TCONS_00024731 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024731
Unique NameTCONS_00024731
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2844

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024731 ID=TCONS_00024731|Name=TCONS_00024731|organism=Clytia hemisphaerica|type=transcript|length=2844bp
GAAAGAAGATAGATCTGTTTTGTTTGTTCGAAAGTGTCCgagaaaaaaat
gttggatATCTTGCGTCCGGTCTCACATGCTCACGCTGCTACGCCCGCCA
TCTTTAATAAAGTTGCCCAGttggaaagaaaaaagACCGGAGACTTTTTA
ACGAAAAAGATACGCGCACGACCTAGTCGACAACAGTTAATACAAAGACA
CATCCTCTCTGCAGATTCGCGTGTCGATCCGTCCCTTCTGGAAAAGGTTG
GCAAACTCGAACGTCAACGCATCGCTGATCAACTTAACGAGCGTCTTCTT
CAACGTCCTGGTCCCATCGAGCTTATACAAGATCGAATCCTTCCTGTCGA
ATCACCCATACAAAATGCTATCGACCAAGGCAGTGTAGACTATCAACAGA
CCGTTTCCCCCGCTTCCTCACACGCGGATTCGCCTTCCGTCTCCGAATTA
GAGACAGGAATTCACACTTTGAATTGTACTTCACCTTCACCGCCCCCTCC
GCCACATTCAACGCCACAAGTTCCGCCCTTACCGAACAATTTCTCTGATG
TATCCTTCAAAAATCAACTTAAAACCGTTTCCGAATCGGGGAAAACTTCA
AACCCGTTATTCGTTTCGGATTCGTTTAAATCTGCACACTCTATATCACT
CTCACAACGTGAAAACGAACGTCTCGTCAAATCGGTCAATAAAAAAACAC
GTCAACAGAAAccgaaagtaaaaaaattgaaattccacGAATGTCTACCG
GGGTCCGGTACCGTGAAAAAAGTGGAGGCGGAAAGTGAGGTCGTAGATGA
GCGATACCAGAGACTTTTGGAGCAACAGACTTTATATTTACGCTTACAGG
TGATGCAACAGAATGCTGTTATGAACGCTCTGCAGGGCAACCCAGAATCC
ATGGATCAAGTGAACGAAGAAATTGAACACATGatgcaaaaagaaaataa
taaaacgaACGATACCAATATTAAATCAATAGACGGTAAAAAATTGGACG
ATTTACGAGTTGTCGATTTAAGAGCGCAACTCAAACATCGTGGACTCTTA
GTATCGGGGGCAAAAGCCAAATTGATTGAAAGACTTCTAGCGTTTGAAGA
AGGGAAGTCAACTCCCGCCGATTTCGCTTATTCGGGAAGTAATTTATCTC
ACGATGCCAGTATTGTGGCTAGTAAGACCACGTCCACTATGGTCCCTTCA
ACCACAGTGATGCAAGTAGCAACTTACGCTACAAACAGTGGTCAAACATA
CCAAGTGGTACAAACCGTCCCACAATCCTCTCCCAGCATCATGCAATACC
AGGTCGTCCCTGCTACCTCTTCTTCCGACGAGCAACTCTCTAGACTGGAT
CAAGTCAACACGGTTCCTGTGATGGCCCTCACACAGCCTAGTGTAATGTC
AGTTCAAGAGAGAGTAAGCGACAAGCCACTTCGCGCCCAAGCAACGCCCT
CACCATCGCACATCCAATTCCATATCACTCCCCCGCCTCAACCACAAACG
CCCACCATCGTTCTCCACTCGGGGCCGCCTCTGCAACAAGCTTCCCTCTA
CCAACGACAGCGACAACAAAAggtcaaagttcaaaaattacCTGTCATCA
GTCAAGGCCAGTGTTTCGATCTTTCGGAAAGCAACTCGCAACCGCTCGGC
CTCTCACAGTCCGTACCACCCATGCAACTGAACAATAATTACTTGATGGA
AGCGAACCAATGTAATCTCAACTACAACACATCTCTCAGTAATTCTTCCC
TTCACACAGACGTCAATGCAGACAACGACCTCTTTAACAACCCCTCAACG
CAATTTCGTGGTCGTGCATCCAGTGAACCGGCTTCTCAATTGAAGAAAAT
GCATCCACTGAAATCAGATAGTACTAAATCAGTGTTTAGCCACCAACAAC
AAGACCTTTCACTTCAATTCCCTAAAATGTCACCCTCTCCGTCACTGAGC
CTCAAAGATCATCACCAACTACCCAATTCCATCAAGTCTGAGAATATGGA
TGACATCATGGACATTATTGGAGAACTCTCCTCGTCACCAGGCCTTATGA
AAGAACCGCCACCTCCTTACAACTCGTGTTACTATGACAACAAGAAATTG
CTGACAGAGCAAAAACCGTTCAACACTTCGGACGCGCACGATTTGAACCT
TTTATCAGGTTCGCCTTCACAGAACTTTTTGAACAATTCTTTTTATAACA
CGGCTGGTTTTAACACCTCCTCCTCCACCGGAAGCATCCCGCAACAAACC
TCACCTACGCCTTTCCGTGGAACCTCTCCTTCGCATTTCATGAACACGGC
GGCGCTTTCACCCACCAACGCCACCACGGATGACCCAATGGAGTTGGACC
GCTTTCCCTCACCAAACATGATGGCGTCCAACAATTCTTTAAACTGGCTC
GACCTGAATATGGAACCAAATTCTCCTAATATGAATTTTCAGACAATAAA
AGACAATAATACTGCGAATACCACAAATTCAATGAATATGGATCTTCAGA
ATGGGATGTTTAGCAACGAGCTGAACAACCAACAACAAACTTTATATAAT
AATCAAAACAGACAATCGCAGAATTCTCTGTTTTACGGTAGCAGTCCTCG
ACAGCAAGATGgttttatttcactttttgatctCGAGGGAGGCGAATACT
AACTTAACAATTTTTCTTCAcacgcaaaaaatcaaaaaattctgtTCTTT
CTTTCTCATGTAATGAAAATGttgtataaattttttttaatttaatattt
ttttctcaagaaataGTCTTTTGTTTAATTTTCGTAATTTTCACTTCTTT
ACGGtaaaaaacttgttttaaaagttattgaaaattaattaaTA
Run BLAST on NCBI

transcript from alignment at sc0000509:143573..153994+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024731 ID=TCONS_00024731|Name=TCONS_00024731|organism=Clytia hemisphaerica|type=transcript|length=10422bp|location=Sequence derived from alignment at sc0000509:143573..153994+ (Clytia hemisphaerica)
GAAAGAAGATAGATCTGTTTTGTTTGTTCGAAAGTGTCCgagaaaaaaat
gttggatATCTTGCGTCCGGTCTGTAAGTAACTTTTATCTCTTTGACTAT
ATTTGGAAAGATTATATCTTTAACTCCATCCGCAAAGACACACTATGGGA
TGTCATTTCCATATGGCTTGTGCATCCACCTTTACTTGCGACACCTGCTG
ACAACACTATAATGTATGCAGAGGAGTTTGCAACTTTTGGACAAGTAACA
TCTCTTTtgttactttaatcggattaatttttgcaacattttcggatcag
tattttgaaaactttatcGTGGATTTCAATCTTGGCAAGTTCTcgatgac
gtaatcttttatacgggaACAACCAATAAACACCGGGCGTTAGCCGCCAT
TCAAAACTGGCGGCAAACGCCCGATGCTTTTCAGGTCTTTCTGTATTAAA
GATTAcgttgtcaatataaaaaatcaGCCAGAAATTTGTGAAGAGTTGCC
CAGTAAACGCTAAAAATAGCATATTTACATTGTATTTTACGCTGGaaatc
tgattttgaaaatttaatacCCCGAGTCGATGGTAAAAATTCGTGATAAT
GCGAAATAAAATCTAGCCAAAATTTATTCAACTAAAATAATGCAAGTCCA
TTGGTATTTATCGCTTAAATGGtaactctctgtaattcgatttCGAGCTA
ATtaaaaatactttaatgggataaactttcgcggggattaaattttgcgg
ttgggcctatccgcgaaatttttgaatttcgcggggactttaTTTCGcag
gtggcactattgggttacaatattttcacgattttgtgacttttccTGTC
AAATcttgcatgttggttgttgaaatacacattatttgcgtctctttgat
gcaagtaaccattcaaatagtatttatttgacatgttttgagttttgttt
agaaatatttcgcggatgaggcccttccaaatttccattgggacttgtcg
cgaaatctgtgaaatttcatccctgcgaaagtttatcccataaAAGTAGT
CAATTATTCGAATTGCAGACTGATTTTGCGAGCTTTAGGAGTTTCGCTTT
ATTGTGGGTTACGGTTTAGATGCTACAAGCAATACTCTCAACTATTTTTT
AAATGACCCAGTATCGCCTCTCTTTTCTCTACAATTGCTGACCCCCAAAA
AAAGAAGCTCTtgtttaactgaaacaattaTGACGTAAACTGATGACGTA
TGAATGAAGAGAGAGATTCATCTCTTCGTCATTTTACTCGGAGGTCATAT
CATCGCGCATCTTGTATTTCAAATTTATGACTTTCAAATGAAAACATCAC
AAAAAAAGGTCAATTATGACAAAAGAAGTCTTGTGGCCTACACGATTTTT
TGGATGCACTTTTCTCTTACACAAAACTTGATCCATCCCTCAGTCATGTT
TTTGCACTCTGTTTACATTCAATAACCTAAGGCAGTTCATTTAATCCTTC
TACCGGATTGAATTTAAGTCAACAATAATGGCTTGTATGTCAATCTAATG
CACCAACAATTCTACATATCTTATTTATCTTATTATTCGCAAATATATCT
GATATTCTCCAACCACGCTGAAACATGATACGGAAAAGTCTCCGTGGAGG
AGTCCTCCTTGCCCCTAACACACTACTGAATGACGCTCCAAAGTCTCTCC
TTCACAGTGTTTGACTTTCACTTCGAGCTTTCAGTGTTGATTTAACAAGC
TATAGCTtactttttaaagatattttcttcCCGTTTCTTACCTGCCGTCA
ACATTATTAACTTTTCTAAAGTATACCATTCTTTATAATGCAAAATGACT
TTCGTTGTTTTTCCAGCACATGCTCACGCTGCTACGCCCGCCATCTTTAA
TAAAGTTGCCCAGttggaaagaaaaaaggtaCGTGTAATTTTGACTTGTT
TATGCTTTCTTGGAGCCTCACTTACGTACAGAGCAGAAAGTCTAGAACAG
AAAATCTCAAATTATAAAAGGTATTTTATGAAGGTTTTAGttagctgaaa
aattaaaacaatccCTTCTCACGGACTCGGATTGGATTGATCGCCAGTTA
AATAACCACACAAGTTTTGATTACAGAAACTCAATTGCTAGGCTTTCTTC
ATTCTTTTAGACCGGAGACTTTTTAACGAAAAAGATACGCGCACGACCTA
GTCGACAACAGTTAATACAAAGACACATCCTCTCTGCAGGTAAGCACCCC
ATTTTTTTTCGCTCAAATTATTTCAGTGTCTTGCTAATTGTGAGTGATTC
TATAAGACGTTTTCTTACTTAGGTGTCCATGTTGTTCTCAAGTTGAACCC
AACAAACATATCTCATCTCATATCTAGTCGACACATCGAAATTAAAAAGA
cttattatattttcaattttctcatgAGGGAAGGTTCAGGGTGACTTATC
GGAACTAAAGGTAGCATTCTTTCTGGAGCTGGTAAAGAATGTTATCTAAG
AGTGGTTTTATTCAAAATACGGACCAGATTTCACTGGTATACCTTGGGTA
CCGATAAGTGCTGTTGATCATCTTCTTTACTTATGTATGATattgtctgt
ctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtct
attGATCTGTAGGTTATTGTTTTTTCTGGTCAAGTGGTGCGGGTTGAACA
GCCTAACCTGAAGAAATAGTTGGCAGTTAAAAGTACGGAGTGGAAGTTTC
AAATTAAGATTATGAGTTCGAACGCTATTTGAGTGTGTTCAGAAAGTGGT
GTATATGAAATTAATTGACATTATAACAACCAGTTAAAAGAAGTAAATGG
ATTGACGTCACATAGGAAAAAGGgttttaaacaatattttgaatcGTTTT
CTTTGACCACAAGATTTGtattggaaaaaactttttggttgCACAGCGTT
TCGTCACAGGAAGAGACTGCTTTTTCGATGTTTgtgaaatttcaagaaaa
tgtgCGGAAATTGTCTGCCCTCCTCTTTTTATAACTTACAAGAGATGATT
GGTGATTTCCGCTTATTGAGGTGACCGCAAATGAATTGACCGGTTTCCTT
CGTATccttctgatgacgtcatttcgaTTTTGAAGGGGCTCACTTGTTTA
TATTATCTTAACGTTCCTTTACAAAAactttgaaatgtcatttttgacaa
ttttgttttgattttggagtGACGCTTTATCCATACCTGTTTATAGATTA
CTTAACCTCTGATCACATCTCTTAAGTCTGAATCGACATCAAAACACGTG
CCTTGTTTCCATGGTAACATATAGATTAAGTCAATTGGTAATTAATGTTA
GCTATAGCCATTTTGTTTAATGACTGTCCACAAAAAAGCTATTAATATCA
ACCCTAACCGATAATCAGAGAGTTCTTAGTCTCCTCACCTTCTTTTGCTT
TTGAAAGTTCCATTGAAAGTTCCATTGAAAGTTCcattgaaaattccatt
gaaagtTCCATTGAAAGTTCCATTGAAAGTTCCTCAAGAGTAGCAAGAGA
GATACCACACCTGATCTCAGACTTCGGTTTTCAGCTTATCGCTTCCTTTT
GTGTTTTGTGCATTCCTTTTGTCATTTATTCTCTGTTCTGTTAAATGCAC
ATCGGGGTTTTTTTGAAGTACAGATGGTCATGGTTAGTCTatttgtattt
tcttcagtCCATATAACttaattacacgcttttttataagaatacacttt
ataagaatgtccatgatgaaaatggccaaaaacatTAAGAATAATGTTAA
AATATCACCATGGTTAGTGTatttgtattttcttcagtCCATATAACttc
attacacgctttttttataagaatacactttataagaatgtccatgatgg
gAATGGCCAAAAACATTAAGAATAATGTTAAAATATCACCATGCTTAGTG
TatttgtattttcttcagtCCATATAACTTCATTACGTTCTACTAACCAC
AGAAACGCATCTCTGCCTGATTCAAATGTGATCTCTAGTCGCGAAAGGGA
ATTCCTTTTCctccaaatgaaaaaaaattgcgcgAGTATTTCAAACATAT
CTAGAGCAGTTTTGTACATTTCGCCAGAGATAGGCATGGGACGACTCGAT
ACAAGGtagtaaataaataataaataattgtGAGAAGTTCGGTACAAGGT
GTATTTGCTGACACACATCTCTTGCCTTTccagaaaagttttaaaaagtc
cTCTTTTTTCTGGAATACGGGGAAACTCAAAAATACATTGGCAAATATCT
AATAGGTAATTCAGGCtttcaatatttattcaatagATTAAGTAATTAAT
AAATTTTGGTCTAATTTTTCCCGTAATTATCAAATTCAATATTGATAATG
AGACGGAGTTACTTCGCAAATTTGAATcgattgaaaaatgattaaaaaac
tCGCTCCGCATATTGACGTTTTTCCTGAAATCTCCAATTTCATAGTGTTT
CCTGATGGATAGATACTGTGGTGGAGCAATCCCTCTCATCAAACAAAAGG
GGAAAATATAATCGGATGTTATTAATCATAGCCTTGATTAGCACGTACAA
TGATGGCATTTTGTGTTCtcttattttgttttattttgttcaagTGTTAT
GATACGTACACACATACAAACATATATGCTAGGAGAAAGTCACTTCGAGG
AGTGAGAGAGAACTtttgtttgaaagaaatttcattgATGTCTTTAATGG
AAGCTTTCTATTGCTAAGCATCGTCATGACTGTCAGAATATTgcgaaaaa
actcaaaaaactctCTGTGTAGGTTCTTATTGGTGATATTATAACTATTT
CTGTTGCTAAAAAGAATTGTTGGTTAATTCATTCATTTCTTGTGTTCATA
ATTTTATTTAGTAGAATACCAAAGAATACACATTGTCAAAATGTTCATTT
ATGCAAGTTTTTTTTCGATCGTTTTATTTCTTCGTGCTTCTTTTTCAGAT
TCGCGTGTCGATCCGTCCCTTCTGGAAAAGGTTGGCAAACTCGAACGTCA
ACGCATCGCTGATCAACTTAACGAGCGTCTTCTTCAACGTCCTGGTCCCA
TCGAGCTTATACAAGATCGAATCCTTCCTGTCGAATCACCCATACAAAAT
GCTATCGACCAAGGCAGTGTAGACTATCAACAGACCGTTTCCCCCGCTTC
CTCACACGCGGATTCGCCTTCCGTCTCCGAATTAGAGACAGGAATTCACA
CTTTGAATTGTACTTCACCTTCACCGCCCCCTCCGCCACATTCAACGCCA
CAAGTTCCGCCCTTACCGAACAATTTCTCTGATGTATCCTTCAAAAATCA
ACTTAAAACCGTTTCCGAATCGGGGAAAACTTCAAACCCGTTATTCGTTT
CGGATTCGTTTAAATCTGCACACTCTATATCACTCTCACAACGTGAAAAC
GAACGTCTCGTCAAATCGGTCAATAAAAAAACACGTCAACAGAAAccgaa
agtaaaaaaattgaaattccacGAATGTCTACCGGGGTCCGGTACCGTGA
AAAAAGTGGAGGCGGAAAGTGAGGTCGTAGATGAGCGATACCAGAGACTT
TTGGAGCAACAGACTTTATATTTACGCTTACAGGTGATGCAACAGAATGC
TGTTATGAACGCTCTGCAGGGCAACCCAGAATCCATGGATCAAGTGAACG
AAGAAATTGAACACATGatgcaaaaagaaaataataaaacgaACGATACC
AATATTAAATCAATAGACGGTAAAAAATTGGACGATTTACGAGTTGTCGA
TTTAAGAGCGCAACTCAAACATCGTGGACTCTTAGTATCGGGGGCAAAAG
CCAAATTGATTGAAAGACTTCTAGCGTTTGAAGAAGGGAAGTCAACTCCC
GCCGATTTCGCTTATTCGGGAAGTAATTTATCTCACGATGCCAGTATTGT
GGCTAGTAAGACCACGTCCACTATGGTCCCTTCAACCACAGTGATGCAAG
TAGCAACTTACGCTACAAACAGTGGTCAAACATACCAAGTGGTACAAACC
GTCCCACAATCCTCTCCCAGCATCATGCAATACCAGGTCGTCCCTGCTAC
CTCTTCTTCCGACGAGCAACTCTCTAGACTGGATCAAGTCAACACGGTTC
CTGTGATGGCCCTCACACAGCCTAGTGTAATGTCAGTTCAAGAGAGAGTA
AGCGACAAGCCACTTCGCGCCCAAGCAACGCCCTCACCATCGCACATCCA
ATTCCATATCACTCCCCCGCCTCAACCACAAACGCCCACCATCGTTCTCC
ACTCGGGGCCGCCTCTGCAACAAGCTTCCCTCTACCAACGACAGCGACAA
CAAAAggtcaaagttcaaaaattacCTGTCATCAGTCAAGGCCAGTGTTT
CGATCTTTCGGAAAGCAACTCGCAACCGCTCGGCCTCTCACAGTCCGTAC
CACCCATGCAACTGAACAATAATTACTTGATGGAAGCGAACCAATGTAAT
CTCAACTACAACACATCTCTCAGTAATTCTTCCCTTCACACAGACGTCAA
TGCAGACAACGACCTCTTTAACAACCCCTCAACGCAATTTCGTGGTCGTG
CATCCAGTGAACCGGCTTCTCAATTGAAGAAAATGCATCCACTGAAATCA
GATAGTACTAAATCAGTGTTTAGCCACCAACAACAAGACCTTTCACTTCA
ATTCCCTAAAATGTCACCCTCTCCGTCACTGAGCCTCAAAGATCATCACC
AACTACCCGTAAGTTCAACATTCCCGCATCTacaatatattgagaatttc
agttttttaacgtttttcaagatttaaagtcccggcgagaaagtcgattt
tgggctatctctttaatctaattgaatatttcaatttgggaggggtcgtc
agacttccaggctatattctgagccttattggactatctttgaacttttg
gatcttcAGATCCTAAAGTCGTAAAtgttaagtctagcgttaaaactcag
agttaaaactctacccttcgaacctactttagagcactttcaaatcgatt
gtggttcacttcccggtgaatttcccttttttctcaaatattatgacctt
gattgtatttCTGTGTTTTCATCGTCGTTAAATATTGATGACTCTGCTAC
AATGTTCAACGAGAAGTTGGGTGGGTTTGTTCAACGAGTGAAATCGTTTA
TCTGTCTGGTCTGAAGTGAATTTACGACTAACAGTTAGAGTGTAGCtttt
aaaatatgtaaaaagatgACTGTACCACATCTTGCAGATGTTGTATAACT
CTGCTGATAACAGAAGACCATTATCTCAAATATTGCCATTCTCTCCATCA
TAACTTATCTCCACAATATTTTGCTTTTTAGAATTCCATCAAGTCTGAGA
ATATGGATGACATTATGGACATTATTGGAGGTcagcttttttttttcatc
gctCTATTTTCTCCTGTTGTGTCAAATTTGTACACGTGAACACCAAACTT
AGTCTTCTGAGCCCAAACCACCTTTTTCCCCATTCCACAAAATCTACATG
AGTGAAGAATCAGTATGGTGATGACATTGAGTGATTTCAATTTAAATGCT
TTTGAAAATCGTCCAATCACAAGACTAGAAAGACCTTTCAATCAccaatt
tgaatgtttttgaaaatcgtcCAATCACAAGACTAGAAAGACCTGTCAAT
CGCCCGATTCGTTAGTCGACAGGTTACCATCAATTCTAGCGCCGCCAGGG
GATTGGGTTCAAGTTTTTTAGCGTCTGTTGTCTTCAAGCGAGTTTATTCT
CCAGACATATGACGACATCCGACCATGTTAAATTTGGACTCAACCCCCTT
GATGGCTTAGGGCTTGATGTGTGGATCGCATgacatcaattttcaattta
ttgaagAGTTCTTTCTTGTCTGGTTAACAGGAGATGTGTTCAAATTAGTC
ACGCTTGAACGACTCGCGTTTTTTGTGATCAAAACCTTTTAGCCACTGAC
ATGTTCGGTCAACACACCTGTAGGTGATCAAGCCCCCTAAAATGGACCGA
CTTTCGCTATGAGCTCACTACTAACTTTCCATGTATTAATTTTTCAGAAC
TCTCCTCGTCACCAGGCCTTATGAAAGAACCGCCACCTCCTTACAACTCG
TGTTACTATGACAACAAGAAATTACTGACGGAGCAAAAACCGTTCAACAC
TCCGGACGCGCACGATTTGAACCTTTTATCAGGTTCGCCTTCACAGAACT
TTTTGAACAATTCTTTTTATAACACGGCTGGTTTTAACACCTCTTCCTCC
ACCGGAAGCATCCCGCAACAAACCTCACCTACGCCTTTCCGTGGAACCTC
TCCCTCACATTTCATGAACACGGCGGCGCTTTCACCCACCAACGCCACCA
CGGATGACCCAATGGAGTTGGACCGCTTTCCCTCACCAAACATGATGGCG
TCCAACAATTCTTTAAACTGGCTCGACCTGAATATGGAACCAAATTCTCC
TAATATGAATTTTCAGACAATAAAAGACAATAATACTGCGAATACCACAA
ATTCAATGAATATGGATCTTCAGAATGGGATGTTTAGCAACGAGCTGAAC
AACCAACAACAAACTTTATATAATAATCAAAACAGACAATCGCAGAATTC
TCTGTTTTACGGTAGCAGTCCTCGACAGCAAGATGgttttatttcacttt
ttgatctCGAGGGAGGCGAATACTAACTTAACAATTTTTCTTCAcacgca
aaaaatcaaaaaattctgtTCTTTCTTTCTCATGTAATGAAAATGttgta
taaattttttttaatttaatatttttttctcaagaaataGTCTTTTGTTT
AATTTTCGTAATNTCAGAGGACCATTACCTCAAAGATTACCATTCTCTCC
ATCATAACTTATCTCcacaatattttgtttttagaattcCATCAAGTCTG
AGAATATGGATGACATCATGGACATTATTGGAGGTCagctttttttcttc
atcactTTATTTTCTCCTGTTGTGTCAAAATTGTACACGTGAACCCTGCG
TGAACACCAAACTTAACAGCCTTCTGAGCCGAAACCACCTTTTTTTCCAT
TCCACAAAATTTACATGAGTGAAGAATCAGTATGGTGATGACATTGAGTG
ATTTCAATTtaaatgcttttgaaaattgTCCAATCACAAGACTAGAAAGA
CCTGTCAATCACCCGATTCGTTAGTCGACAGGTTGCCATCAATTCTAGCA
CCGCAAAGGGGTAGGGTTCAAGTTTTTCAGCGTTGGTTGTCTTCAAACGA
GTTTATTCTCGTACATATGACGACATCCGACCATGTTAAATTTGGACTCA
ACCCCCTTGATCGCTTAGGGCTTGATGTGTGGATCGCATgacatcaattt
tcaatttgaagaGTTCTTTCTTGTCTGGTTAACAGGAGTTGTGTTTGAAT
TAGTCAAGCTTAGATGACTCGCGTTTTTGTGATCAAAACCTTTTAGCCAC
TGACATGTTCGGTCAACACACCTGTAGGTGATCAAGCCCCCTAAAATTGT
ACGACTTTCGCTATGAGCTCACTACTAACTTTCCATGTATTAATTTTTCA
GAACTCTCCTCGTCACCAGGCCTTATGAAAGAACCGCCACCTCCTTACAA
CTCGTGTTACTATGACAACAAGAAATTGCTGACAGAGCAAAAACCGTTCA
ACACTTCGGACGCGCACGATTTGAACCTTTTATCAGGTTCGCCTTCACAG
AACTTTTTGAACAATTCTTTTTATAACACGGCTGGTTTTAACACCTCCTC
CTCCACCGGAAGCATCCCGCAACAAACCTCACCTACGCCTTTCCGTGGAA
CCTCTCCTTCGCATTTCATGAACACGGCGGCGCTTTCACCCACCAACGCC
ACCACGGATGACCCAATGGAGTTGGACCGCTTTCCCTCACCAAACATGAT
GGCGTCCAACAATTCTTTAAACTGGCTCGACCTGAATATGGAACCAAATT
CTCCTAATATGAATTTTCAGACAATAAAAGACAATAATACTGCGAATACC
ACAAATTCAATGAATATGGATCTTCAGAATGGGATGTTTAGCAACGAGCT
GAACAACCAACAACAAACTTTATATAATAATCAAAACAGACAATCGCAGA
ATTCTCTGTTTTACGGTAGCAGTCCTCGACAGCAAGATGgttttatttca
ctttttgatctCGAGGGAGGCGAATACTAACTTAACAATTTTTCTTCAca
cgcaaaaaatcaaaaaattctgtTCTTTCTTTCTCATGTAATGAAAATGt
tgtataaattttttttaatttaatatttttttctcaagaaataGTCTTTT
GTTTAATTTTCGTAATTTTCACTTCTTTACGGtaaaaaacttgttttaaa
agttattgaaaattaattaaTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013888XLOC_013888Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024731-exon-sc0000509-1491911889:143573..143645TCONS_00024731-exon-sc0000509-1491911889:143573..143645Clytia hemisphaericaexon
TCONS_00024731-exon-sc0000509-1510915933:143573..143645TCONS_00024731-exon-sc0000509-1510915933:143573..143645Clytia hemisphaericaexon
TCONS_00024731-exon-sc0000509-1575043694:143573..143645TCONS_00024731-exon-sc0000509-1575043694:143573..143645Clytia hemisphaericaexon
TCONS_00024731-exon-sc0000509-1491911889:145439..145500TCONS_00024731-exon-sc0000509-1491911889:145439..145500Clytia hemisphaericaexon
TCONS_00024731-exon-sc0000509-1510915933:145439..145500TCONS_00024731-exon-sc0000509-1510915933:145439..145500Clytia hemisphaericaexon
TCONS_00024731-exon-sc0000509-1575043694:145439..145500TCONS_00024731-exon-sc0000509-1575043694:145439..145500Clytia hemisphaericaexon
TCONS_00024731-exon-sc0000509-1491911889:145733..145811TCONS_00024731-exon-sc0000509-1491911889:145733..145811Clytia hemisphaericaexon
TCONS_00024731-exon-sc0000509-1510915933:145733..145811TCONS_00024731-exon-sc0000509-1510915933:145733..145811Clytia hemisphaericaexon
TCONS_00024731-exon-sc0000509-1575043694:145733..145811TCONS_00024731-exon-sc0000509-1575043694:145733..145811Clytia hemisphaericaexon
TCONS_00024731-exon-sc0000509-1491911889:148571..150330TCONS_00024731-exon-sc0000509-1491911889:148571..150330Clytia hemisphaericaexon
TCONS_00024731-exon-sc0000509-1510915933:148571..150330TCONS_00024731-exon-sc0000509-1510915933:148571..150330Clytia hemisphaericaexon
TCONS_00024731-exon-sc0000509-1575043694:148571..150330TCONS_00024731-exon-sc0000509-1575043694:148571..150330Clytia hemisphaericaexon
TCONS_00024731-exon-sc0000509-1491911889:150954..150983TCONS_00024731-exon-sc0000509-1491911889:150954..150983Clytia hemisphaericaexon
TCONS_00024731-exon-sc0000509-1510915933:150954..150983TCONS_00024731-exon-sc0000509-1510915933:150954..150983Clytia hemisphaericaexon
TCONS_00024731-exon-sc0000509-1575043694:150954..150983TCONS_00024731-exon-sc0000509-1575043694:150954..150983Clytia hemisphaericaexon
TCONS_00024731-exon-sc0000509-1491911889:152537..152555TCONS_00024731-exon-sc0000509-1491911889:152537..152555Clytia hemisphaericaexon
TCONS_00024731-exon-sc0000509-1510915933:152537..152555TCONS_00024731-exon-sc0000509-1510915933:152537..152555Clytia hemisphaericaexon
TCONS_00024731-exon-sc0000509-1575043694:152537..152555TCONS_00024731-exon-sc0000509-1575043694:152537..152555Clytia hemisphaericaexon
TCONS_00024731-exon-sc0000509-1491911889:153174..153994TCONS_00024731-exon-sc0000509-1491911889:153174..153994Clytia hemisphaericaexon
TCONS_00024731-exon-sc0000509-1510915933:153174..153994TCONS_00024731-exon-sc0000509-1510915933:153174..153994Clytia hemisphaericaexon
TCONS_00024731-exon-sc0000509-1575043694:153174..153994TCONS_00024731-exon-sc0000509-1575043694:153174..153994Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000509supercontigsc0000509:143573..153994 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.17767	7.21461	3.11665	5.31178	11.3518	8.8719	14.3854	13.7904	10.0625	16.9627	6.8852	12.2691	10.9214	14.2437	19.7341	25.5713	13.9454	12.4809	11.8671	12.3812	2.04543	5.30444	12.1539	7.21253	15.7878	15.4701	11.43	7.37384	13.3373	13.1266
Blast
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BLAST of TCONS_00024731 vs. Swiss-Prot (Human)
Match: MKL1 (MKL/myocardin-like protein 1 OS=Homo sapiens GN=MKL1 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 4.033e-20
Identity = 50/102 (49.02%), Postives = 74/102 (72.55%), Query Frame = 1 
Query:   91 TPAIFNKVAQ-LERKKTGDFLTKKIRARPSRQQLIQRHILSADSRVDPSLLEKVGKLERQRIADQLNERLLQRPGPIELIQDRILPVESPIQNAIDQGSVDY 393
            +PA F++  + LER +T D+L +KIR+RP R +L++ HIL  ++  +PSL  K  KL+R R+AD LNE++ QRPGP+EL++  ILPVES ++ AI  G V+Y
Sbjct:    6 SPAAFHEQRRSLERARTEDYLKRKIRSRPERSELVRMHILE-ETSAEPSLQAKQLKLKRARLADDLNEKIAQRPGPMELVEKNILPVESSLKEAIIVGQVNY 106
The following BLAST results are available for this feature:
BLAST of TCONS_00024731 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MKL14.033e-2049.02MKL/myocardin-like protein 1 OS=Homo sapiens GN=MK... [more]
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