TCONS_00025360 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025360
Unique NameTCONS_00025360
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length182

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025360 ID=TCONS_00025360|Name=TCONS_00025360|organism=Clytia hemisphaerica|type=transcript|length=182bp
TCGgtgagaaaactttttgacgatgGTATTTTTGTCATAGAAGTGAAGGT
GTTTGTATATTTGAACCATGTCGCCAAATTGCCTCCTAAATTCAAGAGAT
GGTAAGTCCAGTTTTCGCAGGCGCTGCTCGTATGTTAAATTTCGTAGACG
ACGTACCATTCTTGTTGCACGCCTTTGAACCC
Run BLAST on NCBI

transcript from alignment at sc0000532:38864..39045

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025360 ID=TCONS_00025360|Name=TCONS_00025360|organism=Clytia hemisphaerica|type=transcript|length=182bp|location=Sequence derived from alignment at sc0000532:38864..39045 (Clytia hemisphaerica)
GGGTTCAAAGGCGTGCAACAAGAATGGTACGTCGTCTACGAAATTTAACA
TACGAGCAGCGCCTGCGAAAACTGGACTTACCATCTCTTGAATTTAGGAG
GCAATTTGGCGACATGGTTCAAATATACAAACACCTTCACTTCTATGACA
AAAATACcatcgtcaaaaagttttctcacCGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014233XLOC_014233Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025360-exon-sc0000532-1491911889:38864..39045TCONS_00025360-exon-sc0000532-1491911889:38864..39045Clytia hemisphaericaexon
TCONS_00025360-exon-sc0000532-1510915933:38864..39045TCONS_00025360-exon-sc0000532-1510915933:38864..39045Clytia hemisphaericaexon
TCONS_00025360-exon-sc0000532-1575043694:38864..39045TCONS_00025360-exon-sc0000532-1575043694:38864..39045Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000532supercontigsc0000532:38864..39045 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025360 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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