TCONS_00025481 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025481
Unique NameTCONS_00025481
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1747

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025481 ID=TCONS_00025481|Name=TCONS_00025481|organism=Clytia hemisphaerica|type=transcript|length=1747bp
atttaTTGAACTATTCGTTGAATGTTAATCTAAGTAAGTGTGAtctcgat
ttttcaattttacttgGCAGACACCATGAAGAAGCAATACGTTAGAAata
aaaatcggtttttctcaaacattggAATAATTTATCTACAATATTGGGGT
TTTTGAGGCTGTAAATTTAAACAACTGAAATCTAACAGGATTCAAATTCC
TCGTGATAACACAAATTGTGAATGAGGCGCAATAATGAACTTATTTGTTA
TTGTCTTATTTTCGTTCACTTTGGCGCTTCATTTGTTCATACTTGAAGCC
ACTCATTATTCAATAATCGCATTGCTCGGCCGCCCGACATCATGGGAGGC
CGAATATCATTTAGAAGTGGATTACGATACATGTTGTCAGGAAATGTGTA
GAGCTAACGAGTCGTGTAAATCGTACGATCAAATATGGCAGCCGAGTCGG
GATATCTACGAATGCCGTTTTTACAGTAAAAANCAAATATGGCAGCCGAG
TCGTGATATCTACGAATGCTGTTTTTACAGTAAAACTTATCAAGTCTTAA
AAGCGGAAGGGGAGAAATTGGAGCTGATCCCGAGAGTGCAATATTATTCG
AAAATGCACAAAATGACTAATTGCAGTGATTGGTTCCACAAGGGCGGCGC
AAGAGAAGGTATACCATACAAAATGGTTGATGGCGTACTGGAAGACTGCG
ATTATTCTTTCTTCTCTTGTGACGAAGTTGTCAACAAAGGTCTGCTGGAG
GATAGAATCGAAGCTGTTTTCCCCATCTTCATCTCAGctgTCAACGAGAT
AAAGAACATACGATGTCGAAAATATCATGACAAAGGATGGGTTGTATTCC
AAAAAAGAGTCGAACCGGCAAAATTTCCTTTCAACAAAAAGTCATGGCAA
GAATACAAAGAGGGATTTGAGGAAAGTAAGAACGACTTTTGGCTTGGTAA
CGAATTACTTCATCAATGGACAAAAGACAAGGAGAATGAGCTGTTGATTC
TTCTTGAATACGACGAATATGGCTGGCATGCCGAAAGCCGGCACAGATTC
AACGTTGGTCCGGAAAATACATACTATCAACTATATGTCAGTAATACACC
AAGCTTCGATGTGACCGCAGAAATTCCGGGTTACCGTTCATTCAATTCTA
ATATACACGACTTAGACCGTGGACGATTCCATACTTTTGATAACAATCGT
ACGCAAGAAGGTTGTGCGTCCAAACTGTTCAACGGAGAAGgtATGGCTGG
ATGGATCCAATCTAATGATAAATGCAACGCGAAATGGGTCACCTATTTTA
ACGCTAGAGTTCCCAAAAGATATCGAGACAGTTTTGATGAAGTACAGAAT
TTTCCTGAATCTGTTATGATGTTTcgagaaaaataacaaacacaCTATGC
CTTAAGGAAACTTTTTTTGGCGGGAATAATTTTGGCGGGcagcaaatatc
ctaaaaatttttaattttggcgggaacttattttggcgaatagtgaattt
ttataattttggtggtaaatctgttctattttgccttattttgagcaatt
ttgatgaatttcaggggttatttaggcaaggaaacaaaaaatttattttt
ggcgggaacttattttggcgagtgagcaaaatatttaattttggcgaatt
tcgtctaaattcgccaaatccgccacaattagtttccgccaaaataagtt
cccttaaggtaggagGAAATAATGGCGGGAATTTGAATTGGCAGCGG
Run BLAST on NCBI

protein sequence of TCONS_00025481-protein

>TCONS_00025481-protein ID=TCONS_00025481-protein|Name=TCONS_00025481-protein|organism=Clytia hemisphaerica|type=polypeptide|length=383bp
MNLFVIVLFSFTLALHLFILEATHYSIIALLGRPTSWEAEYHLEVDYDTC
CQEMCRANESCKSYDQIWQPSRDIYECRFYSKXQIWQPSRDIYECCFYSK
TYQVLKAEGEKLELIPRVQYYSKMHKMTNCSDWFHKGGAREGIPYKMVDG
VLEDCDYSFFSCDEVVNKGLLEDRIEAVFPIFISAVNEIKNIRCRKYHDK
GWVVFQKRVEPAKFPFNKKSWQEYKEGFEESKNDFWLGNELLHQWTKDKE
NELLILLEYDEYGWHAESRHRFNVGPENTYYQLYVSNTPSFDVTAEIPGY
RSFNSNIHDLDRGRFHTFDNNRTQEGCASKLFNGEGMAGWIQSNDKCNAK
WVTYFNARVPKRYRDSFDEVQNFPESVMMFREK
Run BLAST on NCBI

transcript from alignment at sc0000536:43550..50077-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025481 ID=TCONS_00025481|Name=TCONS_00025481|organism=Clytia hemisphaerica|type=transcript|length=6528bp|location=Sequence derived from alignment at sc0000536:43550..50077- (Clytia hemisphaerica)
ATTTATTGAACTATTCGTTGAATGTTAATCTAAGTAAGTGTGATCTCGAT
TTTTCAATTTTACTTGGCAGACACCATGAAGAAGCAATACGTTAGAAATA
AAAATCGGTTTTTCTCAAACATTGGAATAATTTATCTACAATATTGGGGT
TTTTGAGGCTGTAAATTTAAACAACTGAAATCTAACAGGATTCAAATTCC
TCGTGATAACACAAATTGTGAATGAGGCGCAATAATGAACTTATTTGTTA
TTGTTNAACTCCTCGTGATAACAAATTGTGAATGAGGCGCAATAATGAAC
TTATTTGTTATTGTCTTATTTTCGTTCACTTTGGCGCTTCATTTGTTCAT
ACTTGAAGCCACTCATTATTCAATAATCGCATTGCTCGGCCGCCCGACAT
CATGGGAGGCCGAATATCATTTAGAAGTGGATTACGATACATGTTGTCAG
GAAATGTGTAGAGCTAACGAGTCGTGTAAATCGTACGATCAAATATGGCA
GCCGAGTCGGGATATCTACGAATGCCGTTTTTACAGTAAAAANCAAATAT
GGCAGCCGAGTCGTGATATCTACGAATGCTGTTTTTACAGTAAAACTTAT
CAAGTCTTAAAAGCGGAAGGGGAGAAATTGGAGCTGATCCCGAGAGTGCA
ATATTATTCGAAAATGCACAAAATGACTAATTGCAGTGATTGGTTCCACA
AGGGCGGCGCAAGAGAAGGTATACCATACAAAATGGTTGATGGCGTACTG
GAAGACTGCGATTATTCTTTCTTCTCTTGTGACGAAGTTGTCAACAAAGG
TCTGCTGGAGGATAGAATCGAAGCTGTTTTCCCCATCTTCATCTCAGGTA
TAGTCATGATTTCTAAATTTTTGTTGTTATAAAGGTAGAATGTCGTTTTT
TGTAATCTCAAGGTCCTGCCGACACACCGGATATACGGGCGCACGCAAAA
TGTCTGCTATCAGATGAGAAAATGTTTTACCATCGGACAGTTCAAACAGC
GGAACACACGTGAATTAATCCAGTGCGTCCGTTGCACGCTAAAACGCAAA
AGAAACAAGTTTGTTATTAGTCCCGTGTCAAGAATATACGTGATGTGAAG
TGAAGTTTTGTAATAATACGTCAGTCTAGTGCGTCGGCAGGGTCATCAAC
GGTCTAGATAATTTAGAATTCACACAACTTCTTTGTAAGCCTTTAACAAT
CACTGTATGCACAATTCACAAACAAATGAATTCGACTCTCTCTAATTCGA
ACTAAAATATTGACTAGAAATTCGTATAAAATACTTTCTCTAATTCGAAG
AAAATTTGTTCTTAGTCCCATGAAGATCGAATTAAAGAGATACAGCTGTA
AATCAACAATAAATTTTCTTTTTAGCTGTCAACGAGATAAAGAACATACG
ATGTCGAAAATATCATGACAAAGGATGGGTTGTATTCCAAAAAAGAGTCG
AACCGGCAAAATTTCCTTTCAACAAAAAGTCATGGCAAGAATACAAAGAG
GGTAAAACATTCACTTTATTACCATTTACTAATTATAATGCCATCAATAC
TTAGAAGACTATAATCAGACTGTATCAGCAGCATATTATAGTACATATTG
TATTTGGAGCTAAAATTCCATCATTTTTTTGCTTATTTTTACCATGTTGG
AATTATTGCTTAACATGCTAAACTATGCGAAATACGGTTTGTTACGAACA
AGAAACAGGTTTGAGCCAGTTTTTGAAAGTAGTAGGGTAATTTGGGAAAT
CTTGGCAGAAAGAGTGACGCCCTTCCTTCGGTAGATAATTATTTTTGACT
TGGACCTCTTTAACTCGAATGTCTCTTTAATCGAAACAACATTTATGGTC
TTTTCAGTTAACAATGCCTTCTTATCTCGAAATTTCTTTTCTTTAACTTA
ACTATCGAACAAATTTGTGTTCCCCGTGCGGAGGCTCAACTTATTGCTTA
TAACACCCCCTCCTCACAGACCCGGTAGGATTTTTTCAGCCAGCAGGGGT
AAATATAACGGATTGAAAGTCGATGGGAATTGAGAATCCCATATCTTTTA
TGACTGGGGGGGGGGTACTAGGGCAAAATGGGTTACGGGAATGCGCCGCT
GGTCAGAGTACCTTTTTTAACCTCCACGAGTCCCAGATAGGGTCGCAAAA
ACACCAAAATAGAAAAATCTGTCCCTCGTAGGGTGCATTTTTTGGAAAAT
TTGGGGGCAAAAATAGAAAATTTGAGACAATTTGAGAATTTCAGTCTCAT
TCAGGGTCACTTTTTTTCGCAAAGTTCGGCAAAATCTTTGAAAAAACGAG
TCCCACTCAGGGTCCATTTTTCGAACCTCAGCGGAGCATCCCTGTCGGTC
GCTAAGGTACTCCCCCGGATCTTTTATGGGATATTAATTCCATTCATATT
TTCAAGTCAGAAAATTCATTGAGAATCTGGTGAAGACATTTTTGACAATT
CTTTCAGTGGTAAAGAACCATCTTTCCCAGTGGGTCTGTGTGAGAAGGGT
TGTCTTATAAAAAAGAGTTACTTTCGTTTTTTAAGGATTTGAGGAAAGTA
AGAACGACTTTTGGCTTGGTAACGAATTACTTCATCAATGGACAAAAGAC
AAGGAGAATGAGCTGTTGATTCTTCTTGAATACGACGAATATGGCTGGCA
TGGTAAGAACATTGGATCAGAATTCAGTGTCATCAGGTTTAATGACACGA
CGAGGGTCAAATGGAGTTTGAACAATTAAGAGTTCATCCATATACAGTTA
AACCTCTGTTATTCGAATCCTTTAAGGACCGAGAATCGTAGGGCCAGGGG
CAAACCAGTCCAATATTTCATCCAACATGATTTTCCAATGTTGGATGAAA
TGTTTGATGGAAAAACTTTCGTTGGATGAAGCAAAAATCAAGGCCGGGGC
AAACCGATCCAACATTTCATCCGACATGACTTGGAAAAAAATGAAAATCC
AAAAAATAAAGAAAAAAGTACCACCAAACCAATCCAACACGAAAAATTAC
ACAATTCAATGAGAGAGCTTCTTTGATCTCGTCGCAAATGTTGGATGAAA
TGTTTGATGGCGATCAAACTTCATCCAACACCGTCCAACACGATTTTTTT
CTTCTTTTTTTGATTTTTCATTGTTTTCCAAAAATTTGAATCGACGCAAA
CCGGTCCAACATTTCATCCAACATCAGAAAAAGGGAATGTTGGATGAAAT
TTTGGATCGGTTTGCCCTAGCCTGTACGAGCTCGAACTGAGTGAGCTTTA
AAATTTTTGGCCTCGTTTTATAAAAAACGACTTTCTTATCGCTCCATTTC
TTTTCTTCTATGAATCTTTATTATGGTAGAGAACAAGTTATAGCTCCGTA
GCAGCTCTAGATCGAAAGTTATGGAAGGATGGTGGAAAACACCATTGAGT
TTAAAGCCCGAAGGGCTAGCGTAGAATCTCTAACCTTTCTCAGGCAAGAA
AAAGTGAAGCCTTAAAAAATGCGCGTATTTTTGACGACAGATTGAATCTA
GCAATTCCTTTGTTTACGATTGATATTTTTTTCGAAATTTAGCGGTAAAT
TTTATTTTCAATCTGTCATTTGTGTAAAAACCAGGCGAGTCGCTCAAGGC
CGCGCAACTTTGGTAGGATTTGGAGATTCGATTCTAGCACTTCGGGCTTA
TACTTCATTGGAAAACACCCTCATTGATAATAAGAGCCCCCACTTGATGA
TAATAATAAGGTTAAACCCGGCACCATTTTTTTGCCATCTAGTGTTTCAT
AAAAGCTATGTGTAGTGCGAGTAAAACACCCTACCCGGAAGCGCTTGGGA
TTCGAACACAGTCTATTGCGGTGCAAGTCTGTGATCGAAACCTTCACACT
ACCAATCGGCATATCTGCAGTGTGTTTATTTATTTTCATGATCAGCCGAA
AGCCGGCACAGATTCAACGTTGGTCCGGAAAATACATACTATCAACTATA
TGTCAGTAATACACCAAGCTTCGATGTGACCGCAGAAATTCCGGGTTACC
GTTCATTCAATTCTAATATACACGACTTAGACCGTGGACGATTCCATACT
TTTGATAACAATCGTACGCAAGAAGGTTGTGCGTCCAAACTGTTCAACGG
AGAAGGTAAGGATTAGCCCGTCTTTGTGTTTTTGAGTTATAGAAACTTGA
TTACATGCTTTTTAATAAGCATACAAAAACAGGCTAGATGATGCTTAGGT
CGAGGGTTCGACAAGGCTGAAAAATGATTATATACCCAAAGCAAAATTTT
TAGGAACATTTTTTGGACATTTTTCCATTTTTACACGTTGACTTTAAAGC
CGTAAGAGCTAGGTTGCAATCTTTAACCTTTCTTAAGCAAGAAAAGCCTT
AAGATTTTATCAACTTTTAAAATAACTGATTGATTCTATCACTTTCTTTG
TTTTTTACGCAACATATTCTCGAAATAAAGTGATAGATTTTAACTTCAAC
ACTTGTGAAAAAACGAAGCGGGTCAAACGTATTCAGATGGGTAAATAGGT
GTTTCCTATCCAAAAGTTACACCTCTACCCCTTCGATGCACAAGCATCAA
ATTAACCGCTAACACAATAAAACTTACCATTGGACATTATAAATTGGGTG
AATTTATATGAAAGTTTTAAAGAATTTTTCGCAGTCGCGGAATGATATTG
TTTTTCTTGGAAATATCACTTTGAATGCTTTATTTCAAAATGTTGTGCAA
AATATTCATTATTTTAGGGTAAGATATTAAAACCGGGGGGGGGGGGGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTTAAAGTTCGGGCGAGA
ATTGCTATTTTAGCACTTCCACTTTCTTCCATTGAATATTTCGATTTTAG
AGGGGTTCGGTGGCTTCTAGGCTATGTTCCAAGCCTTATTCGAGCAAACT
TGTGCTTTTAAATCCTGAGATCCCAAGGTCCTTTTAAGTCTCGTGTTAAA
ACTCAGAGTTAAAGCTCTACTTTCCAACTGTAGTTTAAGGCGCTTAAAAA
TCATTTGTGGTGTTTATAATTTCGCCGGGAAAATCATGATTGTAGTTAGG
CCCGGCAAACAGCGAATTGCGCCGGTCAAAGGCCCGAAAAAAATTACAAA
TCGCCGTTCGGAAAGTTCAGTTCGCCACCTCAAGTACATATTTACGCTAA
TCAATACACTGTGCTTGCGAAGAATTCACCGGCCTAGAATCTAGAAATCG
CCAGAGTTACTTTTTCATTCGCCAGTCTACCAAAAACAAAGCAAAACCCC
TTCAAAGGTGTAAAGGAGCTCTTATGGCGCACTACCATATGGCACCCATT
TGCATAAGAACCCCTATTTTAGGGATTTACTACACAGTCTCCATGCAAAG
TATCATGCCCTTCATTAAAGAAGTTTTACACAGACTTTGAAAAGTCTAAA
TAATATAAGTATTATTTTTTCCCAGGGCTAATTATGTATTAGTTTTAAAC
GGTTTTAAGTGTTGCTATGAATGTATAAATGACCTCGCGAAAGTTTCTAA
TCGCATAAATGAAGTGGCTTTTGTACACCTAGGGTAAACAATTTTAATTT
TTTATATACTTTAGTGAGGAATAACATTTTGCCGATTTAGCGACTTATTG
ATACGGTGGAGTCTCTTTAACTCAATTTTCTCCTTAAATTTGTCTCCCGA
TATCGAGTTAGGGAGACTATATTAAAAAATGTTAGTAAACGTATTTCTTC
AATCATTATTTGCTTTTTCAGGTATGGCTGGATGGATCCAATCTAATGAT
AAATGCAACGCGAAATGGGTCACCTATTTTAACGCTAGAGTTCCCAAAAG
ATATCGAGACAGTTTTGATGAAGTACAGAATTTTCCTGAATCTGTTATGA
TGTTTCGAGAAAAATAACAAACACACTATGCCTTAAGGAAACTTTTTTTG
GCGGGAATAATTTTGGCGGGCAGCAAATATCCTAAAAATTTTTAATTTTG
GCGGGAACTTATTTTGGCGAATAGTGAATTTTTATAATTTTGGTGGTAAA
TCTGTTCTATTTTGCCTTATTTTGAGCAATTTTGATGAATTTCAGGGGTT
ATTTAGGCAAGGAAACAAAAAATTTATTTTTGGCGGGAACTTATTTTGGC
GAGTGAGCAAAATATTTAATTTTGGCGAATTTCGTCTAAATTCGCCAAAT
CCGCCACAATTAGTTTCCGCCAAAATAAGTTCCCTTAAGGTAGGAGGAAA
TAATGGCGGGAATTTGAATTGGCAGCGG

Coding sequence (CDS) from alignment at sc0000536:43550..50077-

>TCONS_00025481 ID=TCONS_00025481|Name=TCONS_00025481|organism=Clytia hemisphaerica|type=CDS|length=5760bp|location=Sequence derived from alignment at sc0000536:43550..50077- (Clytia hemisphaerica)
GTATGGCTGGATGGATCCAATCTAATGATAAATGCAACGCGAAATGGGTC
ACCTATTTTAACGCTAGAGTTCCCAAAAGATATCGAGACAGTTTTGATGA
AGTACAGAATTTTCCTGAATCTGTTATGATGTTTCGAGAAAAATAACCGA
AAGCCGGCACAGATTCAACGTTGGTCCGGAAAATACATACTATCAACTAT
ATGTCAGTAATACACCAAGCTTCGATGTGACCGCAGAAATTCCGGGTTAC
CGTTCATTCAATTCTAATATACACGACTTAGACCGTGGACGATTCCATAC
TTTTGATAACAATCGTACGCAAGAAGGTTGTGCGTCCAAACTGTTCAACG
GAGAAGGATTTGAGGAAAGTAAGAACGACTTTTGGCTTGGTAACGAATTA
CTTCATCAATGGACAAAAGACAAGGAGAATGAGCTGTTGATTCTTCTTGA
ATACGACGAATATGGCTGGCATGCTGTCAACGAGATAAAGAACATACGAT
GTCGAAAATATCATGACAAAGGATGGGTTGTATTCCAAAAAAGAGTCGAA
CCGGCAAAATTTCCTTTCAACAAAAAGTCATGGCAAGAATACAAAGAGGA
TGAACTTATTTGTTATTGTCTTATTTTCGTTCACTTTGGCGCTTCATTTG
TTCATACTTGAAGCCACTCATTATTCAATAATCGCATTGCTCGGCCGCCC
GACATCATGGGAGGCCGAATATCATTTAGAAGTGGATTACGATACATGTT
GTCAGGAAATGTGTAGAGCTAACGAGTCGTGTAAATCGTACGATCAAATA
TGGCAGCCGAGTCGGGATATCTACGAATGCCGTTTTTACAGTAAAAANCA
AATATGGCAGCCGAGTCGTGATATCTACGAATGCTGTTTTTACAGTAAAA
CTTATCAAGTCTTAAAAGCGGAAGGGGAGAAATTGGAGCTGATCCCGAGA
GTGCAATATTATTCGAAAATGCACAAAATGACTAATTGCAGTGATTGGTT
CCACAAGGGCGGCGCAAGAGAAGGTATACCATACAAAATGGTTGATGGCG
TACTGGAAGACTGCGATTATTCTTTCTTCTCTTGTGACGAAGTTGTCAAC
AAAGGTCTGCTGGAGGATAGAATCGAAGCTGTTTTCCCCATCTTCATCTC
AGGTATGGCTGGATGGATCCAATCTAATGATAAATGCAACGCGAAATGGG
TCACCTATTTTAACGCTAGAGTTCCCAAAAGATATCGAGACAGTTTTGAT
GAAGTACAGAATTTTCCTGAATCTGTTATGATGTTTCGAGAAAAATAACC
GAAAGCCGGCACAGATTCAACGTTGGTCCGGAAAATACATACTATCAACT
ATATGTCAGTAATACACCAAGCTTCGATGTGACCGCAGAAATTCCGGGTT
ACCGTTCATTCAATTCTAATATACACGACTTAGACCGTGGACGATTCCAT
ACTTTTGATAACAATCGTACGCAAGAAGGTTGTGCGTCCAAACTGTTCAA
CGGAGAAGGATTTGAGGAAAGTAAGAACGACTTTTGGCTTGGTAACGAAT
TACTTCATCAATGGACAAAAGACAAGGAGAATGAGCTGTTGATTCTTCTT
GAATACGACGAATATGGCTGGCATGCTGTCAACGAGATAAAGAACATACG
ATGTCGAAAATATCATGACAAAGGATGGGTTGTATTCCAAAAAAGAGTCG
AACCGGCAAAATTTCCTTTCAACAAAAAGTCATGGCAAGAATACAAAGAG
GATGAACTTATTTGTTATTGTCTTATTTTCGTTCACTTTGGCGCTTCATT
TGTTCATACTTGAAGCCACTCATTATTCAATAATCGCATTGCTCGGCCGC
CCGACATCATGGGAGGCCGAATATCATTTAGAAGTGGATTACGATACATG
TTGTCAGGAAATGTGTAGAGCTAACGAGTCGTGTAAATCGTACGATCAAA
TATGGCAGCCGAGTCGGGATATCTACGAATGCCGTTTTTACAGTAAAAAN
CAAATATGGCAGCCGAGTCGTGATATCTACGAATGCTGTTTTTACAGTAA
AACTTATCAAGTCTTAAAAGCGGAAGGGGAGAAATTGGAGCTGATCCCGA
GAGTGCAATATTATTCGAAAATGCACAAAATGACTAATTGCAGTGATTGG
TTCCACAAGGGCGGCGCAAGAGAAGGTATACCATACAAAATGGTTGATGG
CGTACTGGAAGACTGCGATTATTCTTTCTTCTCTTGTGACGAAGTTGTCA
ACAAAGGTCTGCTGGAGGATAGAATCGAAGCTGTTTTCCCCATCTTCATC
TCAGGTATGGCTGGATGGATCCAATCTAATGATAAATGCAACGCGAAATG
GGTCACCTATTTTAACGCTAGAGTTCCCAAAAGATATCGAGACAGTTTTG
ATGAAGTACAGAATTTTCCTGAATCTGTTATGATGTTTCGAGAAAAATAA
CCGAAAGCCGGCACAGATTCAACGTTGGTCCGGAAAATACATACTATCAA
CTATATGTCAGTAATACACCAAGCTTCGATGTGACCGCAGAAATTCCGGG
TTACCGTTCATTCAATTCTAATATACACGACTTAGACCGTGGACGATTCC
ATACTTTTGATAACAATCGTACGCAAGAAGGTTGTGCGTCCAAACTGTTC
AACGGAGAAGGATTTGAGGAAAGTAAGAACGACTTTTGGCTTGGTAACGA
ATTACTTCATCAATGGACAAAAGACAAGGAGAATGAGCTGTTGATTCTTC
TTGAATACGACGAATATGGCTGGCATGCTGTCAACGAGATAAAGAACATA
CGATGTCGAAAATATCATGACAAAGGATGGGTTGTATTCCAAAAAAGAGT
CGAACCGGCAAAATTTCCTTTCAACAAAAAGTCATGGCAAGAATACAAAG
AGGATGAACTTATTTGTTATTGTCTTATTTTCGTTCACTTTGGCGCTTCA
TTTGTTCATACTTGAAGCCACTCATTATTCAATAATCGCATTGCTCGGCC
GCCCGACATCATGGGAGGCCGAATATCATTTAGAAGTGGATTACGATACA
TGTTGTCAGGAAATGTGTAGAGCTAACGAGTCGTGTAAATCGTACGATCA
AATATGGCAGCCGAGTCGGGATATCTACGAATGCCGTTTTTACAGTAAAA
ANCAAATATGGCAGCCGAGTCGTGATATCTACGAATGCTGTTTTTACAGT
AAAACTTATCAAGTCTTAAAAGCGGAAGGGGAGAAATTGGAGCTGATCCC
GAGAGTGCAATATTATTCGAAAATGCACAAAATGACTAATTGCAGTGATT
GGTTCCACAAGGGCGGCGCAAGAGAAGGTATACCATACAAAATGGTTGAT
GGCGTACTGGAAGACTGCGATTATTCTTTCTTCTCTTGTGACGAAGTTGT
CAACAAAGGTCTGCTGGAGGATAGAATCGAAGCTGTTTTCCCCATCTTCA
TCTCAGGTATGGCTGGATGGATCCAATCTAATGATAAATGCAACGCGAAA
TGGGTCACCTATTTTAACGCTAGAGTTCCCAAAAGATATCGAGACAGTTT
TGATGAAGTACAGAATTTTCCTGAATCTGTTATGATGTTTCGAGAAAAAT
AACCGAAAGCCGGCACAGATTCAACGTTGGTCCGGAAAATACATACTATC
AACTATATGTCAGTAATACACCAAGCTTCGATGTGACCGCAGAAATTCCG
GGTTACCGTTCATTCAATTCTAATATACACGACTTAGACCGTGGACGATT
CCATACTTTTGATAACAATCGTACGCAAGAAGGTTGTGCGTCCAAACTGT
TCAACGGAGAAGGATTTGAGGAAAGTAAGAACGACTTTTGGCTTGGTAAC
GAATTACTTCATCAATGGACAAAAGACAAGGAGAATGAGCTGTTGATTCT
TCTTGAATACGACGAATATGGCTGGCATGCTGTCAACGAGATAAAGAACA
TACGATGTCGAAAATATCATGACAAAGGATGGGTTGTATTCCAAAAAAGA
GTCGAACCGGCAAAATTTCCTTTCAACAAAAAGTCATGGCAAGAATACAA
AGAGGATGAACTTATTTGTTATTGTCTTATTTTCGTTCACTTTGGCGCTT
CATTTGTTCATACTTGAAGCCACTCATTATTCAATAATCGCATTGCTCGG
CCGCCCGACATCATGGGAGGCCGAATATCATTTAGAAGTGGATTACGATA
CATGTTGTCAGGAAATGTGTAGAGCTAACGAGTCGTGTAAATCGTACGAT
CAAATATGGCAGCCGAGTCGGGATATCTACGAATGCCGTTTTTACAGTAA
AAANCAAATATGGCAGCCGAGTCGTGATATCTACGAATGCTGTTTTTACA
GTAAAACTTATCAAGTCTTAAAAGCGGAAGGGGAGAAATTGGAGCTGATC
CCGAGAGTGCAATATTATTCGAAAATGCACAAAATGACTAATTGCAGTGA
TTGGTTCCACAAGGGCGGCGCAAGAGAAGGTATACCATACAAAATGGTTG
ATGGCGTACTGGAAGACTGCGATTATTCTTTCTTCTCTTGTGACGAAGTT
GTCAACAAAGGTCTGCTGGAGGATAGAATCGAAGCTGTTTTCCCCATCTT
CATCTCAGGTATGGCTGGATGGATCCAATCTAATGATAAATGCAACGCGA
AATGGGTCACCTATTTTAACGCTAGAGTTCCCAAAAGATATCGAGACAGT
TTTGATGAAGTACAGAATTTTCCTGAATCTGTTATGATGTTTCGAGAAAA
ATAACCGAAAGCCGGCACAGATTCAACGTTGGTCCGGAAAATACATACTA
TCAACTATATGTCAGTAATACACCAAGCTTCGATGTGACCGCAGAAATTC
CGGGTTACCGTTCATTCAATTCTAATATACACGACTTAGACCGTGGACGA
TTCCATACTTTTGATAACAATCGTACGCAAGAAGGTTGTGCGTCCAAACT
GTTCAACGGAGAAGGATTTGAGGAAAGTAAGAACGACTTTTGGCTTGGTA
ACGAATTACTTCATCAATGGACAAAAGACAAGGAGAATGAGCTGTTGATT
CTTCTTGAATACGACGAATATGGCTGGCATGCTGTCAACGAGATAAAGAA
CATACGATGTCGAAAATATCATGACAAAGGATGGGTTGTATTCCAAAAAA
GAGTCGAACCGGCAAAATTTCCTTTCAACAAAAAGTCATGGCAAGAATAC
AAAGAGGATGAACTTATTTGTTATTGTCTTATTTTCGTTCACTTTGGCGC
TTCATTTGTTCATACTTGAAGCCACTCATTATTCAATAATCGCATTGCTC
GGCCGCCCGACATCATGGGAGGCCGAATATCATTTAGAAGTGGATTACGA
TACATGTTGTCAGGAAATGTGTAGAGCTAACGAGTCGTGTAAATCGTACG
ATCAAATATGGCAGCCGAGTCGGGATATCTACGAATGCCGTTTTTACAGT
AAAAANCAAATATGGCAGCCGAGTCGTGATATCTACGAATGCTGTTTTTA
CAGTAAAACTTATCAAGTCTTAAAAGCGGAAGGGGAGAAATTGGAGCTGA
TCCCGAGAGTGCAATATTATTCGAAAATGCACAAAATGACTAATTGCAGT
GATTGGTTCCACAAGGGCGGCGCAAGAGAAGGTATACCATACAAAATGGT
TGATGGCGTACTGGAAGACTGCGATTATTCTTTCTTCTCTTGTGACGAAG
TTGTCAACAAAGGTCTGCTGGAGGATAGAATCGAAGCTGTTTTCCCCATC
TTCATCTCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014299XLOC_014299Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025481-exon-sc0000536-1575043694:49852..50077TCONS_00025481-exon-sc0000536-1575043694:49852..50077Clytia hemisphaericaexon
TCONS_00025481-exon-sc0000536-1575043694:49231..49791TCONS_00025481-exon-sc0000536-1575043694:49231..49791Clytia hemisphaericaexon
TCONS_00025481-exon-sc0000536-1575043694:48577..48702TCONS_00025481-exon-sc0000536-1575043694:48577..48702Clytia hemisphaericaexon
TCONS_00025481-exon-sc0000536-1575043694:47426..47542TCONS_00025481-exon-sc0000536-1575043694:47426..47542Clytia hemisphaericaexon
TCONS_00025481-exon-sc0000536-1575043694:45973..46182TCONS_00025481-exon-sc0000536-1575043694:45973..46182Clytia hemisphaericaexon
TCONS_00025481-exon-sc0000536-1575043694:43550..44056TCONS_00025481-exon-sc0000536-1575043694:43550..44056Clytia hemisphaericaexon
TCONS_00025481-exon-sc0000536-1510915933:49852..50077TCONS_00025481-exon-sc0000536-1510915933:49852..50077Clytia hemisphaericaexon
TCONS_00025481-exon-sc0000536-1510915933:49231..49791TCONS_00025481-exon-sc0000536-1510915933:49231..49791Clytia hemisphaericaexon
TCONS_00025481-exon-sc0000536-1510915933:48577..48702TCONS_00025481-exon-sc0000536-1510915933:48577..48702Clytia hemisphaericaexon
TCONS_00025481-exon-sc0000536-1510915933:47426..47542TCONS_00025481-exon-sc0000536-1510915933:47426..47542Clytia hemisphaericaexon
TCONS_00025481-exon-sc0000536-1510915933:45973..46182TCONS_00025481-exon-sc0000536-1510915933:45973..46182Clytia hemisphaericaexon
TCONS_00025481-exon-sc0000536-1510915933:43550..44056TCONS_00025481-exon-sc0000536-1510915933:43550..44056Clytia hemisphaericaexon
TCONS_00025481-exon-sc0000536-1491911889:49852..50077TCONS_00025481-exon-sc0000536-1491911889:49852..50077Clytia hemisphaericaexon
TCONS_00025481-exon-sc0000536-1491911889:49231..49791TCONS_00025481-exon-sc0000536-1491911889:49231..49791Clytia hemisphaericaexon
TCONS_00025481-exon-sc0000536-1491911889:48577..48702TCONS_00025481-exon-sc0000536-1491911889:48577..48702Clytia hemisphaericaexon
TCONS_00025481-exon-sc0000536-1491911889:47426..47542TCONS_00025481-exon-sc0000536-1491911889:47426..47542Clytia hemisphaericaexon
TCONS_00025481-exon-sc0000536-1491911889:45973..46182TCONS_00025481-exon-sc0000536-1491911889:45973..46182Clytia hemisphaericaexon
TCONS_00025481-exon-sc0000536-1491911889:43550..44056TCONS_00025481-exon-sc0000536-1491911889:43550..44056Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025481-proteinTCONS_00025481-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000536supercontigsc0000536:43550..50077 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.241986	0.389778	0.426205	0.47445	0.989727	0.442584	0.689159	0.782415	0.28568	0.378577	0.71796	0.497987	0.161283	0.184005	0.246011	0.245779	0.321779	0.476351	0.325126	0.360185	0.896844	1.11229	1.67637	3.65802	2.71276	4.46838	1.02084	0.828738	0.454409	0.559812
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002181Fibrinogen_a/b/g_C_dom
IPR014716Fibrinogen_a/b/g_C_1
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025481 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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