TCONS_00024687 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024687
Unique NameTCONS_00024687
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length178

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024687 ID=TCONS_00024687|Name=TCONS_00024687|organism=Clytia hemisphaerica|type=transcript|length=178bp
CAATTTGTGTATTCATCGTGAAAGTCCAAACTCCTCCTGAAATTGTCGAG
CTTTCCGCGCAGTATTTTGTATATGTTGAGGGAGCTCCAACAGTAGCGTA
ATATTCGACACCAGGTGTAAGTGTTACGTCGGAGATATCACATTGTAATC
TATTACCGCCGATATTTGAGCATTTCGT
Run BLAST on NCBI

transcript from alignment at sc0000507:72376..72620+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024687 ID=TCONS_00024687|Name=TCONS_00024687|organism=Clytia hemisphaerica|type=transcript|length=245bp|location=Sequence derived from alignment at sc0000507:72376..72620+ (Clytia hemisphaerica)
CAATTTGTGTATTCATCGTGAAAGTCCAAACTCCTCCTGAAATTGTCGAG
CTTTCCGCGCAGTATTTTGTATATGTTGAGGGAGCTCCAACAGTAGCGTA
ATATTCGACACCAGGTGTAAGTGTTACGTCGGAGATATCACANTGAGGGA
GCTCCAACAAGAGCGTAATATTCGGTACCAGGTGTAAGTGTTACGTCGGA
GATATCACATTGTAATCTATTACCGCCGATATTTGAGCATTTCGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013857XLOC_013857Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024687-exon-sc0000507-1491911889:72376..72489TCONS_00024687-exon-sc0000507-1491911889:72376..72489Clytia hemisphaericaexon
TCONS_00024687-exon-sc0000507-1510915933:72376..72489TCONS_00024687-exon-sc0000507-1510915933:72376..72489Clytia hemisphaericaexon
TCONS_00024687-exon-sc0000507-1575043694:72376..72489TCONS_00024687-exon-sc0000507-1575043694:72376..72489Clytia hemisphaericaexon
TCONS_00024687-exon-sc0000507-1491911889:72557..72620TCONS_00024687-exon-sc0000507-1491911889:72557..72620Clytia hemisphaericaexon
TCONS_00024687-exon-sc0000507-1510915933:72557..72620TCONS_00024687-exon-sc0000507-1510915933:72557..72620Clytia hemisphaericaexon
TCONS_00024687-exon-sc0000507-1575043694:72557..72620TCONS_00024687-exon-sc0000507-1575043694:72557..72620Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000507supercontigsc0000507:72376..72620 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00024687 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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