TCONS_00025090 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025090
Unique NameTCONS_00025090
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1733

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025090 ID=TCONS_00025090|Name=TCONS_00025090|organism=Clytia hemisphaerica|type=transcript|length=1733bp
TTCTCACTTTACCAATAAAGGAACCGGACGATAATGATGACGATGACGAT
ATAATGGACATTGTAAAACCAGTCGTGATCGTTGGATCCATCGTTCTAGT
TCTTGTTGGtgtttttgtttacattatGTACAAACGAAGGAAATACATCA
AGGAACAgaaagaaagaaagatatcTGAAGCACAAGCTCCGCTACCCGGC
TGGATGAATCATGCAGCGAGAAATGCTGCAAAAATGTCAACGGTGACAAT
ACTCAGTGAAGACGTATTATACGAACAACCGAACGAAATGTCCATAAAAG
CCGATGCATTAGCCAATCACAACAAAGCTTTTGACGAAGACGAAGAGGAT
TCCATCTCTAACAAATCGACTAATGaccaaaacaacaaagacaatacAAC
TAATCATATCcataataacaataacaatgGCAGTATTAAAAAAGATGATT
CTCCTAAAATTGAAGATGTAGAGCTTAAGGAATCTCCTAAGACAAACAAT
ATCTCAAATGGGCATGTGTCACCACTTAAGGACGATTCAGTAGACAGCCC
ACTTGATCAGCTTCAAGAGACAGAGATCTCTAATGATACTGTAGATAGCC
CACTTGATCACACTGAAGAGACTCTAATACCTGACGATACTGTAATTCAT
ATTCCCGATAACGATGACAGCGATGACAGTGACTCAGATTCAGAAATTGG
AGAACCGATAGGAAATTCAACTAGACAGtcagatgaaaatgaagatgcaA
AAACGATGGTCCATGATATCAGTGGATCTTCCTTACCATCTCTGAGTGGC
TCATTAGTTAATGATGATTTCTTCGGACAAATGATGAATGAATACGATCG
TATAAATACGTTACCGAGGAAATAACAAGATAGTTGATCAAATGGTAAAT
CCATCAGCTGGTCAAAATCGATCACAAATcgtcaaaaaaattgtttggcg
TAATACAGCGGaccctctaattcgatcttcaagggaccaagaatttcctt
cgaattagagaaagattctaTCATagatagaaagattcgaatagtagagg
ttcgaattatagagagttgaTAGTACTTCTGCTTGGTAGTAATATCAATG
TTGGGAAGACCAATAAATCTGTCTTCCAATGAAACTTTAATGACAGATTA
ACTGGATAACACCCAATTTACACAGCCGAAAATCAAGTAATGTTAACCTT
TCTCCAAGAGACTCATTTGATGAAAGCAAGTACATTCAAGGAATGCTTCT
CAGTAAGACCCGAGAAGGAGCATATAAGGGTAAGAAGAAGAAGCaaagtt
tttaaatattatatttatatttcTTTTAACATTAAATCTGAGGgttgaat
atatattttatatttcgGAGTAATTAATAAAAGGGGTGAGTAAATCATTA
AATGACAAAAACGAGGCCATAAGAAAAGTTACGCTAATGAATGGATAGGG
CGGGCTGGTTCCAAAATCCTTTTCACAATATTTGATGTAATATCAAGAAA
ATATCTTTAATTCACTCCCACTCCTATTGAAACAACCATTCCAGGGGGTT
TTCACAATTATTTTCACTGTTTCATAGGGTGGGTTTACATCTGAAGGGGA
AAATTGATTAACCATCATTCCTTTGTTGATAACAATGCAGAACATTTAAA
CCAAACAAAAGCTCGAAACCACTTTTACGTAGTCTTTTACAAATATCCAA
TCCTAACCAATGAGAATGCTTAGGTAAAATCAA
Run BLAST on NCBI

protein sequence of TCONS_00025090-protein

>TCONS_00025090-protein ID=TCONS_00025090-protein|Name=TCONS_00025090-protein|organism=Clytia hemisphaerica|type=polypeptide|length=290bp
LTLPIKEPDDNDDDDDIMDIVKPVVIVGSIVLVLVGVFVYIMYKRRKYIK
EQKERKISEAQAPLPGWMNHAARNAAKMSTVTILSEDVLYEQPNEMSIKA
DALANHNKAFDEDEEDSISNKSTNDQNNKDNTTNHIHNNNNNGSIKKDDS
PKIEDVELKESPKTNNISNGHVSPLKDDSVDSPLDQLQETEISNDTVDSP
LDHTEETLIPDDTVIHIPDNDDSDDSDSDSEIGEPIGNSTRQSDENEDAK
TMVHDISGSSLPSLSGSLVNDDFFGQMMNEYDRINTLPRK
Run BLAST on NCBI

transcript from alignment at sc0000521:26021..34833+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025090 ID=TCONS_00025090|Name=TCONS_00025090|organism=Clytia hemisphaerica|type=transcript|length=8813bp|location=Sequence derived from alignment at sc0000521:26021..34833+ (Clytia hemisphaerica)
TTCTCACTTTACCAATAAAGGAACCGGACGATGTAAGTAATATTGAGTTT
CTATATCGGatgatatcgagggcgacggtaaatGAAACCaacgcaaaaca
aagtcgatgtaaggctctatatcgcctttgctcatcTTTTTTTAACCGTT
GTTGAGCAATGTGGATGGCCTTTTGATAGCATtccaactttgctttatac
cgtctccttcaatttatctcgaatacattaAAATCGCTAATGAATAaatc
cctgtgtcacagatctggccaaaatatcatcccgataggaaaatttccta
aaattttagTCCCACTAAGAAATTGACTATGATTTCATCCCCAATCGAAA
TTCAATCTAAaagaattgcactccaaaacctaCTGTACTTGTTGAGCTTA
GAACGATAGAGTTTATTcttccccattgggatttcgataaaaaatttTAT
CCCGCTGGTGGAAAAACTGTGCTATGAGACAGTAGTGTAAGGAGAGATTG
TTGATACAGGTGCTGGTCCATGTCTGATTAACTCGACTGCGTCTAAACTG
ATTTTCAAGAccataaaattttcaatgttctaCAATGTGAAATCCTTTCA
AGAGCATCACTCCAAATTGGGATCTcgtaaaatgatttttttctgatacC
AATTTTACTCAGACTCCTAGGGGGCCAAGTCTCAGGTCCCGTGGCAAATT
TTATAGGACTAAACGAAACCTGTTCCATTTCAAATCTTAATATATAATTA
GAATTTTTTGAGAGGAGTCAaatttttaaggcctacagTAGTTAATTTGA
TATTCtaattggtccagcgcgcagcagaatggacctttaaaaagcaactg
atcgaaaagattttgtctttgtcggggcctgtgcgcgcaataaattaaca
agtccaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtgttttggattga
attggtagtagagtcaaatttcccagttagattaaagggttgtttcaggt
agggtcaggtagggttagggctagggttggggatgggatTCAACtcctgg
ttagggttttagtCCCCGGGTAGAGTTTAGAGTAAATAgcatgtttataa
ggaactttgaactcccaaatgcagttgtgactcgatggccgagtggttaa
gacGCTGGCGTTCAAATCATAGGTGCcttgtatatagtgggttcgaatcc
catcagcggcaaaagtttcgaaatttcgggaaatgcatcaaaaccTTTCA
AAACATGGCgatacaaagaaagtgtcaaagaatagaagctcagagtggag
gatgggaagaaaattttttgcgtcccttaaggaacccggtacgaacgaca
ttcggttattgccacgtcagctggaccttcacgccgctccggcttcttgt
taGTTATTAAATTTCAACGTCTTACAATGTGATATCCGAACTAGGATATC
GCCGGGTCTTGCCGGATCTCGCAAActttgatgatatttttattaCTTAG
ACTCTTACATAGCTTACATTGATATTTCGATTCATCAGAGTATATTTAGG
AGTGAATTTTCTCGATCAAATATTGATTATCACCACAAAAGGCCTAAAAT
TAGTAGCTTTGTACTATGTTACATATGCTGGCTTGATTACATCACACTAT
GTATAACATCAACAtattgtttttaaatgtttttcgtCTTTGTCATTcgt
ttattttttgcttttctcaatttcaaattttcttgctTCTAATTTGGTCA
TAATAGCAAACAGAAAACTTCAAACCAAAAATAAATAAGTTCCTTTAATT
AGAAAAATTACTAGTTCCTTTGtcgctttttttttctttttcgaccTAAA
TGACAAGCATACCGCTTCGACCACAGTCATTAAGCCACTTATTCCTGTTC
GATTGACGGTTTTGTAAGAATGTAGGATACCAGACTTTTAAGTTTAATAT
ATTCCTGGTTAAGCTGTGTGTCATCACTTTGAAGCCTGTCGGTGGTTCGT
CAAGTAAAACTCATGTGTCACCATAACTCGCTTGGACCCCAGATTTGGCA
AAAAtgtcgtccccggtggaaaaataccctaaattgactttgattccaTC
Cctactcgaaattcaatgtttaaaaattggacaccatcctcactggattg
tgtttaaccttggaacaataaaattgcTATCCCATTAcgatttcaaaaag
aattttttttactttggaaAAGATTTCCCCCaaggttgtgagacaggggt
gtgtatgACGATGAACCATGTTGCTTACTTCTGAGTGCATTCTTATGTAG
AAGGCATTGTCCTTTGTCCTCTATTGTCTCTCTTGTTcgttcattttctt
tcttccaTTGAAGAAGGGCTTTCTCGTTGAACATGAACTTTTAAAAAGGG
GGACAGGGTTTAGTTTCGAGTAGATCTATTGCTAAATTCGATTACAATCC
CTTTTATCATTAACAGGATTAAAATTATGATTAATTAATAAGATGTTTAA
GTAAAGCATACCTATCTTTTGAACagaaacaaaacatcaaattaaGAAAG
CATCGTTGCAACCATGCATATAACCATCTAGCCTAggtaactaagcccgt
attcacaaggctacgACACACGGttaatggcaatatagcgttttcggtgc
tttaaagattttttttatatttacggatttcaAGTTTgcctagttattca
gtcacaacttaccatcaaatTTAGAAGAACACAAACACATGCCAGCGTAT
ATAAAAGTTCCCTTTTTCCAAGTCACTCCTTAAAACTTAAAGGGCAAAAA
GAAACGTTTTTGAGCATTAATTGGAAGTGATaagctaaagtctattcacg
ataagtgtgcactcttttttcatttacttataacttttgaaggaattctt
caatctttaaaaatttggtatcattggaaaaatattagttagtggaacaa
tttgaaataaaaaaatctttaaaataattctaaaaatgaagatgaaaatg
aagaagaaaaaaatgaagatcttgtagaagattgctataactatcatttt
cactgaagtgaaaccttgattatcgaacatcatcactgtgaaaaaatttc
tcaaaaataataattcagtcaaaagatatcaaacaaagttataagctaat
tgacgtctaaaacgctgttttctgctgatttctgctgttttttggggtca
atcacttattaactttgtatcataacttagttattcagtcacaacttacc
atcaaatTTAGAAGAACACAAACACATGCCAGCGTATTAAAAGTTCCCTT
TTTCCAAGTCACTCCTTAAAACTTAAAGGGCAAAAAGAAACGTTTTTGAG
CATTAATTGGAAGTGATAAGCTAAAAATGAAATAGACAAAAGGTTTCTCC
TGTTTTAGAGATTGAAAgaaatttggtgatttttggACCCTGTTGGTGAT
TTCAAAATCCTAGGCAGTGTCTCTTTCTGCCTacatttcctttttctttt
ttctcttatcTTTTTCAAGAAGTGAGGATAATGACGTTAAGATAGAAAGA
CAGAAAGAGTCAATgtaatctccgagcagattctgatactgCGCGCATGG
CACTTATTGTAAAGGTCATGGCTCTGTAAGATAAGAGAATCGGCCCAGGT
CAGAGCCATAACCCCTCGGAGCAGAGCGTAGTATGcacagaatggatgat
ctgttatgagaggGCTATTGATCAGGGACTCTGCTGTGATGGGGGGGAGG
GGCTGGTGGGGACTCTCGTCAtcccaaacaaaaattatttgtaACTAGTC
ATTGAAATGACGAACATCGACTTTCCCTCTTcgttattttttctcaaaaa
aaatcccGTATTTGATATCAATATCATTCGATTCCATAATTATAAGTGTG
GTTTTCGACGTATGTTAATGAGGTTGGCCAGcaattagctcaaaaaaaaa
gaaaaNTTATTTTTTCTCAACAAAAATCCCATATTTGATATCAATATCAT
TCGATTCCATAATTATAAGTGTGGTTTTCGACGTATGTTAATGAGGTTGG
CCAGcaattagctcaaaaaaagaaaaaaaagacatttatAACGCAATCAT
CAGGAAAGGTTTCTTGGCATTAGTTGTTTAGTGTTGTTTGGGATAGGTAG
TTGGTTTAAAAGTTGTGTCCTCTTTGTGTATCTTCTTCTTCTGGTGTGGG
AATCATGACAACAATTAGGCCACAACAAAATGTACGGGTTAGTTTTATTC
GTATaagagtttttgtttttgacaatttttttaaagtttcaaacttattt
tcaaCTTCGTGGCTTTTCTTAAGGTTGCACACTTCTAAATCACCGTAATT
TACCTTTAGTATACACATTAGCCCTTCAACTCACAAAAGATACAAATCAA
GAGTTTACAAGAGTGAAAATGGTGTCAGAATCTGTCTTTCAATGANGACA
AATCAAAAGTTTACAAGAGTGAAAATAGTGTCAGAAGACTTTAGAGATTT
GACATCAATCCTACCAAGTAAATTTGACTCAATCTCCTCACACTTTAAGG
GTTTCATTCGTGTTTTAACAATGAGATCATCAGCTTGGTTGAAGAATATA
AGCTTCACCTCACACCCTCTCCAATGTGGCAATGtataatcaaaagaatt
tgaattcttttcaaTTTGTTCAAAATCCTTCCCATAGAATGATGACGATG
ACGATATAATGGACATTGTAAAACCAGTCGTGATCGTTGGATCCATCGTT
CTAGTTCTTGTTGGtgtttttgtttacattatGTACAAACGAAGGAAATA
CATCAAGGAACAGTAagtaaattttcatttattaagATTAATGAAATTGG
ACATTTCAaatcattttgttttttgttaaaattgctCATCTAGATTTCGA
ATGCAGTTGAGCGTCTCTCTAGTTCGATGCTCAAAGGAATAAAAACTCTT
CGATTTAGAGAAAGTTTCGAAtcacagagagtaatttaaacaaCCTTCCA
GCTGAGGGaagcaatattttagttcgaattacagaaggaTTTGGATAACA
GAGGTATAAATTAAAGAAAGTTGACTGTAGATGTTCTGAAGAAAATATAT
AGCATAATCTAGCCTGTCATGTATTTCATTTTCGAATTGGACTAATAATT
ATTTAGAAATTCAAAGTATTTCACCAATACTGTGCCAGCATACCAAATAA
attattgttattgattacgTGTGCTAAAGCCAAATGTTGGTCAAAGAAGA
AGAATTCAAGATTGAATTGTGTTATCAGTAGATGATACATAATTTTCAAA
TTAGTAAAATACATCTGATTAATAAAAAGCATGTGTTGTTGTATACAAAC
TTTCGAATCTTATCTTTTTAATGAGGTGTATTGACGTCATGCTTCCTTCC
GATAGTGATTTCTAACCAAGAAAATTTATTAAATCGACTTCTTGattagt
taaaaaaaaatggcCAGCCTTCGATGTTGCGAAATTTATCTTGactcaaa
aaaacgaaaactaaattgttttaaaaaccCTGATTTTCAAAACCAATTTT
AGGGTATTTGCACCAAATAAGCAAGACTAAGACTTATCGTAAGCATTTCC
TTTCTTTAAATCTATGTTACTTAAAATctccttttattttttcataggaa
agaaagaaagatatcTGAAGCACAAGGTATGTCCGATCTTTCGTTCTATT
GATTATTCATATATTCTACAGTATATAGTCAAGATTATGTTTTGACCTTT
TCGGAAAAGATATTTACTATAGGCCTATTGTATTATACgatttttcaatc
atttcagCTCCGCTACCCGGCTGGATGAATCATGCAGCGAGAAATGCTGG
TATGTATTACTTGAAATATTTCTACTCCCGCAGGTTaccaatttctttaa
aaacaatctAGTACTGTAGAGAGGGCTTGGACTTCACTACTCTATGCTGC
CTATCTATTTGGATTTAGTGACAGCAGGCTGCTCAGCCCATTCTCACAAT
TGTGTTAACGCGACTAGGCCTCCTGTCAGCAACCTTGGACTGACTGCCCT
GTTCCCCTCACATATCATGAGTTGACCCGTGTGAAGTTTGTTGACTCACC
AAATGAAACACTACGAGTCGGGATCGAACCATGATCTCCTGTATAGGAAT
CAAACTtgatgaccactataccacggcgCCTAGCGCAtcgaatatctttt
caaaatagTTTTTGCTTTAGTaataatttaacatttaatTTTTCATGAAT
CTTCAGCAAAAATGTCAACGGTGACAATACTCAGTGAAGACGTATTATAC
GAACAACCGAACGAAATGTCCATAAAAGCCGATGCATTAGCCAATCACAA
CAAAGCTTTTGACGAAGACGAAGAGGTAGGGAAGGttttttaagtttaac
ttttGAGAAGCGAGCGGAAGAAGAAGGAAGTTATTTTTTTTGGTTACAAC
TTAATGATTGAAGGTTTACAGAATATGGATACAGTTAGAtaccggcgtaa
aaagggtcgATAATGTGCACAAATTGTCTCATGTCTTCCTTTAAATTCAA
TTGAAGCATTTACCATAAGTAACTTTTTCCATTCGATTCCTAGTGTTGAT
CTTTTTGTTATTATGTCTGTTTTGTTACTTAGCATTGAGCTTTGTGAGCC
AACCTTCATTAAGTGAGTGACCGCCTATAACCCTCTCATCGTCTAGTAAC
CAGGAAACATCATCCGTAATTTCAACTAATCTACTAATATCACCAAATCA
ATTAATCATCAAATATACATACACCGCTTAATTATTGAGGTTTATGCAAA
AAGTTCCTTGTATTTAATATTTGCGCAATATCTTTACGCAAACAAGGTAA
ATTTTCACCGCTAATTCTTCCACTAACGTTTGCTgctatttcaaaacttt
tgactGTTTTCAATAATCAAGAGTATCTCTAAAGGTTGGGTGATGAAAAC
TCATCTACTATTGGCGGATCTTAGGGGGGTTCATTTCCATTTCATTCATT
GATTTTCGAATCTTCAAATCGGGCAAAACTATGACTGGTCCTCACAGTGT
CACTAAATTTCAGCAACCCTCCCCCAATATAGagtgcttcctacggcact
gtatgATGGTGATTCTTCATTCTCTTATAATAGGCAGTATGGCCCACTAT
GAAACATTCtccgtcataaattttgaacaCTCTAAAATCCACCACTATGA
CTACTCTATCGTTGCTGATAACTTTTGTTCTTTTCAATCAAACGATACTT
GACATATTGACCTTTCAATTTTCCCAGGATTCCATCTCTAACAAATCGAC
TAATGaccaaaacaacaaagacaatacAACTAATCATATCcataataaca
ataacaatgGCAGTATTAAAAAAGATGATTCTCCTAAAATTGAAGATGTA
GAGCTTAAGGAATCTCCTAAGACAAACAATATCTCAAATGGGCATGTGTC
ACCACTTAAGGACGATTCAGTAGACAGCCCACTTGATCAGCTTCAAGAGA
CAGAGATCTCTAATGATACTGTAGATAGCCCACTTGATCACACTGAAGAG
ACTCTAATACCTGACGATACTGTAATTCATATTCCCGATAACGATGACAG
CGATGACAGTGACTCAGATTCAGAAATTGGAGAACCGATAGGAAATTCAA
CTAGACAGtcagatgaaaatgaagatgcaAAAACGATGGTCCATGATATC
AGTGGATCTTCCTTACCATCTCTGAGTGGCTCATTAGTTAATGATGATTT
CTTCGGACAAATGATGAATGAATACGATCGTATAAATACGTTACCGAGGA
AATAACAAGATAGTTGATCAAATGGTAAATCCATCAGCTGGTCAAAATCG
ATCACAAATcgtcaaaaaaattgtttggcgTAATACAGCGGaccctctaa
ttcgatcttcaagggaccaagaatttccttcgaattagagaaagattcta
TCATagatagaaagattcgaatagtagaggttcgaattatagagagttga
TAGTACTTCTGCTTGGTAGTAATATCAATGTTGGGAAGACCAATAAATCT
GTCTTCCAATGAAACTTTAATGACAGATTAACTGGATAACACCCAATTTA
CACAGCCGAAAATCAAGTAATGTTAACCTTTCTCCAAGAGACTCATTTGA
TGAAAGCAAGTACATTCAAGGAATGCTTCTCAGTAAGACCCGAGAAGGAG
CATATAAGGGTAAGAAGAAGAAGCaaagtttttaaatattatatttatat
ttcTTTTAACATTAAATCTGAGGgttgaatatatattttatatttcgGAG
TAATTAATAAAAGGGGTGAGTAAATCATTAAATGACAAAAACGAGGCCAT
AAGAAAAGTTACGCTAATGAATGGATAGGGCGGGCTGGTTCCAAAATCCT
TTTCACAATATTTGATGTAATATCAAGAAAATATCTTTAATTCACTCCCA
CTCCTATTGAAACAACCATTCCAGGGGGTTTTCACAATTATTTTCACTGT
TTCATAGGGTGGGTTTACATCTGAAGGGGAAAATTGATTAACCATCATTC
CTTTGTTGATAACAATGCAGAACATTTAAACCAAACAAAAGCTCGAAACC
ACTTTTACGTAGTCTTTTACAAATATCCAATCCTAACCAATGAGAATGCT
TAGGTAAAATCAA

Coding sequence (CDS) from alignment at sc0000521:26021..34833+

>TCONS_00025090 ID=TCONS_00025090|Name=TCONS_00025090|organism=Clytia hemisphaerica|type=CDS|length=5238bp|location=Sequence derived from alignment at sc0000521:26021..34833+ (Clytia hemisphaerica)
CTCACTTTACCAATAAAGGAACCGGACGATAATGATGACGATGACGATAT
AATGGACATTGTAAAACCAGTCGTGATCGTTGGATCCATCGTTCTAGTTC
TTGTTGGtgtttttgtttacattatGTACAAACGAAGGAAATACATCAAG
GAACAgaaagaaagaaagatatcTGAAGCACAAGCTCCGCTACCCGGCTG
GATGAATCATGCAGCGAGAAATGCTGCAAAAATGTCAACGGTGACAATAC
TCAGTGAAGACGTATTATACGAACAACCGAACGAAATGTCCATAAAAGCC
GATGCATTAGCCAATCACAACAAAGCTTTTGACGAAGACGAAGAGGATTC
CATCTCTAACAAATCGACTAATGaccaaaacaacaaagacaatacAACTA
ATCATATCcataataacaataacaatgGCAGTATTAAAAAAGATGATTCT
CCTAAAATTGAAGATGTAGAGCTTAAGGAATCTCCTAAGACAAACAATAT
CTCAAATGGGCATGTGTCACCACTTAAGGACGATTCAGTAGACAGCCCAC
TTGATCAGCTTCAAGAGACAGAGATCTCTAATGATACTGTAGATAGCCCA
CTTGATCACACTGAAGAGACTCTAATACCTGACGATACTGTAATTCATAT
TCCCGATAACGATGACAGCGATGACAGTGACTCAGATTCAGAAATTGGAG
AACCGATAGGAAATTCAACTAGACAGtcagatgaaaatgaagatgcaAAA
ACGATGGTCCATGATATCAGTGGATCTTCCTTACCATCTCTGAGTGGCTC
ATTAGTTAATGATGATTTCTTCGGACAAATGATGAATGAATACGATCGTA
TAAATACGTTACCGAGGAAATAACTCACTTTACCAATAAAGGAACCGGAC
GATAATGATGACGATGACGATATAATGGACATTGTAAAACCAGTCGTGAT
CGTTGGATCCATCGTTCTAGTTCTTGTTGGtgtttttgtttacattatGT
ACAAACGAAGGAAATACATCAAGGAACAgaaagaaagaaagatatcTGAA
GCACAAGCTCCGCTACCCGGCTGGATGAATCATGCAGCGAGAAATGCTGC
AAAAATGTCAACGGTGACAATACTCAGTGAAGACGTATTATACGAACAAC
CGAACGAAATGTCCATAAAAGCCGATGCATTAGCCAATCACAACAAAGCT
TTTGACGAAGACGAAGAGGATTCCATCTCTAACAAATCGACTAATGacca
aaacaacaaagacaatacAACTAATCATATCcataataacaataacaatg
GCAGTATTAAAAAAGATGATTCTCCTAAAATTGAAGATGTAGAGCTTAAG
GAATCTCCTAAGACAAACAATATCTCAAATGGGCATGTGTCACCACTTAA
GGACGATTCAGTAGACAGCCCACTTGATCAGCTTCAAGAGACAGAGATCT
CTAATGATACTGTAGATAGCCCACTTGATCACACTGAAGAGACTCTAATA
CCTGACGATACTGTAATTCATATTCCCGATAACGATGACAGCGATGACAG
TGACTCAGATTCAGAAATTGGAGAACCGATAGGAAATTCAACTAGACAGt
cagatgaaaatgaagatgcaAAAACGATGGTCCATGATATCAGTGGATCT
TCCTTACCATCTCTGAGTGGCTCATTAGTTAATGATGATTTCTTCGGACA
AATGATGAATGAATACGATCGTATAAATACGTTACCGAGGAAATAACTCA
CTTTACCAATAAAGGAACCGGACGATAATGATGACGATGACGATATAATG
GACATTGTAAAACCAGTCGTGATCGTTGGATCCATCGTTCTAGTTCTTGT
TGGtgtttttgtttacattatGTACAAACGAAGGAAATACATCAAGGAAC
AgaaagaaagaaagatatcTGAAGCACAAGCTCCGCTACCCGGCTGGATG
AATCATGCAGCGAGAAATGCTGCAAAAATGTCAACGGTGACAATACTCAG
TGAAGACGTATTATACGAACAACCGAACGAAATGTCCATAAAAGCCGATG
CATTAGCCAATCACAACAAAGCTTTTGACGAAGACGAAGAGGATTCCATC
TCTAACAAATCGACTAATGaccaaaacaacaaagacaatacAACTAATCA
TATCcataataacaataacaatgGCAGTATTAAAAAAGATGATTCTCCTA
AAATTGAAGATGTAGAGCTTAAGGAATCTCCTAAGACAAACAATATCTCA
AATGGGCATGTGTCACCACTTAAGGACGATTCAGTAGACAGCCCACTTGA
TCAGCTTCAAGAGACAGAGATCTCTAATGATACTGTAGATAGCCCACTTG
ATCACACTGAAGAGACTCTAATACCTGACGATACTGTAATTCATATTCCC
GATAACGATGACAGCGATGACAGTGACTCAGATTCAGAAATTGGAGAACC
GATAGGAAATTCAACTAGACAGtcagatgaaaatgaagatgcaAAAACGA
TGGTCCATGATATCAGTGGATCTTCCTTACCATCTCTGAGTGGCTCATTA
GTTAATGATGATTTCTTCGGACAAATGATGAATGAATACGATCGTATAAA
TACGTTACCGAGGAAATAACTCACTTTACCAATAAAGGAACCGGACGATA
ATGATGACGATGACGATATAATGGACATTGTAAAACCAGTCGTGATCGTT
GGATCCATCGTTCTAGTTCTTGTTGGtgtttttgtttacattatGTACAA
ACGAAGGAAATACATCAAGGAACAgaaagaaagaaagatatcTGAAGCAC
AAGCTCCGCTACCCGGCTGGATGAATCATGCAGCGAGAAATGCTGCAAAA
ATGTCAACGGTGACAATACTCAGTGAAGACGTATTATACGAACAACCGAA
CGAAATGTCCATAAAAGCCGATGCATTAGCCAATCACAACAAAGCTTTTG
ACGAAGACGAAGAGGATTCCATCTCTAACAAATCGACTAATGaccaaaac
aacaaagacaatacAACTAATCATATCcataataacaataacaatgGCAG
TATTAAAAAAGATGATTCTCCTAAAATTGAAGATGTAGAGCTTAAGGAAT
CTCCTAAGACAAACAATATCTCAAATGGGCATGTGTCACCACTTAAGGAC
GATTCAGTAGACAGCCCACTTGATCAGCTTCAAGAGACAGAGATCTCTAA
TGATACTGTAGATAGCCCACTTGATCACACTGAAGAGACTCTAATACCTG
ACGATACTGTAATTCATATTCCCGATAACGATGACAGCGATGACAGTGAC
TCAGATTCAGAAATTGGAGAACCGATAGGAAATTCAACTAGACAGtcaga
tgaaaatgaagatgcaAAAACGATGGTCCATGATATCAGTGGATCTTCCT
TACCATCTCTGAGTGGCTCATTAGTTAATGATGATTTCTTCGGACAAATG
ATGAATGAATACGATCGTATAAATACGTTACCGAGGAAATAACTCACTTT
ACCAATAAAGGAACCGGACGATAATGATGACGATGACGATATAATGGACA
TTGTAAAACCAGTCGTGATCGTTGGATCCATCGTTCTAGTTCTTGTTGGt
gtttttgtttacattatGTACAAACGAAGGAAATACATCAAGGAACAgaa
agaaagaaagatatcTGAAGCACAAGCTCCGCTACCCGGCTGGATGAATC
ATGCAGCGAGAAATGCTGCAAAAATGTCAACGGTGACAATACTCAGTGAA
GACGTATTATACGAACAACCGAACGAAATGTCCATAAAAGCCGATGCATT
AGCCAATCACAACAAAGCTTTTGACGAAGACGAAGAGGATTCCATCTCTA
ACAAATCGACTAATGaccaaaacaacaaagacaatacAACTAATCATATC
cataataacaataacaatgGCAGTATTAAAAAAGATGATTCTCCTAAAAT
TGAAGATGTAGAGCTTAAGGAATCTCCTAAGACAAACAATATCTCAAATG
GGCATGTGTCACCACTTAAGGACGATTCAGTAGACAGCCCACTTGATCAG
CTTCAAGAGACAGAGATCTCTAATGATACTGTAGATAGCCCACTTGATCA
CACTGAAGAGACTCTAATACCTGACGATACTGTAATTCATATTCCCGATA
ACGATGACAGCGATGACAGTGACTCAGATTCAGAAATTGGAGAACCGATA
GGAAATTCAACTAGACAGtcagatgaaaatgaagatgcaAAAACGATGGT
CCATGATATCAGTGGATCTTCCTTACCATCTCTGAGTGGCTCATTAGTTA
ATGATGATTTCTTCGGACAAATGATGAATGAATACGATCGTATAAATACG
TTACCGAGGAAATAACTCACTTTACCAATAAAGGAACCGGACGATAATGA
TGACGATGACGATATAATGGACATTGTAAAACCAGTCGTGATCGTTGGAT
CCATCGTTCTAGTTCTTGTTGGtgtttttgtttacattatGTACAAACGA
AGGAAATACATCAAGGAACAgaaagaaagaaagatatcTGAAGCACAAGC
TCCGCTACCCGGCTGGATGAATCATGCAGCGAGAAATGCTGCAAAAATGT
CAACGGTGACAATACTCAGTGAAGACGTATTATACGAACAACCGAACGAA
ATGTCCATAAAAGCCGATGCATTAGCCAATCACAACAAAGCTTTTGACGA
AGACGAAGAGGATTCCATCTCTAACAAATCGACTAATGaccaaaacaaca
aagacaatacAACTAATCATATCcataataacaataacaatgGCAGTATT
AAAAAAGATGATTCTCCTAAAATTGAAGATGTAGAGCTTAAGGAATCTCC
TAAGACAAACAATATCTCAAATGGGCATGTGTCACCACTTAAGGACGATT
CAGTAGACAGCCCACTTGATCAGCTTCAAGAGACAGAGATCTCTAATGAT
ACTGTAGATAGCCCACTTGATCACACTGAAGAGACTCTAATACCTGACGA
TACTGTAATTCATATTCCCGATAACGATGACAGCGATGACAGTGACTCAG
ATTCAGAAATTGGAGAACCGATAGGAAATTCAACTAGACAGtcagatgaa
aatgaagatgcaAAAACGATGGTCCATGATATCAGTGGATCTTCCTTACC
ATCTCTGAGTGGCTCATTAGTTAATGATGATTTCTTCGGACAAATGATGA
ATGAATACGATCGTATAAATACGTTACCGAGGAAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014110XLOC_014110Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025090-proteinTCONS_00025090-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025090-exon-sc0000521-1491911889:26021..26052TCONS_00025090-exon-sc0000521-1491911889:26021..26052Clytia hemisphaericaexon
TCONS_00025090-exon-sc0000521-1510915933:26021..26052TCONS_00025090-exon-sc0000521-1510915933:26021..26052Clytia hemisphaericaexon
TCONS_00025090-exon-sc0000521-1575043694:26021..26052TCONS_00025090-exon-sc0000521-1575043694:26021..26052Clytia hemisphaericaexon
TCONS_00025090-exon-sc0000521-1491911889:30858..30982TCONS_00025090-exon-sc0000521-1491911889:30858..30982Clytia hemisphaericaexon
TCONS_00025090-exon-sc0000521-1510915933:30858..30982TCONS_00025090-exon-sc0000521-1510915933:30858..30982Clytia hemisphaericaexon
TCONS_00025090-exon-sc0000521-1575043694:30858..30982TCONS_00025090-exon-sc0000521-1575043694:30858..30982Clytia hemisphaericaexon
TCONS_00025090-exon-sc0000521-1491911889:31818..31846TCONS_00025090-exon-sc0000521-1491911889:31818..31846Clytia hemisphaericaexon
TCONS_00025090-exon-sc0000521-1510915933:31818..31846TCONS_00025090-exon-sc0000521-1510915933:31818..31846Clytia hemisphaericaexon
TCONS_00025090-exon-sc0000521-1575043694:31818..31846TCONS_00025090-exon-sc0000521-1575043694:31818..31846Clytia hemisphaericaexon
TCONS_00025090-exon-sc0000521-1491911889:31978..32019TCONS_00025090-exon-sc0000521-1491911889:31978..32019Clytia hemisphaericaexon
TCONS_00025090-exon-sc0000521-1510915933:31978..32019TCONS_00025090-exon-sc0000521-1510915933:31978..32019Clytia hemisphaericaexon
TCONS_00025090-exon-sc0000521-1575043694:31978..32019TCONS_00025090-exon-sc0000521-1575043694:31978..32019Clytia hemisphaericaexon
TCONS_00025090-exon-sc0000521-1491911889:32427..32545TCONS_00025090-exon-sc0000521-1491911889:32427..32545Clytia hemisphaericaexon
TCONS_00025090-exon-sc0000521-1510915933:32427..32545TCONS_00025090-exon-sc0000521-1510915933:32427..32545Clytia hemisphaericaexon
TCONS_00025090-exon-sc0000521-1575043694:32427..32545TCONS_00025090-exon-sc0000521-1575043694:32427..32545Clytia hemisphaericaexon
TCONS_00025090-exon-sc0000521-1491911889:33448..34833TCONS_00025090-exon-sc0000521-1491911889:33448..34833Clytia hemisphaericaexon
TCONS_00025090-exon-sc0000521-1510915933:33448..34833TCONS_00025090-exon-sc0000521-1510915933:33448..34833Clytia hemisphaericaexon
TCONS_00025090-exon-sc0000521-1575043694:33448..34833TCONS_00025090-exon-sc0000521-1575043694:33448..34833Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000521supercontigsc0000521:26021..34833 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	1.20919	0.54895	7.85391e-05	0	0.263006	12.6493	10.2813	0.448366	1.44189	2.40528	2.82534	8.99524	10.018	1.39925	4.30762	0.221618	1.31983	0.625899	8.41191e-09	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025090 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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