TCONS_00025047 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025047
Unique NameTCONS_00025047
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2684

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025047 ID=TCONS_00025047|Name=TCONS_00025047|organism=Clytia hemisphaerica|type=transcript|length=2684bp
GACGAGATAGGGCAAGtaaaaagaaagagaaagaaaagaGAGGAAAGATT
TTAAGGATtatttttcgtcaaaattttAAGATGAAGAATAAATTCAGGTT
ACAAATTTTCTATGTATCGCTTCTCATTCAATTTTGTTTGGGTGGAGTGG
ACGACAAATACAGTCGAACGTTTCGCCACAAGCGTTTTACTTTGTACACC
TACATGAAAATGCAAGGATTGAGCGAACTTCATTGTGTAATGGAATGTTC
GAACGATCATCAATGTGGTTCTATTAATCACAAGGGTGATCAACAACTTT
GTGAATTGAATCAACATAGGGAAGAAGATCATCAACACACAACACAATTA
CAAGATGAACAAGGATGGAATCATTTCATCAAAGACAAACAGAAAACTGT
CAACACAAATGACATCCTAATGCCCACAGTCTTCCGATCACCTCAAAACC
ACCACCTTGTGAAAAGATTCGTTTATCATAACATTTGGGAATTATCTTTC
GATTTTGAACTCTTTGAAGAAGTTCCCCATTGGGTAAACATCGTCTCGTT
CCAAAAAGTTGGTACGACATATTACACACAGTATGGTAATCGAATTCCAT
CTATTTGGACAATTGGAAGAAAAATCTATTTCTACTATCCAGATGATACT
AACCCAAACCAAGATTGGAGCCTTGACCTGAATTTACAACAGACATACTC
TTTCAAGATGAGACAAACAACACATACAACGAACAAGAATATCAAACACA
TTGCCATCTATGTGAATAGAGAAAGAGTTCACTACCGAAAGTTCACCTTA
AATTTGAGTGTTGACTTTGTTGAATGCTTCCTGACAGGTATCTTATGGAA
CTTCAGATACACACAAAGCCCGATATATCCCGGTCAAAGAATTTATGTAC
CACGCGAAGAAGAGCTGTTCAAAGAGATCAATAATTGGCCGCCAGAGGAA
TGGTTTGTATCTTTTGATTACCAATTAACGTACAGTGTCCAACCAAACTA
TTGGCTTTTCATTCTTATGTTTTCTGGTGGAATAAACCAAGAAACAAACA
ATCGTGAAAAAAACTTCGTGAGAATTCAAAGACCGTCCAACGCACTTGCA
TTGAATGTCAGAACATGGACATCGACAAGTGGGGCACAACTATTAACACA
TCATGATCTAACAAACTCACTCAACACTTACATCAAATGTCAGATGCAAC
AGCAACGCGATCCAACTGATGGCAAACTTTACGTCACATTTTGGGTGGAC
GGACAACTAAAAGGGACACGAGTTCTCAATGAGAACCATCAAACATTTCA
GAAAGTACGAATCACCTCCGGATATTCAAATTTACCACATGGAGTTGAAT
GGATTGACAATTTAAAATATGGTGAGCTTTGAGATCAACATTTTAAGTTA
CGATAAAAAACAATGCACTGTGGATATTTTACTACATCTTGGCAGCCAGA
GTAAGAGTCGCAACATTAtagaagaaaaatataaatgaatgTGATTTCAA
TACCACCTTTGTGATTTGATGATTTGACAATGTCCAGTAACATACCAGTG
GAACGTGGAATTTCACACACAGAGGCTATgaaatttatgatgaaatttaa
attttttcattcaatagtCTTAACACCATACATACACTGAATAGAGCTAT
TCTATCTTTCCCAAGCCAAAAAAAGGTGAAGCAAAGTTTGCGCTGAGCGG
ACCACAATATATTACAATAGAAAACTTGGTTTTCAACGTTCAAATATTTT
GACACTGTAATTAAATGGCTTAAATTAAAGGCTCGTGTAAGCAAAATTGT
GCCGCTACTCTATTAAAAATGACCGACGGAGAAGCTCCATCTATTCTTTT
ATTGATATCTGTGATTTGTACAAGTTACAAACAGAGCGTGATTGGAAAAA
ATCCGTGTCCGCCTTGAAGTGACAAAAAAAATCCCATCAATTTGCAAAGA
TCCCAAGAAAAGGGTCAAATCGGAAAATACCTTAAGTAGATTTATAAATC
GTTTTTCGGTATTCCAAATACGCGATGTAAGATGGACAACGGTCATTTGT
GGCTGTTGTTGACACGAACGGCAGATTCGTAGAGTAGTCAGCTGTTGACA
TATTGGACAGTGCTGACTTCCAAAATAATGCGAAATGGTTCCCTGCAAAC
GGAAAGACAAGTGCTAAGCAAAATGCAATCTTTCCTTGtattaattcatg
atattcacggCGGAAAGatcccggtttttgccagtaatggcaaattttaa
acaacttttgtctagtttaaatttgccactactggctaaaaccggggtat
ttccgtagaaaacattacgtcatgaatatcacaaATATAATGTAAATAAT
ATTGTAAATAATATAGACAtcgtaaaatttaattttacagtTTAAAGTAT
AAatgttttaatcatttttcattaattttcattttttgagatgAGATTCG
CATTTTCAGTGGCTAAATTTCAAACTGCAAATCTTATTAACGGTATTAAA
ATGGGTTTCAGAAATAATCTTCAGCAACGTAAGAAAGCTCTTTGTCTCAA
CTTTCCAAAAACTACTAGAGTAAATTTTCACTGAACGCCGTATTTTGTAA
AGCCGTGCCAGCTGATGTAGGGCTGGTAAAATAGCTTTTTATTTGAACGT
AGTCAGACGTAGTCAATGGTACAGGTTAGTTTTG
Run BLAST on NCBI

protein sequence of TCONS_00025047-protein

>TCONS_00025047-protein ID=TCONS_00025047-protein|Name=TCONS_00025047-protein|organism=Clytia hemisphaerica|type=polypeptide|length=459bp
RDRASKKKEKEKRGKILRIIFRQNFKMKNKFRLQIFYVSLLIQFCLGGVD
DKYSRTFRHKRFTLYTYMKMQGLSELHCVMECSNDHQCGSINHKGDQQLC
ELNQHREEDHQHTTQLQDEQGWNHFIKDKQKTVNTNDILMPTVFRSPQNH
HLVKRFVYHNIWELSFDFELFEEVPHWVNIVSFQKVGTTYYTQYGNRIPS
IWTIGRKIYFYYPDDTNPNQDWSLDLNLQQTYSFKMRQTTHTTNKNIKHI
AIYVNRERVHYRKFTLNLSVDFVECFLTGILWNFRYTQSPIYPGQRIYVP
REEELFKEINNWPPEEWFVSFDYQLTYSVQPNYWLFILMFSGGINQETNN
REKNFVRIQRPSNALALNVRTWTSTSGAQLLTHHDLTNSLNTYIKCQMQQ
QRDPTDGKLYVTFWVDGQLKGTRVLNENHQTFQKVRITSGYSNLPHGVEW
IDNLKYGEL
Run BLAST on NCBI

transcript from alignment at sc0000517:162767..169863-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025047 ID=TCONS_00025047|Name=TCONS_00025047|organism=Clytia hemisphaerica|type=transcript|length=7097bp|location=Sequence derived from alignment at sc0000517:162767..169863- (Clytia hemisphaerica)
GACGAGATAGGGCAAGTAAAAAGAAAGAGAAAGAAAAGAGAGGAAAGATT
TTAAGGATTATTTTTCGTCAAAATTTTAAGATGAAGAATAAATTCAGGTT
ACAAATTTTCTATGTATCGCTTCTCATTCAATTTTGTTTGGGTGGAGTGG
ACGACAAATACAGTCGAACGTTTCGCCACAAGCGTTTTACTTTGTACACC
TACATGAAAATGCAAGGATTGAGCGAACTTCATTGTGTAATGGAATGTTC
GAACGATCATCAATGTGGTTCTATTAATCACAAGGGTGATCAACAACTTT
GTGAATTGAATCAACATAGGGAAGAAGATCATCAACACACAACACAATTA
CAAGATGAACAAGGATGGAATCATTTCATCAAAGACAAACAGGTAAAGAC
AGACAAAAAATTAAAATATTGAACACCTAAAACAAGTTGTGAATACACCT
TTTCGACCGTAGCTGCCAATTGCCGCGCGGGCATTTTTCCGTTCGTTTTA
CCACCCCAAAAACGTCCTAGTCTTTTTTTGCACCTAAAGACAATAGAAAA
AAGTGTAAAACAGGATTGGATCGAGCTTAGGTTGGTAAATTAAATAATAA
AGTGGCACGCAACTGACCACGGGTTAATTTTCCCACGAAAAATAAGTACA
TGGGATTGCCCCCCTACTATAACCAAGTTATTCTTGACATACTTCAAGAG
AATTCTCATATTATTCAAGGAATGGTTAACCCTATATATTTTGAATAGTG
TAACATGAGTAGAGAGACCTAGATCGAAATTCCAATTTTAAGCTAATATT
TTTTTAAATACCCGGTATATGTGCTCATAACGCATTATAGGTTAAGGGCT
CTGACCATAGTCAGAAAATTGATTTTAGTATCTGAACATAAAAGTTATGT
TTTAGATTTTTTAACACTTTTAACAAAGAATTGCCTTTATAAATTGCTTT
TTAATCAAATTCCTTAAGAGTAATTAAGAAATTAATTGCTAAAATGACGT
TATGAACTTTAAAAAGACGTTGATAATATGTTGCATCACCTTCTTTTATA
AAAAGTGCTAAGTTTTAATGGGTAATTAACCTTTTTGTTTCGAACTTTTT
TCAAACTGTCCGCAAAAAATTGAACTATTTTAAATTTTGCGAAAAAATTT
TCTAAAAAGATGTGTCAAAAGTTATGACTATTTTTTTAAGCATAATCCAG
ATGAAAAATTTATGAAAAACCACTATTTTGAAGATTTCGAGACACAGAAG
CATTTACAAAAATTTTCCGCAAAAATTTTTATTGTTCGGTAAAAGATACA
CCTTCTACTGCAAAAACTTTTTCAAAATGTTTTTTCTTCGCCGAAACTAA
GCTCTTCAAAGTTGAAATACTCTTCCTCGCAAAAGTCTTCATTTTCTTCT
TCATCAAACTTTTTCAATGCAATTTTTGAATTTTCAGATTCAGGAATAGT
TTGTCTAACAGAAAATGTATAACATGCCATAGTCTTGTTGGTTACATCAG
TCAGAAAACACATTTTAAACACGGCAATTATGAAAAATTCACTATGGTCA
GAGCCACTAAGTCAGTTTACAACGCTAGTTACGTTCCAATTTAATTCTAT
TTTCAGAAAACTGTCAACACAAATGACATCCTAATGCCCACAGGTTAGTT
CAAATACAGTATTCATGATATATTAATATTCATGTTGGCGTCATATAGTA
TTCATAATATGCAAAGAGTTAACACGAAATTATGTAATTTTAATTTTCGT
CTATCAAGTCCTTGGTGTGACTCGGCCGGGGATTGAACTCACAACCTTGC
ACAACGTAGCCGAAAAAAATCAGCCCCCAATTGCATGACTTACTCTCATT
TTATACGTTTGAAAAAACCCCTTCAACTAAATTCTAAGGTAAAATAAAAG
GAATTAATCCTTTAAGGACAACATGGAAAAACTTTTATCGTTAATAAATT
GATAAAAGTAGTGTTATCTTTATGATGATTTGATACGCTCATTTTTTGCC
TTTTTTGACTTTTTTGACAAATGATCTCCCAAATTTAAGTTTATCCTTCC
TATTTCCAATGCAAAAGGATTAATTCTTTAATAGTTTATAGAACTCGGAC
AAATTCTCTTCAAAGAGGAAGACTTTTTTCTGGGACACCCAGTAGTTACG
ATATGAACCATCTTTATATGCCTTATATACACCAAAACACGATAGTCCAG
TATATAAAGCAATTTTTCTCGCACAAAAGATCAGTTCGTGAACGTATGAA
ACCTAATTGATATTTTCTAGTCTTCCGATCACCTCAAAACCACCACCTTG
TGAAAAGATTCGTTTATCATAACATTTGGGAATTATCTTTCGATTTTGAA
CTCTTTGAAGAAGTTCCCCATTGGGTAAACATCGTCTCGTTCCAAAAAGT
TGGTACGACATATTACACACAGTATGGTAATCGAATTCCATCTATTTGGA
CAATTGGAAGAAAAATCTATTTCTACTATCCAGATGATACTAACCCAAAC
CAAGATTGGAGCCTTGACCTGAATTTACAACAGACATACTCTTTCAAGAT
GAGACAAACAACACATACAACGAACAAGAATATCAAACACATTGCCATCT
ATGTGAATAGAGAAAGAGTTCACTACCGAAAGTTCACCTTAAATTTGAGT
GTTGACTTTGTTGAATGCTTCCTGACAGGTATCTTATGGAACTTCAGATA
CACACAAAGCCCGATATATCCCGGTAAGTAATCCGTTTCTTAAAAACCAT
CACGAGAGTAAAAAAGTTTAACCATGGCTTTAGAGCGTGTTCTGATCCAA
TCCTGAACTTGAAAACTATGTAGTGGAGTCTCTATAACTCGATGGTGACT
GGCTTATAAGGTATTGTTTAGAGAAGGGACAAGAAAACTTCGAATTGAGG
AGACATTCGATTAATAGAGATTCAAGTTCTGGAGACTCAACTGTGTCTTA
AACTTGTCGTCCAATCGTAAACTTTTTCTAAAAGCAAAAAATAATAGCAT
GAATTATTGCCGGGCCGTTGCCAGGGTTGCTACAGGTTTGCCAAGTTGAA
AATTCCAGACTTTTAGTCTCAAAAGCCATATTTTTCCAGATTTTTTACCT
GAAAGTGTCGAAAATCTTCCAGACATTTTAGCGAAATTTTATCCATTAGG
AAGGTTTTTAGTCATTCCTTAATGAAAAGTTAAAATTAAACTTTCGGGAA
ATGGGAAAACTTCCATCCTGACATTTGAAATTCCAAAAAATTTCTGCTCG
CTTCGCATCAAAATTTTGAGGGGGTGACGAAATTTTTCCCCGACATTTTA
TCACCCGACCAAAACTTTTACCCGATTTTTTAAACCCAACCAAAATTAAA
ATCTAAACTTTAAACCTTTATTAACAAAAATGCGACTAAATATTTCCTTA
AAAATGAAGGTCATTATTGACATATACTAGCAAGTAGCTGTCGCTAAGAA
TGCCCCGGAGAGCTTCCTATCGNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAAATATTTCC
CTTTTGGAAAACGGGAAATATTTAATAAGTGCTTAAAACGTCGAATTACA
AGATCTTTTTTTGAGCTAGTGAAGGAAACCAATTCATTTGGACAATTTAG
TTGGGTGAAAGTGACTAAATTGTAAATTTCGTCGGGGAAAAGTGACGAAT
TTGAAATTTTGGTCGTGGGAAAGTGACGAAAATGCCTCTAGGTGACGAGA
TTTTTCCCCGACTAAATAAAACTTCGACATTTTTTTCCCCGATAAGGTAA
TTCGAATCTTTTTGTAATTCGAGCTGAAAAATTAGTGCCCTCAGCTGGAA
AGTAATTTTAAATACTCTCTGTAATATGAATCTTTCTCGAATTCGAAATA
AATTTTTCTTTAAGATAAACTCAACTGTATTTTTTAAAACCTTAGGTCAA
AGAATTTATGTACCACGCGAAGAAGAGCTGTTCAAAGAGATCAATAATTG
GCCGCCAGAGGAATGGTTTGTATCTTTTGATTACCAATTAACGTACAGTG
TCCAACCAAACTATTGGCTTTTCATTCTTATGTTTTCTGGTGGAATAAAC
CAAGAAACAAACAATCGTGAAAAAAACTTCGTGAGAATTCAAAGACCGTC
CAACGCACTTGCATTGAATGTCAGAACATGGACATCGACAAGTGGGGCAC
AACTATTAACACATCATGATCTAACAAACTCACTCAACACTTACATCAAA
TGTCAGATGCAACAGCAACGCGATCCAACTGATGGCAAACTTTACGTCAC
ATTTTGGGTGGACGGACAACTAAAAGGGACACGAGTTCTCAATGAGAACC
ATCAAACATTTCAGAAAGTACGAATCACCTCCGGATATTCAAATTTACCA
CATGGAGTTGAATGGATTGACAATTTAAAATATGGTGAGCTTTGAGATCA
ACATTTTAAGTTACGATAAAAAACAATGCACTGTGGATATTTTACTACAT
CTTGGCAGCCAGAGTAAGAGTCGCAACATTATAGAAGAAAAATATAAATG
AATGTGATTTCAATACCACCTTTGTGATTTGATGATTTGACAATGTCCAG
TAACATACCAGTGGAACGTGGAATTTCACACACAGAGGCTATGAAATTTA
TGATGAAATTTAAATTTTTTCATTCAATAGTCTTAACACCATACATACAC
TGAATAGAGCTATTCTATCTTTCCCAAGCCAAAAAAAGGTGAAGCAAAGT
TTGCGCTGAGCGGACCACAATATATTACAATAGAAAACTTGGTTTTCAAC
GTTCAAATATTTTGACACTGTAATTAAATGGCTTAAATTAAAGGCTCGTG
TAAGCAAAATTGTGCCGCTACTCTATTAAAAATGACCGACGGAGAAGCTC
CATCTATTCTTTTATTGATATCTGTGATTTGTACAAGTTACAAACAGAGC
GTGATTGGAAAAAATCCGTGTCCGCCTTGAAGTGACAAAAAAAATCCCAT
CAATTTGCAAAGATCCCAAGAAAAGGGTCAAATCGGAAAATACCTTAAGT
AGATTTATAAATCGTTTTTCGGTATTCCAAATACGCGATGTAAGATGGAC
AACGGTCATTTGTGGCTGTTGTTGACACGAACGGCAGATTCGTAGAGTAG
TCAGCTGTTGACATATTGGACAGTGCTGACTTCCAAAATAATGCGAAATG
GTTCCCTGCAAACGGAAAGACAAGTGCTAAGCAAAATGCAATCTTTCCTT
GTATTAATTCATGATATTCACGGCGGAAAGATCCCGGTTTTTGCCAGTAA
TGGCAAATTTTAAACAACTTTTGTCTAGTTTAAATTTGCCACTACTGGCT
AAAACCGGGGTATTTCCGTAGAAAACATTACGTCATGAATATCACAAATA
TAATGTAAATAATATTGTAAATAATATAGACATCGTAAAATTTAATTTTA
CAGTTTAAAGTATAAATGTTTTAATCATTTTTCATTAATTTTCATTTTTT
GAGATGAGATTCGCATTTTCAGTGGCTAAATTTCAAACTGCAAATCTTAT
TAACGGTATTAAAATGGGTTTCAGAAATAATCTTCAGCAACGTAAGAAAG
CTCTTTGTCTCAACTTTCCAAAAACTACTAGAGTAAATTTTCACTGAACG
CCGTATTTTGTAAAGCCGTGCCAGCTGATGTAGGGCTGGTAAAATAGCTT
TTTATTTGAACGTAGTCAGACGTAGTCAATGGTACAGGTTAGTTTTG

Coding sequence (CDS) from alignment at sc0000517:162767..169863-

>TCONS_00025047 ID=TCONS_00025047|Name=TCONS_00025047|organism=Clytia hemisphaerica|type=CDS|length=5520bp|location=Sequence derived from alignment at sc0000517:162767..169863- (Clytia hemisphaerica)
GTCAAAGAATTTATGTACCACGCGAAGAAGAGCTGTTCAAAGAGATCAAT
AATTGGCCGCCAGAGGAATGGTTTGTATCTTTTGATTACCAATTAACGTA
CAGTGTCCAACCAAACTATTGGCTTTTCATTCTTATGTTTTCTGGTGGAA
TAAACCAAGAAACAAACAATCGTGAAAAAAACTTCGTGAGAATTCAAAGA
CCGTCCAACGCACTTGCATTGAATGTCAGAACATGGACATCGACAAGTGG
GGCACAACTATTAACACATCATGATCTAACAAACTCACTCAACACTTACA
TCAAATGTCAGATGCAACAGCAACGCGATCCAACTGATGGCAAACTTTAC
GTCACATTTTGGGTGGACGGACAACTAAAAGGGACACGAGTTCTCAATGA
GAACCATCAAACATTTCAGAAAGTACGAATCACCTCCGGATATTCAAATT
TACCACATGGAGTTGAATGGATTGACAATTTAAAATATGGTGAGCTTTGA
TCTTCCGATCACCTCAAAACCACCACCTTGTGAAAAGATTCGTTTATCAT
AACATTTGGGAATTATCTTTCGATTTTGAACTCTTTGAAGAAGTTCCCCA
TTGGGTAAACATCGTCTCGTTCCAAAAAGTTGGTACGACATATTACACAC
AGTATGGTAATCGAATTCCATCTATTTGGACAATTGGAAGAAAAATCTAT
TTCTACTATCCAGATGATACTAACCCAAACCAAGATTGGAGCCTTGACCT
GAATTTACAACAGACATACTCTTTCAAGATGAGACAAACAACACATACAA
CGAACAAGAATATCAAACACATTGCCATCTATGTGAATAGAGAAAGAGTT
CACTACCGAAAGTTCACCTTAAATTTGAGTGTTGACTTTGTTGAATGCTT
CCTGACAGGTATCTTATGGAACTTCAGATACACACAAAGCCCGATATATC
CCGAAAACTGTCAACACAAATGACATCCTAATGCCCACAGCGAGATAGGG
CAAGTAAAAAGAAAGAGAAAGAAAAGAGAGGAAAGATTTTAAGGATTATT
TTTCGTCAAAATTTTAAGATGAAGAATAAATTCAGGTTACAAATTTTCTA
TGTATCGCTTCTCATTCAATTTTGTTTGGGTGGAGTGGACGACAAATACA
GTCGAACGTTTCGCCACAAGCGTTTTACTTTGTACACCTACATGAAAATG
CAAGGATTGAGCGAACTTCATTGTGTAATGGAATGTTCGAACGATCATCA
ATGTGGTTCTATTAATCACAAGGGTGATCAACAACTTTGTGAATTGAATC
AACATAGGGAAGAAGATCATCAACACACAACACAATTACAAGATGAACAA
GGATGGAATCATTTCATCAAAGACAAACAGGTCAAAGAATTTATGTACCA
CGCGAAGAAGAGCTGTTCAAAGAGATCAATAATTGGCCGCCAGAGGAATG
GTTTGTATCTTTTGATTACCAATTAACGTACAGTGTCCAACCAAACTATT
GGCTTTTCATTCTTATGTTTTCTGGTGGAATAAACCAAGAAACAAACAAT
CGTGAAAAAAACTTCGTGAGAATTCAAAGACCGTCCAACGCACTTGCATT
GAATGTCAGAACATGGACATCGACAAGTGGGGCACAACTATTAACACATC
ATGATCTAACAAACTCACTCAACACTTACATCAAATGTCAGATGCAACAG
CAACGCGATCCAACTGATGGCAAACTTTACGTCACATTTTGGGTGGACGG
ACAACTAAAAGGGACACGAGTTCTCAATGAGAACCATCAAACATTTCAGA
AAGTACGAATCACCTCCGGATATTCAAATTTACCACATGGAGTTGAATGG
ATTGACAATTTAAAATATGGTGAGCTTTGATCTTCCGATCACCTCAAAAC
CACCACCTTGTGAAAAGATTCGTTTATCATAACATTTGGGAATTATCTTT
CGATTTTGAACTCTTTGAAGAAGTTCCCCATTGGGTAAACATCGTCTCGT
TCCAAAAAGTTGGTACGACATATTACACACAGTATGGTAATCGAATTCCA
TCTATTTGGACAATTGGAAGAAAAATCTATTTCTACTATCCAGATGATAC
TAACCCAAACCAAGATTGGAGCCTTGACCTGAATTTACAACAGACATACT
CTTTCAAGATGAGACAAACAACACATACAACGAACAAGAATATCAAACAC
ATTGCCATCTATGTGAATAGAGAAAGAGTTCACTACCGAAAGTTCACCTT
AAATTTGAGTGTTGACTTTGTTGAATGCTTCCTGACAGGTATCTTATGGA
ACTTCAGATACACACAAAGCCCGATATATCCCGAAAACTGTCAACACAAA
TGACATCCTAATGCCCACAGCGAGATAGGGCAAGTAAAAAGAAAGAGAAA
GAAAAGAGAGGAAAGATTTTAAGGATTATTTTTCGTCAAAATTTTAAGAT
GAAGAATAAATTCAGGTTACAAATTTTCTATGTATCGCTTCTCATTCAAT
TTTGTTTGGGTGGAGTGGACGACAAATACAGTCGAACGTTTCGCCACAAG
CGTTTTACTTTGTACACCTACATGAAAATGCAAGGATTGAGCGAACTTCA
TTGTGTAATGGAATGTTCGAACGATCATCAATGTGGTTCTATTAATCACA
AGGGTGATCAACAACTTTGTGAATTGAATCAACATAGGGAAGAAGATCAT
CAACACACAACACAATTACAAGATGAACAAGGATGGAATCATTTCATCAA
AGACAAACAGGTCAAAGAATTTATGTACCACGCGAAGAAGAGCTGTTCAA
AGAGATCAATAATTGGCCGCCAGAGGAATGGTTTGTATCTTTTGATTACC
AATTAACGTACAGTGTCCAACCAAACTATTGGCTTTTCATTCTTATGTTT
TCTGGTGGAATAAACCAAGAAACAAACAATCGTGAAAAAAACTTCGTGAG
AATTCAAAGACCGTCCAACGCACTTGCATTGAATGTCAGAACATGGACAT
CGACAAGTGGGGCACAACTATTAACACATCATGATCTAACAAACTCACTC
AACACTTACATCAAATGTCAGATGCAACAGCAACGCGATCCAACTGATGG
CAAACTTTACGTCACATTTTGGGTGGACGGACAACTAAAAGGGACACGAG
TTCTCAATGAGAACCATCAAACATTTCAGAAAGTACGAATCACCTCCGGA
TATTCAAATTTACCACATGGAGTTGAATGGATTGACAATTTAAAATATGG
TGAGCTTTGATCTTCCGATCACCTCAAAACCACCACCTTGTGAAAAGATT
CGTTTATCATAACATTTGGGAATTATCTTTCGATTTTGAACTCTTTGAAG
AAGTTCCCCATTGGGTAAACATCGTCTCGTTCCAAAAAGTTGGTACGACA
TATTACACACAGTATGGTAATCGAATTCCATCTATTTGGACAATTGGAAG
AAAAATCTATTTCTACTATCCAGATGATACTAACCCAAACCAAGATTGGA
GCCTTGACCTGAATTTACAACAGACATACTCTTTCAAGATGAGACAAACA
ACACATACAACGAACAAGAATATCAAACACATTGCCATCTATGTGAATAG
AGAAAGAGTTCACTACCGAAAGTTCACCTTAAATTTGAGTGTTGACTTTG
TTGAATGCTTCCTGACAGGTATCTTATGGAACTTCAGATACACACAAAGC
CCGATATATCCCGAAAACTGTCAACACAAATGACATCCTAATGCCCACAG
CGAGATAGGGCAAGTAAAAAGAAAGAGAAAGAAAAGAGAGGAAAGATTTT
AAGGATTATTTTTCGTCAAAATTTTAAGATGAAGAATAAATTCAGGTTAC
AAATTTTCTATGTATCGCTTCTCATTCAATTTTGTTTGGGTGGAGTGGAC
GACAAATACAGTCGAACGTTTCGCCACAAGCGTTTTACTTTGTACACCTA
CATGAAAATGCAAGGATTGAGCGAACTTCATTGTGTAATGGAATGTTCGA
ACGATCATCAATGTGGTTCTATTAATCACAAGGGTGATCAACAACTTTGT
GAATTGAATCAACATAGGGAAGAAGATCATCAACACACAACACAATTACA
AGATGAACAAGGATGGAATCATTTCATCAAAGACAAACAGGTCAAAGAAT
TTATGTACCACGCGAAGAAGAGCTGTTCAAAGAGATCAATAATTGGCCGC
CAGAGGAATGGTTTGTATCTTTTGATTACCAATTAACGTACAGTGTCCAA
CCAAACTATTGGCTTTTCATTCTTATGTTTTCTGGTGGAATAAACCAAGA
AACAAACAATCGTGAAAAAAACTTCGTGAGAATTCAAAGACCGTCCAACG
CACTTGCATTGAATGTCAGAACATGGACATCGACAAGTGGGGCACAACTA
TTAACACATCATGATCTAACAAACTCACTCAACACTTACATCAAATGTCA
GATGCAACAGCAACGCGATCCAACTGATGGCAAACTTTACGTCACATTTT
GGGTGGACGGACAACTAAAAGGGACACGAGTTCTCAATGAGAACCATCAA
ACATTTCAGAAAGTACGAATCACCTCCGGATATTCAAATTTACCACATGG
AGTTGAATGGATTGACAATTTAAAATATGGTGAGCTTTGATCTTCCGATC
ACCTCAAAACCACCACCTTGTGAAAAGATTCGTTTATCATAACATTTGGG
AATTATCTTTCGATTTTGAACTCTTTGAAGAAGTTCCCCATTGGGTAAAC
ATCGTCTCGTTCCAAAAAGTTGGTACGACATATTACACACAGTATGGTAA
TCGAATTCCATCTATTTGGACAATTGGAAGAAAAATCTATTTCTACTATC
CAGATGATACTAACCCAAACCAAGATTGGAGCCTTGACCTGAATTTACAA
CAGACATACTCTTTCAAGATGAGACAAACAACACATACAACGAACAAGAA
TATCAAACACATTGCCATCTATGTGAATAGAGAAAGAGTTCACTACCGAA
AGTTCACCTTAAATTTGAGTGTTGACTTTGTTGAATGCTTCCTGACAGGT
ATCTTATGGAACTTCAGATACACACAAAGCCCGATATATCCCGAAAACTG
TCAACACAAATGACATCCTAATGCCCACAGCGAGATAGGGCAAGTAAAAA
GAAAGAGAAAGAAAAGAGAGGAAAGATTTTAAGGATTATTTTTCGTCAAA
ATTTTAAGATGAAGAATAAATTCAGGTTACAAATTTTCTATGTATCGCTT
CTCATTCAATTTTGTTTGGGTGGAGTGGACGACAAATACAGTCGAACGTT
TCGCCACAAGCGTTTTACTTTGTACACCTACATGAAAATGCAAGGATTGA
GCGAACTTCATTGTGTAATGGAATGTTCGAACGATCATCAATGTGGTTCT
ATTAATCACAAGGGTGATCAACAACTTTGTGAATTGAATCAACATAGGGA
AGAAGATCATCAACACACAACACAATTACAAGATGAACAAGGATGGAATC
ATTTCATCAAAGACAAACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014080XLOC_014080Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025047-exon-sc0000517-1575043694:169472..169863TCONS_00025047-exon-sc0000517-1575043694:169472..169863Clytia hemisphaericaexon
TCONS_00025047-exon-sc0000517-1575043694:168221..168257TCONS_00025047-exon-sc0000517-1575043694:168221..168257Clytia hemisphaericaexon
TCONS_00025047-exon-sc0000517-1575043694:167141..167593TCONS_00025047-exon-sc0000517-1575043694:167141..167593Clytia hemisphaericaexon
TCONS_00025047-exon-sc0000517-1575043694:162767..164568TCONS_00025047-exon-sc0000517-1575043694:162767..164568Clytia hemisphaericaexon
TCONS_00025047-exon-sc0000517-1510915933:169472..169863TCONS_00025047-exon-sc0000517-1510915933:169472..169863Clytia hemisphaericaexon
TCONS_00025047-exon-sc0000517-1510915933:168221..168257TCONS_00025047-exon-sc0000517-1510915933:168221..168257Clytia hemisphaericaexon
TCONS_00025047-exon-sc0000517-1510915933:167141..167593TCONS_00025047-exon-sc0000517-1510915933:167141..167593Clytia hemisphaericaexon
TCONS_00025047-exon-sc0000517-1510915933:162767..164568TCONS_00025047-exon-sc0000517-1510915933:162767..164568Clytia hemisphaericaexon
TCONS_00025047-exon-sc0000517-1491911889:169472..169863TCONS_00025047-exon-sc0000517-1491911889:169472..169863Clytia hemisphaericaexon
TCONS_00025047-exon-sc0000517-1491911889:168221..168257TCONS_00025047-exon-sc0000517-1491911889:168221..168257Clytia hemisphaericaexon
TCONS_00025047-exon-sc0000517-1491911889:167141..167593TCONS_00025047-exon-sc0000517-1491911889:167141..167593Clytia hemisphaericaexon
TCONS_00025047-exon-sc0000517-1491911889:162767..164568TCONS_00025047-exon-sc0000517-1491911889:162767..164568Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025047-proteinTCONS_00025047-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000517supercontigsc0000517:162767..169863 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.394619	0.278623	0.573668	0.864063	0.212436	0.0853544	0.0848165	0.0913643	0.125453	0.229411	0.0913732	0.203687	2.34048	1.35495	0.68907	0.67497	0.102954	0.107352	4.14168	4.16177	0.307786	0.409638	0.293617	0.26279	0.141482	0.212531	0.158553	0.191173	0.1678	0.213073
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025047 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top