TCONS_00025395 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025395
Unique NameTCONS_00025395
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1843

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025395 ID=TCONS_00025395|Name=TCONS_00025395|organism=Clytia hemisphaerica|type=transcript|length=1843bp
ACGTTTGATATCCTTGTCATAccaagacacccctgtctcaacaGAAATCT
CTAACTTGATACAGAGACATCAAACTAAATCGTTCCCGTCATTTctcaat
gtgaaaaaaaactaaagaaTGCAAAATCAACATGCAGAGCCTTGGAATGC
AGGTTTCGATCAAGCCAGTCAGAACAGTCATACACTTCGACAACAAGGAT
TGCCACCGCAAACTGATGCATCAAGGTTACCAAGTCAGAACCGAGAGGAG
TTTGAGAGATTCCAACGATCAAAAGATCGAACGTTTTTATGTATGTTAAT
ACTGGTGATTGTCTTCTTATTGGGTTCCATTGTATGTGGTGGTGTGGCGG
TTGCCATGGTTCCCTGGTGGAAACACTCTAGAGAAGCACCAGAAGTTTCA
GAATGGATACACATCGGGTTTTGGGAAGCGTGCTTCAAACCGGAGCCTGA
TCAAGATTGGGAATGTAATAAATATACAAATTCAGATACTTTGCAATCAC
CAGATTCGTTAGGCATGGACATTTTGATATCACTATCGCTAGCTGGTATT
GGCGTGGCATTTCTCGCATTGATTTTAACTATTGTGGCATCAATATTCAA
GAAATCAAGATATATACGAGAATTGCTTTTCTCGATTTGTGTACTTTGTT
TAATTGGAGCTGGTTTACTTGGCTCAGTCATCGGTTTAGTTCTGGACAAA
GACAAAGCCGAAAACTTGATCCCTCGTGGAATCCAAATCAAAAGCACCGT
CACAGGAATAGCAACTCTTAAACACGCCCTTATGTTCTTCATCATGTGTG
GGGCGGGAGGGGCGGTTTTTATGGCGCTCGTATTTACAgCTGTGATTTTA
TTCATCCATGATGATGTCGATTTGAACGATATGAAATATGACAATGATGA
AGATTTAAATCTGGAGATGGATGAAGACGGCTTCCCTGTCAAAGAGAAAA
GACAAGAAAATGACCAGCCAGGCCCATCATCGAGATATCTTGACGTGCCA
GACATCGGCATGATAGGGGATGGAAGGCACCACGAAGGAGGGGGCGGAAG
ACACCACAGCGGAGGAGGTGGAAGGCACCACAATGGTGAAAGGCGTCAAA
AAAGAACAAGCCAAGGTTCTTATGACGCGCAGTATTCCAATCCATCATTT
CACCCACAATTTAATATGGGATATGACCACCATTATCAACATCCACGCCA
TCCACACCGCCCTTCCTCTCACGCCTCACATGGACGCCCATCTTCTTATT
ACTCTGATAGTTCACGTAATGGACATCGCCCTACGAAACCACCCAGAGCA
AACCGATCACGTGATCCTAGAATGGGCGGTGGGCGGCCAGGAAGTGGCGA
TTTCAGAAGTTATGAAGACTATGAAATGTATTTCAACACGCCCTATTAAT
CGAACAATCGAATAATAGACTTTTGACAAAGGAAAAATATTAGGAAAAAG
CGagatttttgaaatcaaatttaaGTCCTCCCTTGCGTTGGTGTTTGGAT
AAGCAACTGTCTGCTCTCAGAAGCAGCCAATTTCTGTTTAGCAAAATGTC
TGAACGAATTCAGATCATGATGGAGATCCTTATAGTTAAAGAAAAACAGA
TATCCGAGAATTCGAACAAGCTTCtctagatttttttatttctactcTCA
TTCGTGAAAGTGGTATAAAGATcgactttaaaaataaaatggtcacaaaa
tacAATGTGTCTGTCTAAAGAAACGGGGTATCTTAAAATACTCCATTTGA
CCGCAAAATAGTTTTCAGGGGGGAATATTATAAGTATTTAAATTTTGTAG
TTGACTGTAAATAGATGCAATAATAAATTGTTTTGTATGATAA
Run BLAST on NCBI

protein sequence of TCONS_00025395-protein

>TCONS_00025395-protein ID=TCONS_00025395-protein|Name=TCONS_00025395-protein|organism=Clytia hemisphaerica|type=polypeptide|length=426bp
MQNQHAEPWNAGFDQASQNSHTLRQQGLPPQTDASRLPSQNREEFERFQR
SKDRTFLCMLILVIVFLLGSIVCGGVAVAMVPWWKHSREAPEVSEWIHIG
FWEACFKPEPDQDWECNKYTNSDTLQSPDSLGMDILISLSLAGIGVAFLA
LILTIVASIFKKSRYIRELLFSICVLCLIGAGLLGSVIGLVLDKDKAENL
IPRGIQIKSTVTGIATLKHALMFFIMCGAGGAVFMALVFTAVILFIHDDV
DLNDMKYDNDEDLNLEMDEDGFPVKEKRQENDQPGPSSRYLDVPDIGMIG
DGRHHEGGGGRHHSGGGGRHHNGERRQKRTSQGSYDAQYSNPSFHPQFNM
GYDHHYQHPRHPHRPSSHASHGRPSSYYSDSSRNGHRPTKPPRANRSRDP
RMGGGRPGSGDFRSYEDYEMYFNTPY
Run BLAST on NCBI

transcript from alignment at sc0000533:109693..116237-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025395 ID=TCONS_00025395|Name=TCONS_00025395|organism=Clytia hemisphaerica|type=transcript|length=6545bp|location=Sequence derived from alignment at sc0000533:109693..116237- (Clytia hemisphaerica)
ACGTTTGATATCCTTGTCATACCAAGACACCCCTGTCTCAACAGAAATCT
CTAACTTGATACAGAGACATCAAACTAAATCGTTCCCGTCATTTCTCAAT
GTGAAAAAAAACTAAAGAATGCAAAATCAACATGCAGAGCCTTGGAATGC
AGGTTTCGATCAAGCCAGTCAGAACAGTCATACACTTCGACAACAAGGAT
TGCCACCGCAAACTGATGCATCAAGGTTACCAAGTCAGAACCGAGAGGAG
TTTGAGAGATTCCAACGATCAAAAGATNATCACAAACTGATGGACATGCA
TCAAGGTTACCAAGTCAGAACCGAGAGGAGTTTGAGAGATTCCAACGATC
AAAAGATCGAACGTTTTTATGTATGTTAATACTGGTGATTGTCTTCTTAT
TGGGTTCCATTGTATGTGGTGGTGTGGCGGTTGCCATGGTTCCCTGGTGG
AAACACTCTAGAGGTGAGTAAACGGTGTTTTTGCCTAGCTGCCACACCAT
ATTGTTTCAACGTTCATCTTAACGTTGTATGAACGTTAGATGGACATTAA
AATAACAGCTGTGCAAGCTGGGTGACTTTTCAGATCACAGGCATTGTAGA
GCCACATAAAATGGTTCTAGACTTGAGAAAGGTTAACTAAGAATAAAATT
TTTTTGCCTACATTAAGTGTGTTGCGGTAACTTTTCAGTTTATGACTACT
ACAGCCGAGTTGCAAAAACAAGGTTAAGGTAAGATTCAGATGGATTCAAT
TATGAATGACCGTAAACTGAGAATTAATTAGCAAACGTTACAAAGTTCTC
CATACAAAGCACTGTTATAAACTCACTTTCACTTTCAATATCATGTTGTA
ATGTAAAAATATGACACCCCCTTCTCACAGACCCGATGGGGATTGATATT
CCCATACCTTTTGTGGCTGGGGATTTCAATTCTTTTGTTTTCAAGTCAGA
AAATTCAGTGGGGATGGGAAAAATAGCATAGTGTTTCGCAGTGAAATTGG
TTTGTTGGATTATTTTCAGAAGGGACAAATATTGGAGGGTAATTCTCCAC
CGGGATGATTTTTTGGCCAATTTTTCCAGTGGGAAGGGGTCCCAGTTGAT
CTGTGAGAAGGGGTGTAATATGCCATTTTGTTTAACTTTCTAGAAGCACC
AGAAGTTTCAGAATGGATACACATCGGGTTTTGGGAAGCGTGCTTCAAAC
CGGAGCCTGATCAAGATTGGGAATGTAATAAATATACAAATTCAGATACT
TTGCAATCACCAGATTCGTTAGGTAAGAAGAGGTCAAGAAACACTCATCT
CGCAAATGTAATTATACTGGTTTAAGTGTAAAAGCTCGATTGAGTCTAAT
GGGGTTCTACAGATTTCAGAACTATTTGATAAGGCAGATGAAAGCAAATT
GATACTTTCTTTGAACAAGGTTAAAACTCTTACTTGATAAGTTTCCACTC
ATCCTCTTTATACGAAATAAAACTTTTTACTGTACTTCATTTCTAAATAT
GAAGCATAGAGGTCTGCAAATTAGACTACATAATGCTTGACTCCTATCAT
CAAATTGTCACCAAACAATCAATTAATTTTGAAGTGATGCTATATTCACC
AATATCGCTGGAATAGATTAAGACCATGTTCACACGTTACTGTTTCGTTT
CACACTGGTATGATTTTCGTTACGGATCAAGTGTGTTGATTATTGGTTTC
GGAACATTTCGAAGCAAGAAAACGGAGCAGTTCCGTTCCGATGAAAAAAG
TGGAGCGAAACCGTTTCGATCTGTTTTGCGTCTTCTTTTTTAACGTTTCG
AATTTTGGCGTTCACACTTGTTTCGGAACCGTTTCGTTTTGGAACGGAAC
GGAACCATAACGTCTGAACATGGTCTAATTCCTCATTTACAAATCTAATT
CTTAGGCATGGACATTTTGATATCACTATCGCTAGCTGGTATTGGCGTGG
CATTTCTCGCATTGATTTTAACTATTGTGGCATCAATATTCAAGAAATCA
AGATATATACGAGAATTGCTTTTCTCGATTTGTGTACTTTGTTTAATTGG
AGGTAAGTGGTAAATGCATACACGTTTTCTTATAAAAATAAGGGGCGTAC
GGGGTTTGCGATTTCCGAAATACCGAATGATTTTGCTAAAATTTCCGAGA
ATCCGCAAAAAAAACTTGCAATTCCGATACCGATTTTTTTAGGGTATTTT
TCCTCGTTTTGACTAATTTTTCATCAAATTTGTTTTTTCATGTATGAATA
GACGATATCGGCTTAACAAAATTCTCCCCGAATGATTACCCATGATGCAT
TGCACAAAAAAATTCAGTAAGTCAATATAGTCCGTGAATTTTTTTGCGCA
ATGCATCATGGGTAATCATTCGGGGAGAATTCGTTAAGCCGATATCGTCT
ATTCCGAAAAAGGGGGATAAAAACTTTATAATACCGAAATTCCGAAGCAA
AAATTCATGGATTTCTGATACCGAAACAATTTCAGCATTCTGAAATACCA
AAGGAATTTTTCCCGATTTTCGAAACTCCGAAGAAAAAAGGGTTAATTTC
CGCAACTCCGAAATACCGTACGCCCCCACACATATAAGAGCATTAGGCTT
CGATAAGCAAAATATTGTATTTTACAGATGTAGATCTATTTACAAAATTT
CATAGATGATTATCACACAGAAAATCTTATTTTATTTCAGCTGGTTTACT
TGGCTCAGTCATCGGTTTAGTTCTGGACAAAGACAAAGCCGAAAACTTGA
TCCCTCGTGGAATCCAAATCAAAAGCACCGTCACAGGAATAGCAACTCTT
AAACACGCCCTTATGTTCTTCATCATGTGTGGGGCGGGAGGGGCGGTTTT
TATGGCGCTCGTATTTACAGGTGAATAATTTTTTTTTTTAGCAGAAACAG
GGGGTATGAAGCCATAATGTGTAGGTGAAATGTATAACAAACAGGTTCTT
TTGGTTATTGTTTATTCTCTCTATCAAGTCTTAAATTTGTAATGTTTTGG
AGCATTTTTGGGATTATGTTTAAAGCTTGGTTCCCACTGGGCAATAAGAA
GCGATTGAAAGCGACAACCTTTCAAAAGGAAGGGTTGAAGACTAATGCTC
AATATAAAAAGCCATTTGAGAAAGTATTAGTAAAATCTCCATGATGGTTT
TTACTTCATGATTATAGCTGTGATTTTATTCATCCATGATGATGTCGATT
TGAACGATATGAAATATGACAATGATGAAGATTTAAATCTGGAGATGGAT
GAAGACGGCTTCCCTGTCAAAGAGAAAAGACAAGAAAATGACCAGCCAGG
GTAAGCGCCTTCATTACTCAGTTTCAACCTTCAAAATGTAAAGTAAGTAA
ATTTGCGACCGCAGTCCAGGTCGACCCGAAAGCTCCCTTTTCGTATAACT
GTCTACCCGAAGGTAGGGGAGGGCGCCACTTCCCTGGATTTCAGCACTTA
CCCTTGATCCGTCTCTTCAGTTGCTGATCATCAAGCAGAGAGGCATCAAG
TACCATTTTGGGAATCTTTGGTATGACCCAGCTGGGGATCGAACCCACCA
TCTTGCGCACCGTAGCTGGATGCTCTACCTTCATGCTACGGTCGCTACGG
TCGCCCATCAAAATGTATTGTAAACTGTACAATTGTGGCGTAAACACACC
CCCTTCTCACAGGCCTACTGGCAACCCTGCCCACCGGAAAAATATCGTCC
CCAGTGGAAGATTTTACTCTAATTTTTGTTCTCACTGAAAATAATCAAAT
AAACCAATCCTCACTGAAAAATATTATGCTAATTTTCCCATCCCCACTGA
ATTTTCTTGCTCAAAAACAATGGAATTCAAATCCCCAGTCGTGAGCAAAA
TGAGAGTATCAATCCCCATTGAGTTTTGATCCACTATTTTTGCCCCCACT
TGATGAAAAAATCTCACCAGGTCTGTGAGAAGTTGGTGTGTAAACTACAA
AATTCCTTCAGAAAATATTGTTCAGTATCTTTTACAAATCGACCAAGACA
TAACACAAGTTATTTTGTTGTGGAAAGTTGCTAAATCGATCTTATCGGCC
AGGGTGTTATACACTGTGCTAAAAAGTCTAAATATTATGCTTTACTTACA
CTTAAATATCCTGACTTAAAGTCAACAGTTGGACAAAGGACAAAGTCTTT
GAATTTAGAAGTACTGGGATACGCTGGGATGGGTCATTCTTTTTATATCC
ATACAGGGAATATCCACGGAGTAACCATAGAAAAGTTTTCAGGGGGGTCT
AAAAGAGTACTTTTATCGTTCTTCAAGGGGGTAAAAAGTTATTTTAAAAT
TTCCAGGGGGTAAAACACTGACTAATTCGTCCAACCTCACTTTAAGTTAT
GAAAATAAATTTCTCAAGGGATTTGATTGATAAGGTTTGTTCACCCCCTG
TATAGAAGTTTAATGGATCAGCCCAATTACTGACTGTTTCTTAACAGTAA
TCCCGGGCTACTAAATAGATTAAGAACAAATAACACAGAGAGTAATTTGT
TTTAGCCCATCATCGAGATATCTTGACGTGCCAGACATCGGCATGATAGG
GGATGGAAGGCACCACGAAGGAGGGGGCGGAAGACACCACAGCGGAGGAG
GTGGAAGGCACCACAATGGTGAAAGGCGTCAAAAAAGAACAAGCCAAGGT
TCTTATGACGCGCAGTATTCCAATCCATCATTTCACCCACAATTTAATGT
AAGTATAAAAAAATTGTGTCCTGAAATAAACTTTTAAGAACAACATTTTA
TGATGAACAAACGAAGTTGCTAATTACCGTATTATTTCGAATAAACGCCC
CTTCTTTACGCCCCCTCGAATAAACGCCCCTCCTAAAAGGAAAATTATTT
AACAAACACCCCCTCAGATGAACACCTCCTTTCGAAAGAACGCCCCCTCT
AGGGGAGGGGCGTTTATTAGAAACTTGTGACTTAAATACTTTGATACAAG
TTTTGATTAGGATTGAAAAGGAAGATTTTAGTCTTTTTTGTAACCACAGA
TCAGTTTTAACCCTATTCAACCTAGGTTTTTAGGGGCGGTTCAAACCTAG
GGGGGGCTTTTCCTGTACCACCCCTTAACTTTTGATCTAGTGGGTCTTTT
TGGATGAAATTTGGCACATAAGATCCTTGTCACGCAAGGTAACTTTTGAC
AAAAGATTTTTTTGATGACGTCACTCATCATGCCCAAAGTAAGCAAAAAC
CGGAAATTTCCTTTGTTCTTATAAATAGCTATTGTATTCTAACAAAGGCT
TTCGAAAAAAGTTGTCTGAGTTTAAAAGGCTTATATTATCCTGAATATTT
AATAAATTACGGTTTAAACGATATATTTGACATAAAAAATAAATTTGTAT
TGGAAAAGTGTCAATTTTTATGACACCCCACTGCCAGAAATGTCATGCTC
AAGGTGTGAAAATTTTTAGGTGTCAAATTTTTTTTTATTTTGAAGCTAAA
TAGAAGTTAGGAATTTACAGAAAATTTCATGGCAAAAACTCTATTATTTC
AGAAGCTATTACTGATAATTTGACCTCCAAACAGAAACCCCCCCCCCCCC
CCCTAGGCCGATTAGGGTTAATGCAATGTTAGTCGCTGACCCAAAGAAAT
TTGCACTGAAATCCTGGTATAGAACTAAAACAAAGACTAGATTTGCTTTG
AAAAAGTATTCAACGTTAGATTCAAATAATTTAATAAACGCCCCGGGCGT
TTATTCGAAGTAATATGGTAACTCAATATGTGAAAAACTGGACCAAAATG
CAAACTTATTTCTACCCCTCTTTAATCAGTCCAAAATGTGAATTATTGAT
CGCACTCTTTCAAGCTTAAATACAGTAGTGCTTCAGGAATACATTATCGA
TAATTTCTTTATCTTAGATGGGATATGACCACCATTATCAACATCCACGC
CATCCACACCGCCCTTCCTCTCACGCCTCACATGGACGCCCATCTTCTTA
TTACTCTGATAGTTCACGTAATGGACATCGCCCTACGAAACCACCCAGAG
CAAACCGATCACGTGATCCTAGAATGGGCGGTGGGCGGCCAGGAAGTGGC
GATTTCAGAAGTTATGAAGACTATGAAATGTATTTCAACACGCCCTATTA
ATCGAACAATCGAATAATAGACTTTTGACAAAGGAAAAATATTAGGAAAA
AGCGAGATTTTTGAAATCAAATTTAAGTCCTCCCTTGCGTTGGTGTTTGG
ATAAGCAACTGTCTGCTCTCAGAAGCAGCCAATTTCTGTTTAGCAAAATG
TCTGAACGAATTCAGATCATGATGGAGATCCTTATAGTTAAAGAAAAACA
GATATCCGAGAATTCGAACAAGCTTCTCTAGATTTTTTTATTTCTACTCT
CATTCGTGAAAGTGGTATAAAGATCGACTTTAAAAATAAAATGGTCACAA
AATACAATGTGTCTGTCTAAAGAAACGGGGTATCTTAAAATACTCCATTT
GACCGCAAAATAGTTTTCAGGGGGGAATATTATAAGTATTTAAATTTTGT
AGTTGACTGTAAATAGATGCAATAATAAATTGTTTTGTATGATAA

Coding sequence (CDS) from alignment at sc0000533:109693..116237-

>TCONS_00025395 ID=TCONS_00025395|Name=TCONS_00025395|organism=Clytia hemisphaerica|type=CDS|length=10248bp|location=Sequence derived from alignment at sc0000533:109693..116237- (Clytia hemisphaerica)
ATGGGATATGACCACCATTATCAACATCCACGCCATCCACACCGCCCTTC
CTCTCACGCCTCACATGGACGCCCATCTTCTTATTACTCTGATAGTTCAC
GTAATGGACATCGCCCTACGAAACCACCCAGAGCAAACCGATCACGTGAT
CCTAGAATGGGCGGTGGGCGGCCAGGAAGTGGCGATTTCAGAAGTTATGA
AGACTATGAAATGTATTTCAACACGCCCTATTAACCCATCATCGAGATAT
CTTGACGTGCCAGACATCGGCATGATAGGGGATGGAAGGCACCACGAAGG
AGGGGGCGGAAGACACCACAGCGGAGGAGGTGGAAGGCACCACAATGGTG
AAAGGCGTCAAAAAAGAACAAGCCAAGGTTCTTATGACGCGCAGTATTCC
AATCCATCATTTCACCCACAATTTAATCTGTGATTTTATTCATCCATGAT
GATGTCGATTTGAACGATATGAAATATGACAATGATGAAGATTTAAATCT
GGAGATGGATGAAGACGGCTTCCCTGTCAAAGAGAAAAGACAAGAAAATG
ACCAGCCAGGCTGGTTTACTTGGCTCAGTCATCGGTTTAGTTCTGGACAA
AGACAAAGCCGAAAACTTGATCCCTCGTGGAATCCAAATCAAAAGCACCG
TCACAGGAATAGCAACTCTTAAACACGCCCTTATGTTCTTCATCATGTGT
GGGGCGGGAGGGGCGGTTTTTATGGCGCTCGTATTTACAGGCATGGACAT
TTTGATATCACTATCGCTAGCTGGTATTGGCGTGGCATTTCTCGCATTGA
TTTTAACTATTGTGGCATCAATATTCAAGAAATCAAGATATATACGAGAA
TTGCTTTTCTCGATTTGTGTACTTTGTTTAATTGGAGAAGCACCAGAAGT
TTCAGAATGGATACACATCGGGTTTTGGGAAGCGTGCTTCAAACCGGAGC
CTGATCAAGATTGGGAATGTAATAAATATACAAATTCAGATACTTTGCAA
TCACCAGATTCGTTAGGTTACCAAGTCAGAACCGAGAGGAGTTTGAGAGA
TTCCAACGATCAAAAGATCGAACGTTTTTATGTATGTTAATACTGGTGAT
TGTCTTCTTATTGGGTTCCATTGTATGTGGTGGTGTGGCGGTTGCCATGG
TTCCCTGGTGGAAACACTCTAGAGATGCAAAATCAACATGCAGAGCCTTG
GAATGCAGGTTTCGATCAAGCCAGTCAGAACAGTCATACACTTCGACAAC
AAGGATTGCCACCGCAAACTGATGCATCAAGATGGGATATGACCACCATT
ATCAACATCCACGCCATCCACACCGCCCTTCCTCTCACGCCTCACATGGA
CGCCCATCTTCTTATTACTCTGATAGTTCACGTAATGGACATCGCCCTAC
GAAACCACCCAGAGCAAACCGATCACGTGATCCTAGAATGGGCGGTGGGC
GGCCAGGAAGTGGCGATTTCAGAAGTTATGAAGACTATGAAATGTATTTC
AACACGCCCTATTAACCCATCATCGAGATATCTTGACGTGCCAGACATCG
GCATGATAGGGGATGGAAGGCACCACGAAGGAGGGGGCGGAAGACACCAC
AGCGGAGGAGGTGGAAGGCACCACAATGGTGAAAGGCGTCAAAAAAGAAC
AAGCCAAGGTTCTTATGACGCGCAGTATTCCAATCCATCATTTCACCCAC
AATTTAATCTGTGATTTTATTCATCCATGATGATGTCGATTTGAACGATA
TGAAATATGACAATGATGAAGATTTAAATCTGGAGATGGATGAAGACGGC
TTCCCTGTCAAAGAGAAAAGACAAGAAAATGACCAGCCAGGCTGGTTTAC
TTGGCTCAGTCATCGGTTTAGTTCTGGACAAAGACAAAGCCGAAAACTTG
ATCCCTCGTGGAATCCAAATCAAAAGCACCGTCACAGGAATAGCAACTCT
TAAACACGCCCTTATGTTCTTCATCATGTGTGGGGCGGGAGGGGCGGTTT
TTATGGCGCTCGTATTTACAGGCATGGACATTTTGATATCACTATCGCTA
GCTGGTATTGGCGTGGCATTTCTCGCATTGATTTTAACTATTGTGGCATC
AATATTCAAGAAATCAAGATATATACGAGAATTGCTTTTCTCGATTTGTG
TACTTTGTTTAATTGGAGAAGCACCAGAAGTTTCAGAATGGATACACATC
GGGTTTTGGGAAGCGTGCTTCAAACCGGAGCCTGATCAAGATTGGGAATG
TAATAAATATACAAATTCAGATACTTTGCAATCACCAGATTCGTTAGGTT
ACCAAGTCAGAACCGAGAGGAGTTTGAGAGATTCCAACGATCAAAAGATC
GAACGTTTTTATGTATGTTAATACTGGTGATTGTCTTCTTATTGGGTTCC
ATTGTATGTGGTGGTGTGGCGGTTGCCATGGTTCCCTGGTGGAAACACTC
TAGAGATGCAAAATCAACATGCAGAGCCTTGGAATGCAGGTTTCGATCAA
GCCAGTCAGAACAGTCATACACTTCGACAACAAGGATTGCCACCGCAAAC
TGATGCATCAAGATGGGATATGACCACCATTATCAACATCCACGCCATCC
ACACCGCCCTTCCTCTCACGCCTCACATGGACGCCCATCTTCTTATTACT
CTGATAGTTCACGTAATGGACATCGCCCTACGAAACCACCCAGAGCAAAC
CGATCACGTGATCCTAGAATGGGCGGTGGGCGGCCAGGAAGTGGCGATTT
CAGAAGTTATGAAGACTATGAAATGTATTTCAACACGCCCTATTAACCCA
TCATCGAGATATCTTGACGTGCCAGACATCGGCATGATAGGGGATGGAAG
GCACCACGAAGGAGGGGGCGGAAGACACCACAGCGGAGGAGGTGGAAGGC
ACCACAATGGTGAAAGGCGTCAAAAAAGAACAAGCCAAGGTTCTTATGAC
GCGCAGTATTCCAATCCATCATTTCACCCACAATTTAATCTGTGATTTTA
TTCATCCATGATGATGTCGATTTGAACGATATGAAATATGACAATGATGA
AGATTTAAATCTGGAGATGGATGAAGACGGCTTCCCTGTCAAAGAGAAAA
GACAAGAAAATGACCAGCCAGGCTGGTTTACTTGGCTCAGTCATCGGTTT
AGTTCTGGACAAAGACAAAGCCGAAAACTTGATCCCTCGTGGAATCCAAA
TCAAAAGCACCGTCACAGGAATAGCAACTCTTAAACACGCCCTTATGTTC
TTCATCATGTGTGGGGCGGGAGGGGCGGTTTTTATGGCGCTCGTATTTAC
AGGCATGGACATTTTGATATCACTATCGCTAGCTGGTATTGGCGTGGCAT
TTCTCGCATTGATTTTAACTATTGTGGCATCAATATTCAAGAAATCAAGA
TATATACGAGAATTGCTTTTCTCGATTTGTGTACTTTGTTTAATTGGAGA
AGCACCAGAAGTTTCAGAATGGATACACATCGGGTTTTGGGAAGCGTGCT
TCAAACCGGAGCCTGATCAAGATTGGGAATGTAATAAATATACAAATTCA
GATACTTTGCAATCACCAGATTCGTTAGGTTACCAAGTCAGAACCGAGAG
GAGTTTGAGAGATTCCAACGATCAAAAGATCGAACGTTTTTATGTATGTT
AATACTGGTGATTGTCTTCTTATTGGGTTCCATTGTATGTGGTGGTGTGG
CGGTTGCCATGGTTCCCTGGTGGAAACACTCTAGAGATGCAAAATCAACA
TGCAGAGCCTTGGAATGCAGGTTTCGATCAAGCCAGTCAGAACAGTCATA
CACTTCGACAACAAGGATTGCCACCGCAAACTGATGCATCAAGATGGGAT
ATGACCACCATTATCAACATCCACGCCATCCACACCGCCCTTCCTCTCAC
GCCTCACATGGACGCCCATCTTCTTATTACTCTGATAGTTCACGTAATGG
ACATCGCCCTACGAAACCACCCAGAGCAAACCGATCACGTGATCCTAGAA
TGGGCGGTGGGCGGCCAGGAAGTGGCGATTTCAGAAGTTATGAAGACTAT
GAAATGTATTTCAACACGCCCTATTAACCCATCATCGAGATATCTTGACG
TGCCAGACATCGGCATGATAGGGGATGGAAGGCACCACGAAGGAGGGGGC
GGAAGACACCACAGCGGAGGAGGTGGAAGGCACCACAATGGTGAAAGGCG
TCAAAAAAGAACAAGCCAAGGTTCTTATGACGCGCAGTATTCCAATCCAT
CATTTCACCCACAATTTAATCTGTGATTTTATTCATCCATGATGATGTCG
ATTTGAACGATATGAAATATGACAATGATGAAGATTTAAATCTGGAGATG
GATGAAGACGGCTTCCCTGTCAAAGAGAAAAGACAAGAAAATGACCAGCC
AGGCTGGTTTACTTGGCTCAGTCATCGGTTTAGTTCTGGACAAAGACAAA
GCCGAAAACTTGATCCCTCGTGGAATCCAAATCAAAAGCACCGTCACAGG
AATAGCAACTCTTAAACACGCCCTTATGTTCTTCATCATGTGTGGGGCGG
GAGGGGCGGTTTTTATGGCGCTCGTATTTACAGGCATGGACATTTTGATA
TCACTATCGCTAGCTGGTATTGGCGTGGCATTTCTCGCATTGATTTTAAC
TATTGTGGCATCAATATTCAAGAAATCAAGATATATACGAGAATTGCTTT
TCTCGATTTGTGTACTTTGTTTAATTGGAGAAGCACCAGAAGTTTCAGAA
TGGATACACATCGGGTTTTGGGAAGCGTGCTTCAAACCGGAGCCTGATCA
AGATTGGGAATGTAATAAATATACAAATTCAGATACTTTGCAATCACCAG
ATTCGTTAGGTTACCAAGTCAGAACCGAGAGGAGTTTGAGAGATTCCAAC
GATCAAAAGATCGAACGTTTTTATGTATGTTAATACTGGTGATTGTCTTC
TTATTGGGTTCCATTGTATGTGGTGGTGTGGCGGTTGCCATGGTTCCCTG
GTGGAAACACTCTAGAGATGCAAAATCAACATGCAGAGCCTTGGAATGCA
GGTTTCGATCAAGCCAGTCAGAACAGTCATACACTTCGACAACAAGGATT
GCCACCGCAAACTGATGCATCAAGATGGGATATGACCACCATTATCAACA
TCCACGCCATCCACACCGCCCTTCCTCTCACGCCTCACATGGACGCCCAT
CTTCTTATTACTCTGATAGTTCACGTAATGGACATCGCCCTACGAAACCA
CCCAGAGCAAACCGATCACGTGATCCTAGAATGGGCGGTGGGCGGCCAGG
AAGTGGCGATTTCAGAAGTTATGAAGACTATGAAATGTATTTCAACACGC
CCTATTAACCCATCATCGAGATATCTTGACGTGCCAGACATCGGCATGAT
AGGGGATGGAAGGCACCACGAAGGAGGGGGCGGAAGACACCACAGCGGAG
GAGGTGGAAGGCACCACAATGGTGAAAGGCGTCAAAAAAGAACAAGCCAA
GGTTCTTATGACGCGCAGTATTCCAATCCATCATTTCACCCACAATTTAA
TCTGTGATTTTATTCATCCATGATGATGTCGATTTGAACGATATGAAATA
TGACAATGATGAAGATTTAAATCTGGAGATGGATGAAGACGGCTTCCCTG
TCAAAGAGAAAAGACAAGAAAATGACCAGCCAGGCTGGTTTACTTGGCTC
AGTCATCGGTTTAGTTCTGGACAAAGACAAAGCCGAAAACTTGATCCCTC
GTGGAATCCAAATCAAAAGCACCGTCACAGGAATAGCAACTCTTAAACAC
GCCCTTATGTTCTTCATCATGTGTGGGGCGGGAGGGGCGGTTTTTATGGC
GCTCGTATTTACAGGCATGGACATTTTGATATCACTATCGCTAGCTGGTA
TTGGCGTGGCATTTCTCGCATTGATTTTAACTATTGTGGCATCAATATTC
AAGAAATCAAGATATATACGAGAATTGCTTTTCTCGATTTGTGTACTTTG
TTTAATTGGAGAAGCACCAGAAGTTTCAGAATGGATACACATCGGGTTTT
GGGAAGCGTGCTTCAAACCGGAGCCTGATCAAGATTGGGAATGTAATAAA
TATACAAATTCAGATACTTTGCAATCACCAGATTCGTTAGGTTACCAAGT
CAGAACCGAGAGGAGTTTGAGAGATTCCAACGATCAAAAGATCGAACGTT
TTTATGTATGTTAATACTGGTGATTGTCTTCTTATTGGGTTCCATTGTAT
GTGGTGGTGTGGCGGTTGCCATGGTTCCCTGGTGGAAACACTCTAGAGAT
GCAAAATCAACATGCAGAGCCTTGGAATGCAGGTTTCGATCAAGCCAGTC
AGAACAGTCATACACTTCGACAACAAGGATTGCCACCGCAAACTGATGCA
TCAAGATGGGATATGACCACCATTATCAACATCCACGCCATCCACACCGC
CCTTCCTCTCACGCCTCACATGGACGCCCATCTTCTTATTACTCTGATAG
TTCACGTAATGGACATCGCCCTACGAAACCACCCAGAGCAAACCGATCAC
GTGATCCTAGAATGGGCGGTGGGCGGCCAGGAAGTGGCGATTTCAGAAGT
TATGAAGACTATGAAATGTATTTCAACACGCCCTATTAACCCATCATCGA
GATATCTTGACGTGCCAGACATCGGCATGATAGGGGATGGAAGGCACCAC
GAAGGAGGGGGCGGAAGACACCACAGCGGAGGAGGTGGAAGGCACCACAA
TGGTGAAAGGCGTCAAAAAAGAACAAGCCAAGGTTCTTATGACGCGCAGT
ATTCCAATCCATCATTTCACCCACAATTTAATCTGTGATTTTATTCATCC
ATGATGATGTCGATTTGAACGATATGAAATATGACAATGATGAAGATTTA
AATCTGGAGATGGATGAAGACGGCTTCCCTGTCAAAGAGAAAAGACAAGA
AAATGACCAGCCAGGCTGGTTTACTTGGCTCAGTCATCGGTTTAGTTCTG
GACAAAGACAAAGCCGAAAACTTGATCCCTCGTGGAATCCAAATCAAAAG
CACCGTCACAGGAATAGCAACTCTTAAACACGCCCTTATGTTCTTCATCA
TGTGTGGGGCGGGAGGGGCGGTTTTTATGGCGCTCGTATTTACAGGCATG
GACATTTTGATATCACTATCGCTAGCTGGTATTGGCGTGGCATTTCTCGC
ATTGATTTTAACTATTGTGGCATCAATATTCAAGAAATCAAGATATATAC
GAGAATTGCTTTTCTCGATTTGTGTACTTTGTTTAATTGGAGAAGCACCA
GAAGTTTCAGAATGGATACACATCGGGTTTTGGGAAGCGTGCTTCAAACC
GGAGCCTGATCAAGATTGGGAATGTAATAAATATACAAATTCAGATACTT
TGCAATCACCAGATTCGTTAGGTTACCAAGTCAGAACCGAGAGGAGTTTG
AGAGATTCCAACGATCAAAAGATCGAACGTTTTTATGTATGTTAATACTG
GTGATTGTCTTCTTATTGGGTTCCATTGTATGTGGTGGTGTGGCGGTTGC
CATGGTTCCCTGGTGGAAACACTCTAGAGATGCAAAATCAACATGCAGAG
CCTTGGAATGCAGGTTTCGATCAAGCCAGTCAGAACAGTCATACACTTCG
ACAACAAGGATTGCCACCGCAAACTGATGCATCAAGATGGGATATGACCA
CCATTATCAACATCCACGCCATCCACACCGCCCTTCCTCTCACGCCTCAC
ATGGACGCCCATCTTCTTATTACTCTGATAGTTCACGTAATGGACATCGC
CCTACGAAACCACCCAGAGCAAACCGATCACGTGATCCTAGAATGGGCGG
TGGGCGGCCAGGAAGTGGCGATTTCAGAAGTTATGAAGACTATGAAATGT
ATTTCAACACGCCCTATTAACCCATCATCGAGATATCTTGACGTGCCAGA
CATCGGCATGATAGGGGATGGAAGGCACCACGAAGGAGGGGGCGGAAGAC
ACCACAGCGGAGGAGGTGGAAGGCACCACAATGGTGAAAGGCGTCAAAAA
AGAACAAGCCAAGGTTCTTATGACGCGCAGTATTCCAATCCATCATTTCA
CCCACAATTTAATCTGTGATTTTATTCATCCATGATGATGTCGATTTGAA
CGATATGAAATATGACAATGATGAAGATTTAAATCTGGAGATGGATGAAG
ACGGCTTCCCTGTCAAAGAGAAAAGACAAGAAAATGACCAGCCAGGCTGG
TTTACTTGGCTCAGTCATCGGTTTAGTTCTGGACAAAGACAAAGCCGAAA
ACTTGATCCCTCGTGGAATCCAAATCAAAAGCACCGTCACAGGAATAGCA
ACTCTTAAACACGCCCTTATGTTCTTCATCATGTGTGGGGCGGGAGGGGC
GGTTTTTATGGCGCTCGTATTTACAGGCATGGACATTTTGATATCACTAT
CGCTAGCTGGTATTGGCGTGGCATTTCTCGCATTGATTTTAACTATTGTG
GCATCAATATTCAAGAAATCAAGATATATACGAGAATTGCTTTTCTCGAT
TTGTGTACTTTGTTTAATTGGAGAAGCACCAGAAGTTTCAGAATGGATAC
ACATCGGGTTTTGGGAAGCGTGCTTCAAACCGGAGCCTGATCAAGATTGG
GAATGTAATAAATATACAAATTCAGATACTTTGCAATCACCAGATTCGTT
AGGTTACCAAGTCAGAACCGAGAGGAGTTTGAGAGATTCCAACGATCAAA
AGATCGAACGTTTTTATGTATGTTAATACTGGTGATTGTCTTCTTATTGG
GTTCCATTGTATGTGGTGGTGTGGCGGTTGCCATGGTTCCCTGGTGGAAA
CACTCTAGAGATGCAAAATCAACATGCAGAGCCTTGGAATGCAGGTTTCG
ATCAAGCCAGTCAGAACAGTCATACACTTCGACAACAAGGATTGCCACCG
CAAACTGATGCATCAAGATGGGATATGACCACCATTATCAACATCCACGC
CATCCACACCGCCCTTCCTCTCACGCCTCACATGGACGCCCATCTTCTTA
TTACTCTGATAGTTCACGTAATGGACATCGCCCTACGAAACCACCCAGAG
CAAACCGATCACGTGATCCTAGAATGGGCGGTGGGCGGCCAGGAAGTGGC
GATTTCAGAAGTTATGAAGACTATGAAATGTATTTCAACACGCCCTATTA
ACCCATCATCGAGATATCTTGACGTGCCAGACATCGGCATGATAGGGGAT
GGAAGGCACCACGAAGGAGGGGGCGGAAGACACCACAGCGGAGGAGGTGG
AAGGCACCACAATGGTGAAAGGCGTCAAAAAAGAACAAGCCAAGGTTCTT
ATGACGCGCAGTATTCCAATCCATCATTTCACCCACAATTTAATCTGTGA
TTTTATTCATCCATGATGATGTCGATTTGAACGATATGAAATATGACAAT
GATGAAGATTTAAATCTGGAGATGGATGAAGACGGCTTCCCTGTCAAAGA
GAAAAGACAAGAAAATGACCAGCCAGGCTGGTTTACTTGGCTCAGTCATC
GGTTTAGTTCTGGACAAAGACAAAGCCGAAAACTTGATCCCTCGTGGAAT
CCAAATCAAAAGCACCGTCACAGGAATAGCAACTCTTAAACACGCCCTTA
TGTTCTTCATCATGTGTGGGGCGGGAGGGGCGGTTTTTATGGCGCTCGTA
TTTACAGGCATGGACATTTTGATATCACTATCGCTAGCTGGTATTGGCGT
GGCATTTCTCGCATTGATTTTAACTATTGTGGCATCAATATTCAAGAAAT
CAAGATATATACGAGAATTGCTTTTCTCGATTTGTGTACTTTGTTTAATT
GGAGAAGCACCAGAAGTTTCAGAATGGATACACATCGGGTTTTGGGAAGC
GTGCTTCAAACCGGAGCCTGATCAAGATTGGGAATGTAATAAATATACAA
ATTCAGATACTTTGCAATCACCAGATTCGTTAGGTTACCAAGTCAGAACC
GAGAGGAGTTTGAGAGATTCCAACGATCAAAAGATCGAACGTTTTTATGT
ATGTTAATACTGGTGATTGTCTTCTTATTGGGTTCCATTGTATGTGGTGG
TGTGGCGGTTGCCATGGTTCCCTGGTGGAAACACTCTAGAGATGCAAAAT
CAACATGCAGAGCCTTGGAATGCAGGTTTCGATCAAGCCAGTCAGAACAG
TCATACACTTCGACAACAAGGATTGCCACCGCAAACTGATGCATCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014263XLOC_014263Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025395-exon-sc0000533-1575043694:116013..116237TCONS_00025395-exon-sc0000533-1575043694:116013..116237Clytia hemisphaericaexon
TCONS_00025395-exon-sc0000533-1575043694:115775..115932TCONS_00025395-exon-sc0000533-1575043694:115775..115932Clytia hemisphaericaexon
TCONS_00025395-exon-sc0000533-1575043694:114966..115094TCONS_00025395-exon-sc0000533-1575043694:114966..115094Clytia hemisphaericaexon
TCONS_00025395-exon-sc0000533-1575043694:114186..114332TCONS_00025395-exon-sc0000533-1575043694:114186..114332Clytia hemisphaericaexon
TCONS_00025395-exon-sc0000533-1575043694:113368..113547TCONS_00025395-exon-sc0000533-1575043694:113368..113547Clytia hemisphaericaexon
TCONS_00025395-exon-sc0000533-1575043694:112938..113070TCONS_00025395-exon-sc0000533-1575043694:112938..113070Clytia hemisphaericaexon
TCONS_00025395-exon-sc0000533-1575043694:111540..111732TCONS_00025395-exon-sc0000533-1575043694:111540..111732Clytia hemisphaericaexon
TCONS_00025395-exon-sc0000533-1575043694:109693..110370TCONS_00025395-exon-sc0000533-1575043694:109693..110370Clytia hemisphaericaexon
TCONS_00025395-exon-sc0000533-1510915933:116013..116237TCONS_00025395-exon-sc0000533-1510915933:116013..116237Clytia hemisphaericaexon
TCONS_00025395-exon-sc0000533-1510915933:115775..115932TCONS_00025395-exon-sc0000533-1510915933:115775..115932Clytia hemisphaericaexon
TCONS_00025395-exon-sc0000533-1510915933:114966..115094TCONS_00025395-exon-sc0000533-1510915933:114966..115094Clytia hemisphaericaexon
TCONS_00025395-exon-sc0000533-1510915933:114186..114332TCONS_00025395-exon-sc0000533-1510915933:114186..114332Clytia hemisphaericaexon
TCONS_00025395-exon-sc0000533-1510915933:113368..113547TCONS_00025395-exon-sc0000533-1510915933:113368..113547Clytia hemisphaericaexon
TCONS_00025395-exon-sc0000533-1510915933:112938..113070TCONS_00025395-exon-sc0000533-1510915933:112938..113070Clytia hemisphaericaexon
TCONS_00025395-exon-sc0000533-1510915933:111540..111732TCONS_00025395-exon-sc0000533-1510915933:111540..111732Clytia hemisphaericaexon
TCONS_00025395-exon-sc0000533-1510915933:109693..110370TCONS_00025395-exon-sc0000533-1510915933:109693..110370Clytia hemisphaericaexon
TCONS_00025395-exon-sc0000533-1491911889:116013..116237TCONS_00025395-exon-sc0000533-1491911889:116013..116237Clytia hemisphaericaexon
TCONS_00025395-exon-sc0000533-1491911889:115775..115932TCONS_00025395-exon-sc0000533-1491911889:115775..115932Clytia hemisphaericaexon
TCONS_00025395-exon-sc0000533-1491911889:114966..115094TCONS_00025395-exon-sc0000533-1491911889:114966..115094Clytia hemisphaericaexon
TCONS_00025395-exon-sc0000533-1491911889:114186..114332TCONS_00025395-exon-sc0000533-1491911889:114186..114332Clytia hemisphaericaexon
TCONS_00025395-exon-sc0000533-1491911889:113368..113547TCONS_00025395-exon-sc0000533-1491911889:113368..113547Clytia hemisphaericaexon
TCONS_00025395-exon-sc0000533-1491911889:112938..113070TCONS_00025395-exon-sc0000533-1491911889:112938..113070Clytia hemisphaericaexon
TCONS_00025395-exon-sc0000533-1491911889:111540..111732TCONS_00025395-exon-sc0000533-1491911889:111540..111732Clytia hemisphaericaexon
TCONS_00025395-exon-sc0000533-1491911889:109693..110370TCONS_00025395-exon-sc0000533-1491911889:109693..110370Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025395-proteinTCONS_00025395-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000533supercontigsc0000533:109693..116237 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.0245837	0	0	0.0231375	0	0	0.0182965	0	0.0439947	0	23.9128	21.9844	0	0.0264616	0.0162993	0.0835311	40.3679	51.6856	0	0.0307184	0	0	0	0	0.0297717	0	3.51843	2.9218
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR020846MFS_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025395 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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