TCONS_00024746 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024746
Unique NameTCONS_00024746
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length314

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024746 ID=TCONS_00024746|Name=TCONS_00024746|organism=Clytia hemisphaerica|type=transcript|length=314bp
CAATATAACTCCTTAAAAATGCGATCAAGTTTTGCGGGGACTCAATTTTT
TGGTTAACACTATTTTAAGATAATACTTAAACAGTTTTTATGCTTCTTCG
GTACTAAACTGGCAAAACCTTATTTGTTCTTGTAGGAAGCTTTGATGGAG
GAATACAGCATCGCAGCGCAAGTCTGGAAACTTTCACCAACATGCATGTG
TGAGTTGACCAGCAACAGTGTTCGGATGAGCGGCTTCGAACATAaggtaa
caaaattttaaatcgTGGGTATACCCGTTCTTTAGAACTTTGGGGCTAAA
TTGTACgatatttt
Run BLAST on NCBI

transcript from alignment at sc0000509:661..974

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024746 ID=TCONS_00024746|Name=TCONS_00024746|organism=Clytia hemisphaerica|type=transcript|length=314bp|location=Sequence derived from alignment at sc0000509:661..974 (Clytia hemisphaerica)
aaaatatcGTACAATTTAGCCCCAAAGTTCTAAAGAACGGGTATACCCAc
gatttaaaattttgttacctTATGTTCGAAGCCGCTCATCCGAACACTGT
TGCTGGTCAACTCACACATGCATGTTGGTGAAAGTTTCCAGACTTGCGCT
GCGATGCTGTATTCCTCCATCAAAGCTTCCTACAAGAACAAATAAGGTTT
TGCCAGTTTAGTACCGAAGAAGCATAAAAACTGTTTAAGTATTATCTTAA
AATAGTGTTAACCAAAAAATTGAGTCCCCGCAAAACTTGATCGCATTTTT
AAGGAGTTATATTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013901XLOC_013901Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024746-exon-sc0000509-1491911889:661..974TCONS_00024746-exon-sc0000509-1491911889:661..974Clytia hemisphaericaexon
TCONS_00024746-exon-sc0000509-1510915933:661..974TCONS_00024746-exon-sc0000509-1510915933:661..974Clytia hemisphaericaexon
TCONS_00024746-exon-sc0000509-1575043694:661..974TCONS_00024746-exon-sc0000509-1575043694:661..974Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000509supercontigsc0000509:661..974 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.68897	1.64701	5.73702	10.8514	53.2975	52.9155	50.3774	38.6246	17.6485	18.6872	15.7426	14.623	26.7341	22.6308	19.7565	21.4076	47.166	37.4273	14.7224	20.6665	23.8417	22.4618	21.6892	24.2962	51.8624	57.9384	16.6746	12.358	53.6143	42.0188
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00024746 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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