TCONS_00024761 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024761
Unique NameTCONS_00024761
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1338

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024761 ID=TCONS_00024761|Name=TCONS_00024761|organism=Clytia hemisphaerica|type=transcript|length=1338bp
GATTTTTAACGAGACTTTTGGGAGAACTGTTGTTAAAAAAGTTTATATGG
AAGGTCTCTGATTTACAAGCATGTACAAAAGGATGTCGTTTGCAATACAT
TTCACATCTGTCAAGAACCAAAAGTGATTGTGCAGAAGACTGCACACATG
CATATGGAAAAAGCTTAAATGAGAAAAAAGCGTGTCAAGAAGGATGCCAA
GAGCAAAAAGCTTTGGATTTGAAACCCAAAATGTTGCAGGTCGAAGAGAC
GAGCGACTTGACATTCCATTTCCGCTTGCTTCACCCGATCTTCGTGGCGA
GGAATTATTACTATACCTTGTTCAACAAAGAAAGCCAGAGCGAAGATGGC
GGACGAAGGTCTAACAGTTTCTATTTTGCTGAGCAAGCATCTTCTGATGG
TAAAGGGAACAGCATTTTCGTTCGACTGGAGATGCACCCATTGAAGATTG
GTAAATATCGAACGTTCGATAGCGTGGAGAATGACGATATGGAAGCTGAA
ACTGTGGAGACGCACAAAACTGAAAATACCGTCAATGAAGGATCATCATC
GTCATTCAAACATTACGTGAAACATATTCACAGTAAAGCATCACGATGGT
TGAATTGTGTGGAGATGAAAGCTGGTGTACCGTACACCACCTTGATGGCT
ATCCTTTTCATGTCACTGGCCATGGTGGCGTGGGTGTGTTGTTCCACCTG
TGAAGAAGATGACGAAGAAACGGATGAAGAAGAACATGAAGTGCAATCAG
CTGTTAAGCGTCACAAATTCAAGTCACCAAAAGGAGGAttatccataatg
gcagacaaGCTTCACTTGGACAAAGGTGGTGACGtcaaaattttcacaat
ttCTTCATCAAGTAAAAAGAACGATCATTGTGACAAAGACGATGATGAAA
GACTTTTACAAATTTAAATCCGACtctcaattttttcactttcactttta
acatttaattttcatttgatttggtGCAAATTTAGGGACAATTATTGATT
GAAGAAGGGCCAGTTTTCAGTAAAAATATCCTTGGTATCCTTTCTTAATT
CATCTGTATATAATTTATTATTATCGTAACTTCACTGTTTCgaatttctt
tgtgttttctgACGCTCTATCGAGGGATTTCAATTTTACTTAgcagtaaa
attatttttaatttaatcttttttaaatcgcagCTATTATAAGCTCTGTA
TGTAATagattttgtttaaattttcgAGAAGTCATTTTTTTGGTTGTATA
TAGCAAATATACTCTCTTATTATTATTGttgtataattgtttttttgtaa
aaatttagaaaatatatcaaaaaaaaattaaaactgcA
Run BLAST on NCBI

transcript from alignment at sc0000510:3320..15828+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024761 ID=TCONS_00024761|Name=TCONS_00024761|organism=Clytia hemisphaerica|type=transcript|length=12509bp|location=Sequence derived from alignment at sc0000510:3320..15828+ (Clytia hemisphaerica)
GATTTTTAACGAGACTTTTGGGAGAACTGTTGTTAAAAAAGTTTATATGG
AAGGTATATGGGAGGAATCGGGATGTCCTTTGATTGGAAATTATTCCTGT
AATTTCTATTCATTGATCCTAATCATGCAGTAGATTTTGGGTCaattttg
actttctttttgGGTTTTTGGAGATTAGATTTCTTTAACAAAATTAATAG
GCACTGTAATCCACTAAGCAAGCTAATGACCATTATGTAATACATATGGA
TTTTACTCTGAAGAAAGTAATTCATTTGCATTGAGATTTAACTAGCTTGT
tggattttttgaatattttttagtatGAAACATCTTCTATTGATTTTTAG
GTCTCTGATTTACAAGCATGTACAAAAGGATGTCGTTTGCAATACATTTC
ACATCTGTCAAGAACCAAAAGTGATTGTGCAGAAGGtgttgttttttaat
tgttgGCATAGGAAATTAAACTTTGCACAGCCTTTTTAATAACTCCATTT
CCAATGGCCAAGGGAGATGGTGAAAGTTCTTGGAAACATTTTATATGTac
gtgaagaaattcaaagaatttctgtccagcTATCTTtattcaggagattt
gggtggcagggcagcatatgcatttcgtccttattaggacttgccagcac
tgcatactgcaccctggctaggcagatcgaattgcatatatatttaatat
aattgaATATATATATAAACATTCAAGCTGTCTTTTACTGCTAAAAAGAA
AGAACTAAcctccaaatttcaaaaacagaATCTGTAATCAAATTAGCAAA
GAAAAAATCGATTGTTGTTTTTGCTCTATCTATGTCTCGAGTTGTAAATG
TTGATGAAGGCTTCTTTTAAAATCTAATCATCATCGTCAACTAGTCAACT
TGGCATATTTAAAAAAGTCTACCCGATCCTTTCATAATCTTTCTAGACTG
CACACATGCATATGGAAAAAGCTTAAATGAGAAAAAAGCGTGTCAAGAAG
GATGCCAAGAGCAAAAAGCTTTGGATTTGAAACCCAAAATGTTGCAGGTA
AATTACTATTAACTATTATTATCTATTTGCGTCAAAGTAGACAGCAATTA
TATTAATGTAATTTACACAGAAACTGCTGAACTGCATATGATTTCAGGAA
ACAAGTAATGATGACAATTAATCATGAATGATTCATTTATTTGTTTTGTC
TTGAGTGAACtcaaatgattttcttaatgTTGTGGGATTACATCCTAATG
TGTAGTTATTTAGGATGTTGGATTGTGTTCATTGAAGTTAATGACCTCTG
TCACCCTCTCAGCAATTATGTATGATCCTAAACAATGCAATTTTTCTTGT
TCAATAATATGTTAATATGTACCCCAACAGTCTCTGTAGTCGAAATGATT
GAGTTGACTAAGCAACAGTTTGTTTGATATTGATAAATGGGTGCAAATTG
AATAAGTATTATGAAATGCATAAGTCTAAAGTGATTCAATTAGAATAgta
tacattgaaaaaaaagtttgattgagTAAATGAAAATATCTAAGTTTAGT
ATgcaaattatacaaaaatgaaaattccaaGATGGCTGCCAAGACCACAA
TGACTGAACTAAACCTAACCTAACCTAACAGTGCTGCACTCCCGCTGCAC
TGCAGTACAGGGACTGCCTATCTTGTTCACCCCCTAAAAGAACAGTTGCC
CCTTACTTTCATCATTAAATTTTGATGCAAAACATAAAAAGCTTATAAGA
TAGCTTTACATAAAGTGTGTTGTGTAATAACTGTGTATACGCCAacgaaa
atcataaaaaagaaataagtttatacctaaactactCTATAAGTAGAATA
ATAATATTGTGCAAATATGAGCGTCTTAAccagattgttcttaaattgct
ttttttgcCATGTGAAAGTAGTTATGAAAACTCTTGAAAgagttaaaaat
gttttcaGGAAAAAGACAACACAATTATAACATTAGATAGTATATATTGA
TTGAATCATAACATTTGATGCTTTGGTAAGCATCTTAGGGTGTTGATAAA
ACAGTAATACAAATATTATTTACAGTCATATTCTTACATTCAGTAATTTC
TATCCAACCGAATCTTCCCGGTTTAACATGAAATATGTAGCAATTTCAGC
ACTTTTATAGACAACgttcaaatcaaaatatgatGATAAAATAGAACAGA
ACAGTTTTTCAAAGTTGTACTAATTCTTTAGTCAAAATGCTAGCATCACA
GATTCTTCACCAAAAATATTCCTTTGCTCGTTAAAACTACAAAATGATAT
GCTGAGAAAAAGCTATAATATTGTGCTATCTTCAACTATATACAACCACA
ATTGGATTTTCTTGAGTTCAGCATGTTTGAATGGTGCTCCATATCTGTAC
ACCGGGCGTCGACTGCCTGTGTCAACTTCAACCATTTGACATCAATTGAA
CCCAATCTTTGATCATCGGGGTTTGATTGACTAAGGGCTCCTTAATGTAT
TTTTATAAGGATGTAAtattgtgatatttttttataccaTACTTCGGTAC
CGGGGATTTATACAATCGAAACAAACAACTACAAATTAGAACACCTCAAT
TTTGGCTGAGgttggatgtgcttattttcttGGTAATTTCCAGCCTAACA
TGTTCATAAACACGTTCTTAATTTTCGTTCAAATTTAGAAACTCTAAAAA
CTGGGGAAATGGCTGCGAATTTTAGTGGTTCCATCTAGTGTCTTATATAG
GATATATGTGATATCACTGCAGCAATCAGTAAACCATGATTTCAGCTAGA
TTTATTGCTCTTATTAAACCAATATCAAGTTGAAGTAACTCCACGTTTCG
TGCTAAAAGAGGTTTAGTACATCGAGCCATATATATTTCAGCTCTAGTAT
AACCAATGTGAGTACATAACCTGCGATTGTCATTAGGGTTCCCATTGTTA
AAGACATAAATATCATTATGAGATAGACGTTCTAATATGAGTATATAGTT
AGCTGTTTCAAGTATTCGATTATGTATAACAAGGAATGTTATGATTTTCA
GTGAACCAAGATCGATGCGGAGCCAATTTGAATATTCCATGCCCGTGTGA
CAAACTGGAACGTCGGGTCCATATGTTCCATCTGTACAAATTGAACCAGG
CCTGATCACATTTGAAGAAGTTGACATTGATACAGTTTTATGTAGGGCCA
TGTTATctataaagaaatgaaatttgacaTACCGTACTACATGGCTAGGG
TCTCTTACTAACAAGAAGGTGTTATAGTTTCCAACCTCAGCAGACTTTCG
AGTATCGATTTTCTTTCACGcactttttttcataaaatctttatcaaatt
tcTCACGAtactacactttttttaataagcaaccaCAGGTTTGGAAGACT
GGAGGGCtcaaatttagcttttttttcactatctcgtaaagtaaaagctt
ctTGGATGATCTAAAGGTGCTCTTGGCCTAATAACCAtgaaatatggtat
aatatcagggatggtcaaagcaaattttttagaaaatgagctagaatgcc
aAGCAACCCCTAGAccgacccgaaaattggagtttcCTATAAAGAGTGTA
GCTTGTTAGGCGAATACTGCTTTTTTATTTCGCAATAGATCAGTTAGTTG
GTTGATGGGAATGTACTGGACCATTTGAGATTTTCATGAGAACATTTACG
TATAAACTGTTTACAAGTCACGGAGAGACGATACCAACACTTGTTTTATA
AGAAAGCCAGATATAAACTTGACTTGAGCACTGAGTGATTGTACGTTGTG
CGTACAAAAGAATGCTTTActgtatttatttattttgaagttcGTTGAAG
TCACCTAGTAACCTACCTGTCAGTTCGAACATAcaacacccttacagtgc
attttgggaagcCTGAAAAACTTTGGGATTGCATCTACGTTACCTCGCTT
TACATTGAGTTTTATTGTATTAGAAACCTACCTGTAAGTTCGAACATACA
ATGTTCATCGTAGGTTTGAAACGGACAAACACACTCGTGAGTTCCATTTT
GATAATCAGGAATACATTTATGGTTTGGATTGATGCATGTCTCATCCCAT
TCACAATCATGCTAaaattttgtgagaaaaattatttttattgatgagct
tattgaaatttaacttttttaaattctttatcGAAAAATGAAGATTGACA
GTAGCTGAGTCTtttcatagtcattataaaaaccaaggtctggaaggctt
ttatctcttttttaatgtttttaaaggacggagcttacgtaccaaaatcg
atttattttgcaaactttttgatcatgtgattagtaAATAGACCAATCCA
AAGAGGAGATTTTAGTAACGTGATcagaaagtatgcaaatcgtaagtttg
taacaaaagaaaattgaacaaaaaactaaaacaagacattgccagaccgg
ggttttttataatgactatggtctTTTTACCAGTGCGTCATGGTAAAATA
ATGGATGATTTGATTCGGCCACCTGTCTACTTAGTATTTCACTCCTCCTT
TTCGAAGAAACAATGACTTACTTTTATTGCATAGTGAGTGGATTCTGTCT
GTGGGATGAAGCTTGAAGAATTTCTGAATCGATCAGTATCAAGAAGTTGA
CATTCCAAATCGCCATTTTGTTCAATAATGACATTGACACTGTTACAATT
CTCAACATCGATACAGTTAGTGATGCATTTAGCAGGTGAAGTTGTGTTGA
TTGTAATTGTTTGTAATGCAGTCACATTGAGGATGTGATCTTGATGGGCC
ACCATATTTGCGTATCCataaaaaactgaagaaaaaagtgttATCTGAAT
AATATATTGTCGCCGTTTTAATCAAATTAGTACTAGTAAAAGTAAAcggg
agtctctataactcgaatgcacaatgaaaacacaaatttgttcgagttaa
ggaaatttagatatatggagtaaggtttataagacattgttaactgaaag
gaccgtaaaacttgttcaagttaaagagacattcgagttatagaggttcg
agttaaagagactccaatCCACACCAGTTGAAGAAACTCATTCCACAGAA
AAGTGATTAACTTGCTCCGTGGACCAATTTCGGGGCCTCCGTCCCGGATA
GggaacgggggtccccgaacgGTCCCCCGGATTTAGTACGATTAAAGACA
AGAAAGATCTCCTTACCATTTTTGCCAGATATTTGTGAAAATCTTCTGAT
TTGTTGATGTTGTCCACAAGTCGTGCTCAACAACAACATCCAATATATAA
agattgagcaaaaaatcatcatttATATACACCTCCTCTACGCACGAACT
TGTGTCAATAACTAGTCTCAGTCTTCTATGGAAAAAAGTGTCAACGAGTT
TGAAACAATTTCAtcgatttcgaaaattttttttaaatagttcaCTTTTT
TATTGAACTAACTTGAATCAATTTAAAACTAGTCTTTCATTTGACTAGCA
ACATCAAAACTTTCGTGATCTGTTTGACCATTCCATTAagtttccataca
gggggtggacgaaccttttcaagtaaaaaaaaattttgaaaatgtgtgga
tacatactgaaaaatgacaaaatttgaaaaaagacccttttttcttttca
taccaTAAAGTGatggtggacgaactaaaatcagtctttaacctcctgaa
aatatttttagtatcccttggaaaaatgaaaaacactctTTTAGACCCCC
caggaaatgttcgtccacccagCTGTatagatataaaatggaatgaccca
TGTCATGGTTTCATATTTGAAGATGGTATAGAGaattaaaatatgaatga
aattGTGGTTGAATTATTCTTCGTTTAAAGAAACTCCTTTAaataaataa
gagtgatatcgtttgcttacttgccaattttaatttacaagctttttcac
atctgattgacacggatgtggtcAGAaatatatcagcataatataacaat
aggcagacactgacctgatatgaaatatgtgtctgatatgaaacgggaac
acttgtgtaaaaacaaaaactttaataTCTCAACCcctgttctttttttc
attagaaCTTGATTAATCCAATACGTTTTGAATTCTAGATTGTCCGTAAA
TATTGGCGATAGATTTTAAATAGTTGGGCGAATCGTAAAGTATGACGAAG
ATTGTTTGAAATAGAGTCTATTTTGCTGTCCATTTAGCTCTGCTTTAGAC
GGCCCTGGACGGCCAACTTTTCACACATTCTATTTTGTGctttcttttga
cgtcaatggaattactttttaaaatattctcaaagtAAAGATTTTAACTG
CAACTTTTTGCCAAATATCTCTCATTTATCCAAAAATGTTTCTTTGATCA
ATAATGAGCATTTTAACCAGTGGGGAACCGCTTTAAAGCAATTTTGTTCA
TATCAGAAAATCTAACCATTCCTTTCTTTTCTTAATGACAGGTCGAAGAG
ACGAGCGACTTGACATTCCATTTCCGCTTGCTTCACCCGATCTTCGTGGC
GAGGAATTATTACTATACCTTGTTCAACAAAGAAAGCCAGAGCGAAGATG
GCGGACGAAGGTCTAACAGTTTCTATTTTGCTGAGCAAGCATCTTCTGAT
GGTAAAGGGAACAGCATTTTCGTTCGACTGGAGGTaagcgctgttttttt
tttgttagtaGTCATGTACATACACAGAGACACAGGTTCTCATGCACCTA
GCAATTCCCCCTCCCCCGCTGCCGCTTATTCATCGTCTACAACGCCATCC
AAATAAAGAAACACGTTGTTTGTTGTGGCTTATGTATTATATTTTGACAT
AATGCTAAATCGGTCAACTTCACAACTGCCGGGGCTACCCGGTACAAGGT
TCGCCGTGTCTTTCTAAAATTCCCGTATTCTTTTTCGTAGTTACTTACTG
TTTTCCTAAAACAGTATGATTTTAACCCTAAAGCttaaaaataactaaaa
taaCTCGAACGCACCTATGCGTGtttatttgaattttcagaaacTCATTC
TTCGGTCCCTTGTCATCTTAACCCTCCTCCATTGGAATAATCCTCCTCTC
AAATGCTGTTGTCTCTTTTTAAGCTCTATAAGTGTTTTCTGACTTTTGTT
TAGATGCACCCATTGAAGATTGGTAAATATCGAACGTTCGATAGCGTGGA
GAATGACGATATGGAAGCTGAAACTGTGGAGACGCACAAAACTGAAAATA
CCGTCAATGAAGGTCAGTGAACACCTAAAGTTTTATCGTGGAGAATTTTG
GTGACATTTTTACGGTTCGCGTATTTGTCTCGTAGTTTGCGGGCTATGAG
AATGCAATCAATTTGCTTTAAAATTGCTCTAAAACTCGATATCGAAAATG
AAGTTAGAATGTCATTTTGATTTGCTAGACTGAGACTTATTTTCGGCTTT
ACATCTCAATAGTGTTGACTTCATTAATTACAACGAAAAAGTTATTGAGA
TGGAACGTTCTAGTAGAAACAAAAATGATATATTTCAACGTGGCTTAAAC
TGTAGTGAGAATGAAAGCGTCCGTTGTTGTTTTGAATTATGATCTGTTCA
CCACCTGATTAGTTCAACTACAGTTTATTAATATTTATCaggtttaaatt
ttgattttttgaatgaaCATAACTAActgaaaaaataggaaaattcattt
taaACGAAGATTGACATAATGTCGATAACGGtttcttttatttcattatC
ATCTTGTTTTGATGTTGCTATGCGACAGTTGTGAATGAAAATCCTTTTCT
GGTGGGAAAATGAATCatcgaaaaaaaagtgaaaaggaCTTTCATCCTTT
CAAACCTTATGTTCTTTGCCCTAATTGGGCAATTTAAAAGAACTCTCCTC
AAACAGTTTGTgttaaaacacccccttctcacagacccactgggatccCT
TCCCACTGTAAAGACAaaagccgcaaagatgcggatgaatatttccttta
caaataaataattactgtcctcaaaagatcaaagtgctttatctcagata
acatcaagcaacgcaagtccctaagaatttcaaaattccatttatgttat
tgccagtatttacaggattattcataagatgactaAGGTTCAAACCTACG
GATCACGGagtatatccaagctgaactcGACTGAGAATaacaatgcagta
atcaaattggctagacaacctttaattttcgttaggtggactttagTTGG
ATTTTAGTAATTATACAAGTCGTCACCCGGTGTCGCACCCACCGAGTAGA
GTGttattgaacacatcaaaagcccttggGATAGTGCATAATCATAtcat
tagtatatgtaatcacatgataacgagtgcaattcgaatataattgcacg
agtgatttttttgttattaattttccgagtccgaaaggacgagggaaatt
cgaaacaaaaaaaaatcacgagtgcaattttcgaattgtacgagttatta
tgtgattacgagctaatcgcacaatggctttcactactttttcccagtta
ggaaagtaaattacagaaattacactgagagttttatatttttctcttct
ctttatgtctttcttctattgttggacctaccttaaggtagtgtcctata
aattaacccgtgttcgttagttagttcgttagtacgttagttaccaactt
ttctcgagattggctcattcaattNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNaattttccggccggtagaaccgg
aaatgtcccgaaaaaagcggttttttgagattttctcgagattttatcat
tagttttttgcgattttttgcacatagatgcattttagtactgccgaaaa
ggtgttgtttattgattttctttctcacaaaataaatttcgaatgaaatt
aaaacgttcgatgcaaaaaaaacacattaaaatcaattttgtaaacattg
gcgcggcattgaagagtgtgattaacgattaattgctctctacaggatgc
aattaacgattaattgctctctttgagggcgtgccaaataagaaaaaata
acccatcgtgcgattattaTGTTAAGCACTTATTGCCGGAAATAAaatct
gaaatgaaagaatgacaaaaaggagagtATTTtacagtaagaaaaccaaa
ggaaattttatattttcaaaaggagattaaatattttgcatatactttca
tatataaaatattggtaaaaaggTAAAACTcaaagtaacttttggagtta
tattttttgaaatgcatgccAAAAAGGAATAACCTTTCAAAACAGAAtgc
gaaaaaaagaaatctcattATATATACTGGGAagcattttcataatctga
aagaatgtcaatctaggaaaaaattcccctaacagaagccattttatgat
ttccaataGCATGCTGCAAAAGAAAACAATGTCACATACTTGTAAACAAT
cataatttgcaaaaaaatgccaaaaagaaaaaaagttgtcatgccaggaa
atcacttaaaaaaattgtcaattgacaccagagttttcttcattttttaa
tgcatgttgaagaaaatctctaaattcacaacaaaagtttctaCGTTTTT
AAAACGCAGGTGGAAAAAAATCTCCACAACCAAAGTTTTAAatgcacggg
gaagaaaatctccaagctCAAGACAAACTTTAACTGTATATGTCTATGTG
AGGTGATTTCCAATTGTTTACAtccataccgtcaactgctctaacttggg
actatctgacaaaacatgagATGGCAATTCGGCTACCgtaccatttcacc
gaaccttcaaagttatttgatttgatttaatgaacggcgtattaaaaaga
aaaacgatttctctttcgcaccgagtaggctttgaaatcgaaatatgaaa
aaaatctagtGGAACACATGCGAGTGTCTGTGTGctctaagaggaacgaa
gaagtatgattgataaacttggcggagttatcaaaacaaatttgttgtag
AAGAGAATTAAGAGTAAACTCAAAGAGATTTATATACCCAgtataagtga
aaatacaggctaaatatcaaccagtcccatgtttcgaccgatcgtcccaa
gttagagcaattGACGGTATTCTATACAATAAACATTTTATGagttaaca
ttcttcatattggcgGTGGTGTTCCGGTTATCagcttaaaaagtttgaaa
ttacagTTCTGTAACCGCAACAGAAAATTCCCCACAaagagttttcacta
actgtcactaaccggttaattcattgttgtagatgaAAACACAAAggaaa
attcaatcattaaccagtcaacttttctccatgtttaaatttttagctca
aaGCTAATTAATCATATAGTTCATCACCATACCATATAAAAGtgaattca
aacttttttgatgtcgcaagtatgtaatttttcaggtataacatggtcag
attcaTTCACAGTAAAGTAAATATAcaagcaaaattgaagttagtttgtt
gtgaaagttaacaaaatgtcctgtttttccaagagaTTCTATCTTTAAAC
CAACAAAATGTAAACGaaatcaaatccagaaaggaatagTAAGGGAAGTT
CATCATCAACCCTTCCTTGTGTCAATCTTACAAAAATCATGACCCAATTC
AACTCatgaaagcataaaaaccaaagaaaaatagcgaaagagcaacactt
gttgtctattttttgccgccatctttatctTTAAGAGCAATGAACCTCAA
AATTgcccaaaaataagaacaatttaagaacaagaaTAGCTGAATTTAAG
TAAACTTTAGTAAGCCTAGAATACTATATTCTTGCCCTAGAAAAGAACTA
TCTCACGCTCGTATTGTCATgagtataaaataataaaagataAAACATTT
CATTATTTCGTCATTTCTTTTTAGGATCATCTNTAACAAAAGATAAAACA
TTTCattatttcttcatttctttctAGGATCATCATCGTCATTCAAACAT
TACGTGAAACATATTCACAGTAAAGCATCACGATGGTTGAATTGTGTGGA
GATGAAAGCTGGTGTACCGTACACCACCTTGATGGCTATCCTTTTCATGT
CACTGGCCATGGTGGCGTGGGTGTGTTGTTCCACCTGTGAAGAAGATGAC
GAAGAAACGGATGAAGAAGAACATGAAGTGCAATCAGCTGTTAAGGTGAC
CCTCATTGCTTCATTTTCTGCCATTTGCGAGTGCAAAAATCAAATGTTAA
GGTGGAGTGACCGACATCAGGCCTTCATTACTCCATGTTTTGTTATAACT
TTAAAGGCTGAAGTTTCTGGGCAGAAGGTTTTGTAAgctcaaaatttcga
aaatttatgTTTCgcgaattctttaaaaaattaatcattTTAAGAAACGT
CACTTGCTCTAATAAAAAACGTAAACCTTCCCTCTATGTAGCTTGTGCGT
GGCTTGCGTTGTAACGTTGCAATGATGTTGACATATCATAATTTTGAAGT
AGTTACGCGAAAACATTACCGTTTATTAAATGTTTCTGTTTAACAAGATT
GAAGAAAGTACCTTCTTATTTCTTTTTAGCGTCACAAATTCAAGTCACCA
AAAGGAGGAttatccataatggcagacaaGCTTCACTTGGACAAAGGTGG
TGACGtcaaaattttcacaatttCTTCATCAAGTAAAAAGAACGATCATT
GTGACAAAGACGATGATGAAAGACTTTTACAAATTTAAATCCGACtctca
attttttcactttcacttttaacatttaattttcatttgatttggtGCAA
ATTTAGGGACAATTATTGATTGAAGAAGGGCCAGTTTTCAGTAAAAATAT
CCTTGGTATCCTTTCTTAATTCATCTGTATATAATTTATTATTATCGTAA
CTTCACTGTTTCgaatttctttgtgttttctgACGCTCTATCGAGGGATT
TCAATTTTACTTAgcagtaaaattatttttaatttaatcttttttaaatc
gcagCTATTATAAGCTCTGTATGTAATagattttgtttaaattttcgAGA
AGTCATTTTTTTGGTTGTATATAGCAAATATACTCTCTTATTATTATTGt
tgtataattgtttttttgtaaaaatttagaaaatatatcaaaaaaaaatt
aaaactgcA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013914XLOC_013914Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024761-exon-sc0000510-1491911889:3320..3372TCONS_00024761-exon-sc0000510-1491911889:3320..3372Clytia hemisphaericaexon
TCONS_00024761-exon-sc0000510-1510915933:3320..3372TCONS_00024761-exon-sc0000510-1510915933:3320..3372Clytia hemisphaericaexon
TCONS_00024761-exon-sc0000510-1575043694:3320..3372TCONS_00024761-exon-sc0000510-1575043694:3320..3372Clytia hemisphaericaexon
TCONS_00024761-exon-sc0000510-1491911889:3670..3754TCONS_00024761-exon-sc0000510-1491911889:3670..3754Clytia hemisphaericaexon
TCONS_00024761-exon-sc0000510-1510915933:3670..3754TCONS_00024761-exon-sc0000510-1510915933:3670..3754Clytia hemisphaericaexon
TCONS_00024761-exon-sc0000510-1575043694:3670..3754TCONS_00024761-exon-sc0000510-1575043694:3670..3754Clytia hemisphaericaexon
TCONS_00024761-exon-sc0000510-1491911889:4266..4366TCONS_00024761-exon-sc0000510-1491911889:4266..4366Clytia hemisphaericaexon
TCONS_00024761-exon-sc0000510-1510915933:4266..4366TCONS_00024761-exon-sc0000510-1510915933:4266..4366Clytia hemisphaericaexon
TCONS_00024761-exon-sc0000510-1575043694:4266..4366TCONS_00024761-exon-sc0000510-1575043694:4266..4366Clytia hemisphaericaexon
TCONS_00024761-exon-sc0000510-1491911889:9811..10002TCONS_00024761-exon-sc0000510-1491911889:9811..10002Clytia hemisphaericaexon
TCONS_00024761-exon-sc0000510-1510915933:9811..10002TCONS_00024761-exon-sc0000510-1510915933:9811..10002Clytia hemisphaericaexon
TCONS_00024761-exon-sc0000510-1575043694:9811..10002TCONS_00024761-exon-sc0000510-1575043694:9811..10002Clytia hemisphaericaexon
TCONS_00024761-exon-sc0000510-1491911889:10473..10581TCONS_00024761-exon-sc0000510-1491911889:10473..10581Clytia hemisphaericaexon
TCONS_00024761-exon-sc0000510-1510915933:10473..10581TCONS_00024761-exon-sc0000510-1510915933:10473..10581Clytia hemisphaericaexon
TCONS_00024761-exon-sc0000510-1575043694:10473..10581TCONS_00024761-exon-sc0000510-1575043694:10473..10581Clytia hemisphaericaexon
TCONS_00024761-exon-sc0000510-1491911889:14647..14864TCONS_00024761-exon-sc0000510-1491911889:14647..14864Clytia hemisphaericaexon
TCONS_00024761-exon-sc0000510-1510915933:14647..14864TCONS_00024761-exon-sc0000510-1510915933:14647..14864Clytia hemisphaericaexon
TCONS_00024761-exon-sc0000510-1575043694:14647..14864TCONS_00024761-exon-sc0000510-1575043694:14647..14864Clytia hemisphaericaexon
TCONS_00024761-exon-sc0000510-1491911889:15249..15828TCONS_00024761-exon-sc0000510-1491911889:15249..15828Clytia hemisphaericaexon
TCONS_00024761-exon-sc0000510-1510915933:15249..15828TCONS_00024761-exon-sc0000510-1510915933:15249..15828Clytia hemisphaericaexon
TCONS_00024761-exon-sc0000510-1575043694:15249..15828TCONS_00024761-exon-sc0000510-1575043694:15249..15828Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000510supercontigsc0000510:3320..15828 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
71.3771	58.2595	112.015	132.179	63.5649	48.2212	41.0593	34.2566	82.9284	68.0023	61.3796	60.6639	59.2397	61.7459	35.7477	38.9658	39.3307	40.1115	63.0897	61.6966	57.7087	51.6382	36.6984	36.9687	35.887	35.1003	21.6719	15.1509	21.3536	21.2118
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00024761 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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