAATTGTATATTACCCCattctattttgt
aaatatctCGTTAATTCTCCGCTATTCCAATATAAATTACTGTCGTTGAT
TAGAAAATTTCGTAAAAAGAAGAATTCCAAG Run BLAST on NCBI transcript from alignment at sc0000506:170307..171686+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024632 ID=TCONS_00024632|Name=TCONS_00024632|organism=Clytia hemisphaerica|type=transcript|length=1380bp|location=Sequence derived from alignment at sc0000506:170307..171686+ (Clytia hemisphaerica)
ATAAAATGTCTTTCTGTGTTTCCATGACGCCAGTCACATTATCTCCTTAT
AAGGGTGCACGTGACAAACCCTTGTGTGATCCaccaatttttcattattt
gtaGCATTATCAATCATCCGTGTTACATTTTAACAAAGCTTTTTATGTAA
TAGTCATTAATGTTAATTAGGGTTTCAAAATACACTGGAAGAATCTtgta
aaaatctatttttgtGAATTCTATATTAGTCAATATAGTTTATAAAAATG
GTTACGGCAACAAATGAACTAATTATAAAGTTTGACCAAATTCATTTCTA
GGTCCTAATTATTTAtgcaaagataaagaaaatggcaaTTATGAATATTC
ATTTTTCGGAGTAGTCAATCCACATTACATCTTGCAATGTTCCAATGGTG
TTGCATCTTGTCAAACATGTTGGCCTGGAAACCTCTTCTTTCGTCCTGAC
TGCAACCAATGTCTTTTCAATTATGACGGTAAATTGATATATTTGGATCT
TCCCATAATCTTTGCATGAGGAAACTCTCATTCTACTTTCTCCTAAGAAA
CTTGTTATATAACCTAAAAACATCACCAACCTAGCTGTTACTGTACTGAT
ACAATTATTGTTTTAGTATTTATTGATTTACGGCTGAGCATAATACCAGG
TTTTTCTGGCACAATATACTCCAATTCGTCGCTGGTGACATTACACAGCT
CGATGGTTTTAGCAGGGTAACTCATTAAGTGCCATCACTCcgtaacttca
aattttcaagatcTACCGGTTCGGTAGATGATCGAACTAATTGAAGAATT
ATAATTCAAATTGTTCATAACCTTTAGATCAATGCACTGCCACTACAAGC
AAAACACCTCAACCAACCACGGCCACCACCAcaacaaaactttcaacaaa
aacgaCAGCTCAGCCACAAACCACACGACTTTCAATCCAATGTCCTCAGA
ATGAATGCACAAAGAGAGGTTTACACTTCAGTGGAAACATTGCTGATCAA
TCCAACCATCGACAATACATTGCATGCTGGGATGGAAAGACAGTCGGTTG
TGTAAGGTGTCCTGCAAACTTGGTATTTGACGAGATCATGAATGCTTGTG
TTTATCCTGTTGCTCCTGACAACAATAACGGAGGACTGAATGTCTATctt
taaaagttaaaagttcATCAAACATATCCAAAATGATCGAACATTCTAGG
ACAATATTTACGCGATTTTGGTATTTAGCTTATATAAGTTTAGTTTTAAT
AATTTATTAGAATTTATGTTTAATTGTATATTACCCCattctattttgta
aatatctCGTTAATTCTCCGCTATTCCAATATAAATTACTGTCGTTGATT
AGAAAATTTCGTAAAAAGAAGAATTCCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024632-exon-sc0000506-1491911889:170307..170784 | TCONS_00024632-exon-sc0000506-1491911889:170307..170784 | Clytia hemisphaerica | exon |
| TCONS_00024632-exon-sc0000506-1510915933:170307..170784 | TCONS_00024632-exon-sc0000506-1510915933:170307..170784 | Clytia hemisphaerica | exon |
| TCONS_00024632-exon-sc0000506-1575043694:170307..170784 | TCONS_00024632-exon-sc0000506-1575043694:170307..170784 | Clytia hemisphaerica | exon |
| TCONS_00024632-exon-sc0000506-1491911889:171134..171686 | TCONS_00024632-exon-sc0000506-1491911889:171134..171686 | Clytia hemisphaerica | exon |
| TCONS_00024632-exon-sc0000506-1510915933:171134..171686 | TCONS_00024632-exon-sc0000506-1510915933:171134..171686 | Clytia hemisphaerica | exon |
| TCONS_00024632-exon-sc0000506-1575043694:171134..171686 | TCONS_00024632-exon-sc0000506-1575043694:171134..171686 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000506 | supercontig | sc0000506:170307..171686 + |
Blast
The following BLAST results are available for this feature:
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